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Borrelia afzelii, PKo
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Borrelia burgdorferi ZS7, ZS7
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Borrelia burgdorferi, B31
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Borrelia duttonii Ly, Ly
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Borrelia garinii High passage (300), PBi
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Borrelia garinii, PBi
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Borrelia hermsii DAH, DAH
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Borrelia recurrentis A1, A1
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Borrelia turicatae 91E135, 91E135
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Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)
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Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)
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Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197
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Leptospira borgpetersenii serovar Hardjo-bovis L550, L550
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Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
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Leptospira interrogans serovar lai str. 56601
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Treponema denticola ATCC 35405
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Treponema pallidum
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Treponema pallidum subsp. pallidum SS14, SS14
Methods
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Gene lists
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COG functional categories
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Horizontal gene transfer (predicted by SIGI-HMM)
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Sequence similarity search
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Best bidirectional hits (protein-based analysis)
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Gene core sets (protein-based analysis)
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Gene partnerships (DNA-based analysis)
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Protein variations (protein-based analysis)
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Synteny analysis (protein-based analysis)
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Gene conservation (protein-based analysis)
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Codon and amino acid usages (DNA- and protein-based analysis)
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Alignments of whole reference and target genomic elements (DNA-based analysis)
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Leibniz FLI
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Perfect match
2024-03-28 17:42:12
(Clickable) linear whole genome view
Free access
Select genomic element:
Borrelia afzelii PKo
Genomic element
Length
GenBank accession number and version
GenBank release date
PKO-g-P-chrIn1v1.w1
905394 bp
NC_008277.1
2006-07-27
plasmid PKO13310-1f08-a-g.r1
26533 bp
CP000402
.1
2006-07-27
plasmid PKO134-G-p-1.p318
15403 bp
BAPKo_11
.2
2006-07-27
plasmid PKO134-G-p-62.p179
32368 bp
BAPKo_5
.2
2006-07-27
plasmid PKO134-g-a-01h07.f1
59958 bp
BAPKo_2
.2
2006-07-27
plasmid PKO134-g-b-13c07.f1
6847 bp
BAPKo_12
.2
2006-07-27
plasmid PKO134-g-b-19e02.r1
8579 bp
BAPKo_10
.2
2006-07-27
plasmid PKO72-g-a-32h02.s1
24794 bp
BAPKo_9
.2
2006-07-27
plasmid PKO72-g-a-39f06.r1
34273 bp
BAPKo_4
.2
2006-07-27
plasmid PKO72-g-a-43h03.f1
30017 bp
CP000400
.1
2006-07-27
plasmid PKO72-g-a-44e11.f1
59804 bp
BAPKo_3
.2
2006-07-27
plasmid PKO72-g-a-9f08.f1
28533 bp
BAPKo_7
.2
2006-07-27
Borrelia burgdorferi B31
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome
910724 bp
AE000783
.1
2006-01-27
plasmid cp26
