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# Borrelia afzelii, PKo

>BAPKO_0833 hypothetical protein
MRKDLIFLVLIVLIIVGVVIFFIRSSKKELVYFELNTKSNISFLFLVEDL
NKNLVSMQEIFINIKTGNLGFLDIPIHTGYEDLKGNISWFKDLYKKNSFN
KFLSKIYTQLSHESDYYIRFQKENFVRLIDYLGGVRLLVKNPVKVYSFED
SILIPSGTSNFDGDKSYNYLRYFNDVNHFEERGEFFKEFFKKLLFQISDF
GIENDIFFKIYSMLDTNLSEVVFKYIVKNYKINNDKIISINIKGQEEIFK
DNDNNLIKVVFPYYGGAILKESVDKLNKELINEGSEEVVKIVVLNGTKVV
GLAKKTANIFNSLKFKVLKFGNADKNSYKNTLIINNSDNLEMAVRVGEAI
KASNIKPISEVQTKRLLELDNLDINPDVIVVLGDDFDGRYVKSK
>BAPKO_0356 fibronectin/fibrinogen-binding protein, putative
MSLNYVEINTLIKEIPFTNSLIKKIIQPDYKSLILEIYNKIENKKLKILI
SLNPSTTRFHITKKKFKKNTLKLRFSEFLKSKIQNGKIIKAFQMKNERII
SLEILKKDIIILFIKLWPSSPNIIATNQNFKILDAYYRRPKIKETTGEIF
LKAKEIHESNKMSDKKIMGLKEEYNNASHTSYSEFLENYYESLSNQIKET
NIKELLIEKYKKELIVLEKRIESLKQQIKLIENIENEREKGELILLNINK
IQKGLKEIDLLNYKEEKIKISLNQSLSPKENALQYFKAYKKGKSSFNTIQ
NQLKDNLDKFNLIQSKITMLKVENFIPKEEYNQEETAIKKKEKTSKIGLH
FTSYGFEIIIGRNAKENDELLRHCVKGNDYWLHTRDYPGAYVFIKSQKNK
TPCLDVLLAAGNLCVFYTKLAKKSGKADLYYTQVKNLRRVKNGKLGLVIP
KAEKNLHIKLDENLIKKIKNQT
>BAPKO_0364 transcription factor, putative
MAFLLNQSVVYPMHGVGTIKDIRTKEFNGEIIDYYEIHFPFNDMIFMVPV
AKVDDFGIRALVSREKVEEVFDVIKKFEGQIDSKKIKDGGHEFYKKSDIL
DTAKLYKFLYKKSTQKELPFYEKRILNDFELILEHEISLALQISFEEAKK
KIKNILVDSKKA
>BAPKO_0553 conserved hypothetical protein
MNKPLLSELIIDIGNTSIAFASFKDNKINLFVKMKTNLMLRHDEVFSFFK
ENFDFNVNQVFISSVVPILNGIFENVIFSFFKIKPLFISFDLNYDLTFNP
YKSGKFLLGSDVFANLVAAIENYSFENVLVVDLGTACTIFAVSRQDGILG
GLINSGPLINFNSLLDNAYLLKKFSISTPSNLLERTTSGSVNSGLFYQYK
YLIEGVYRDIKKMYKKEFNLIIAGGNANLLLPLIEIEFIFNIHLTVEGIR
ILGNSIVF
>BAPKO_0775 hypothetical protein
MLIDIDQIKIKKRIRKNIGDIETLKNSIIKHGLIYPIIIDKNKNLIAGFR
RYQALKEIGYKEAEVKVISIENKKTLLEIELDENNVRKSFTKSEANEGEA
YLKIYSESNIIMRFFKFIILKIKNMWKRKNRKI
>BAPKO_0134 greA, transcription elongation factor
MSNVTIEKLDSILQEDKWTRIVVNNYSLAKIKELDDLIDNIIDEGLTEDV
LDICGRHLKDVKKSIAGLYISGMLIYSRRPLNDMNLLAVIDLFSQNLKWA
LVEHICNEMLSISENKHALYTLAKIYAQNNENDKLPNIWTRIVEADIDDT
VFVRQLATYYETIDLQKSIFYFRKAIYRFIDKKQMSGIREVWAKLIHYVS
DDFDSFLLILQKIEKDLGFKKAIVLYEDLFDHYSLTDNIDETIEILKGIL
KLDNKNHKARENLVKFLRERYKDVKNIEDYLVKSDIENLDKNFVDVYSDF
EKYLFFAKGNFVYHQTWSVGIVRDVNDHGITVDFVSKRGHFIGFDMAMSA
LSPLSREDIRVLKAITPKEELADRVKKDIEWAIKVIIKSYKAIDLKGIKK
ELVPSLMTQSSWNSWSLKAKQILKDNPHFVMDSGKLDCYVYNERSSNLNE
KMYDKFKIEKDFYKRYEIFINYCNVKGIVKDLHIEEEMLNYFLIYVNNFT
KVDHHVISSYVILKSLGNFSEELSSKVNIEKDVNLEFLLKEYSKGIVDLF
DSILNAEIKKELVVLIKRELSNWILYYKELFPHSVNKKLVESLYKEDPKE
VEKLFNYVIKNYKIYKDAYIWILKHFKTYSIELSYSDSDLLANLIKILTD
SVIKINNKNNSVASKRIYKMVINLLVKDGYLKSVLEYVRDEELAKRVYMT
CFYVKDFPPKDLLDIKSIIRQLFDSVEFEDEKMQLAGERMEIGFLTILSS
LNKKQKELKHLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLTK
RLNSLMLEIENAKVIDTKDLQSSVVGFGTKVIILNEVTGKDESYLILGPW
ESNPDEGIISYKSPFGENLLDSREGDSLNFIINNTNFKYFVKKIEPIKFS
>BAPKO_0663 mfd, transcription-repair coupling factor
MNIDEELTTILQNNSNLKKMKEYLEQNTFFSLTGYEGFFKAFLIKKIKEY
SKTGKIILIVKDEHTLDKIKNDLKVITNQIFEFNYFSPLVYKGIGSKSTI
FNERIKFLINFYKKNPGIYITVLKSLLSKIPNQNTLLKNIYKIEKNTKID
TVDIEKTLITLGYEKTLRVTIPGEFTIKGEIIDLYPFGEQNPIKIVLNFD
KIEEIRKFNPLTQLKQDNEILELQILPKKEIIWKNEVINNLKTKIKSVEY
KKILEELNLKKETKTEEMFYPLVANTYLSDEIEKHTPIVSFEINNFEKEI
EKIHQEYENLYKEAKEAGKNTIDPKRILLNSKDFNLKSDVLFSKIESSKS
KEVIEFKIESKRSFFSNIMLTKEEFKNWLKNGFKIIIAAESESQKEKLKY
IFKELPKVSIEVLKISSSLIIEEEKIAIILESNIFNTEQKINKSFESSKT
KAIASFIEIEKNSHVVHINHGIGIFRQIKRIKTSSLEKDYIEIEYAEGER
LFIPIEQTNLIQKYIGSDPKNIKLDKIGSKTWIKNKVNAKKRIEEIAEKL
IELYSKRESIKGIKYPKDNELQLLFESEFPYDETPDQITAIKEIKEDMMS
FKVMDRLLCGDVGFGKTEVAMRAAFKAVMGNKQVVVLSPTTILAEQHFNT
FKKRFKNFPIKIEVLSRFIKNNSEKRILKELKSGEIDIIIGTHKILSKKF
SCKNLGLIIIDEEQRFGVKEKEKLKEIRISVDCLALSATPIPRSLHMSLI
KLRDISVLKIPPKNRVKIEAYLESFSELLIKHAIENELSRDGQVFLVNHN
IEELHYLKTLIEKLTPYARIAIIHGKLTGIEIENIMHDFIKKAYQILLAT
TIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQD
SEKLNERSIERLRAITEFSDLGSGFKIAMKDMEIRGVGNLLGREQHGEIE
SIGLDYYLTMLNKAIEKKMGKISSEEEVDIEINYSGFIPDNYIKNEQTKI
LIYKKIFEIQTEEESKKIRSEIHDNFGPIPKEINSLLMLAELKILAKKLN
IIKIKETNKTLEIEYKNIESIPMEKIIEILQKHPNLLILNPSYQKSIFLS
FKNIEKSDKMNYIYKNINLLKTSS
>BAPKO_0472 ntrA, RNA polymerase sigma-54 factor
MIKQKLKLSQNLNSIQIQTIKLLSLNKKELTQLILEEIENNECLKIDSNK
IFFETLKTYRFKKVFYKEDNMIKNQHDIALEKTQTNISLKEHLLLQLRIQ
RINEDELKIGEILINNLNNKGFHIINPYDLFKKEEKEKVKKIIELIQKFD
PIGICVPNIIESLILQAKHHKLESNIIKILEKAELLEKTQEKLKEELKIR
SKEFNTALEIIRQKLNPNPTFEFKDPEDTNFYVDPDILIINHNNKFKIKI
KEVNIFKKELKRTNENPQKQKKAKWLIESLRYRDEILAKIGIAIYTLQKE
FLRRGFKSLRPMNLSILSEKINVSKSTISRAIKNKYLKCEWGTILIKELF
SSVGGAKTNEFSKLSIKITVKKLLEVNKKMSDKAISAILKSKGISISRRT
VNKYRNELKSEKGRIYYGT
>BAPKO_0853 nusA, N-utilization substance protein A
MIKGTGHMIVSIANDRSMSIESIRKTIKESVLIAYKKYFGSNENAFIKFD
DDTGDLIVYAKKKIVEEVKDSLLEILEKDISRENIVEGDYAYIEINPKVF
DRLSIQVAKQRTKNDLQGIEDNEILSEFKSKLNKVVIGYVQQNRNGDLYV
NLGNTDGIIPKKYQSPREVYSLNDKIRVLVYNVKKGKNGIEVILSRTHPK
FIEELLALEIPEIEEGIIKIHKIVRDPGYRIKVAVYSEKEEIDPVGPCIG
QKGVRIQSIIKELEGEKIDIIPYSKDIKEFIKDSLTPSKIEHVYILDEDL
HKALVVVSDDQLSLAIGKMGQNVRLANRLLDWAIDVKTSSQFAEMKANSE
FKQETLEMFDKVMQDVVEEEQFEEISKISDLKLLDSSVISNLSKEGLNDI
NNFLQADEGLLFNLGVSYEKQEEINKILKEGMIIIANDNGESMEKVEEDE
ELLCPECGVVINENMTSCPGCKIGLSFEFEEE
>BAPKO_0108 nusB, N-utilization substance protein B
MHEVRVLAFQKIYSIDINQSAMDDIFDIFNIEDKGLDIENESIKSFYSSL
VNGTFNNLEHIDSLIRDISWNWSLDRMDKVDLAILRMGVYSLKFQNFENS
KRAVIDDAILIAKKYGSKNSCKFINGILDALLKNMEN
>BAPKO_0409 nusG, transcription antitermination factor
MSRAWYVVQTYSQYEKKIEQDIRLLISEGVFGSVVLDVKAPIEKVEEIKN
GKKRIRERKIWPGYILIELDLPEVGWKDIVANIIKVQGVINFVGVSKGQR
PIPINDEEVKSVFMLTGEIKANKSIFMLYDFEEGERVRIKGGPFDSFEGL
ISSIDYERKKLKVAVQIFGRSTPVEVDFQHIEKI
>BAPKO_0612 recG, DNA recombinase
MFLHEFEYELKGIDGLGEKGVERLKNLQILNVKDLIEFFPVKYEDRQNIQ
TFPDFSKVKSCDMMTVFTVVGHKKFGDSSKKNLKLTAKSVNDEPFEILLF
NRAFLENVFKIDKKFYIYSKFTYNDYSGLWSCSNFDSEVFSDNPERFKKI
LPVYSLTEGLTSKKISLYVREALEYFFKFGQTDIPKFLIEKYSLLSLSEA
LKEIHFPSSLEMLEKAKKTLIYREIFLLQFFSRYRSSKVLFREKKHLSRD
LLERVISSLPFELTEGQRISIDEIFSDLNSSKPMNRLLQGDVGSGKTLVA
LLSGIPLIEAGYQVAFMAPTDLLARQHYDNLSNILSSFNISVTLLTGSLK
KRDKEQSLESIKSGASGLIVGTHAIFYESTEFKRLAYVIIDEQHKFGVVQ
REELKNKGEGVDMLLMSATPIPRSFALTLFGDLEISFIKTLPKGRLPITT
YLAKHGNEGKVYEFLRKELAKGHQVYFVYPLISSSEKFELKDVNNMCLKL
KEVFGEYVVDMLHSKLPSDLKEEIMKNFYSKKVDILVATSVIEVGIDCPN
ATCMVVEHAERFGLSTLHQIRGRVGRSNLQSFFFLLYKEPLTSAGKFRLK
TIKENLDGFKIAEEDLRLRGPGNLFGLEQAGYLKLKIANFVDDRDVIVLI
REELDLFFDDNSAYDNLDIDLLDNLFCSYLNAGRSI
>BAPKO_0239 rho, transcription termination factor Rho
MDKKNVGFDLENEIRRLDASKEFKIEDNLKKKVVKVVAKKDSTSNVTKSA
DLSGAKDSNGVVFSEFDYDIPASGLENSIKTLEQSNIIKFFNGKDYVEIE
KLYDKPITEVRKIVEGLGTNHTIAVTMKKTELIFLLVKILSENDINVLFT
GVLDVLSDGYGFLRTASNSYLSGGNDVYVSPSQIRLFNLRTGDILYGQIR
SPRDGERFFAMVKIKSINNQDPTFAQNRIPFDNLTPLYPNIKLNLEYENC
NISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVE
NKKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSAR
NIEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLF
PAINIKKSGTRKEELLLSEEERSKILLIRRILGGVDDYEGVEVLIEKMKK
SKNNEIFLKTMSNGN
>BAPKO_0748 rnc, ribonuclease III
MKKNSSDFCFSNERKAQLSEFLENLSIDFNNFDLLNTALSHSSYSNELDQ
KSDNNERLEFLGDSVLNLIITDHLYKTYPNKSEGELSKARSYIVSEDSLS
SIAREIDLGSYILLGRGEESNDGRNKKGILADAIEAFVGAIYLDSGFLIA
TEFVVGLFDMYIRLMFNRGDFKDYKSLLQEYVQKKYKISPNYKLDKEIGP
DHDKVFCVELYVGEKFISNGKGKSKKEAEMRAAEVALKAMEDINL
>BAPKO_0530 rpoA, DNA-directed RNA polymerase
MPMERFLKDFTIPEKIEFLKSQDDGSYGKFTIYPFERGFGVTIGNTLRRV
LLSSIEGYAITAMRVQSNNKDSSSKVVSSEFDLIPGVSEDTLEVIANIKN
IHLKLREGEQRKTISFSVSGKDTNVLKASHFERDGVEVFNKDLVIATLSH
DVNLDFEFQINYGRGYVSSEQNSKYLEEVNVIALDSIFSPIEKVSYSVED
TRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLFPLVDFEDSVS
VSFDKSKSESSNLLDMSIEKLDLSVRSLNCLAKENVRTLGELISKNAEEL
SKARNFGKKSLEEIIEKLGSYQLFLGMSKEDALSVLSKNVKISE
>BAPKO_0404 rpoB, DNA-directed RNA polymerase
MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKNKKPLLNEGLE
SVFRNIFPIKSGNGDVALEYERYYIENDTLNFTEKECKRKGQSYEAVLKV
RLNLQFLTTGEIRQKDVYMGTIPLMTERGTFIINGAERVIVSQIHRSPGV
VFYKEKDLYSARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILITLFLRA
LGFDTREKIIETFYNIKKIKVEEGTKRDLPGQYLAKSINIRENMYYRAGD
KITLQDVEDFLQNGVNEIELVDFDGYNDVSGKYFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYGALFPGEPISIDNAENDLKTIFFSERRYDL
GRVGRYKLSKKFGSDDLSTSVLTMDDIVNTISHLLRIYEGHDILDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPI
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVR
DVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLETPYRKVVNGE
VTNELEYLSAIDEEKKCIAQANAAFNSDGKYLEDLVSVRISGDYTTTNPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPP
