SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Transcription
Genomic element: chromosome 2

Number of genes found: 11

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	LBL_4001	ParB-like protein	chromosome 2	CDS	875	846	+	0.353428
NA	LBL_4219	RNA polymerase sigma subunit	chromosome 2	CDS	253444	522	-	0.386973
NA	LBL_4259	Response regulator	chromosome 2	CDS	295938	726	+	0.422865
NA	LBL_4072	Transcriptional regulator, AcrR-family	chromosome 2	CDS	81214	696	-	0.363506
NA	LBL_4076	AraC-family transcriptional regulator	chromosome 2	CDS	85508	1140	-	0.37807
NA	LBL_4073	AraC-family transcriptional regulator	chromosome 2	CDS	81958	1203	-	0.33084
NA	LBL_4021	ParB-like protein	chromosome 2	CDS	23518	708	+	0.412429
NA	LBL_4111	Serine phosphatase RsbU, regulator of sigma subunit	chromosome 2	CDS	126453	1749	-	0.408805
NA	LBL_4085	Regulator of sigma subunit	chromosome 2	CDS	94982	1485	-	0.40404
NA	LBL_4013	Response regulator of a two component regulatory system	chromosome 2	CDS	14693	693	+	0.445887
NA	LBL_4253	Transcriptional regulator, AcrR-family	chromosome 2	CDS	289596	699	+	0.420601