TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerExternal links spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-06-28 04:49:46

Gene list

Applied filters:

COG category: General function prediction only
Genomic element: chromosome

Number of genes found: 113

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema pallidum
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
TP0004 T. pallidum predicted coding region TP0004RecName: Full=Uncharacterized protein TP_0004; chromosome CDS3827 438 + 0.47032
TP0017 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS18404 948 + 0.482068
TP0023 sodium- and chloride- dependent transporterRecName: Full=Transporter; chromosome CDS27557 1332 + 0.474474
TP0025 conserved hypothetical proteinSubName: Full=M16C subfamily peptidase; SubName: Full=Uncharacterized protein; chromosome CDS29857 3072 - 0.503906
TP0027 hemolysin, putativeSubName: Full=Hemolysin, putative; SubName: Full=Putative hemolysin HlyC; chromosome CDS34205 1224 + 0.513889
TP0028 hemolysin, putativeSubName: Full=Hemolysin, putative; SubName: Full=Putative hemolysin HlyC; chromosome CDS35442 1362 + 0.490455
TP0037 D-specific D-2-hydroxyacid dehydrogenaseRecName: Full=D-lactate dehydrogenase; Short=D-LDH; EC=1.1.1.28; AltName: Full=D-specific 2-hydroxyacid dehydrogenase; chromosome CDS44562 996 - 0.51506
TP0038 regulatory protein (pfoS/R)SubName: Full=Putative regulatory protein PfoR; SubName: Full=Regulatory protein (PfoS/R); chromosome CDS45654 1053 - 0.54226
TP0050 conserved hypothetical proteinSubName: Full=Putative phosphoribosyltransferase; SubName: Full=Uncharacterized protein; chromosome CDS58819 609 - 0.533662
TP0067 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS72649 1182 + 0.503384
TP0068 conserved hypothetical proteinRecName: Full=Probable dual-specificity RNA methyltransferase RlmN; EC=2.1.1.-; EC=2.1.1.192; AltName: Full=23S rRNA (adenine(2503)-C(2))-methyltransferase; AltName: Full=23S rRNA m2A2503 methyltransferase; AltName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=tRNA (adenine(37)-C(2))-methyltransferase; AltName: Full=tRNA m2A37 methyltransferase; chromosome CDS74011 1023 + 0.531769
TP0095 T. pallidum predicted coding region TP0095RecName: Full=TPR repeat-containing protein TP_0095; chromosome CDS103889 1947 + 0.566513
TP0123 T. pallidum predicted coding region TP0123RecName: Full=TPR repeat-containing protein TP_0123; chromosome CDS142987 2571 + 0.488915
TP0156 conserved hypothetical proteinSubName: Full=Putative 4-hydroxybenzoyl-CoA thioesterase; EC=3.1.2.23; SubName: Full=Uncharacterized protein; chromosome CDS178285 405 - 0.511111
TP0158 conserved hypothetical proteinSubName: Full=HAD-superfamily hydrolase; SubName: Full=Uncharacterized protein; chromosome CDS179585 687 - 0.487627
TP0173 T. pallidum predicted coding region TP0173RecName: Full=Uncharacterized protein TP_0173; chromosome CDS192132 684 - 0.508772
TP0228 biotin synthase, putativeRecName: Full=Probable biotin transporter BioY; chromosome CDS236642 816 - 0.556373
TP0245 T. pallidum predicted coding region TP0245RecName: Full=Uncharacterized protein TP_0245; chromosome CDS254377 3456 + 0.519965
TP0246 T. pallidum predicted coding region TP0246RecName: Full=Uncharacterized protein TP_0246; chromosome CDS257978 1794 + 0.464883
TP0261 catabolite gene activator, putativeSubName: Full=Catabolite gene activator, putative; SubName: Full=Cyclic nucleotide-binding protein; chromosome CDS272318 1044 + 0.545019
TP0268 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS283919 654 + 0.582569
TP0282 T. pallidum predicted coding region TP0282RecName: Full=TPR repeat-containing protein TP_0282; chromosome CDS297097 720 + 0.594444
TP0285 T. pallidum predicted coding region TP0285RecName: Full=Uncharacterized protein TP_0285; chromosome CDS299177 1080 + 0.487963
TP0289 T. pallidum predicted coding region TP0289SubName: Full=Uncharacterized protein; chromosome CDS302153 1605 + 0.480997
TP0290 conserved hypothetical protein chromosome CDS303812 834 + 0.464029
TP0298 exported protein (tpn38b)RecName: Full=Membrane lipoprotein TpN38(b); Flags: Precursor; chromosome CDS311131 1032 + 0.54845
TP0300 ribose/galactose ABC transporter, ATP-binding protein (rbsA-1)SubName: Full=Ribose/galactose ABC transporter, ATP-binding protein (RbsA-1); chromosome CDS312368 1551 + 0.533204
