SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: NOT ANALYZED
Genomic element: chromosome 2

Number of genes found: 35

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	LBL_4082		chromosome 2	pseudo	90458	1100	+	0.392727
NA	LBL_4157		chromosome 2	pseudo	181463	555	-	0.43964
NA	LBL_4211		chromosome 2	pseudo	245484	432	+	0.412037
NA	LBL_4097		chromosome 2	pseudo	109214	1445	-	0.439446
NA			chromosome 2	repeat_region	246056	1460	-	0.389726
NA	LBL_4149		chromosome 2	pseudo	170980	378	-	0.391534
NA	LBL_4266		chromosome 2	pseudo	299824	1669	-	0.399641
NA			chromosome 2	repeat_region	88995	1471	-	0.39361
NA			chromosome 2	repeat_region	180024	1469	+	0.393465
NA	LBL_4077		chromosome 2	pseudo	86921	1131	-	0.352785
NA			chromosome 2	repeat_region	136133	1465	-	0.390444
NA	LBL_4209		chromosome 2	pseudo	241442	930	+	0.407527
NA			chromosome 2	repeat_region	79030	1471	+	0.39361
NA	LBL_4091		chromosome 2	pseudo	100497	1386	+	0.435786
NA	LBL_4024		chromosome 2	pseudo	26478	677	+	0.410635
NA	LBL_4055		chromosome 2	pseudo	57941	984	-	0.418699
NA	LBL_4151		chromosome 2	pseudo	173297	1383	+	0.428778
NA	LBL_4078		chromosome 2	pseudo	89280	1095	-	0.392694
NA	LBL_4118		chromosome 2	pseudo	134878	814	+	0.427518
NA	LBL_4096		chromosome 2	pseudo	106286	2938	+	0.418312
NA	LBL_4069		chromosome 2	pseudo	77011	1362	+	0.36931
NA			chromosome 2	repeat_region	241449	1202	+	0.399334
NA	LBL_4095		chromosome 2	pseudo	105596	315	-	0.428571
NA	LBL_4026		chromosome 2	pseudo	28727	792	-	0.333333
NA			chromosome 2	repeat_region	241397	49	+	0.510204
NA	LBL_4090		chromosome 2	pseudo	99701	558	+	0.376344
NA	LBL_4215		chromosome 2	pseudo	250047	555	+	0.409009
NA	LBL_4041		chromosome 2	pseudo	43774	919	-	0.330794
NA	LBL_4088		chromosome 2	pseudo	98285	1131	-	0.390805
NA			chromosome 2	repeat_region	171841	1464	-	0.39276
NA	LBL_4249		chromosome 2	pseudo	284630	800	+	0.39625
NA	LBL_4148		chromosome 2	pseudo	169799	972	+	0.409465
NA	LBL_4075		chromosome 2	pseudo	84215	1140	+	0.388597
NA	LBL_4225		chromosome 2	pseudo	260506	1268	+	0.457413
pstS	LBL_4235		chromosome 2	pseudo	271318	905	+	0.41989