26498 bp
AE000792
.1
2006-01-27
plasmid cp32-1
30750 bp
AE001575
.1
2006-01-27
plasmid cp32-3
30223 bp
AE001576
.1
2006-01-27
plasmid cp32-4
30299 bp
AE001577
.1
2006-01-27
plasmid cp32-6
29838 bp
AE001578
.1
2006-01-27
plasmid cp32-7
30800 bp
AE001579
.1
2006-01-27
plasmid cp32-8
30885 bp
AE001580
.1
2006-01-27
plasmid cp32-9
30651 bp
AE001581
.1
2006-01-27
plasmid cp9
9386 bp
AE000791
.1
2006-01-27
plasmid lp17
16823 bp
AE000793
.1
2006-01-27
plasmid lp21
18753 bp
AE001582
.1
2006-01-27
plasmid lp25
24177 bp
AE000785
.1
2006-01-27
plasmid lp28-1
26921 bp
AE000794
.1
2006-01-27
plasmid lp28-2
29766 bp
AE000786
.1
2006-01-27
plasmid lp28-3
28601 bp
AE000784
.1
2006-01-27
plasmid lp28-4
27323 bp
AE000789
.1
2006-01-27
plasmid lp36
36849 bp
AE000788
.1
2006-01-27
plasmid lp38
38829 bp
AE000787
.1
2006-01-27
plasmid lp5
5228 bp
AE001583
.1
2006-01-27
plasmid lp54
53561 bp
AE000790
.1
2006-01-27
plasmid lp56
52971 bp
AE001584
.1
2006-01-27
Borrelia burgdorferi ZS7
Genomic element
Length
GenBank accession number and version
GenBank release date
plasmid ZS7_cp26
26514 bp
CP001212
.1
2008-12-17
plasmid ZS7_cp32-1
30330 bp
CP001206
.1
2008-12-17
plasmid ZS7_cp32-12
29806 bp
CP001200
.1
2008-12-17
plasmid ZS7_cp32-3+10
48168 bp
CP001202
.1
2008-12-17
plasmid ZS7_cp32-4
30964 bp
CP001208
.1
2008-12-17
plasmid ZS7_cp32-9
30467 bp
CP001211
.1
2008-12-17
plasmid ZS7_lp17
17266 bp
CP001204
.1
2008-12-17
plasmid ZS7_lp25
24326 bp
CP001198
.1
2008-12-17
plasmid ZS7_lp28-1
23422 bp
CP001210
.1
2008-12-17
plasmid ZS7_lp28-2
29758 bp
CP001209
.1
2008-12-17
plasmid ZS7_lp28-3
28414 bp
CP001203
.1
2008-12-17
plasmid ZS7_lp28-4
28885 bp
CP001207
.1
2008-12-17
plasmid ZS7_lp36
36852 bp
CP001201
.1
2008-12-17
plasmid ZS7_lp54
53615 bp
CP001199
.1
2008-12-17
chromosome
906707 bp
CP001205
.1
2008-12-17
Borrelia duttonii Ly
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome
931674 bp
CP000976
.1
2008-09-15
plasmid pl11
11226 bp
CP000977
.1
2008-09-15
plasmid pl15
15049 bp
CP000978
.1
2008-09-15
plasmid pl165
163884 bp
CP000979
.1
2008-09-15
plasmid pl23
23303 bp
CP000980
.1
2008-09-15
plasmid pl23b
23036 bp
CP000981
.1
2008-09-15
plasmid pl26
26917 bp
CP000982
.1
2008-09-15
plasmid pl27
27476 bp
CP000983
.1
2008-09-15
plasmid pl28
28343 bp
CP000984
.1
2008-09-15
plasmid pl31
31021 bp
CP000991
.1
2008-09-15
plasmid pl32
31663 bp
CP000992
.1
2008-09-15
plasmid pl35
35286 bp
CP000985
.1
2008-09-15
plasmid pl36
35831 bp
CP000986
.1
2008-09-15
plasmid pl40
40353 bp
CP000987
.1
2008-09-15
plasmid pl41
41259 bp
CP000988
.1
2008-09-15
plasmid pl42
42153 bp
CP000989
.1
2008-09-15
plasmid pl70
66407 bp
CP000990
.1
2008-09-15
Borrelia garinii PBi
Genomic element
Length
GenBank accession number and version
GenBank release date
segment G11a14a06.r1
5617 bp
AY722931.2
2004-09-27
segment G11a14d08.s1
2071 bp
AY722950.2
2004-09-27
segment G11a15e03.s1
11694 bp
AY722923.2
2004-09-27
segment G11a15f12.s1
2008 bp
AY722953.2
2004-09-27
segment G11a15h12.r1
3140 bp
AY722942.2
2004-09-27
segment G11a16d07.r1
6835 bp
AY722927.1
2004-09-27
segment G11a16g12.s1
5490 bp
AY722932.2
2004-09-27
segment G11a17h03.s1
17646 bp
AY722918.2
2004-09-27
segment G11a19d04.r1
2438 bp
AY722946.2
2004-09-27
segment G1M1b07c12.s1
11868 bp
AY722924.2
2004-09-27
segment G1M1b09a03.r1
3972 bp
AY722936.1
2004-09-27
segment G1M1b09g01.s1
13081 bp
AY722922.2
2004-09-27
segment G1M1b11b03.s1
2062 bp
AY722952.2
2004-09-27
segment G1M1b13a11.r1
16203 bp
AY722919.2
2004-09-27
segment G1M1b15c06.r1
2270 bp
AY722951.2
2004-09-27
segment G1Mb03b12.r1
5982 bp
AY722928.1
2004-09-27
segment G1Mb12b07.s1
4109 bp
AY722934.1
2004-09-27
segment G1Mb19g09.r1
2308 bp
AY722947.2
2004-09-27
segment G1Mb28a10.r1
3380 bp
AY722939.2
2004-09-27
segment G1a07d05.r1
9174 bp
AY722925.2
2004-09-27
segment G1a07g11.r1
3306 bp
AY722940.1
2004-09-27
segment G1a08d08.s1
16067 bp
AY722920.1
2004-09-27
segment G1a09h07.r1
7654 bp
AY722926.1
2004-09-27
segment G1a10e03.r1