TP0301 conserved hypothetical integral membrane proteinSubName: Full=Conserved hypothetical integral membrane protein; SubName: Full=Sugar ABC superfamily ATP binding cassette transporter, membrane protein; chromosome CDS313915 1134 + 0.507937
TP0302 conserved hypothetical integral membrane proteinSubName: Full=Conserved hypothetical integral membrane protein; SubName: Full=Sugar ABC superfamily ATP binding cassette transporter, membrane protein; chromosome CDS315039 942 + 0.55414
TP0319 membrane lipoprotein (tmpC)RecName: Full=Membrane lipoprotein TmpC; Short=Membrane protein C; AltName: Full=35 kDa antigen; AltName: Full=Lipoprotein TpN35; AltName: Full=Purine nucleoside receptor A; Short=PnrA; Flags: Precursor; chromosome CDS334823 1062 + 0.543315
TP0321 ribose/galactose ABC transporter, ATP-binding protein (rbsA-2)SubName: Full=Ribose/galactose ABC transporter, ATP-binding protein (RbsA-2); SubName: Full=Sugar ABC superfamily ATP binding cassette transporter, ABC protein; chromosome CDS336125 1602 + 0.568664
TP0322 ribose/galactose ABC transporter, permease protein (rbsC-1)SubName: Full=Ribose/galactose ABC transporter, permease protein (RbsC-1); SubName: Full=Sugar ABC superfamily ATP binding cassette transporter, membrane protein; chromosome CDS337636 1203 + 0.553616
TP0323 ribose/galactose ABC transporter, permease protein (rbsC-2)SubName: Full=Ribose/galactose ABC transporter, permease protein (RbsC-2); SubName: Full=Sugar ABC superfamily ATP binding cassette transporter, membrane protein; chromosome CDS338835 951 + 0.53102
TP0335 T. pallidum predicted coding region TP0335RecName: Full=Uncharacterized protein TP_0335; chromosome CDS357588 543 - 0.578269
TP0356 RNA-binding protein, putativeSubName: Full=Putative RNA-binding protein; SubName: Full=RNA-binding protein, putative; chromosome CDS379151 318 + 0.477987
TP0374 T. pallidum predicted coding region TP0374RecName: Full=Uncharacterized protein TP_0374; chromosome CDS397795 2376 + 0.542929
TP0392 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS416707 960 + 0.50625
TP0407 phosphoglycolate phosphatase (gph-1)SubName: Full=Phosphoglycolate phosphatase (Gph-1); chromosome CDS430960 675 + 0.561481
TP0419 survival protein, putativeRecName: Full=5-nucleotidase SurE; EC=3.1.3.5; AltName: Full=Nucleoside 5-monophosphate phosphohydrolase; chromosome CDS446931 564 + 0.585106
TP0434 T. pallidum predicted coding region TP0434SubName: Full=Uncharacterized protein; chromosome CDS461245 684 + 0.597953
TP0436 conserved hypothetical proteinSubName: Full=DHH superfamily phosphoesterase; SubName: Full=Uncharacterized protein; chromosome CDS462626 1083 - 0.590951
TP0445 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (thiJ)SubName: Full=4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (ThiJ); SubName: Full=DJ-1 family protein; chromosome CDS471477 630 + 0.595238
TP0447 T. pallidum predicted coding region TP0447RecName: Full=Uncharacterized protein TP_0447; Flags: Precursor; chromosome CDS473359 1125 + 0.505778
TP0449 T. pallidum predicted coding region TP0449RecName: Full=Uncharacterized lipoprotein TP_0449; Flags: Precursor; chromosome CDS475627 591 + 0.441624
TP0460 T. pallidum predicted coding region TP0460SubName: Full=Uncharacterized protein; chromosome CDS489768 708 + 0.590395
TP0464 conserved hypothetical proteinRecName: Full=tRNA (guanine-N(7)-)-methyltransferase; EC=2.1.1.33; AltName: Full=tRNA (guanine(46)-N(7))-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase; chromosome CDS492278 753 - 0.616202
TP0468 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS495210 531 - 0.568738
TP0469 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS495698 1464 - 0.576503
TP0470 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS497154 1110 - 0.625225
TP0489 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS523859 969 + 0.485036
TP0491 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS525019 1035 + 0.520773
TP0494 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS529736 822 + 0.520681
TP0496 conserved hypothetical proteinSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS530887 990 + 0.533333
TP0502 T. pallidum predicted coding region TP0502RecName: Full=Putative ankyrin repeat-containing protein TP_0502; chromosome CDS537493 897 + 0.506132
