SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Amino acid transport and metabolism
Genomic element: chromosome 2

Number of genes found: 13

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	LBL_4141	Periplasmic protein kinase	chromosome 2	CDS	160306	1053	-	0.439696
NA	LBL_4227	Glutamate synthase domain 2 protein	chromosome 2	CDS	263338	1593	+	0.458883
NA	LBL_4179	Permease	chromosome 2	CDS	205733	1197	-	0.423559
NA	LBL_4061	Periplasmic protein kinase involved in LAO amino acid transport and metabolism	chromosome 2	CDS	65025	951	-	0.454259
argB	LBL_4112	Acetylglutamate kinase	chromosome 2	CDS	128365	876	-	0.442922
aroK	LBL_4121	Shikimate kinase	chromosome 2	CDS	139655	540	-	0.403704
asd	LBL_4269	Aspartate-semialdehyde dehydrogenase	chromosome 2	CDS	305714	1050	-	0.431429
csdB	LBL_4147	Selenocysteine lyase	chromosome 2	CDS	168197	1158	+	0.405872
kamA	LBL_4236	Lysine 2,3-aminomutase	chromosome 2	CDS	272491	1113	+	0.415993
metF	LBL_4004	5,10-methylenetetrahydrofolate reductase	chromosome 2	CDS	5538	873	+	0.404353
metH	LBL_4107	Methionine synthase	chromosome 2	CDS	119519	3744	+	0.453526
speD	LBL_4244	Adenosylmethionine decarboxylase	chromosome 2	CDS	278965	387	-	0.426357
speE	LBL_4242	Spermidine synthase	chromosome 2	CDS	277156	843	-	0.455516