SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Carbohydrate transport and metabolism
Genomic element: chromosome 2

Number of genes found: 9

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	LBL_4189	Nucleoside-diphosphate sugar epimerase	chromosome 2	CDS	218729	1893	-	0.430005
NA	LBL_4099	Polysaccharide deacetylase	chromosome 2	CDS	111446	1485	-	0.396633
NA	LBL_4232	Aldolase/epimerase	chromosome 2	CDS	268756	753	-	0.422311
NA	LBL_4179	Permease	chromosome 2	CDS	205733	1197	-	0.423559
NA	LBL_4224	Sugar permease (arabinose polymer)	chromosome 2	CDS	259201	1215	-	0.431276
NA	LBL_4102	Sugar phosphatase	chromosome 2	CDS	115011	777	+	0.415701
gpmB	LBL_4208	Phosphoglycerate mutase	chromosome 2	CDS	240662	780	+	0.40641
pfkA	LBL_4110	6-phosphofructokinase	chromosome 2	CDS	125004	1335	+	0.442697
pykF	LBL_4267	Pyruvate kinase	chromosome 2	CDS	302250	1455	-	0.461168