IVGTGMESVVAKDSGVVVKAKRSGEVILATSNKIVVKPFESENVKDLDEY
HIVKYERTNQDTCFNQSVLVKEGQKVERGEIIADGPATRYGELALGNNLL
LGVIPWNGFNYEDAILISDRIVKEDLYTSIHIKEFSIEVRETKLGPEKVT
GDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKSEGDITPEFRL
LTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPL
GVPSRMNIGQLMESQLGLAGKYLSESYNVPVFESATNEQIQEKLKKAGFN
PTSKEILYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHARSTGPYSLVS
QQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIY
ENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDNGNQVPLTEKEEE
LINKS
>BAPKO_0403 rpoC, DNA-directed RNA polymerase
MKEIKDFEKIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCER
IFGTTKEWECYCGKFKSVRYKGIICDRCNVEVTHFKVRRERMGHIELAAP
VAHIWYYKYIPSRIGLLLDITASSLNSILYYEKYVVIEPGDTDLKKMQLL
NEDEYIEARERYGMSFNASMGAEAIKSLLENLDLDELSSKLRIQMIDKDD
KTDKKLLRRLEIIENFKISGNKPEWMIMEVLPVIPPEIRPMVQLDGGRFA
TSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHQCGLPAKMALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQI
LDLVIKEHPILLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPSAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLY
YLTMEKKNTVGEGKKFLNFNNVILAINNRSLDYNASIYVKIDGKYKKTTA
GRVIFNEALPNGIEFVNKTLSDLELQILISKVYVVHGSSTVIEMLDIIKE
LGFKYATKFGCTISMSDIIVPDEKKAYIDRANKEIAKIQNDYAKGVITGE
ERYNNVVSVWLKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQI
RQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTA
LKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVETVKNGEEILESLKE
KAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGIEKLVIRSVLT
CEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKISLKNTFILNGIEGFNVRVENGILFTRKGTLKIINVFY
EEKIKNIKEIKVSDSQRVIKGIPLFVNNKGVEILSSYIGYVKLRDDKFLI
VSEEQEVSLKAGTKLEIEVGEYVESGKVIGTFDPFAEPIIAEVKGKIKFK
DIILGTTLKEEINTETGNVEKRITDNVFESLDPRIFIIDSGGVEIASYVL
PGDAYLQVEDGQNINIGDIIAKLSKGSEKTQDITGGLPRVNDLFETRIPK
NLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD
IVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKH
IGVIIKQMMKKVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIA
SPILIGVTKTSLNIDSFISAASFQETTKVLTDASIAGKIDDLRGLKENVV
IGHLIPTGTGMGLYKKIKVSENVNSEV
>BAPKO_0756 rpoD, RNA polymerase sigma-70 factor
MSDLEKKYSKLIESIITHVGDRKSLSFSELSNLLPDDILEPEILDCICSV
LEDRGIRLVNKISELDLVGTEDGNDEEEEVEIASDRSFMVLDDGFQSDEE
DVDIDVKLDDCDEEGISIKDDLGSGYIKSNVLKDSHSEDPIKLYLKEIGK
EFLLTGNQEVELAKQMDSGESIIENILKNEGLVIENYYNLVNTIYSRMER
EEFFKREKDRDKESNPDYYNKKKRIASFYKIPLKPVQDRLISYVDNKHRV
YELGGDIFEKNLKKERLALKELLRDIPLYQDELRIFSDDYIDSANKIKDL
QRQQRIILSRLKIEKIRDLRVLGRDLTIAEKKIEIEKSLKLKEDAIKEQI
TEAQLAQKELERIEMYYEYPMDKIISMSEEIAKGKQMMQHAKDQLIKANL
RLVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWW
IRQAITRSISDQARTIRVPVHMIEQINRLNRETRYLVQVLGKDPTDEELS
DRLGWELKKVKTVKSVSREPVSLETPIGEEEDSVLSDFIEDKAIKNPANH
TSFVVLQDQIRAILGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTR
ERIRQIESKALRRLKNPKKTQKLKDYLEDLN
>BAPKO_0819 rpoS, RNA polymerase sigma factor
MNIFSNEDLNIYLKSVREHKLITHEEEIQLVGQIQRGSAKAKNKMINANL
RLVLKIIKRYAGKGLKIEDLIQEGNLGLIRAAEKYDPNKNTKFSTYASFW
IKQSLQRALNTKTRLVKVPYRKENLILQINKYLTEEEKAPKKEEIMKRFN
LSPAQYIKIIPYLEKEYSLDKEIEGSENSTLLNLYEDNSFNPEITLEQDS
TLQHLNYILETKLTEKERYIIKKRYNLDNSPKKSTLKDISTELGISSETV
RQIEKRVLKKLKEEIN
>BAPKO_0455 spo0J, stage 0 sporulation protein J
MDGVFKMIDIQLLDIDNDQPRKSVSLVELEELSISIKENGILQPIIVCKV
NERYKIIVGERRFRAAKLIQMTNIPVIEVNIKESCRDFMPLVENIQRENF
TPVEEAYAYKNVMNKYSLTQKDLSEKIGKSRTYISNIVRILDLEQEILNA
VHRKEISFGHAKVILSLKDKQDRYNLYLIILKKKFSVRDAEKYVKNFYKS
ITKKKEVEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIEYFTAGDLR
RIVSFFGHIN
>BAPKO_0200 spoT, guanosine-3,5-bis(diphosphate) 3- pyrophosphohydrolase
MIQAYEIAHLIKINDLEKAKSIFKKTIENTYKDEFERKNIFKALEIAEQL
HYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIEKE
EIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMFFAMTHDIRII
IIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLE
DLSFKHLYPKDYKEIKNFLSETKIEREKKLYKGKLSIEKELQKSGIEAEI
TVRSKHFYSIFRKMQTRTNKLTQIFDTLGIRIICKKQKECYEILEIVHRV
WKPIPGRLKDYIASPKENKYQSLHTTVRIPEDNQLIEIQIRTEEMDRIAN
YGVAAHWIYKEQIALKADDLSFINRIKKWQQESANKSQYSMNDIHKELLN
TFIYVYTPEGEVVELPFGSNSIDFAYIIHTDIGDQALYAKINGKISSITK
PLKNEQIVEIFTSKDSKPDVIWLNSVRTKKARSKIRSWLNKNDNTIFVDN
NIIAYLVGANKEQRKLFSLFKAYTKTKIKRITIDSECNPTTGEDIVGIIH
KDEIIVHNENCQKLKYYKKNQLIEVEWEATPTRKVHHIILLLKELKGIFS
YLENIFTINDVRLISEKIEDCGNGHGITNIIVSSNAKNIAKIISALKENP
NILQIMQVEEDIKNYDN
>BAPKO_0737 xylR-1, xylose operon regulatory protein
MQGENMVSIRGGNRRKILLGLKNMQYSRTDLARKLTLTNAAVTILTNQMI
KENLLIEVGSRVSDIKKHGRKEILLDINKDYAYSMGVIISSNYFQIGIAN
LKCEVLISETHSFEPPVSAYDILEKIKDHMIEIIWKHNFSRDKFIGLGFS
ITGLIKDKESGIVNDSYGAWIEKDVPVKRILEEYFSLTVYLESYVKNLSL
AEFMGKNVDNIMFFDYTDTAELSIWSGGNVYPGYNNKSGMVSHMIIDYEG
EKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYEKYEGRLKKVT
IYDVFSLYEKYDFVNKIMADTVKYLAIIIINIQRMLDFNYLVLYGQSFKL
KAFFDLLKEEIKKRNKENIVLKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID
>BAPKO_0884 xylR-2, xylose operon regulatory protein
MKHYLAIDIGGTNTKYSLADSSGVFFDKNEISTGTTSDELVNTLVNLINA
YKESSNIAGVAICIPGFVDLKGNVIRVNAISGFVNYPLKERLESLTGVST
EIENDANCVALAEKFKGNAIDSNDFIAITLGTGIGAGIFTNGKLLRGSSF
MSGEVGFMITRGISNNIPFNCRWEAISSVSALRKRVAMRLEKPLKEVSGE
CVFDLAENGNIHAKNEVDRFFENLSFGIFNLTFILNPEKILIGGGISARS
DLIDRIYEKLENLWSLEMAFVNNNNIKNLVTLEPTKFNNESGKIGALYHY
FTCKKQNNPSFD


# Borrelia burgdorferi ZS7, ZS7

>BbuZS7_0812 conserved hypothetical protein
MRKDLIFLFLIVLIIASVVIFFIRSSKKELVYFELNTKSNISFLFLIEDL
NKNLVSMQEIFINMKTGNIGFFDIPIHTGYEDLKGNISWFKDLYKKNSFN
KFLSKIYTQLSHESDYYIRFQKENFVRLIDYLGGVRLLVKNPVKVYSFED
SILIPSGTSNFDGDKAYDYLRYFNDVNQFEERVEFFKEFFKRLLFQISDF
GIENDSFFKIYSMLDTNLSEVVFKYIVKNYKINNDKIISINIKGQEEIFK
DNDNNLIKVVFPYYGGAILKESVDKLNKELVNEGAEEIVKIVVLNGTKVV
GLAKKTANIFNSLKFKVLKFGNADKNSYKNTLIINNSDNLEMAVRVGEVI
KTSNIKPISEVQAKRLLELDNLDINPDVIVILGDDFDGRYVKSK
>BbuZS7_A45 outer membrane protein
MIKFKLILIFFLFIVSTTYASVARPFDFRKWNFKKDIDLAYVLMHDLDNG
ILIKSQDKAGSIKSQEVLTKLNALNAYCNNLQRIIKAKLVRGRFQKEVEL
PLLKIIRKYKYLTRNYKNKSLIENPEYTKLIAERIIKKALFLENYFQSNR
LKNVKSGENIKKRISDNQSKLKSLRSKPNKSVGSKFSKNSRPYKSPQGVK
KCNKRRILDKYDLNGAESEFLDDPSQESDELEREYQDDELESEDPDDGER
EYQDDRESRDDTFNEDQSEDEFFDSLEDQFI
>BbuZS7_0351 putative fibronectin/fibrinogen-binding protein
MSLNYTEINTLIKEIPFTNSLITKIIQPDYKSLVLEIYNKIDNKKFKILI
CLNPNTTRFHITKKNFKKNALKLRFSDFLKSKIQNGKIIKAFQMKNERII
SLEILQKDMIILFIKLWPSSPNIIATNSNFKILDAYYRRPKIKETTGEIF
LKAKEIHESNKMSDKKIMELKEEYNNTSYTSYSEFLENYYESLNDQIKKT
NIKELLIEKYKKELIVLEKRIDSLKQQIKLLENIENEKEKGELILLNINK
IQKGIKEINLLNYKEEKIKISLNQSLSPKENALQYFKAYKKGKNSFKTIQ
NQLKDNLDKFNLIQSKITMLKVENLIPEEEYNQEKTAIKEKEKTPKIGLH
FTYCGFEILIGRNAKENDELLRHCVKGNDYWLHTRDYPGAYVFIKNQKNK
TPSLDVLLGAGNLCVFYTKLAKKSGKADLYYTQVKNLRRVKNKKLGLVIP
KAEKNLHIKLDENLIKKIKNQT
>BbuZS7_0756 conserved hypothetical protein
MLIDIDQIKIKKRIRKNIGDIETLKNSIIKHGLIYPIIIDKNKNLIAGLR
RYQALKEIGYKEIEVKVISIENKKTLLEIELDENNVRKSFTRSEANEGEA
YLKIYSESNIIIRFLKFIILKIKNMCKIRNRKI
>BbuZS7_0830 transcription elongation protein NusA
MIKGTGHMIVNIANDRGMSIDSIRKTIKESVLIAYKKYFGSNENAFIKFD
DDTGDLSVYAKKKIVKEVKDSLLEILEKDISKENIVEGDYAYIEINPKVF
DRLSIQVAKQRTKNDLQGIEDNEILSEFKSKLNKVVIGYVQQNRNGDLYV
NLGNTDGIIPKKYQSPREVYNLNDKIRVLVYNVKKGKNGIEVILSRTHPK
FIEELLALEIPEIEEGIIKIHKIVRDPGYRIKVAVYSEKEEIDPVGPCIG
QKGVRIQSIIKELEGEKIDIIPYSKDIKEFIKDSLTPSKIEHVYILDEDL
HKALVVVSDDQLSLAIGKMGQNVRLANRLLDWAIDVKTSSQFAEMKANSE
FKQETLEMFDKVMQDVVEEEQFEEISKISDLKLLDPSVISNLSKEGFDDI
NNFLQADEGVLFNLGVSYEKQEEINKILKEGMIIIANDNDESMEKVEEDE
ELLCPECGVVINENMTSCPGCKIGLSFEFEEE
>BbuZS7_0359 putative transcription factor
MAFLLNQSVVYPMHGVGTIKDIRTKEFNGEIIDYYEIHFPFNDMIFMVPV
AKVDDFGIRALVSREKVEEVFDVIKEFEGQIDSKKIKDGGHEFYKKSDIL
DTAKLYKFLYKKSTQKELPFYEKRILNDFELILEHEISLALQISFEEAKK
KIKNILVDNKKA
>BbuZS7_0734 RNA polymerase sigma factor RpoD (Sigma-70)
MSDLEKKYSKLIEGIITHLGDRKSLSFSELSNLLPDDILEPEILDCICSV
LEDRGIRLVNKISELDLVVSEDGNDEEEEVEIESDRNFMILDDGFQSDDE
DIDIDVKLDDCDEEDISVKDDLGSGYIKGNVLKDSHSEDPIKLYLKEIGK
EFLLTGNQEVELAKQMDSGESIIENILKNEGLVIENYYNLVNTIYSRMER
EEFFKREKDKDKESSPDYYNKKKRIASFYKIPLKPIQDRLISYVDNKHRV
YDLGGDIFEKNLKKERLALKELLRDIPLYQEELRIFSDDYIDSANKIKDL
QRQQRIILSRLKIEKIRDLRVLGRDLTIAEKKIEIEKSLKLKEDAIKEQI
TEAQLAQKELERIEMYYEYPTDKIISMSEEIAKGKQMMQHAKDQLIKANL
RLVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWW
IRQAITRSISDQARTIRVPVHMIEQINRLNRETRYLIQVLGKDPTDEELS
DRLGWELKKVKTVKSVSREPVSLETPIGEEEDSVLSDFIEDKAIKNPANH
TSFVVLQDQIRAILGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTR
ERIRQIESKALRRLKNPKKTQKLKDYLEDLN
>BbuZS7_0714 xylose operon regulatory protein
MQGENMVSIRGGNRRKILLSLKNMQYSRTDLARKLSLTNAAVTILTNQMI
KENLLIEVGSRVSDVKKHGRKEILLDINKDYAYSMGVIISSNYFQIGIAN
LKCEVLISETHSFEPPVSAYDILEKIKDHMIEIIWKHNFSRDKFIGLGFS
ITGLIKDKELGIVNDSYGSWIEKDVPVKRILEEYFSLTVYLESYVKNLSL
AEFMGKNIDNIMFFDYTDTAELSIWSGGNVYPGFNNKSGMVSHMIIDYEG
EKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYEKYEGRLKKVT
IYDIFSLYEKYDFINKIMQDTVKYLAIIIINIQRMLDFNYLVLYGQSFKL
KAFFDLLKEEIKKLNKENIVLKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID
>BbuZS7_0535 putative transcriptional activator, Baf family protein
MIIDIGNTSIAFALFKDNQVNLFIKMKTNLMLRYDEVYSFFEENFDFNVN
KVFISSVVPILNETFKNVIFSFFKIKPLFIGFDLNYDLTFNPYKSDKFLL
GSDVFANLVAAIENYSFENVLVVDLGTACTIFAVSRQDGILGGIINSGPL
INFNSLLDNAYLIKKFPISTPNNLLERTTSGSVNSGLFYQYKYLIEGVYR
DIKQMYKKKFNLIITGGNADLILSLIEIEFIFNIHLTVEGVRILGNSIDF
KFVN
>BbuZS7_0642 mfd, transcription-repair coupling factor
MNIDEELTTILKNNSNLKKMKEFLEQNIFFSLTGYEGFFKAFLIKKIKEY
SKTGKIILIVKDEHTLDKIKNDLQVITNQIFELNYFSPLVYKGIGSKSTI
FNERIKFLINFYKKNPGIYITVLKSLLSKIPDKNTLLKNIYKIEKNTNIN
TADIEKTLITLGYEKTLRVTIPGEFTVKGEIIDIYPFGEQNPIRIALNFD
KIEEIKKFNPLTQLKHDNEILEFQILPKKEIIWDDKTINTLKTKIKSVEY
KKILEELDFKKETKTEEMFYPLVANTYLGDEIEKHTPIVNFEINNFEKEI
EKIHQEYEKLYKEAEEAGKNIINPKRILLNYKTFNLKSDVLFSKIKSLKS
KETIEFKIESERNFFSNIALTKEEFENWLKNGFKIIIAAESESQKEKLKY
IFKELPKVSIEVLKISSSLIIEKEKIAIILESNIFNTGQKINKAFESSKT
KAIDSFVEIEKNSHVVHINHGIGIFRQIKRIKTSSLEKDYIEIEYAEGEK
LFIPIEQTNLIQKYIGSDPKNIKLDKISSKTWIKNKANAKKRIEEIADKL
IELYSKRESIKGIKYPEDNELQLLFESEFPYDETPDQIRAIKEIKEDMMS
FKVMDRLLCGDVGFGKTEVAMRAAFKAVMGNKQVIVLSPTTILAEQHFNT
FKKRFKNFPIKIEVLSRFIKNNAETRILKELKIGKIDIIIGTHKILSKKF
TCKNLGLIIIDEEQRFGVKEKEKLKEIRISVDCLALSATPIPRSLHMSLI
KLRDISVLKIPPQNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHN
IEELYYLKTLIERLTPYARIAIIHGKLTGEEIENIMHNFIKKAYQILLAT
TIIENGIDIPNVNTIIINNANKFGLAQLYQLKGRVGRGSQKAYAYFLYQD
SEKLNERSIERLRAITEFSELGAGFKIAMKDMEIRGVGNLLGREQHGEIE
SIGLDYYLTMLNKAIEKKMGKISSDEEEVDIEINYSGFIPENYAKNEQDK
ILIYKKIFKIQTEEESKKIRSELHNDFGPIPEEINSLLMLAELKILAKDL
NITKLKEKNRALEIEYKNIESIPMEKIIEILQKHPNLLLLNPSYQKSIFL
SFKNIEKSEKINYIYKNINLLKTST
>BbuZS7_0107 nusB, transcription antitermination factor NusB
MHEVRVLAFQKIYSIDINQSAMDDIFDIFNIEDKDLDIENESIKSFYSSL
VIGTFNNLEHIDSLIRDISLNWSLERMDKVDLAILRMGVYSLKFENFENS
KRAIIDEAILIAKKYGSKNSYKFINGILDALLKNMESCIEKK
>BbuZS7_0396 nusG, transcription termination/antitermination factor NusG
MSRAWYVVQTYSQYEKKIEQDIRLLINEGVFGGVVLDVKAPIEKVEEIRN
GKKRIRERKIWPGYILIELDLPEVGWKDIIANIIKVQGVINFVGVSKGQR
PIPINDEEVKSVFMLTGEIKANKSIFMLYDFEEGERVRIKGGPFDSFEGL
ISSIDYERKKLKVAVQIFGRSTPVEVDFQHIEKI
>BbuZS7_0235 rho, transcription termination factor Rho
MDKKNGGFDLESEIRRLDVSKEFKIEDNLKKKVVKVVAKKDSASSVTKSA
DLSGVKDSNGVIFPDFDYDIPSSGLENNIKTLEQSNIIKFFNGKDYVEIE
KLYDKPITEVRKIVEGLGTNHTIAVTMKKTELIFLLVKILSENNIDVLFT
GVLDVLSDGYGFLRTASNSYLSGGNDVYVSPSQIRLFNLRTGDILYGQIR
SPRDGERFFAMVKIKSINDQDPTFAQNRIPFDNLTPLYPNMKLNLEYENC
NISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVE
NKKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSAR
NIEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLF
PAINIKKSGTRKEELLLSEEERSKILLIRRILGGVDDYEGVEVLIEKMKK
SKNNEIFLKTMSNGN
>BbuZS7_0726 rnc, ribonuclease III
MKKKSSDFCLCNERKSQLSKFLENLSIDFSNFDLLNTALCHSSYSNELDQ
KSSNNERLEFLGDSVLNLIITDHLYKTYPNKSEGELSKARSYIVSEDSLS
NIAREINLGSYILLGRGEESNDGRNKKGILADAIEAFVGAIYLDSGFSRA
TEFVVGLFDMYIRLMFNRGDFKDYKSLLQEYVQKKYKISPSYKLDKEIGP
DHDKVFCVELYVGENFISNGKGKSKKEAEMRAAEVALKAMENINL
>BbuZS7_0513 rpoA, DNA-directed RNA polymerase, alpha subunit
MLVEKFLKDFTIPEKIEFLKSQGDGSYGKFTIYPFERGFGITIGNTLRRV
LLSSIEGYAITAMRVQSNNKDSSSKVVSSEFDLIPGVSEDTLEIIANIKN
IHLKLGEGEQKKTISFSVSGKDTNVLKASHFERDGVEVFNKDLVIATLSR
DVNLDLEFQINYGRGYVSSEQNSKYLEEVNVIALDSIFSPIEKVSYSVED
TRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLFPLVDFEDNVN
TSFEKSKSESSNLLDMSIEKLNLSVRSLNCLAKENVRTLGELISKNAEEL
SKARNFGKKSLEEIIEKLGSYRLYLGMSKEDALSVLSKNVKISE
>BbuZS7_0391 rpoB, DNA-directed RNA polymerase, beta subunit
MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKSKKPLLNEGLE
SVFRNIFPIKSGNGDVALEYERYYIENDALNFTEKECKRKGQSYEAVLKV
RLNLQFLTTGEIRQKDVYMGTIPLMTERGTFIINGAERVVVSQIHRSPGV
VFYKEKDLYSARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILITLFLRA
LGFDTREKIIETFYNIKKIKVEDGTKRDLPGQYLAKSINIRENMYYRAGD
KITLQDVEDFLQNGVNEIELVDFDGYDDISGKRFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYSSLFPGEPISIDNAENDLKTIFFSERRYDL
GRVGRYKLSKKFGFDDLTTSVLTMDDIVNTISHLLRIYEGHDILDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPI
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVR
DVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLETPYRKVVNGE
VTDQLEYLSAIDEEKKCIAQANAAFNSNGKYLEDLVSVRISGDYTTTSPT
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPP
IVGTGMESVVAKDSGVVVKAKRSGEVILATSSKIVVKPFEAENAKDLDEY
HIVKYERTNQDTCFNQSVLVKEGQKVERGEIIADGPATRYGELALGNNLL
LGVIPWNGFNYEDAILISDRIVKEDLYTSIHIKEFSIEVRETKLGPEKVT
GDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKSEGDITPEFRL
LTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPL
GVPSRMNIGQLMESQLGLAGKYLGESYNVPVFESATNEQIQEKLKTAGFN
PTSKEILYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHARSTGPYSLVS
QQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIY
ENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDAGNQVPLTEKEEE
LINKS
>BbuZS7_0390 rpoC, DNA-directed RNA polymerase, beta subunit
MKEIKDFERIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCER
IFGTTKEWECYCGKFKSVRYKGIICDRCNVEVTHFKVRRERMGHIELAAP
VAHIWYYKYIPSRIGLLLDITASSLNSILYYEKYVVIEPGDTDLKKMQLL
NEDEYIEARERYGMSFNASMGAEAIKTLLENLDLDELSSKLRIQMIDKDD
KTDKKLLRRLEIIENFKISGNKPEWMIMEVLPVIPPEIRPMVQLDGGRFA
TSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHQCGLPAKMALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQI
LDLVIKEHPILLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPAAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLY
YLTMEKKNVIGEGKKFLNFNNVILAINNRSLDYNASIYVKIDGEYKKTTA
GRVIFNEALPKGIEFVNKTLSDLELQILISKVYVVHGSSTVIEMLDIIKE
LGFRYATKFGCTISMSDIIVPDEKRTYVERANKEIAKIQNDYAKGVITGE
ERYNNVVSVWLKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQI
RQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTA
LKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVETVKNGEEILESLKE
KAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGIEKLVIRSVLT
CEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKISLKNAFILNGIEGFNVRVDNGILFTRKGTLKIINVFY
EEKIKNIKEIKVLDSQRVIKGIPLFIDKKGSEILSSYIGYVKLRDDNFFI
VSEEQEVSLKAGTKLEIEVGDYVESGKVIGTFDPFAEPIIAEVKGKIKFK
DIILGTTLKEEINTETGNVEKRITDNVFESLDPRIFIIDSSGMEVASYVL
PGDAYLQVEDGQSINIGDIIAKLSKGSEKTQDITGGLPRVNDLFETRIPK
NLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD
VVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKH
IGVIIKQMMKKVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIKQGGEPAIA
SPILIGVTKTSLNIDSFISAASFQETTKVLTDASIAGKIDDLRGLKENVV
IGHLIPTGTGMGLYKKIKVSENIDSEV
>BbuZS7_0457 rpoN, RNA polymerase sigma-54 factor
MIKQKLKISQNLNSIQIQTIKILGLNQKELTKLILEESENNECLEIDSNK
IFFETLKTYRFKKVFYKEDDMIKNQHDIALEKTQTNTSLKEHLLLQLRIQ
RINEDEIKIGEILINNLNSKGFHIINPYDLFKKEEKEKVKKTIELIQKFD
PIGICVPNIIESLILQAKHHKLETNIIKILEKAELLEKTQKKLKEELKIR
SKEFNTALEIIRQKLNPNPTLEFKDPNDTNFYVDPDILIINHNNKFKIKI
KEVNIFKKELKRTSENPQKQKKAKWLIESLRYRDEILAKIGIAIYTLQKE
FLRRGFKSLRPMNLSILSEKISVSKSTISRAIKNKYLKCEWGTILIKELF
SSVGGAKTNEFSKLSIKITVKKLLEANKKMSDKEISVILKSKGISISRRT
VNKYRNELKSEKGRTYYGT
>BbuZS7_0799 rpoS, RNA polymerase sigma factor (rpoS)
MNIFSNEDLNIYLKSVREHKLITHEEEIKLAGQIQRGNAKAKNKMINANL
RLVLKIIKRYAGKGLKIEDLIQEGNLGLIRAAEKYDPNKNTKFSTYASFW
IKQSLQRALNTKTRLVKVPYRKENLILQINKYLTEEEKSPKKEEIMKRFN
LSPAQYIKIIPYLEKEYSLDKEIEGSENSTLLNLYEDNSFNPEITLEQDS
TLKHLNYILETKLNEKERYIIKKRYNLDNSPKKSTLKDISTELGISSETV
RQIEKRVLKKLKEEIN
>BbuZS7_0850 rpoZ, DNA-directed RNA polymerase, omega subunit
MTKVPLKKIQDFDGNFYELVVATIMRTEQIIDNISLAEHAIFDDKILGQA
FNDVLTGKFRYSIEGR
>BbuZS7_0440 spo0J, stage 0 sporulation protein J
MDGVFKMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKA
NDRYKIIVGERRFRAAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENF
TPVEEAYAYKNIMNKYSLTQKDLSEKIGKSRTYISNLVRILDLEQEILNA
IHRKEISFGHAKVILSLKDRQDRYNLYLIILKKKFSVRDAEKYVKNFSKS
IVKKRELEQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIEIEYFTAGDLK
RIVSLFGHSS


# Borrelia burgdorferi, B31

>BB_0107 N-utilization substance protein B (nusB)