TP0516 virulence factor (mviN)RecName: Full=Protein MurJ homolog; chromosome CDS556327 1581 - 0.418722
TP0522 T. pallidum predicted coding region TP0522RecName: Full=Uncharacterized protein TP_0522; chromosome CDS563018 480 - 0.45625
TP0541 GTP-binding protein (era)RecName: Full=GTPase Era; chromosome CDS582189 960 + 0.551042
TP0544 T. pallidum predicted coding region TP0544SubName: Full=Uncharacterized protein; chromosome CDS585651 1869 - 0.509363
TP0550 thiophene and furan oxidation protein (thdF)RecName: Full=tRNA modification GTPase MnmE; EC=3.6.-.-; chromosome CDS595566 1488 - 0.561828
TP0553 conserved hypothetical integral membrane proteinRecName: Full=UPF0118 membrane protein TP_0553; chromosome CDS598935 1212 + 0.476898
TP0554 phosphoglycolate phosphatase (gph-2)SubName: Full=Phosphoglycolate phosphatase; EC=3.1.3.18; SubName: Full=Phosphoglycolate phosphatase (Gph-2); chromosome CDS600181 669 + 0.54559
TP0557 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS603423 714 + 0.518207
TP0558 conserved hypothetical integral membrane proteinSubName: Full=Conserved hypothetical integral membrane protein; SubName: Full=Putative NiCoT family nickel (Ni2+)-cobalt (Co2+) transporter; chromosome CDS604166 909 + 0.564356
TP0561 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS608490 852 - 0.593897
TP0598 T. pallidum predicted coding region TP0598RecName: Full=Uncharacterized protein TP_0598; chromosome CDS649054 1818 - 0.510451
TP0622 T. pallidum predicted coding region TP0622SubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS675281 1782 - 0.553872
TP0648 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS709859 2049 - 0.506101
TP0649 hemolysin (tlyC)SubName: Full=Hemolysin (TlyC); SubName: Full=Putative hemolysin; chromosome CDS711852 798 - 0.473684
TP0650 conserved hypothetical proteinRecName: Full=Endoribonuclease YbeY; EC=3.1.-.-; chromosome CDS712637 483 - 0.496894
TP0651 conserved hypothetical integral membrane proteinSubName: Full=Conserved hypothetical integral membrane protein; chromosome CDS713125 2412 - 0.521973
TP0679 T. pallidum predicted coding region TP0679RecName: Full=Uncharacterized protein TP_0679; chromosome CDS743551 318 + 0.528302
TP0689 GTP-binding proteinRecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA; chromosome CDS755951 1383 - 0.438178
TP0731 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS796674 711 + 0.589311
TP0735 glutamate synthase (gltA)SubName: Full=Glutamate synthase (GltA); SubName: Full=Glutamate synthase (NADPH); EC=1.4.1.13; chromosome CDS799867 1557 - 0.55106
TP0742 GTP-binding protein (obg)RecName: Full=GTPase Obg; AltName: Full=GTP-binding protein Obg; chromosome CDS806765 1131 - 0.577365
TP0750 hypothetical proteinRecName: Full=Uncharacterized protein TP_0750; Flags: Precursor; chromosome CDS815113 672 + 0.522321
TP0776 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS843604 777 - 0.572716
TP0778 mazG protein (mazG)SubName: Full=MazG protein (MazG); SubName: Full=Putative nucleoside-triphosphate diphosphatase; EC=3.6.1.19; chromosome CDS844726 912 - 0.539474
TP0780 NH(3)-dependent NAD(+) synthetase (nadE)RecName: Full=Probable glutamine-dependent NAD(+) synthetase; EC=6.3.5.1; AltName: Full=NAD(+) synthase [glutamine-hydrolyzing]; chromosome CDS846325 2040 - 0.553922
TP0786 ABC transporter, ATP-binding protein, putativeSubName: Full=ABC superfamily ATP binding cassette transporter, ABC protein; SubName: Full=ABC transporter, ATP-binding protein, putative; chromosome CDS852093 714 + 0.522409
TP0790 antibiotic transport protein, putativeSubName: Full=Antibiotic transport protein, putative; SubName: Full=Putative RND superfamily resistance-nodulation-cell division antibiotic:proton (H+) antiporter; chromosome CDS855052 2667 - 0.502812
TP0798 methionyl-tRNA synthetase (metG)RecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; chromosome CDS864068 2436 - 0.538588
TP0803 T. pallidum predicted coding region TP0803SubName: Full=Uncharacterized protein; chromosome CDS871182 1209 + 0.493797
TP0815 T. pallidum predicted coding region TP0815SubName: Full=Putative GNAT family acetyltransferase; SubName: Full=Uncharacterized protein; chromosome CDS883732 984 + 0.521341
