SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: General function prediction only
Genomic element: chromosome 2

Number of genes found: 25

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	LBL_4131	Cysteine protease	chromosome 2	CDS	150513	2403	-	0.435289
NA	LBL_4092	Conserved hypothetical protein	chromosome 2	CDS	102194	1005	+	0.406965
NA	LBL_4093	FAD-dependent dehydrogenase	chromosome 2	CDS	103605	1557	+	0.451509
NA	LBL_4100	Tetratricopeptide repeat family lipoprotein	chromosome 2	CDS	113004	564	-	0.41844
NA	LBL_4113	Short chain dehydrogenase	chromosome 2	CDS	129320	756	+	0.424603
NA	LBL_4231	Short chain dehydrogenase	chromosome 2	CDS	268042	699	-	0.41774
NA	LBL_4223	Alpha/beta hydrolase	chromosome 2	CDS	257538	891	-	0.4422
NA	LBL_4022	Flavoprotein	chromosome 2	CDS	24254	603	+	0.437811
NA	LBL_4033	Short chain dehydrogenase	chromosome 2	CDS	35409	804	+	0.437811
NA	LBL_4187	Permease	chromosome 2	CDS	216647	1611	-	0.444444
NA	LBL_4261	Conserved hypothetical protein	chromosome 2	CDS	297754	414	-	0.403382
NA	LBL_4104	Transcriptional regulator, ArsR family	chromosome 2	CDS	116807	978	+	0.408998
NA	LBL_4059	Dinucleotide-binding enzyme	chromosome 2	CDS	63279	651	+	0.410138
NA	LBL_4064	Hypothetical protein	chromosome 2	CDS	69523	729	+	0.397805
NA	LBL_4032	Hypothetical protein	chromosome 2	CDS	34607	381	-	0.430446
NA	LBL_4006	HAD superfamily hydrolase	chromosome 2	CDS	7901	861	+	0.421603
NA	LBL_4042	MoxR-like ATPase	chromosome 2	CDS	45365	1008	+	0.452381
NA	LBL_4005	Conserved hypothetical protein	chromosome 2	CDS	6766	825	-	0.412121
NA	LBL_4117	Conserved hypothetical protein	chromosome 2	CDS	133765	1101	+	0.438692
NA	LBL_4179	Permease	chromosome 2	CDS	205733	1197	-	0.423559
NA	LBL_4098	Conserved hypothetical protein	chromosome 2	CDS	110655	747	-	0.429719
NA	LBL_4161	Pyrophosphatase	chromosome 2	CDS	184244	345	-	0.423188
NA	LBL_4084	Hypothetical protein	chromosome 2	CDS	93526	1455	-	0.389003
NA	LBL_4029	Short chain dehydrogenase	chromosome 2	CDS	31892	747	+	0.425703
batC	LBL_4047	BatC	chromosome 2	CDS	50046	699	+	0.430615