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The Spirochetes Genome Browser (SGB) is aimed at the presentation and analysis of genomic data from spirochetes with an emphasis on genome comparison.
 
Syphilis, Lyme disease, Relapsing fever and Leptospirosis are caused by these bacteria.

 

 

 
SGB offers two basic access modes via either Genomes or Methods.
 leptospira.png
  Leptospira. Courtesy G. Wanner, B. Wilske
Genomes includedAccess #, Size
(chromosomes only)
Genomic elementsCenterReference
Borrelia afzelii, PKoCP000395.1, 0.91 Mbp, chromosome
1 chromosome(s), 9 linear plasmid(s), 2 circular plasmid(s)FLI Jena / GermanyGlöckner et al. 2006
Borrelia burgdorferi ZS7, ZS7CP001205.1, 0.9 Mbp, chromosome
1 chromosome(s), 8 linear plasmid(s), 6 circular plasmid(s)JCVI / USASchutzer et al. 2011
Borrelia burgdorferi, B31AE000783.1, 0.91 Mbp, chromosome
1 chromosome(s), 12 linear plasmid(s), 9 circular plasmid(s)TIGR / USAFraser et al. 1997
Borrelia duttonii Ly, LyCP000976.1, 0.93 Mbp, chromosome
1 chromosome(s), 15 linear plasmid(s), 1 circular plasmid(s)Unité des Rickettsies, Marseille; Marseille-Nice Genopole / FranceLescot et al. 2008
Borrelia garinii High passage (300), PBi13 segment(s)FLI Jena / GermanyGlöckner et al. 2004
Borrelia garinii, PBiCP000013.1, 0.90 Mbp, chromosome
1 chromosome(s), 1 linear plasmid(s), 1 circular plasmid(s), 37 segment(s)FLI Jena / GermanyGlöckner et al. 2004
Borrelia hermsii DAH, DAHCP000048.1, 0.92 Mbp, chromosome
1 chromosome(s)Rocky Mountain Laboratories, NIAID, NIH / USANA
Borrelia recurrentis A1, A1CP000993.1, 0.93 Mbp, chromosome
1 chromosome(s), 7 linear plasmid(s)Unité des Rickettsies, Marseille; Marseille-Nice Genopole / FranceLescot et al. 2008
Borrelia turicatae 91E135, 91E135CP000049.1, 0.91 Mbp, chromosome
1 chromosome(s)Lab. of Human Bacterial Pathenogenesis, Rocky Mountain Laboratories, NIAID / USANA
Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)CP000777.1, 3.6 Mbp, chromosome I
CP000778.1, 0.27 Mbp, chromosome II
2 chromosome(s), 1 circular plasmid(s)Monash Univ., Victoria / AustraliaPicardeau et al. 2008
Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)CP000786.1, 3.59 Mbp, chromosome I
CP000787.1, 0.27 Mbp, chromosome II
2 chromosome(s), 1 circular plasmid(s)Institut Pasteur / FrancePicardeau et al. 2008
Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197CP000350.1, 3.57 Mbp, chromosome 1
CP000351.1, 0.29 Mbp, chromosome 2
2 chromosome(s)Monash Univ., Victoria / AustraliaBulach et al. 2006
Leptospira borgpetersenii serovar Hardjo-bovis L550, L550CP000348.1, 3.61 Mbp, chromosome 1
CP000349.1, 0.31 Mbp, chromosome 2
2 chromosome(s)Monash Univ., Victoria / AustraliaBulach et al. 2006
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130AE016823.1, 4.27 Mbp, chromosome I
AE016824.1, 0.35 Mbp, chromosome II
2 chromosome(s)Institut Pasteur / FranceNascimento et al. 2004
Leptospira interrogans serovar lai str. 56601AE010300.1, 4.33 Mbp, chromosome I
AE010301.1, 0.35 Mbp, chromosome II
2 chromosome(s)Chinese National HGC, Shanghai / ChinaRen et al. 2003
Treponema denticola ATCC 35405AE017226.1, 2.84 Mbp, chromosome
1 chromosome(s)TIGR / USASeshadri et al. 2004
Treponema pallidumAE000520.1, 1.13 Mbp, chromosome
1 chromosome(s)TIGR & University of Texas / USAFraser et al. 1998
Treponema pallidum subsp. pallidum SS14, SS14CP000805.1, 1.13 Mbp, chromosome
1 chromosome(s)Baylor College of Medicine, Houston / USAMatejková et al. 2008

 
The analysis of the genome of B. garinii was published in:

Glöckner G., Lehmann R., Romualdi A., Pradella S., Schulte-Spechtel U., Schilhabel M., Wilske B., Sühnel J., Platzer M. (2004):
Comparative analysis of the Borrelia garinii genome.
Nucleic Acids Res. 32(20):6038-46.

Glöckner G., Schulte-Spechtel U., Schilhabel M., Felder M., Sühnel J., Wilske B., Platzer M. (2006):
Comparative genome analysis: selection pressure on the Borrelia vls cassettes is essential for infectivity.
BMC Genomics 7:211.

 
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