SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Secondary metabolites biosynthesis, transport and catabolism
Genomic element: chromosome II

Number of genes found: 8

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	LEPBI_II0198	Putative short-chain dehydrogenase/reductase SDR	chromosome II	CDS	201374	738	-	0.428184
NA	LEPBI_II0199	Putative 3-oxoacyl-[acyl-carrier protein] reductase	chromosome II	CDS	202117	738	-	0.421409
NA	LEPBI_II0211	Putative 3-oxoacyl-[acyl-carrier protein] reductase	chromosome II	CDS	212716	810	-	0.479012
NA	LEPBI_II0017	Conserved hypothetical protein	chromosome II	CDS	20654	543	-	0.372007
NA	LEPBI_II0087	Putative acriflavine resistance protein D; putative transmembrane protein	chromosome II	CDS	83858	3204	+	0.439451
NA	LEPBI_II0186	Putative transcriptional regulator, ArsR family/methyltransferase	chromosome II	CDS	185456	963	-	0.419522
NA	LEPBI_II0247	Conserved hypothetical protein	chromosome II	CDS	235884	681	-	0.362702
NA	LEPBI_II0174	Hypothetical protein	chromosome II	CDS	173326	1020	-	0.358824