MDLMHEVRVLAFQKIYSIDINQSAMDDIFDIFNIEDKDLDIENESIKSFY
SSLVIGTFDNLEHIDSLIRDISLNWSLERMDKVDLAILRMGVYSLKFQNF
ENSKRAIIDEAILIAKKYGSKNSYKFINGILDALLKNMESGIEKK
>BB_0712 RNA polymerase sigma-70 factor (rpoD)
MSDLEKKYSKLIEGIITHLGDRKSLSFSELSNLLPDDILEPEILDCICSV
LEDRGIRLVNKISELDLVVSEDGNDEEEEVEIESDRNFMILDDGFQSDEE
DIDIDVKLDDCDEEDISVKDDLGSGYIKGNVLKDSHSEDPIKLYLKEIGK
EFLLTGNQEVELAKQMDSGESIIENILKNEGLVIENYYNLVNTIYSRMER
EEFFKREKDKDKESSPDYYNKKKRIASFYKIPLKPIQDRLISYVDNKHRV
YDLGGDIFEKNLKKERLALKELLRDIPLYQEELRIFSDDYIDSANKIKDL
QRQQRIILSRLKIEKIRDLRVLGRDLTIAEKKIEIEKSLKLKEDAIKEQI
TEAQLAQKELERIEMYYEYPTDKIISMSEEIAKGKQMMQHAKDQLIKANL
RLVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWW
IRQAITRSISDQARTIRVPVHMIEQINRLNRETRYLIQVLGKDPTDEELS
DRLGWELKKVKTVKSVSREPVSLETPIGEEEDSVLSDFIEDKAIKNPANH
TSFVVLQDQIRAILGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTR
ERIRQIESKALRRLKNPKKTQKLKDYLEDLN
>BB_0434 stage 0 sporulation protein J (spo0J)
MDGVFKMIDIHLLDIDNDQPRKSVSLVELEELSISIKENGILQPLIVCKA
NDRYKIIVGERRFRAAKLIQLTNIPVIEVDIKESCKDFMPLVENIQRENF
TPVEEAYAYKNIMNKYSLTQKDLSEKIGKSRTYISNLVRILDLEQEILNA
IHRKEISFGHAKVILSLKDRQDRYNLYLIILKKKFSVRDAEKYVKNFSKS
IVKKRELEQDPFLNNIKEFLFDKIQTKIDIKGNQNKGKIEIEYFTAGDLK
RIVSLFGHSS
>BB_0820 predicted coding region BB0820
MTKVPLKKIQDFDGNFYELVVATIMRTEQIIDNISLAEHAIFDDKILGQA
FNDVLTGKFRYSIEGR
>BB_0771 RNA polymerase sigma factor (rpoS)
MNIFSNEDLNIYLKSVREHKLITHEEEIKLAGQIQRGNAKAKNKMINANL
RLVLKIIKRYAGKGLKIEDLIQEGNLGLIRAAEKYDPNKNTKFSTYASFW
IKQSLQRALNTKTRLVKVPYRKENLILQINKYLTEEEKSPKKEEIMKRFN
LSPAQYIKIIPYLEKEYSLDKEIEGSENSTLLNLYEDNSFNPEITLEQDS
TLKHLNYILETKLNEKERYIIKKRYNLDNSPKKSTLKDISTELGISSETV
RQIEKRVLKKLKEEIN
>BB_A52 outer membrane protein
MIKFKLILIFFLFIVSTTYASVARPFDFRKWNFKKDIDLAYVLMHDLDNG
ILIKSQDKAGSIKSQEVLTKLNALNAYCNNLQRIIKAKLVRGRFQKEVEL
PLLKIIRKYKYLTRNYKNKSLIENPEYTKLIAERIIKKALFLENYFQSNR
LKNVKSGENIKKRISDNQSKLKSLRSKPNKSVGSKFSKNSRPSKSPQGVK
KCNKRRILDKYDLNGAESEFLDDPSQESDELEREYQDDELESEDPDDGER
EYQDDRESRDDTFNEDQSEDEFFDSLEDQFI
>BB_0230 transcription termination factor Rho (rho)
MDKKNGGFDLESEIRRLDVSKEFKIEDNLKKKVVKVVAKKDSASSVTKSA
DLSGVKDSNGVIFSDFDYDIPSSGLENNIKTLEQSNIIKFFNGKDYVEIE
KLYDKPITEVRKIVEGLGTNHTIAVTMKKTELIFLLVKILSENNIDVLFT
GVLDVLSDGYGFLRTASNSYLSGGNDVYVSPSQIRLFNLRTGDILYGQIR
SPRDGERFFAMVKIKSINDQDPTFAQNRIPFDNLTPLYPNVKLNLEYENC
NISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVE
NKKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSAR
NIEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLF
PAINIKKSGTRKEELLLSEEERSKILLIRRILGGVDDYEGVEVLIEKMKK
SKNNEIFLKTMSNGN
>BB_0355 transcription factor, putative
MAFLLNQSVVYPMHGVGTIKDIRTKEFNGEIIDYYEIHFPFNDMIFMVPV
AKVDDFGIRALVSREKVEEVFDVIKEFEGQIDSKKIKDGGHEFYKKSDIL
DTAKLYKFLYKKSTQKELPFYEKRILNDFELILEHEISLALQISFEEAKK
KIKNILVDNKKA
>BB_0705 ribonuclease III (rnc)
MMKKKSSDFCLCNERKSQLSKFLENLSIDFSNFDLLNTALCHSSYSNELD
QKSSNNERLEFLGDSVLNLIITDHLYKTYPNKSEGELSKARSYIVSEDSL
SNIAREINLGSYILLGRGEESNDGRNKKGILADAIEAFVGAIYLDSGFSR
ATEFVVGLFDMYIRLMFNRGDFKDYKSLLQEYVQKKYKISPSYKLDKEIG
PDHDKVFCVELYVGENFISNGKGKSKKEAEMRAAEVALKAMENINL
>BB_0389 DNA-directed RNA polymerase (rpoB)
MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKSKKPLLNEGLE
SVFRNIFPIKSGNGDVALEYERYYIENDALNFTEKECKRKGQSYEAVLKV
RLNLQFLTTGEIRQKDVYMGTIPLMTERGTFIINGAERVVVSQIHRSPGV
VFYKEKDLYSARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILITLFLRA
LGFDTREKIIETFYNIKKIKVEDGTKRDLPGQYLAKSINIRENMYYRAGD
KITLQDVEDFLQNGVNEIELVDFDGYNDISGKRFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYGSLFPGEPISIDNAENDLKTIFFSERRYDL
GRVGRYKLSKKFGFDDLTTSVLTMDDIVNTISHLLRIYEGHDILDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPI
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVR
DVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLETPYRKVVNGV
VTDQLEYLSAIDEEKKCIAQANAAFNSNGKYLEDLVSVRISGDYTTTSPT
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPP
IVGTGMESVVAKDSGVVVKAKRSGEVILATSSKIVVKPFEAENAKDLDEY
HIVKYERTNQDTCFNQSVLVKEGQKVERGEIIADGPATRYGELALGNNLL
LGVIPWNGFNYEDAILISDRIVKEDLYTSIHIKEFSIEVRETKLGPEKVT
GDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKSEGDITPEFRL
LTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPL
GVPSRMNIGQLMESQLGLAGKYLGESYNVPVFESATNEQIQEKLKTAGFN
PTSKEILYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHARSTGPYSLVS
QQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIY
ENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDAGNQVPLTEKEEE
LINKS
>BB_0800 N-utilization substance protein A (nusA)
MIKGTGHMIVNIANDRGMSIDSIRKTIKESVLIAYKKYFGSNENAFIKFD
DDTGDLSVYAKKKIVKEVKDSLLEILEKDISKENIVEGDYAYIEINPKVF
DRLSIQVAKQRTKNDLQGIEDNEILSEFKSKLNKVVIGYVQQNRNGDLYV
NLGNTDGIIPKKYQSPREVYNLNDKIRVLVYNVKKGKNGIEVILSRTHPK
FIEELLALEIPEIEEGIIKIHKIVRDPGYRIKVAVYSEKEEIDPVGPCIG
QKGVRIQSIIKELEGEKIDIIPYSKDIKEFIKDSLTPSKIEHVYILDEDL
HKALVVVSDDQLSLAIGKMGQNVRLANRLLDWAIDVKTSSQFAEMKANSE
FKQETLEMFDKVMQDVVEEEQFEEISKISDLKLLDPSVISNLSKEGFDDI
NNFLQADEGVLFNLGVSYEKQEEINKILKEGMIIIANDNDESMEKVEEDE
ELLCPECGVVINENMTSCPGCKIGLSFEFEEE
>BB_0731 conserved hypothetical protein
MLIDIDQIKIKKRIRKNIGDIETLKNSIIKHGLIYPIIIDKNKNLIAGLR
RYQALKEIGYKEIEVKVISIENKKTLLEIELDENNVRKSFTRSEANEGEA
YLKIYSESNIIIRFLKFIILKIKNMCKIRNRKI
>BB_0388 DNA-directed RNA polymerase (rpoC)
MKEIKDFERIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCER
IFGTTKEWECYCGKFKSVRYKGIICDRCNVEVTHFKVRRERMGHIELAAP
VAHIWYYKYIPSRIGLLLDITASSLNSILYYEKYVVIEPGDTDLKKMQLL
NEDEYIEARERYGMSFNASMGAEAIKTLLENLDLDELSSKLRIQMIDKDD
KTDKKLLRRLEIIENFKISGNKPEWMIMEVLPVIPPEIRPMVQLDGGRFA
TSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHQCGLPAKMALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQI
LDLVIKEHPILLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPAAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLY
YLTMEKKNVVGEGKKFLNFNNVILAINNRSLDYNASIYVKIHGEYKKTTA
GRVIFNEALPKGIEFVNKTLSDLELQILISKVYVVHGSSIVIEMLDIIKE
LGFRYATKFGCTISMSDIIVPDEKRTYVERANKEIAKIQNDYAKGVITGE
ERYNNVVSVWLKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQI
RQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTA
LKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVETVKNGEEILESLKE
KAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGIEKLVIRSVLT
CEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKISLKNAFILNGIEGFNVRVDNGILFTRKGTLKIINVFY
EEKIKNIKEIKVLDSQRVIKGIPLFIDKKGSEILSSYIGYVKLRDDNFFI
VSEEQEVSLKAGTKLEIEVGDYVESGKVIGTFDPFAEPIIAEVKGKIKFK
DIILGTTLKEEINTETGNVEKRITDNVFESLDPRIFIIDSSGMEVASYVL
PGDAYLQVEDGQSINIGDIIAKLSKGSEKTQDITGGLPRVNDLFETRIPK
NLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD
VVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKH
IGVIIKQMMKKVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIA
SPILIGVTKTSLNIDSFISAASFQETTKVLTDASIAGKIDDLRGLKENVV
IGHLIPTGTGMGLYKKIKVSENIDSEV
>BB_0783 predicted coding region BB0783
MRKDLIFLFLIVLIIASVVIFFIRSSKKELVYFELNTKSNISFLFLIEDL
NKNLVSMQEIFINMKTGNIGFFDIPIHTGYEDLKGNISWFKDLYKKNSFN
KFLSKIYTQLSHESDYYIRFQKENFVRLIDYLGGVRLLVKNPVKVYSFED
SILIPSGTSNFDGDKAYDYLRYFNDVNQFEERVEFFKEFFKRLLFQISDF
GIENDSFFKIYSMLDTNLSEVVFKYIVKNYKINNDKIISINIKGQEEIFK
DNDNNLIKVVFPYYGGAILKESVDKLNKELVNEGAEEIVKIVVLNGTKVV
GLAKKTANIFNSLKFKVLKFGNADKNSYKNTLIINNSDNLEMAVRVGEVI
KTSNIKPISEVQAKRLLELDNLDINPDVIVILGDDFDGRYVKSK
>BB_0347 fibronectin/fibrinogen-binding protein, putative
MIKMSLNYTEINTLIKEIPFTNSLITKIIQPDYKSLVLEIYNKIDNKKFK
ILICLNPNTTRFHITKKNFKKNALKLRFSDFLKSKIQNGKIIKAFQMKNE
RIISLEILQKDMIILFIKLWPSSPNIIATNSNFKILDAYYRRPKIKETTG
EIFLKAKEIHESNKMSDKKIMELKEEYNNTSYTSYSEFLENYYESLNDQI
KKTNIKELLIEKYKKELIVLEKRIDSLKQQIKLLENIENEKEKGELILLN
INKIQKGIKEINLLNYKEEKIKISLNQSLSPKENALQYFKAYKKGKNSFK
TIQNQLKDNLDKFNLIQSKITMLKVENLIPEEEYNQEKTAIKEKEKTPKI
GLHFTYCGFEILIGRNAKENDKLLRHCVKGNDYWLHTRDYPGAYVFIKNQ
KNKTPSLDVLLGAGNLCVFYTKLAKKSGKADLYYTQVKNLRRVKNKKLGL
VIPKAEKNLHIKLDENLIKKIKNQT
>BB_0831 xylose operon regulatory protein (xylR-2)
MRINMKHYLAIDIGGTSTKYSLSDSSGVFFDKNEISTGATSDEQVNILVN
IINSYKESSDIAGVAICIPGFVDLKGNVLRVNAISGFVNYPLKERLESLT
GVSTEIENDANCVALAEKFKGNAIDSNNFIAITLGTGIGAGIFANGKLLR
GNSFMSGEVGFMITGGISNNIPFNCKWESIASVSALRKRVAMRLGKPLKE
VSGEFVFDLAENGNIHAKNEVDRFFENLSFGIFNLTFILNPEKILIGGGI
SARPDLIDRIYEKLENLWSLEMAFDNNNNIKNLVALEPTKFNNESGKIGA
LFHYFTCKNQNNTSF
>BB_0527 conserved hypothetical protein
MNKPLLSELIIDIGNTSIAFALFKDNQVNLFIKMKTNLMLRYDEVYSFFE
ENFDFNVNKVFISSVVPILNETFKNVIFSFFKIKPLFIGFDLNYDLTFNP
YKSDKFLLGSDVFANLVAAIENYSFENVLVVDLGTACTIFAVSRQDGILG
GIINSGPLINFNSLLDNAYLIKKFPISTPNNLLERTTSGSVNSGLFYQYK
