SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Nucleotide transport and metabolism
Genomic element: chromosome

Number of genes found: 22

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_248	rdgB/HAM1 protein	chromosome	CDS	265848	600	+	0.23
NA	BDU_726	adenylyl cyclase, CyaB-type, putative	chromosome	CDS	773803	522	-	0.178161
NA	BDU_310	uncharacterized conserved protein	chromosome	CDS	329487	831	-	0.20698
NA	BDU_831	cytidylate kinase	chromosome	CDS	888473	540	+	0.264815
adk	BDU_411	adenylate kinase	chromosome	CDS	440814	642	+	0.277259
apt	BDU_782	adenine phosphoribosyltransferase	chromosome	CDS	833341	561	+	0.327986
cdd	BDU_621	cytidine deaminase	chromosome	CDS	657746	456	-	0.287281
cmk	BDU_132	cytidylate kinase	chromosome	CDS	136208	657	-	0.266362
dck	BDU_239	deoxyguanosine/deoxyadenosine kinase(I) subunit 2	chromosome	CDS	255667	621	-	0.257649
hpt	BDU_418	hypoxanthine phosphoribosyltransferase	chromosome	CDS	452266	525	+	0.268571
ndk	BDU_466	nucleoside-diphosphate kinase	chromosome	CDS	497714	582	+	0.309278
nucA	BDU_404	endonuclease precursor	chromosome	CDS	434055	885	+	0.262147
pfs-1	BDU_370	5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase	chromosome	CDS	398706	714	+	0.289916
pkcI	BDU_373	protein kinase C1 inhibitor	chromosome	CDS	401204	432	-	0.268519
prs	BDU_546	phosphoribosyl pyrophosphate synthetase	chromosome	CDS	569473	1221	+	0.305487
purA	BDU_419	adenylosuccinate synthase	chromosome	CDS	452800	1284	+	0.290498
purB	BDU_420	adenylosuccinate lyase	chromosome	CDS	454068	1395	+	0.28172
pyrG	BDU_579	CTP synthase	chromosome	CDS	605485	1656	+	0.312802
smbA	BDU_575	uridylate kinase	chromosome	CDS	601530	690	-	0.268116
tdk	BDU_798	thymidine kinase	chromosome	CDS	846216	1107	+	0.262873
tmk	BDU_800	thymidylate kinase	chromosome	CDS	847980	609	-	0.252874
udk	BDU_21	uridine kinase	chromosome	CDS	26719	621	-	0.285024