SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Signal transduction mechanisms
Genomic element: chromosome 2

Number of genes found: 16

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	LBJ_4109	Signal transduction protein	chromosome 2	CDS	125632	2127	+	0.38693
NA	LBJ_4028	Cyclic nucleotide-binding protein	chromosome 2	CDS	31048	369	+	0.430894
NA	LBJ_4054	Antagonist of anti-sigma factor	chromosome 2	CDS	57603	342	-	0.374269
NA	LBJ_4069	two component complex response regulator	chromosome 2	CDS	77013	1719	+	0.371146
NA	LBJ_4114	Hypothetical protein	chromosome 2	CDS	131347	1356	+	0.364307
NA	LBJ_4068	GGDEF family protein	chromosome 2	CDS	74873	1608	+	0.391169
NA	LBJ_4012	Sensor protein of a two component response regulator	chromosome 2	CDS	13786	906	+	0.4117
NA	LBJ_4106	Signal transduction protein	chromosome 2	CDS	122870	852	-	0.400235
NA	LBJ_4245	Response regulator	chromosome 2	CDS	278362	726	+	0.422865
NA	LBJ_4263	Response regulator	chromosome 2	CDS	298293	1371	-	0.378556
NA	LBJ_4095	Serine phosphatase RsbU, regulator of sigma subunit	chromosome 2	CDS	109141	1749	-	0.408805
NA	LBJ_4013	two component regulatory system response regulator	chromosome 2	CDS	14693	693	+	0.445887
NA	LBJ_4107	Chemotaxis protein	chromosome 2	CDS	123728	507	-	0.428008
NA	LBJ_4237	Sensor histidine kinase	chromosome 2	CDS	268778	2316	-	0.420121
dksA	LBJ_4139	DnaK suppressor protein	chromosome 2	CDS	161046	459	-	0.453159
wzb	LBJ_4030	Protein-tyrosine-phosphatase	chromosome 2	CDS	32614	552	+	0.396739