YLIEGVYRDIKQMYKKKFNLIITGGNADLILSLIEIEFIFNIHLTVEGVR
ILGNSIDFKFVN
>BB_0502 DNA-directed RNA polymerase (rpoA)
MMLVEKFLKDFTIPEKIEFLKSQGDGSYGKFTIYPFERGFGITIGNTLRR
VLLSSIEGYAITAMRVQSNNKDSSSKVVSSEFDLIPGVSEDTLEIIANIK
NIHLKLGEGEQRKTISFSVSGKDTNVLKASHFERDGVEVFNKDLVIATLS
HDVNLDLEFQINYGRGYVSSEQNSKYLEEVNVIALDSIFSPIEKVSYSVE
DTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLFPLVDFEDNV
NTSFEKSKSESSNLLDMSIEKLNLSVRSLNCLAKENVRTLGELISKNAEE
LSKARNFGKKSLEEIIEKLGSYRLYLGMSKEDALSVLSKNVKISE
>BB_0450 RNA polymerase sigma-54 factor (ntrA)
MIKQKLKISQNLNSIQIQTIKILSLNQKELTKLILEESENNECLEINSNK
IFFETLKTYRFKKVFYKEDDMIKNQHDIALEKTQTNTSLKEHLLLQLRIQ
RINEDEIKIGEILINNLNSKGFHIINPYDLFKKEEKEKVKKIIELIQKFD
PIGICVPNIIESLILQAKHHKLETNIIKILEKAELLEKTQKKLKEELKIR
SKEFNTALEIIRQKLNPNPTLEFKDPNDTNFYVDPDILIINHNNKFKIKI
KEVNIFKKELKRTSENPQKQKKAKWLIESLRYRDEILAKIGIAIYTLQKE
FLRRGFKSLRPMNLSILSEKISVSKSTISRAIKNKYLKCEWGTILIKELF
SSVGGAKTNEFSKLSIKITVKKLLEANKKMSDKEISVILKSKGISISRRT
VNKYRNELKSEKGRTYYGT
>BB_0693 xylose operon regulatory protein (xylR-1)
MQGENMVSIRGGNRRKILLSLKNMQYSRTDLARKLSLTNAAVTILTNQMI
KENLLIEVGSRVSDVKKHGRKEILLDINKDYAYSMGVIISSNYFQIGIAN
LKCEVLISETHSFEPPVSAYDILEKIKDHMIEIIWKHNFSRDKFIGLGFS
ITGLIKDKELGIVNDSYGSWIEKDVPVKRILEEYFSLTVYLESYVKNLSL
AEFMGKNIDNIMFFDYTDTAELSIWSGGNVYPGFNNKSGMVSHMIIDYEG
EKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYEKYEGRLKKVT
IYDIFSLYEKYDFINKIMQDTVKYLAIIIINIQRMLDFNYLVLYGQSFKL
KAFFDLLKEEIKKLNKENIVLKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID
>BB_0394 transcription antitermination factor (nusG)
MSRAWYVVQTYSQYEKKIEQDIRLLINEGVFGGVVLDVKAPIEKVEEIRN
GKKRIRERKIWPGYILIELDLPEVGWKDIIANIIKVQGVINFVGVSKGQR
PIPINDEEVKSVFMLTGEIKANKSIFMLYDFEEGERVRIKGGPFDSFEGL
ISSIDYERKKLKVAVQIFGRSTPVEVDFQHIEKI


# Borrelia duttonii Ly, Ly

>BDU_788 uncharacterized conserved protein
MRRELFFLVLIILIILGIVIFFVDISKREQIYFELNTKSNISFLFLVEDD
NENLLSMQEVFINIKTGNVGFLDIPIYTGYEDFKGNISWFEALYKKNNFT
EFLVKVSKQLNHEPDYYIRFKKDNFVRFVDYLGGVRFLVRNPVKVYNLVH
SILIPSGNSIFDGDKVYDYLSYFRDIASYDERFEFYKEFFKKILAQFANF
QEEYDYFSKMYVMLDTNLSETVFKYILSNYKINDEKLIFFNIKGQEETFK
DDDDNLIKVIFPYYGGAVLKESIENLNRILIDGTKTEDVIKIIILNGTQT
AGLARNVADIFKSLKFKVIRFGNADKHNYSNTLIINNSDNLEIAIKAGDV
IRARNIKPISEFHMDILGLDISDMGPDVVIILGDDFDGRYVKSR
>BDU_526 pantothenate kinase
MMSKIVDSTQLIVDIGNTSISFALYDVGGMQIFCKLKTKLDLSFRELCNF
LKLKFNFKVSKVFVSSVVPVIDKVLIDAIIFLYNVTPLFIGYDLSYDLSF
EFYNGRKFILGSDVFANLIGAIEYYNINDALIADLGTACTIFAVSRKDGI
LGGLINGGPFTSLTALIENAYLLKDFNLVVPQNLLGLSTIDSVNSGVIYQ
YKYLIEGVYHDLIRNYDREFKLIITGGNSNLILPLISVDFIFNLYLTLEG
IRILGNAFKENHLS
>BDU_734 uncharacterized conserved protein
MLIDLEQIKIKKRIRKNIGDTTTLKESIKKHGLIYPIIIDKNKNLVAGFR
RYQVLKELGYKEVDVKVIPIEDKKRLLEIELDENNVRKSFTKSEAEEGEE
ELKNYSEKNKIIRFIKKIIIKIKKIIIKIKKQN
>BDU_353 transcription factor, putative
MSFVLDQAVVYPMQGVGKIKNIQNKEFNGEFIDYYEIYFPFNEMTFMVPV
ARAADLGIRALVSKEKVEEVFDIIKDFEGQIDQKKIKDGSHDFYKQSDIL
STAKLYKFLYVKSMQKELPFYEKRILNDFELILQHEISLALQISFEEAKE
KIREVLSGGQS
>BDU_346 fibronectin/fibrinogen-binding protein, putative
MSLNYHEINILLEELPLINSFLKKIKQPNYKNLVIEFYNKSTDEKNFNVL
ISLDSQKTRIHKTNKKFENIKPPLRFFEFLKSKVTNGKVCEAHQIKNERI
ILIKINKNQNYYCIFIKLWASSPNIIVTDTNFKILDAYYRRPKSKEITGE
IFTKAKKIIENNDITEKKEVKLKNEYDNKLPYSTFIENYYDNLKIKETKT
HNTEMFNKTYEQEKINLERKIYSLNKQLISMDIIETHKEKGEMILSNINK
IKKGMSEITLQNNNGEEIKITLEKKLSPQDNALKYFKTYKKNKNFLKIVQ
EQLKNAKTQYNTLISNTTYTKEKNHTTLTDEKTTKQKIIKKTSIGLHFIS
HGFEIIVGRNAKENDELLRSWAKGNDYWLHTRDYPGAYVFIRNKKNKTPP
LEVLIDAGNLCVFYTKPAKQAGKADLYYTNVKYLRKIKGEKKGLVIPHRE
KNLDIKLDLKILNKLKNKN
>BDU_523 Response regulator receiver (CheY) modulated Serine phosphatase
MRMNSNNVINVLNEFGLKIEEIFLLINTYSYALYKETPRYFYDDITNYLE
LTLDIANKFQGEFADSKDLKLGKFMLRSMKCDLMSYLYLSLELIDNSMHY
SGIGDAGIAFFKAISCKILSVISYIEIEFENMVFSSALKNRKDANKGGNQ
LLIFSCESAYSTKLVNYLILKDYIVISANTVDLFSQLLCDNFYDLIILDL
NSDENIQMILDLLRNIKSNSLYEMVPVIVISQITRKDIIQTFIEEQVDDY
FFKSLDLLVLDIRITSFLKKKKVIEQGQKYLDLVLHGRECVESELIEAGN
YIENLLPKKIRNEFFHSNWIFVPSKRIGGDFFNYYFVNDDNLIIYLIDIS
GHGVGSALLSLNVSSVINSYVMNNNDISPYKVLNYVNTYFVKFRSDMFIT
LWYGVLNVKTKHLRFASAGAPPAVVLSEKGNVYLKTKGAILGIEEMYPCK
ESECYLNKFSHLLLFSDGVYEIENNQDIIMSIDDFYKILKKNTLNLDSFV
LERLYNKMLNLSKYNVFRDDFSILEFIIY
>BDU_136 greA, transcription elongation factor EF
MSNITIERLDNILQEDKWTRIVVNNYSLAKIKELDELIDNIISENLTEEA
LDICGKHLKDIKKSIAGLYISGMLIYSRRPLNDMSLLTVVDLFSQNLKWS
LVEHICHKMLLTSENKHALYTLAKIYAQNNENDKLPSIWMRIVEADVDDT
VFVRQLATHYENVDLQKSIYFFRKAIYRFIDKKQMSGIREIWSKLIRYVS
DDFDSFLLILQKVEKELGFKKVVVLYEDLYEHYSVSGNIDETIEILKGIL
KLDNKNQKARENLVIFLREKYKDVNNIEEYLEKSDIENLDKNFVDVYSDF
EKYLFFAKGNFVYHQTWFVGIVKDVNDQGILVDFVSKRGHFISFDMAISA
LSPLEREDIRVLKAIKPKEELVEHLKRDIEWALKVIIKSYKSIDLKGIKR
ELVPSLMTQSAWNLWSVKAKQILKDNPHFVMASGKADCYIYNERASNFNE
KIYDKFKVEKDFYKRYEIFMHYYTSGGIVKDSHIEEEMLNYFLIYVNNFA
KVDHYVISSYVILKSLKDFDDKIALKINIERDINLEVLLKEYSKSIVDLF
DAILNADIKKELISLIKEELVDWVAYYKQLFPCYVNKKLIDSLYKEDIKE
TEHLFNYVTKNYKMYKDAYIWILKHYTSYSLNLDYSDADLLVNLIKILTD
SVIKINNKNNSVANKRIYKMVSNLLIKDKYLSIVLSNVMDEELAKRIYMT
CFYIRDFPPKDLIHIKTAIRTVFGNIEFEDEKMQVSGDKVEIGFLTILSS
LSKKQKELQYLKDVEIPENSKEIGKARELGDLKENAEYHSAKERQQFLTK
RLNTLMSEIDVAKVIDIKELQSSVVGFGTKVTMINKDTEREESYLIFGPW
ESNPDEGIISYKSPFGENLLDSREGDSLDFVINDTHFQYYVKKIEPAKIN
>BDU_627 mfd, transcription-repair coupling factor
MNIEKELTTKLKNNQNLQKMQKFIEQNIHFTLTGYEKFFKAFLIHKIKKY
SNNKVILIVKNENISDKIKNDLTQITDQIYELNYFSPLIYKGIGSKSKVF
CDRVKFLINFYENNPGIYIVSLKSLLSKIPTKKDLFNNIYKIQTDKIINI
ENFEKKLIKMGYEKTMRVTLPGEFTINNKIIDIHSFNHKEPTRISLNNDK
IKQINYFNPLNQLKQKNAIYEFNIIPKKEIIWNKENIDKLKNYIKESEYK
QFFKQIETKYNARTEEVFYPFLGETLLSQEINENTITINFEIPNLKEEIK
QIYKEYDRLYTQAIESDIKIVSPKEIFINPNDLKLKSNIYFIKTPINQQT
EKPTKEIIEFKIESERRFFSNIVLAKQEIQNWIDNGFQVIITAESNSQKE
KLKYIFQDIPKIKVEVIKISSSLIINEEKIAIITEADIFNKKQKTNKTFE
SSKTKPIDSFIEIEKNSHIVHINHGIGIFRQIKRIKTSLIEKDYIEIEYA
DNEKLFIPIEQTHLIQKYIGNETQNIKLDRISSKTWEKKKVYATKKIDKI
ADQLVSLYAERENITGFQYPQDDEWQLLFESEFPYDETPDQLTAISEIKQ
DMMSSKVMDRLLCGDVGFGKTEVAMRAAFKAVMGKKQVAILSPTTILTEQ
HFNTFKKRFKNFPIQIAMISRFITKSKEKEILRNLETGNIDIIIGTHKIL
SKKITYKDLGLIIIDEEQRFGVKEKEKLKEIKVSVDSLALSATPIPRSLH
MSLIKLRDISVLKTPPQNRIKIETYVEEFSEILIKHAIENELSRDGQVFF
VHHNIQELDSIKAMIEKVVPYARIATIHAKLTGEQIENIMQDFINKSYQV
LLATTIIENGIDIENANTIIINNANRFGLAQLYQLRGRVGRSSKKAFAYF
LYKENSNLNEGAIERLRAISEFSELGAGFQIAMKDMEIRGVGNLLGREQH
GEIESIGLDYYLTMLNKAIEKRMGKNSKKNEINIEINYNGFIPNSYINNE
QHKISIYKKISAIQSEEENNKIRSEIYDRFGPIPNELNSLLILSELKLLA
QKLNITSLKERNGLLEIEYLDINSIPAEKIMKIIKDNPNILKLNQEYQNS
VFLNLGNIKETDKINWIYKNLYLLL
>BDU_449 ntrA, RNA polymerase sigma-54 factor
MLKQNLKLTHKLQLTQINTIKMLSLDKQELIQIISDELDNNEYIKVDSNK
IFFESLKTYKFKKFFYKENENNKTQYEIALAKTSPKISLKEHLLLQLRIQ
RLNEEEINIGEIIINNLNRKGLYIINPYDFFNKEEWPQVTKMIKLIQQFD
PIGICVPNIIESLILQAKYHNLDTNIIKILQKADLLTNTKEKLQKELNIS
TQDLNDAINTMKLKLNPNPTFEFKDKDDTNDYIEPDIIVINKGNKLKIKI
KEVSIFKTEINKQEVKDLCKYKQAKWLIEALRYRDETLAKIGIAIYTLQK
EFLKRGFKRLRPMNLDDISTRINLSKSTISRAIKNKYLKFDWGTIAIRKL
FNSIGGAKTNEFSKLSIKIIIKGILAQNKNMVDSQISDILKSKGITISRR
TVNKYRNELKCEGEIYGT
>BDU_808 nusA, N-utilization substance protein A
MLRRLNCLKGVLDMIKGTGQMIANIASERGMSIDAIRKTVRESVIIAYKK
YFGTSDNALIKFDDNTGDLIVYSKKRIVDEVKNNVMEILVDDAKTFEVVD
NEYVYVEINPKIFDRLSIQVAKQRTKSDLQGIEDNELYLEFKHKLHKIVI
GYVQQNRNGDLYVNLGSTDGVIPKKYQSPREVYSLNDKVRVLVYSVKKGR
NGIEVILSRTHPKFIEELLALEIPEIEEGIIKIHKIVRDPGYRTKVAVYS
EKEEVDSVGPCIGQKGVRIQSIIKELEGEKIDIIPYSKDIKEFIKDSLTP
AKIDNVYIIDEDLHKALVVVSDDQLSLAIGKMGQNVRLANRLLDWAIDVK
TNSQFAEMKASGEFKQDTFEMFDKIIQDNVQEDEFEEINKISELKVLDDD
IVAKLIQRDLDDIDNFLNASEDKLFELGITYEKQEEINKILKEGMVIISN
DDESVEDVKDEEDLLCPECGAVINENMTFCPGCKIGLSFEFEEE
>BDU_110 nusB, N-utilization substance protein B
MVMDLRHKARVLAFQKIYSIDVNCKAKDNIFDIFSFEENGIDLDGDLKLF
YSVLVNGTYDNLESIDKLISGISLNWRLDRMDKVDLAILRMSVYSLKFQD
LDVPKRVIIDEAILIAKKYGNKNSDKFVNGILDALLKDMESSFENK
>BDU_388 nusG, transcription antitermination factor
MSRAWYVLQTFSQYEKKIEQEIKLLISEGVFGNNVLDVKAPIERVEEIRN
GKKRIRERKIWPGYILIELDLSDQEWKSTVANIIKISGVVNFVGTTKEQK
PLPISDEEVKSVFMLAGEIKADKSIFILYDFEEGERVRIKGGPFDSFEGV
IGSIDYEKKKLKVAVQIFGRSTPVEVDFQHIEKI
>BDU_584 recG, DNA recombinase
MFLHEFQYGLQGINGLGSRGIDRLNNIRITNVKELIEYYPKKYEDRKNMA
AFPDPLQVRICELMTIFTVIEHRDFGNTFKRNLKIIGRSENSELFEILLF
NRSFLERIFKIGQKFYIYARFSYNDYTKMWSCSNFDSEIFSYNPVKFKKI
MPVYSLSEGLSSKKISSYVKGALAYFVKFGQSDIPKFLINKYSLLSLHEA
LNEIHFPSSLEMLRRAKKTLVYREIFLLQFFSRGKSYRVFLRAEKNLSND
LLKQIISKLSFELTRDQKIAITEIINDLKNNKPMNRLLQGDVGSGKTLVA
FLSSIPLIEAGYQVAFMVPTDLLARQHYNSLTNILKDFDISVVLLTGSLK
KKDRDEVLEKIQSGICSLVIGTHAIFSQGTKFKNLAYVIIDEQHKFGVEQ
REELRNKGEEVDVLLMSATPIPRSLALTLFGDLEVSLIKRGPEGRLPVTT