TP0819 conserved hypothetical proteinRecName: Full=Ribonuclease Z; Short=RNase Z; EC=3.1.26.11; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z; chromosome CDS887064 933 - 0.512326
TP0820 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS888024 771 - 0.557717
TP0832 T. pallidum predicted coding region TP0832SubName: Full=Uncharacterized protein; chromosome CDS899271 816 - 0.558824
TP0835 ankyrin, putativeSubName: Full=Ankyrin, putative; SubName: Full=Uncharacterized protein; chromosome CDS902269 2805 - 0.53369
TP0838 ABC transporter, ATP-binding proteinSubName: Full=ABC superfamily ATP binding cassette transporter, ABC protein; SubName: Full=ABC transporter, ATP-binding protein; chromosome CDS908013 1665 - 0.465465
TP0840 conserved hypothetical integral membrane proteinSubName: Full=Conserved hypothetical integral membrane protein; SubName: Full=Putative membrane protein; chromosome CDS910864 2250 + 0.497778
TP0855 T. pallidum predicted coding region TP0855RecName: Full=Uncharacterized protein TP_0855; Flags: Precursor; chromosome CDS929582 3384 - 0.562648
TP0875 conserved hypothetical proteinRecName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaE; chromosome CDS952536 408 + 0.568627
TP0880 membrane spanning protein, putativeSubName: Full=ABC superfamily ATP binding cassette transporter, membrane protein; SubName: Full=Membrane spanning protein, putative; chromosome CDS957204 726 - 0.421488
TP0883 conserved hypothetical integral membrane proteinSubName: Full=Conserved hypothetical integral membrane protein; SubName: Full=Putative membrane protein; chromosome CDS960272 1098 - 0.378871
TP0884 conserved hypothetical integral membrane proteinSubName: Full=Conserved hypothetical integral membrane protein; SubName: Full=Putative membrane protein; chromosome CDS961387 1089 - 0.450872
TP0902 carboxylesterase (est)SubName: Full=Carboxylesterase (Est); SubName: Full=Putative esterase/lipase; chromosome CDS983997 882 - 0.557823
TP0906 conserved hypothetical proteinRecName: Full=UPF0109 protein TP_0906; chromosome CDS987065 243 + 0.555556
TP0915 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS992507 1335 + 0.498127
TP0920 T. pallidum predicted coding region TP0920RecName: Full=TPR repeat-containing protein TP_0920; chromosome CDS996713 2430 + 0.545679
TP0921 NADH oxidaseSubName: Full=NADH dehydrogenase; EC=1.6.99.3; SubName: Full=NADH oxidase; chromosome CDS999250 1338 + 0.494021
TP0936 hemolysin, putativeSubName: Full=Hemolysin, putative; SubName: Full=Putative hemolysin; chromosome CDS1017604 1074 - 0.522346
TP0937 conserved hypothetical proteinSubName: Full=Putative phosphoesterase; SubName: Full=Uncharacterized protein; chromosome CDS1018849 636 - 0.536164
TP0944 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1025685 1173 - 0.531969
TP0948 spoIIIJ-associated protein (jag)SubName: Full=Jag family protein; SubName: Full=SpoIIIJ-associated protein (Jag); chromosome CDS1029193 696 - 0.514368
TP0954 conserved hypothetical proteinSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS1035136 1437 - 0.533751
TP0975 conserved hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase I; EC=2.1.1.198; AltName: Full=16S rRNA 2-O-ribose C1402 methyltransferase; AltName: Full=rRNA (cytidine-2-O-)-methyltransferase RsmI; chromosome CDS1058383 825 - 0.593939
TP0982 glpG protein, putativeSubName: Full=GlpG protein, putative; SubName: Full=Rhomboid family protein; chromosome CDS1065283 627 + 0.4689
TP0986 conserved hypothetical integral membrane proteinSubName: Full=Conserved hypothetical integral membrane protein; SubName: Full=DMT superfamily drug/metabolite transporter; chromosome CDS1070566 885 + 0.532203
TP0990 conserved hypothetical proteinSubName: Full=Putative outer membrane protein; SubName: Full=Uncharacterized protein; chromosome CDS1073524 3102 + 0.527724
TP1018 conserved hypothetical proteinRecName: Full=Ribonuclease Y; Short=RNase Y; EC=3.1.-.-; chromosome CDS1109926 1515 + 0.530033
TP1023 recX protein (recX)RecName: Full=Regulatory protein RecX; chromosome CDS1116458 495 - 0.545455
TP1033 conserved hypothetical proteinSubName: Full=Patatin family phospholipase; SubName: Full=Uncharacterized protein; chromosome CDS1126412 936 - 0.617521
TP1037 hemolysin III (hlyIII)RecName: Full=UPF0073 membrane protein TP_1037; chromosome CDS1133934 717 - 0.495119