SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Cell wall/membrane biogenesis
Genomic element: chromosome II

Number of genes found: 12

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira interrogans serovar lai str. 56601

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
LB087		conserved hypothetical protein	chromosome II	CDS	77080	882	+	0.357143
LB137		hypothetical protein	chromosome II	CDS	131177	999	-	0.309309
LB146		conserved hypothetical protein	chromosome II	CDS	141064	648	+	0.304012
LB170		similar to capsular polysaccharide biosynthesis protein	chromosome II	CDS	165785	1890	+	0.384656
LB181		putative protein	chromosome II	CDS	176650	1233	-	0.3382
LB208		alginate o-acetyltransferase	chromosome II	CDS	200811	1413	+	0.335456
LB210		alginate o-acetyltransferase	chromosome II	CDS	203395	1398	+	0.345494
LB283		TonB protein	chromosome II	CDS	282505	651	+	0.387097
LB317		alanine racemase	chromosome II	CDS	311077	1170	+	0.389744
LB323		lytic transglycosylase	chromosome II	CDS	319149	618	+	0.380259
LB359		alginate O-acetylation protein	chromosome II	CDS	348694	1464	-	0.340847
mtfA		mannosyltransferase A	chromosome II	CDS	197202	1143	+	0.35958