YLAKHGNEEKVYEFLKNELGKGHQVYFVYPLISSSEKFNLKDATSMCLNL
QNIFVEYSVAMIHSKLESYVKEEIMHNFYLKKIDILVATSVIEVGIDCPN
ATCMVVEHAERFGLSTLHQIRGRVGRSNLKSFFFLLYKEPLTEAGKFRLK
TIKENTDGFKIAEEDLKLRGPGNLFGLEQSGYFNLRISDFVEHKEIIGLM
RAELDIFCSNRDFYDKSDVKLLDSLLVSYLSSVSKGS
>BDU_230 rho, transcription termination factor
MDRKCEEFDLEDEMKRLNSSKELKIEDNNKKKVVKVVTKKESVSSASRNS
NIDKLRESNELSSDFDYDISDPDLESSIKTLEQSNIINFLGGKDSIVIDT
LYDKPITEIRKVVEGLGTNHTIAVTMKKTELIFLLVKILTEHNINVLFTG
VLDVLSDGYGFLRTASNSYLSGGNDVYVSPSQIRLFNLRTGDILYGQIRS
PREGERFFAMIKIKSINDQDPTFAQNRIPFDNLTPLYPSSKLDLEYENCN
ISTRLINLFAPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYPDIVLMI
LLIDERPEEVTDMIRGVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVEN
KKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARN
IEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLFP
AINIKKSGTRKEELLLSEEERSKILLIRKILSGVDDYEGVEALVEKMKKS
KNNEIFLKTMSNGD
>BDU_707 rnc, ribonuclease III
MGSSVVKLDVDRKQKLNEFLMGLHIDFNDIYLLNMSLSHSSYANEFDQKY
ANNERLEFLGDSVLNLIITDYLYKFYPDKSEGELSKARSYIVSEDSLSSI
ARELNLGNYILLGRGEENNDGRNKKGILADAIEAFVGALYLDGGFSKAST
FVVELFEVHIRLMFNRGDFKDYKSLLQEYVQKKYKISPSYKLAKELGPDH
NKIFCVELYVNDKFVSNGKGKSKKEAEMIAAEMALKNIVNIDL
>BDU_505 rpoA, DNA-directed RNA polymerase
MSLGKLLKDFTIPDRIEFVRGEDDGSYGKFIIYPFEKGFGVTIGNTLRRV
LLSSIEGYAISAMRIQSNQEESLKIVSSEFDLIPGVMEDTLEVIANIKNV
HLKLDEGVTNTTINLSVNGKDNNVLKAGHLEREGVEVFNKDLVIATLSSD
ANLDFEFQVNYGRGYVSSEQNAKYLEEVNTIALDSIFSPIEKVTYSVEDT
RVGQRSDYDKLVMEIWTTGVISAKDAIKKAASVVREFLLPLVNFEDKVIH
SVDYAEFRDSDILSMNVEKLNLSVRSLNCLIKENVKTLGELISKSPVELS
KARNFGKKSLEEIVEKLNAYGLFLGMSKVEALKVLSKHDKISH
>BDU_383 rpoB, DNA-directed RNA polymerase beta chain
MIKRVHLGQGKAEEILNLPNLIEIQLNSYEKFLQLERLKNNKPLLNEGLE
SVFRDVFPMKSSNGEVALEYEKYYIEYDSISFTEKECKRKGQSYEAVLKI
RLNLQFLTTGEIRQKDVYMGTIPLMTDRGTFIVNGAERVIVSQIHRSPGV
VFYKEKDLYYARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILVTLFLRA
LGLDTREKIIETFYKIRKIEVNDDTKREITGQYLATNITIKENMTYRAGD
KITLQDIEDFLQNGVKEINLIDFDGYDSVPGKHFISSDVILNCFEKEDAY
FALKDGFKELSRESVMLAVYSVLLPGEPISIDNAENDLRTVFFSEKRYDL
GHVGRYKLSKKFGLDDLTTSVLTMTDIVNTISHLLRIYDGHDVLDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPV
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVR
DVHYTHYGRMCPIETPEGPNIGLIVSLATYSKVNDYGFLETPYRKVIDGK
VTDDIEYLSAIDEEKKCIAQANASVSSDGNYTDDLVSVRISGDYTTMMPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPQPP
IVGTGMERIVAKDSGVVIKAKRPGRVVLATNKKIVIKPDNATSERDLDEY
ELYKYERTNQDTSFNHSVLVKNGQIVNKDEIIADGPATRYGELALGNNLL
VGFIPWNGFNYEDAILISERIVKEDLYTSIHIKEFSIEVRETKLGPEKVT
ADIPNVSGKILSKLDENGIVRIGTYVKPGDILIGKVTPKSEGDITPEFKL
LTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKDDVGNLPPGVDEILK
VYIAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPL
GVPSRMNIGQLMESQLGLAGKYLGEYYDVPVFESATNECIQEKLKKAGFN
ETSKAVLYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHARSTGPYSLVS
QQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIY
ENIVKGIPTNVSGIPESFNVLMQELRGLGFDLSIYDDNGNQIPLTEKEEE
LINKT
>BDU_382 rpoC, DNA-directed RNA polymerase beta' chain
MKEIKDFEKIRIKIASPDQIRSWSYGEVKKSETINYRTLRPEKDGLFCER
IFGTTKEWECYCGKFKSIRYKGIICDRCNVEVTHFKVRRERMGHIELSAP
VAHIWYYKYIPSRIGLLLDITASNLNSILYYEKYIVIEPGDTDLKKMQLL
NEDEYSEAKERYGMSFSASMGAEAIKTLLENLDLDELSSKLRLQMIDKDD
KTDKKLLRRLEIIENFKISGNKPEWMIMDVLPVIPPEIRPMVQLDGGRFA
TSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGTSNRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHQCGIPAKMALELFKPFVIRKLIESEAVFNIKRAKSLIEQEVDEVWQI
LDNVIKEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPAAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLY
YLTMERKNVMGEGRKFSNFNHVLLAINNKSLDYNARIYVKVGEEYIKTTA
GRVVFSEALPGKISFVNKTLSDYELQTLISEVYVIYGSSIVIEMLDIIKE
LGFKYATKFGCTISMSDIIVPQEKKVYVEKANREIAKIQNDYTKGVITGE
ERYNNVVSVWSKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQI
RQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTA
LKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVEALKNGEEIIEPLRE
KAVGSYSIERIKSPITGEIILDVNEEITEDKIKELETVGIDKLVIRSVLT
CEAEHGVCQKCYGRDFSNNKPVSIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKIALKNAFILNGLEGFNVQVDGGLLFTRKGVLRVINVIY
EESIKKIKKLKVSDSQKVIKGMSLFIDKSGVEVLSSHIGYIKIKDNKLMI
VSEEQEISLKVGTRLEINVGDYVEAGRVIGTFDPFAEPIIAEVKGKIKFK
DIILGTTLKEEINLETGNIEKRITDQVFESLDPRILIINDRGVEIASYVL
PGDAYLQVEDGQDIDIGDIIAKLSKGSEKTQDITGGLPRVNDLFETRIPK
NLTEMAKVSGVVQFKAIQKGKRLINVIDEYGVEHKHYIPAGKHLLVRDGD
VVRAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKH
IGVIIKQMMKKVKIVSVGDTNFVYNQKVDKHAFYEQNKRVIEQGGEPAVA
SPILIGITKASLNIDSFISAASFQETTKVLTDASIAGSIDDLRGLKENVV
IGHLIPTGTGMNLYKRVKVRENSNSEV
>BDU_715 rpoD, RNA polymerase sigma-70 factor
MNSVDNKDLQAFKKKNSKLIKTILNYLGDKKEITFEDLSTFLSGDMLEPD
NIDCIYGILENEGIGLINEKIGSDICDVDELDEASKLDSQCMMLDDAIQV
DDELDDKLDDFDDEVLDKEDYNSGYIKSGLLKDSNSEDPIRLYLKEIGKE
FLLTGNQEVELAKQMDSGESIIENILKNEGLVIENYYNLVNAIYSRVDKE
EFFKKDREREKDNNFDYYNKKKRITSFYKSLLKPFQDRLVKYVERKHRLY
ELGEDIFEESITNERLQIKELLKSIPLYQEELRLFSDDYIDSASKIKDLK
RQQKSILDRLKIDKVRNLRILGRDLAIPEKRERIEKSLNIREDLIKEQIT
EAQLAQKELERIEMYYEYPMDKIISMSEEILKGKQMMQHAKDQLIKANLR
LVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWWI
RQAITRSISDQARTIRVPVHMIEQINRLNRETRYLVQVLGKDPTDEELSI
RLGWDLKKVKTVKNVSREPVSLETPIGEEEDSVLSDFIEDKAIKNPAKHT
SFVVLQDQIRAVLGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTRE
RIRQIESKALRRLKNPKKTQKLKDYLEDLN
>BDU_775 rpoS, RNA polymerase sigma factor
MNIFSNEDLNIYLKSVREHRLITHEEEIELAKQIKLGSLKAKNQMINANL
RLVLKIIKRYAGKGLKIEDLIQEGNLGLIRAAEKYDPSKNTKFSTYASFW
IKQSLQRALNTKTRLVKVPYRKENLILQINKYLMEEEKSPKKEDIMERFN
LTTAQYVKIIPYLEKEYSLDKKIEGSENSTLLNLYEDNSFNPESTLEQNS
TLKHLNYILETKLNEKERYIIKKRYNLDNSDKKSTLKDISTELGISSETV
RQIEKRVLKKLREELYQ
>BDU_431 spo0J, stage 0 sporulation protein J
MDESLKMVDINLLDIDKSQPRKSINLAELEELSISIKENGILQPIIVYPN
NGRYNIIIGERRFRAAKLSGMSQIPVIEIEASTKDKDFMSLIENIQRENL
TPVEEAYAYKNLMDKHALTQKALSEKIGKNRSHVANLVRILELEQEILNS
LHKKEISLGHAKVLLSLKDNQDRYALYLLIIKKKLSVRDAENYVKNLYKT
INDKSEISRDPFLNSIKEFLISRIQTKISIKGSKEKGKIEISYFTSSDLK
RIISIFENIK
>BDU_196 spoT, guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
MIQVYEIAYLLKINDIDKLKNIFKKTVDNTYQDDIQKKLIFKSLEISEQL
HYGQYRESKEPYVIHPIMVALFLIKFQLDFKTIIAGLLHDVLEDTSVQKE
EIIKEFDQEVFSLIDGVTKIHDLHNKTRAIKEANTISKMFFAMTHDIRII
IIKLADKLHNMATLSHLPKNRRERIARDCLATYVPIAERLGISSLKIYLE
DLSLKYLYPKEYKEIKNFLSATKIEREKKLYKGKLIIEKELKKIGIDVTI
TVRSKHFYSIFRKMKTRNNNISQIFDTLGIRIICKKQKECYEILEIVHKV
WKPIPGRLKDYIAIPKENKYQSLHTTVRIPEDNQLIEIQIRTEEMDKIAK
YGVAAHWLYKEQVELKADDISFINRIKKWQQESANKNQYSMHDIHKELLN
TFIYVYTPEGEIVELPFGSNSIDFAYTIHTDIGDQALYAKINGKISSLTK
PLKNEQIVEIFTSEEAKPDVIWLNSVRTKKARSKIRSWLNKNDNTIFVDN
NIIAYLIGENKEQKRLFSLFKSLTKSKLKSITTASDCNPLTGEDIIGLIQ
KDTIVVHKENCKEITYQKKNHLVEVEWEATPTRKVYHIIIFLKNLKDLFN
YLDNLFTTFDVRLISEKIEDCGNGHGIINIIILSNHKNVSMIFNSLKENP
NVLQIMQVEEDIKNYDN
>BDU_9001 vlp-d, vlp protein, delta subfamily
MKREDKMWDRMRMKGIILMMMIVMMMGCNSGGVKDAEKVFLSEMVNLGKG
FLDVFVSFGDMITETLGIKADTKKSEIGAYFTKIENTMKIVKGKLSKILE
ENGKYEKVREKVGEFIGKISKIEEGAKEASKGANGDIIGNAKKGEDAVAA
SKDSVVSLVKGIKAIVEIVLGEKEGNAGNNIITEDKKDIGKLFGKKDGDR
AQEAEAAKVSASIGAVSGADILKAIAKSKEDPKADSTNGIEKATDAAEIA
VVPSVDDKKEIKEDTAKKDAIIAAGIALRGMAKEGKFAAKKDEDKSANAV
NGAVSSAVNKVLSTLVIAIRNTVDKGLKEINEVLGEIKQGEGVEAKVSK
>BDU_696 xylR-1, xylose operon regulatory protein
MQGENMVSIRGGNRKKILLSLKNMQYSRTDLARRLSLTNAAVTILTNHMI
KENILVEVGSKESDIKKHGRKEILLDINKDFAYSMGVIISSNYFQIGIAN
LKCEVLISETYSFEPPVSAYEILERIKDHMIEIIWKHNFSRDKFIGLGFS
ITGIIKDKESGIVNDSHGAWIEKDVPVKAILEEYFSLTVYLESYVKNLSL
AEFMGKNVDNIMFFDYTDTAELSIWSDGNVYSGFNNKSGMVSHMVIDYGG
EKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYDKYESRLKKVT
IYDIFALHDKYDFIHKIMEDTVKYLAIVIINIQRVLDFNYLVLYGQSFKL
KSFFDLLKEEIKRLNKESIILKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID
>BDU_843 xylR-2, xylose operon regulatory protein
MENCMKYYIAIDVGGTNTKYSLADGDGNFLDKFEVKSGATADDQVDILVD
IINYYKREYNVEGVAICIPGFVDPRGIVIRVNAIEGFTNYPLKERLENLT
GVNVEIENDANCVALAEKFKGNAVHSNDFIALTLGTGIGAGIFLNGKLVR
GYSFMSGEIGFMITRGLDNNIPFNCRWESLASVAALRRRVASRLEMELDN
VSGEYVFELADNGNIHVRNEIDYFFETLSFGIFNLIFVLNPEKILIGGGI
SSRSDLTSRIYDKLENLWSLELARIYDNDIRKLVKLEIAKFNNDSGKIGA
LYHYFAINRLLCNLDV


# Borrelia garinii High passage (300), PBi

>NC_006156.1_724 hypothetical protein
MKINKILILLFLFTKLSSIQVQVNQILTEISPISILSGNGKGSVYLKVSK
SSNYILTLDKSSNSDFVFKIYDISNKKYITDKIKRRDFKIRLDENFLYAI
IYVGTKNENIKFSLTDLDFSILNSDSLKAKTSKIEKEDLFFTLKDLPVLN
LTAKLKKYILRIYKNNIYIAYQLENSDDIKVAEFIKDVGWFNLDSSVNGN
IINIVNFDFSINSKGNLYIAFVTKSGSDFASELVVKKFNSRKWIDISPGY
