SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Lipid transport and metabolism
Genomic element: chromosome II

Number of genes found: 13

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira interrogans serovar lai str. 56601

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
LB034		3-oxoacyl-(acyl carrier protein) reductase	chromosome II	CDS	27247	756	+	0.399471
LB041		3-oxoacyl-(acyl carrier protein) reductase	chromosome II	CDS	31683	825	+	0.357576
LB068		fatty acid desaturase	chromosome II	CDS	55772	822	+	0.377129
LB082		3-ketoacyl-acyl carrier protein reductase	chromosome II	CDS	72749	765	+	0.422222
LB113		3-oxoacyl-(acyl carrier protein) reductase	chromosome II	CDS	107290	843	+	0.345196
LB121		3-oxoacyl-(acyl carrier protein) reductase	chromosome II	CDS	116308	813	+	0.376384
LB291		3-oxoacyl-[acyl-carrier protein] reductase	chromosome II	CDS	291637	699	-	0.399142
LB318		hypothetical protein	chromosome II	CDS	312297	1146	+	0.334206
acp		acyl carrier protein	chromosome II	CDS	74006	234	+	0.418803
fadD		probable long-chain-fatty-acid--CoA ligase	chromosome II	CDS	82392	1938	-	0.364809
mcm2		methylmalonyl-CoA mutase	chromosome II	CDS	270216	1881	+	0.41361
mcm2		methylmalonyl-CoA mutase	chromosome II	CDS	62957	2013	-	0.413313
mcm3		methylmalonyl-CoA mutase	chromosome II	CDS	272093	2199	+	0.436562