SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Posttranslational modification, protein turnover, chaperones
Genomic element: chromosome 2

Number of genes found: 8

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	LBL_4114	Protease	chromosome 2	CDS	130205	1722	-	0.4036
NA	LBL_4115	Bacterioferritin comigratory protein	chromosome 2	CDS	131927	480	-	0.408333
NA	LBL_4065	Phage-related protein	chromosome 2	CDS	71147	1476	+	0.336043
NA	LBL_4049	HSP90	chromosome 2	CDS	52375	1812	+	0.411148
NA	LBL_4184	Trypsin-like serine protease	chromosome 2	CDS	213256	1509	-	0.419483
NA	LBL_4171	ATP-dependent protease	chromosome 2	CDS	195791	1623	+	0.431916
NA	LBL_4183	Trypsin-like serine protease	chromosome 2	CDS	211658	1584	-	0.397727
htpX	LBL_4186	Zn-dependent protease with chaperone function	chromosome 2	CDS	215528	888	-	0.441441