IENFGSLLNISIDLKDRLYLTYLREIGGEYKINLISNMGYGNIWTDVIHS
YLSKGDSNVDSSNIGLISEPFLGIFYNYKSNNEIKSEFIVNNENAWANAN
ISSVYMANFIKGFFDSNFNQIIMSFLSENRPIVSICPLKSKRWVNISPNV
EMKGSSIDVGFYKNNLFLAFEDNNNVRLIYFKNKNWYFLNKLEYLKNNVA
SPQIGIYGNKGLVISTLSANSNELFFTLICQ
>NC_006156.1_784 hypothetical protein
MRKDLIFLVLIVLIIASVVIFFIRSSKKELVYFELNTKNNISFLFLVEDL
NKNLVSMQEIFINIKTGNLGFLDIPIHTGYEDLKGNISWFKDLYKKNSFT
KFLSKIHTQLSHESDYYIRFQKENFVKLIDYLGGVRLLVKNPVKVYSFED
SILIPSGTSNFDGDKAYDYLRYFNDVNQFEERVEFFKEFFKKLLFQISDF
GIENDNFFKIYSMIDTNLSEVVFKYIFKNYKINNDKIISINIKGQEEIFK
DNHNNLIKVVLPEYGGAILKESVDKLNKELVNEGPEEIVKIVVLNGTKVA
GLAKKTANIFNSLKFKVLNFDNADKNSYKNTLIINNSDNLEMAVRVGEVI
KATNIKPISEVQTKRLLELDNLDINPDVIVVLGDDFNGRYVKSK
>NC_006156.1_528 hypothetical protein
MNKSLLSELIIDIGNTSIAFALFEDNKVNLFIKMKTNLMLSYDEVYSFFK
ENFDFNVNQVFISSVVPVLNKIFENIIFSFFKIKPLFISFDLNYDLTFNP
YGSGKFLLGSDVFANLVAAIENYSLENVLVADLGTACTIFAVSRQDGILG
GLINSGPLINFNSLLDNAYLLNKFPISTPTNLLERTTSGSVNSGLFYQYK
YLIEGVYHDIKKIYKRGFNLIITGGNANLLLPLIEVEFIFNIHLTVEGIR
ILGNSIVVKFVN
>NC_006156.1_343 fibronectin/fibrinogen-binding protein, putative
MSLNYVEINTLIKEIPFANSLIKEIIQPDYKSLILEIYNKIDNKKFKILI
SLNPSTTRFHITRKNFKKNALKLRFSDFLKSKIQNGKILKASQMKNERII
YLEIFKKDIIILFIKLWPSSPNIIATNQNFKILDAYYRRPKAKETTGETF
LKAKEIHESNKMPDKKIMGLKEEYDNTSHKSYSEFLENYYESLSNQIKKN
NIKELLIEKYKKELIALEKRIGSLKQQIKLIKNIENEKEKGELILLNINK
IQKGIKEIALLNYKEEKIKISLNQSLSPKENALQYFKAYKKGKNSFETIQ
NQLKDNLDKFNLIKSKINMLKIKNFIPKEEYNQEETAIKKKEKTPKIGLH
FTSCGFEILIGRNAKENDELLRRCVKGNDYWLHTRDYPGAYVFIRNQKNK
TPCLDVLLAAGNLCVFYTKLAKKSGKADLYYTQVKNLRRVKNGKLGLVIP
KAEKNLHIKLDEDLIKKIKNKT
>PBI300a20b10.r1_29 hypothetical protein
MILRQKDIDLNYQRFLQLGYIRNDYYILNPCKILGFYKIFSKVRYESPLY
LPVEGEEFKITEIKLKDQSFIHFIEIDKSKVLYDSLDLKFKGKKFKIISK
MIFNYFI
>NC_006156.1_733 hypothetical protein
MLIDIDQIKIKKRIRKNVGDIETLKNSIIKHGLIYPIIIDKNKNLIAGFR
RYQALKEIGYKEAEVKVISIENKKTLLEIEIDENNVRKSFTKSEANEGEA
YLKIYSESNVIIRFIKFIILKIKNMWKRKNRKI
>NC_006156.1_823 hypothetical protein
MTKVPLKKIQDFDGNFYELVVATIIRTEQIIDNISLAEHAVFDDKILGQA
FNDVLTGKFSYSIEGR
>NC_006156.1_237 hypothetical protein
MGRLFLLYFLCSFVFLNLFAQGSSSYTDKQKELAIFYYEVGQRYINVGKI
KKGKLFQAKALKFYPDLKKGVDIKLVVKELDTRIKDDNSKVVMLENVKLE
EIPGIVHEKIEINDFTNAPKIGYLAERERSKNQDKIIKFQFGKFTRALIS
QKFDLFDSVVADKVDVMGQFESKGDFISALSRASSKVDADELEYLSVDDY
YDLKSLKISKSNDTAFAVNVNTKKNDVTKNFPFWKEHQTLIFTKEDDNNW
FLSSIK
>NC_006156.1_351 transcription factor, putative
MAFLLNQSVVYPMHGVGTIKDIRTKEFNGEIIDYYEIHFPFSDMIFMVPV
AKVDDFGIRALVSREKVEEVFDVIKEFEGQIDSKKIKDGGHEFYKKSDIL
DTAKLYKFLYKKSTQKELPFYEKRILNDFELILEHEISLALQISFEEAKE
KIKNILVDNKKA
>NC_006156.1_735 hypothetical protein
MLLSRKIRDYGAKYRGKEIKMSTEINSFLNLRNTIEMRIGAYSVLGVIYS
ISMDSLKLIFQEDTVLPALAKNKNLGSLQLKKNSDPNNNVAFSPFLSVKL
LSASAYSSQNKEYNLLTLEFLSPMPEEIAIKVGKLLDLKLGQNQRIHERI
IVDKDSIRKLKIDSDKAFIKFNGSKHKCLIKDLSYGGALVISSFDYGDFK
EDSIDLIFSFEFMDKEIFIEGKSKSLSVIQTPNGKVFALGIAFDEDKIPL
EYTMLIHDYFN
>NC_006156.1_133 greA, transcription elongation factor
MSNVTIEKLDSILQEDKWTRIVVNNYSLAKIKELDDLIDNIIDEGLTEDV
LDICGRHLKDVKKSIAGLYISGMLIYSRRPLNDMNLLAVIDLFSQNLKWA
LVEHICNEMLSISENKHALYTLAKIYAQNNENDKLPSIWTRIVEADIDDT
VFVRQLATYYETIDLQKSIFYFRKAIYRFIDKKQMSGIREVWAKLIHYVS
DDFDSFLLILQKIEKDLGFKKAIVLYEDLFDHYSLTDNVDETIEILKGIL
KLDNKNHKARENLVKFLRERYKDVNNIEDYLAKSDIENLDKNFVDVYSDF
EKYLFFAKGNFVYHQTWSVGIVRDVNDHGITVDFVSKRGHFIGFDMAMSA
LSPLSREDIRVLKAVTPKEELADRVKKDIEWAIKVIIKSYKAIDLKGIKK
ELVPSLMTQSSWNSWSLKAKQILKDNPHFVMDSGKLDCYIYNERSSNLNE
KMYDKFKIEKDFYKRYEIFINYCNVKGIVKDLHIEEEMLNYFLIYVNNFT
KVDHHVISSYVILKSLSNFSEELSLKVNIEKNVNLESLLKEYSKGIVDLF
DSILNAEIKKELIVLIKKELSNWILYYKELFPHSVNKKLVESLYKEDPRE
VEKLFNYVIKNYKIYKDAYIWILKHCKTYSIKLSYSDSELLANLIKILTD
SVIKINNKNNSVASKRIYKMVINLLVKDRYLKSVLECLRDEELAKRVYMT
CFYVKDFPPKDLLEIKSIIRQLFDSVEFEDEKMQLTGDRMEIGFLTILSS
LNKKQKELKHLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLTK
RLNSLMLEIENAKVIDTKDLQSSVVGFGTKVVILNEVTGKDESYLILGPW
ESNPDEGIISYKSPFGENLLDSKEGDSLDFIINNTNFRYFVKKIEPIKFS
>NC_006156.1_626 mfd, transcription-repair coupling factor
MNIDDELTKILKNNSNLKKMKEFLEQNTFFSLTGYEGFFKAFLIKKIKEY
SKTGKIILIVKDEHTLDNIKNDLKVITNQIFELSYFSPLVYKGIGSKSTI
FNERIKFLINFYKKNPGIYITVLKSLLSKIPDKNTLLNNICKIEKNTKIN
RKDIEKTLITLGYEKTLRVTIPGEFAIKGEIIDLYPFGEESPIKIVLNFD
KIEEIRKFNPLTQLKKDNEILEFQILPKKEIIWKNEIINSLKTKIKSVEY
NKIFEELNFKKEAKTEEMFYPLVANTYLSDEIEKQTPIVNFEINNFEKEI
EKIHQEYEKLYKEAKEASKNTIDPKRILLNSKTFNLKSDVLFSKIKSSKS
KEIVEFKIESERSFFSNIMLTKEEFKNWLKNGFKIIIAAESESQKEKLKY
IFKELPKVSIEVLKISSSLIIEEEKIAIILESNIFNTGQKINKAFESSKT
KAIDSFIEIEKNSHIVHINHGIGIFRQIKRIKTSSLEKDYIEIEYAEGEK
LFIPIEQTNLIQKYIGSNPKNIKLDKISSKTWIKNKANAKKRIDEIADKL
IELYSKRESIKGIKYPEDNELQLLFESEFPYDETPDQITAIKEIKEDMMS
FKVMDRLLCGDVGFGKTEVAMRAAFKAVMGNKQVIVLSPTTILAEQHFNT
FKKRFKNFPVKIEVLSRFIKNNSEKRILKELKSGEIDIIIGTHKILSKKF
TCKNLGLIIIDEEQRFGVKEKEKLKEIRISVDCLTLSATPIPRSLHMSLI
KLRDISVLKIPPKNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHN
IEELHYLKTLIEKLTPYARIAIIHGKLTGDEIENIMHNFIKKAYQILLAT
TIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQD
SEKLNERSIERLRAITEFSDLGAGFKIAMKDMEIRGVGNLLGREQHGEIE
SIGLDCYLTMLNKAIEKKMGKVSSEEEVDIEINHSGFIPDNYAKNEKDKI
LIYKKIFEIQTEEESKKIRSEIHDNFGPIPKEINSLLILAELKILAKKLN
ITKLKETNKTLEIEYKNAESIPMEKIIEILKKYPDLLMLNPSYQKSIFLS
FENIEKSDKMNYIYKNINLLETNT
>NC_006156.1_453 ntrA, RNA polymerase sigma-54 factor
MIKQKLKLSQNLNSIQLQTIKILSLNKKELTQLIVEESENNECLEIDSNK
IFFETLKTYRFKKVFYKEDNMIKNQHDIALEKTQTNTSLKEHLLLQLRIQ
RINEDELKIGEILINNLNNKGFHIINPYDLFKKEEKEKVKKIIELIQKFD
PIGICVPNIIESLILQAKHHKLETNIIKILEKAELLEKTQEKLKEELKIR
SKEFNKALEIIRQKLNPNPTLEFKDPEDTNFYVDPDILIINHNNKFEIKI
KEVNIFKKELKKTAINPQKQKKAKWLIESLRYRDEILAKIGIAIYTLQKE
FLRRGFKSLRPMNLSILSEKISVSKSTISRAIKNKYLKCEWGTILIKELF
SSVGGAKTNEFSKLSIKITVKKLLEVNKKMSDKAISAILKSKGISISRRT
VNKYRNELKSEKGKIYYGT
>NC_006156.1_803 nusA, N-utilization substance protein A
MIKGTGHMIVSIANDRSMSIESIRKTIKESVLIAYKKYFGSNENAFVKFD
DNTGDLVVYAKKKIVEEVKDSLLEILEKDISKENIVEGDYAYIEINPKVF
DRLSIQVAKQRTKNDLQGIEDNEILSEFKSKLNKVVIGYVQQNRNGDLYV
NLGNTDGIIPKKYQSPREVYSLNDKIRVLVYNVKKGKNGIEVILSRTHPK
FIEELLALEIPEIEEGIIKIHKIVRDPGYRIKVAVYSEKEEIDPVGPCIG
QKGVRIQSIIKELEGEKIDIIPYSKDIKEFIKDSLTPAKIDHVYILDEDL
HKALVVVSDDQLSLAIGKMGQNVRLANRLLDWAIDVKTSSQFAEMKANSE
FKQETLEMFDKVMQDVVEEEQFEDISKISDLKLLDSSVISNLSKEGLDDI
NNFLQADEEVLFNLGVSYEKQEEINKILKEGMIIIANENDESMEKVEEDQ
ELLCPECGVVINENMTSCPGCKIGLSFEFEEE
>NC_006156.1_107 nusB, N-utilization substance protein B
MHEVRVLAFQKIYSIDINQSAMDDIFDIFSIEDKGLDIENESIKSFYSSL
VNGTFNNLEYIDSLIKDISWNWSLDRMDKVDLAILRMGVYSLKFQNFENS
KRALIDEAILIAKKYGSKNSDKFINGILDALLKNMENCIEKK
>NC_006156.1_394 nusG, transcription antitermination factor
MSRAWYVIQTYSQYEKKIEQDIRLLISEGAFGSIVLDVKAPIEKVEEIRN
GKKRIRERKIWPGYILIELDLPEVGWKDVVANIIKVQGVINFVGVSKGQK
PIPINDEEVKSVFMLTGEIKANKSIFMLYDFEEGERVRIKGGPFDSFEGL
ISSIDYKRKKLKVAVQIFGRSTPVEVDFQHIEKI
>NC_006156.1_581 recG, DNA recombinase
MFLHEFEYELKGISGLGEKGVERLKNLQILNVKDLIEFFPVKYEDRQNIQ
TFPDFSKVKSFDMMTVFTVIGHKKFGDSSKKNLKLTARSINDESFEILLF
NRAFLENVFRIDKKFYIYSKFTYNDYSGLWSCSNFDSEVFSDSPERFKKI
LPVYSLTEGLTSKKISLYVREALEYFFKFGQTDIPKFLIEKYSLLSLSEA
LKEIHFPSSLEMLERAKKTLIYREIFLLQFFSRYRSSKVLFREKKHLSRD
LLERVVLSLPFELTEDQKISVDEIFSDLSSSKPMNRLLQGDVGSGKTLVA
LLSGLPLIEAGYQVAFMAPTDLLARQHYDNLSNILSSFNISVTLLTGSLK
KKDKEQALESIKSGVSGLIVGTHSIFYESTEFKRLAYVIIDEQHKFGVVQ
REELKNKGEGVDILLMSATPIPRSFALTLFGDLEVSLIKTLPKGRLPITT
YLAKHGNEDKVYDFLRKELLKGHQVYFVYPLISSSEKFELKDVNNMYLKL
KEVFSEYVVDMLHSKLPSDLKEEIMKNFYSKKVDILVATSVIEVGIDCPN
ATCMVVEHAERFGLSTLHQIRGRIGRSNLQSFFFLLYKEPLTSAGKFRLK
TIKENLDGFKIAEEDLRLRGPGNLFGLEQAGYLKLKISNFVDDRDVIVLI
RKELDLFFDDNSSYDKLDIDLLDNLFCSYLNVGRSI
>NC_006156.1_229 rho, transcription termination factor Rho
MDKKNVGFDLESEIRRLDVSKEFKIEDNLKKKVVKVVAKKDSASNVTKSA
DLSSAKDSNGVLFSEFDYDIPASGLENNIKTLEQSNIIKFFNGKDYVEIE
KLYDKPITEVRKIVEGLGTNHTIAVTMKKTELIFLLVKILSENNINVLFT
GVLDVLSDGYGFLRTASNSYLSGGNDVYVSPSQIRLFNLRTGDILYGQIR
SPRDGERFFAMVKIKSINNQDPTFAQNRIPFDNLTPLYPNIKLNLEYENC
NISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVE
NKKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSAR
NIEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLF
PAINIKKSGTRKEELLLSEEERSKILLIRRILGGVDDYEGVEVLIEKMKK
SKNNEIFLKTMSNGN
>NC_006156.1_708 rnc, ribonuclease III
MKKKSSDFCFGSERKAQLSEFLENLSIDFNNFDLLNTALSHSSYSNELDQ
KADNNERLEFLGDSVLNLIITDHLYKTYPNKSEGELSKARSYIVSEDSLS
SIAREIDLGSYILLGRGEESNDGRNKKGILADAIEAFVGAIYLDSGFSMA
TEFVVGLFDMYIRLMFNRGDFKDYKSLLQEYVQKKYKISPSYKLDKEIGP
DHDKVFCVELYVGEKFISNGKGKSKKEAEMRAAEVALKAMEDINL
>NC_006156.1_505 rpoA, DNA-directed RNA polymerase
