SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome II

Number of genes found: 10

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira interrogans serovar lai str. 56601

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
LB078		TPR-repeat-containing protein	chromosome II	CDS	68865	1074	-	0.334264
LB091		hypothetical protein	chromosome II	CDS	81632	240	-	0.329167
LB117		bacterioferritin comigratory protein	chromosome II	CDS	110807	492	-	0.371951
LB177		putative serine protease	chromosome II	CDS	172166	1515	+	0.367657
LB178		putative serine protease	chromosome II	CDS	173695	1584	+	0.35101
LB216		conserved hypothetical protein	chromosome II	CDS	209350	1761	+	0.401476
LB258		Cysteine protease	chromosome II	CDS	254727	2400	+	0.390833
htpG2		heat shock protein HtpG	chromosome II	CDS	47847	1824	+	0.371162
htpX		heat shock protein	chromosome II	CDS	170186	888	+	0.413288
lonA		putative ATP-dependent protease LA	chromosome II	CDS	192835	1623	-	0.375231