4050 bp
AY722935.2
2004-09-27
segment G1a13d03.r1
2075 bp
AY722948.2
2004-09-27
segment G1a13d06.s1
2526 bp
AY722945.1
2004-09-27
segment G1a18d09.s1
3140 bp
AY722941.2
2004-09-27
segment G1a18e10.s1
2543 bp
AY722944.2
2004-09-27
segment G1a19c04.r1
5841 bp
AY722929.2
2004-09-27
segment G1a19d06.s1
24477 bp
AY722917.2
2004-09-27
segment G1a22b07.r1
2600 bp
AY722943.2
2004-09-27
segment G1a23g09.r1
3433 bp
AY722938.2
2004-09-27
segment G1a25a05.r1
4649 bp
AY722933.2
2004-09-27
segment G1a34d11.r1
5824 bp
AY722930.2
2004-09-27
segment G1a34h09.s1
14531 bp
AY722921.2
2004-09-27
segment PBil1a03e01.s1
2074 bp
AY722949.1
2004-09-27
segment PBilM1b05c04.r1
3881 bp
AY722937.2
2004-09-27
chromosome linear
904246 bp
CP000013.1
2004-08-27
plasmid cp26
27108 bp
CP000014.1
2004-08-30
plasmid lp54
55560 bp
CP000015.1
2004-08-30
Borrelia garinii High passage (300) PBi
Genomic element
Length
GenBank accession number and version
GenBank release date
segment G1Mb28h10.r1
53707 bp
BGP300_3
.1
2006-08-17
segment G1a22e11.r1
28584 bp
BGP300_6
.1
2006-08-17
segment NC_006156.1
904831 bp
BGP300_1
.1
2006-08-17
segment NT_108227.1
27673 bp
BGP300_8
.1
2006-08-17
segment NT_108230.1
24153 bp
BGP300_9
.1
2006-08-17
segment NT_108238.2
5982 bp
BGP300_13
.1
2006-08-17
segment PBI300PCR17p13
21017 bp
BGP300_12
.1
2006-08-17
segment PBI300a01b12.s1
50192 bp
BGP300_4
.1
2006-08-17
segment PBI300a20b10.r1
58712 bp
BGP300_2
.1
2006-08-17
segment PBI300a21a10.s1
22300 bp
BGP300_10.1
2006-08-17
segment PBI300a34d11.s1
21089 bp
BGP300_11
.1
2006-08-17
segment PBI300d04e03.r1
28219 bp
BGP300_7
.1
2006-08-17
segment PBI300d10f02.r2
31009 bp
BGP300_5
.1
2006-08-17
Borrelia hermsii DAH
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome
922307 bp
CP000048
.1
2008-05-08
Borrelia recurrentis A1
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome
930981 bp
CP000993
.1
2008-09-15
plasmid pl124
123937 bp
CP000994
.1
2008-09-15
plasmid pl23
22945 bp
CP000995
.1
2008-09-15
plasmid pl33
33213 bp
CP000996
.1
2008-09-15
plasmid pl35
35315 bp
CP000997
.1
2008-09-15
plasmid pl37
36869 bp
CP000998
.1
2008-09-15
plasmid pl53
52772 bp
CP000999
.1
2008-09-15
plasmid pl6
6131 bp
CP001000
.1
2008-09-15
Borrelia turicatae 91E135
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome
917330 bp
CP000049
.1
2008-06-05
Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) Patoc 1 (Ames)
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome I
3603977 bp
CP000777
.1
2008-02-13
chromosome II
277995 bp
CP000778
.1
2008-02-13
plasmid p74
74117 bp
CP000779
.1
2008-02-13
Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) Patoc 1 (Paris)
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome I
3599677 bp
CP000786
.1
2008-04-14
chromosome II
277655 bp
CP000787
.1
2008-02-13
plasmid p74
74116 bp
CP000788
.1
2008-02-13
Leptospira borgpetersenii serovar Hardjo-bovis JB197
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome 1
3576473 bp
CP000350
.1
2006-11-17
chromosome 2
299762 bp
CP000351
.1
2006-10-13
Leptospira borgpetersenii serovar Hardjo-bovis L550
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome 1
3614446 bp
CP000348
.1
2006-10-13
chromosome 2
317336 bp
CP000349
.1
2006-10-13
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome I
4277185 bp
AE016823
.1
2004-03-22
chromosome II
350181 bp
AE016824
.1
2004-03-22
Leptospira interrogans serovar lai str. 56601
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome I
4332241 bp
AE010300
.1
2002-10-21
chromosome II
358943 bp
AE010301
.1
2002-10-21
Treponema denticola ATCC 35405
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome
2843201 bp
AE017226
.1
2004-02-03
Treponema pallidum
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome
1138011 bp
AE000520
.1
1999-05-10
Treponema pallidum subsp. pallidum SS14
Genomic element
Length
GenBank accession number and version
GenBank release date
chromosome
1139457 bp
CP000805
.1
2008-05-22