MPVEKFLKDFTIPEKIEFLKSQDDGSYGKFTIYPFERGFGVTIGNTLRRV
LLSSIEGYAITAMRIQSNNKDSSSKVVSSEFDLIPGVSEDTLEVIANIKN
IHLKLGEGEQRKIISFSVSGKDTKVLKASHFERDGVEVFNRDLVIATLSQ
DVNLDLEFQINYGRGYVSSEQNSKYLEEVNVIALDSIFSPIEKVSYSVED
TRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIIREFLFPLIDFEDNIN
TSFEKSKSESSNLLDMSIEKLDLSVRSLNCLAKENVRTLGELISKNAEEL
SKARNFGKKSLEEIIEKLSSYQLFLGMSKEDALFVLSKNVKISE
>NC_006156.1_389 rpoB, DNA-directed RNA polymerase
MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKNKKPLLNEGLE
SVFRNIFPIKSGNGDVALEYERYYIENDALNFTEKECKRKGQSYEAVLKV
RLNLQFLTTGEIRQKDVYMGTIPLMTERGTFIINGAERVVVSQIHRSPGV
VFYKEKDLYSARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILITLFLRA
LGFDTREKIIETFYNIKKIKVEDSTKRDLPGQYLAKSINIRENMYYRAGD
KITLQDVEDFLQNGVNEIELVDFDGYDAISGKCFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYGALFPGEPISIDNAENDLKTIFFSERRYDL
GRVGRYKLSKKFGFDDLSTSVLTMYDIVNTISHLLRIYEGHDILDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPI
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVR
DVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLETPYRKVVNGE
VTDELEYLSAIDEEKKCIAQANAAFNSNGKYLEDLVSVRISGDYTTTNPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPP
IVGTGMESVVAKDSGVVVKAKRSGEVILATSSKIVVKPFESENAKDLDEY
HIVKYERTNQDTCFNQSVLVKEGQKVESGEIIADGPATRYGELALGNNLL
LGVIPWNGFNYEDAILISDRIVKEDLYTSIHIKEFSIEVRETKLGPEKVT
GDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKSEGDITPEFRL
LTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPL
GVPSRMNIGQLMESQLGLAGKYLGESYNVPVFESATNEQIQEKLKKAGFN
PTSKEILYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHARSTGPYSLVS
QQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIY
ENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDNGNQVPLTEKEEE
LINKG
>NC_006156.1_388 rpoC, DNA-directed RNA polymerase
MKEIKDFEKIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCER
IFGTTKEWECYCGKFKSIRYKGIICDRCNVEVTHFKVRRERMGHIELAAP
VAHIWYYKYIPSRIGLLLDITASSLNSILYYEKYVVIEPGDTDLKKMQLL
NEDEYIEARERYGMSFNASMGAEAIKTLLENLDLDELSSKLRIQMIDKDD
KTDKKLLRRLEIIENFKVSGNKPEWMIMEVLPVIPPEIRPMVQLDGGRFA
TSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHQCGLPAKMALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQI
LDFVIKEHPILLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPSAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLY
YLTMEKKNIVGEGKKFLNFSNVILAINNRSLDYNASIYVKIDGEYKKTTA
GRVIFNEALPKGIEFVNKTLSDLELQILISKVYVVHGSSTVIEMLDIIKE
LGFKYATKFGCTISMSDIIVPDEKKTYIDRANKEIAKIQNDYAKGVITGE
ERYNNVVSVWLKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQI
RQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTA
LKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVETVKNGEEILESLKE
KAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGIEKLVIRSVLT
CEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKISLKNAFILNSIEGFNVNVDNGILFTRKGTLKIINVFY
EEKIKNIKEIKVLDSQRVIKGIPLFVNKKGVEILSSYIGYAKLRDDKFLI
VSEEQEVALKAGTKLEIGVGDYVESGKVIGTFDPFAEPIIAEVKGKIKFK
DIILGTTLKEEINTETGNVEKRITDNVFESLDPRIFIIDSSGMEVASYVL
PGDAYLQVEDGQNINIGDVIAKLSKGSEKTQDITGGLPRVNDLFETRIPK
NLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD
VVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKH
IGVIIKQMMKKVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIA
SPILIGVTKTSLNIDSFISAASFQETTKVLTDASIAGKIDDLRGLKENVV
IGHLIPTGTGMGLYKKIKVSENIDAKV
>NC_006156.1_714 rpoD, RNA polymerase sigma-70 factor
MSDLEKKYSKLIEGIVTHLGDRKSLSFSELSNLLPDDILEPEILDFICSI
LEDRGIILVNKISELDLVGTEDGNDEEEESEIESDRNFMILDDGFQSDEE
DIDIDGKLDDCDEEDISVKDDLGSGYIKSNALKDSHSEDPIKLYLKEIGK
EFLLTGNQEVELAKQMDSGESIIENILKNEGLVIENYYNLINTIYSRMER
EEFFKREKDKDKESNPDYYNKKKRIASFYKIPLKPIQDRLISYVDNKHRV
YELGGDIFEKNLKSERLALKELLRDVPLYQDELRIFSDDYIDSANKIKDL
QRQQRIILSRLKIEKIRDLRVLGRDLTIAEKRIEIEKSLKLKEDAIKEQI
TEAQLAQKELERIEMYYEYPMDKIISMSEEIAKGKQMMQHAKDQLIKANL
RLVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWW
IRQAITRSISDQARTIRVPVHMIEQINRLNRETRYLVQVLGKDPTDEELS
DRLGWELKKVKTVKSVSREPVSLETPIGEEEDSVLSDFIEDKAIKNPANH
TSFVVLQDQIRSILGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTR
ERIRQIESKALRRLKNPKKTQKLKDYLEDLN
>NC_006156.1_771 rpoS, RNA polymerase sigma factor
MNIFSNEDLNIYLKSVREHKLITHEEEIKLASQIQRGNAQAKNKMINANL
RLVLKIIKRYAGKGLKIEDLIQEGNLGLIRAAEKYDPNKNTKFSTYASFW
IKQSLQRALNTKTRLVKVPYRKENLILQINKYLTEEEKSPKKEEIMKRFN
LSPAQYIKIIPYLEKEYSLDKEIEGSENSTLLNLYEDNSFNPEITLEQDS
TIKHLNYVLETKLNEKERYIIKKRYNLDNNPKKSTLKDISTELGISSETV
RQIEKRVLKKLKEEIN
>NC_006156.1_437 spo0J, stage 0 sporulation protein J
MDGVYKMIDIQLLDIDNDQPRKFVSPVELEELSISIKENGILQPIIVCKA
NERYKIIVGERRFRAAKLIQMTNIPVIEVNIKESCRDFMPLVENIQRENF
TPVEEAYAYKNVMNKYSLTQKDLSEKIGKSRAYISNLVRILDLEQEILNA
VHRKEISFGHAKVILSLKDKQDRYNLYLMIVKKKFSVRDAEKYVKNFYKS
IVRKRELEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIEYFTAGDLR
RIVSFFGNIS
>NC_006156.1_195 spoT, guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
MIQAYEIAHLIKINDLEKAKNIFKKTVENTYKDEFERKSIFKALEIAEQL
HYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIEKE
EIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMFFAMTHDIRII
IIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLE
DLSFKHLYPKDYKEIKNFLSETKIEREKKLYKGKLSIEKELQKSGIEAEI
TVRSKHFYSIFRKMQTRTNKLTQIFDTLGIRIICKKQKECYEILEIVHRV
WKPIPGRLKDYIASPKENKYQSLHTTVRIPEDNQLIEIQIRTEEMDRIAN
YGVAAHWIYKEQIALKADDLSFINRIKKWQQESANKSQYSMNDIHKELLN
TFIYVYTPEGEVVELPFGSNSIDFAYIIHTDIGDQALYAKINGKISSITK
PLKNEQIVEIFTSKDSKPDVIWLNSVRTKKARSKIRSWLNKNDNTIFVDN
NIIAYLVGANKEQRKLFSLFKAYTKTKIKRIAIDSECNPTTGEDIVGIIH
KDEIIVHNENCQKLKYYKKNQLIEVEWEATPTRKVHHIILLLKELKGIFS
YLENIFTINDVRLISEKIEDCGNGHGITNIIVSSNAKNIAKIISSLKENP
NILQIMQVEEDIKNYDN
>NC_006156.1_696 xylR-1, xylose operon regulatory protein
MQGENMVSIRGGNRRKILLSLKNMQYSRTDLARKLTLTNAAVTILTNQMI
KENLLIEVGSRVSDIKKHGRKEILLDINKDYAYSMGVIISSNYFQIGIAN
LKCEVLISETHSFEPPVSAYEILEKIKDHMIEIIWKHNFSRDKFIGLGFS
ITGLIKDKESGIVNDSYGAWIEKDVPVKRILEEYFSLTVYLESYVKNLSL
AEFMGKNIDNIMFFDYTDTAELSIWSDGNVYPGFNNKSGMVSHMIIDYEG
EKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYEKYEGRLKKVT
IYDVFSLYEKYDFVNKIMQDTVKYLAIIIINIQRMLDFNYLVLYGQSFKL
KAFFDSLKEEIKKRNKENIILKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID
>NC_006156.1_836 xylR-2, xylose operon regulatory protein
MKRYLAIDIGGTSTKYSLADSSGVFFDKNEISTGATSDEQLNILVKLIDS
YKKSNDIAGVAICIPGFVDLKGNVIRVNAISGFVNYPLKEKLEFLTGVSI
EIENDANCVALAEKFKGNAIDSNDFIAITLGTGIGAGIFTNGKLLRGNSF
MSGEVGFMITRGISNNIPFNCRWEAISSVLALRKRVAMRLEKPLKEISGE
YVFNLAENGNVHAKNEVDRFFENLSFGIFNLTFILNPEKILIGGGISARP
DLIDRIYEKLENLWSLEMAFINNNDIKNLVTLEPTKFNNESGKIGALYHY
FTCKKQNNDSV


# Borrelia garinii, PBi

>BG0241 hypothetical protein
MGRLFLLYFLCSFVFLNLFAQGSSSYTDKQKELAIFYYEVGQRYINVGKI
KKGKLFQAKALKFYPDLKKGVDIKLVVKELDTRIKDDNSKVVMLENVKLE
EIPGIVHEKIEINDFTNAPKIGYLAERERSKNQDKIIKFQFGKFTRALIS
QKFDLFDSVVADKVDVMGQFESKGDFISALSRASSKVDADELEYLSVDDY
YDLKSLKISKSNDTAFAVNVNTKKNDVTKNFPFWKEHQTLIFTKEDDNNW
FLSSIK
>BG0356 transcription factor, putative
MAFLLNQSVVYPMHGVGTIKDIRTKEFNGEIIDYYEIHFPFSDMIFMVPV
AKVDDFGIRALVSREKVEEVFDVIKEFEGQIDSKKIKDGGHEFYKKSDIL
DTAKLYKFLYKKSTQKELPFYEKRILNDFELILEHEISLALQISFEEAKE
KIKNILVDNKKA
>BG0753 conserved hypothetical protein
MLIDIDQIKIKKRIRKNVGDIETLKNSIIKHGLIYPIIIDKNKNLIAGFR
RYQALKEIGYKEAEVKVISIENKKTLLEIEIDENNVRKSFTKSEANEGEA
YLKIYSESNVIIRFIKFIILKIKNMWKRKNRKI
>BG0038 hypothetical protein
MVKVLIASLINFSKELIRLYNCFYIYFCRFLFLFFFFTFLACSKASKDFI
VFNKDVKSSPKIDNPNSNVLEINKMEDFFGDIIDLKGYKILAVQQENLNL
DVYFEQVVLAQNFSNLNAYLFIIGFDPKIKVGTILFKTQIDIDPKNSYNM
YLEDITGDYDFNIVVQGFLKDKSVLYVFQKSVLNDVSSYKPIFFDKVNGT
VLINKYARSSAYEENRSRESYPISLEKYEKVGEDLIISKIEKYEYSHVQG
KYYLSSVSEKVGKIDNNIYKTLKNLSKDEVYRFLHGVWYDAYNYNKKQGK
EIDEVLFLSFGRQSSEINLFRKNSQEVAKIEYISKPAYNTLNVSAKSLFS
DLIVYNFWIKIVDKENIEIKIDTSTNSYDNSGFSGSFKRFDENASNVVKK
KGNNIYFIPSGNYAYKDKIYDFSYPHLTYIDENKIYYGIFNIFPLKNNFV
LEYEIDMGSYKLIESFFLEHIERVVQKQKFSTIILNPIKILKDDVSLVKG
QKLKLERIEKIG
>BG0536 conserved hypothetical protein
MNKSLLSELIIDIGNTSIAFALFEDNKVNLFIKMKTNLMLSYDEVYSFFK
ENFDFNVNQVFISSVVPVLNKIFENIIFSFFKIKPLFISFDLNYDLTFNP
YGSGKFLLGSDVFANLVAAIENYSLENVLVADLGTACTIFAVSRQDGILG
GLINSGPLINFNSLLDNAYLLNKFPISTPTNLLERTTSGSVNSGLFYQYK
YLIEGVYHDIKKIYKRGFNLIITGGNANLLLPLIEVEFIFNIHLTVEGIR
ILGNSIVVKFVN
>BG0744 hypothetical protein
MKINKILILLFLFTKLSSIQVQVNQILTEISPISILSGNGKGSVYLKVSK
SSNYILTLDKSSNSDFVFKIYDISNKKYITDKIKRRDFKIRLDENFLYAI
IYVGTKNENIKFSLTDLDFSILNSDSLKAKTSKIEKEDLFFTLKDLPVLN
LTAKLKKYILRIYKNNIYIAYQLENSDDIKVAEFIKDVGWFNLDSSVNGN
IINIVNFDFSINSKGNLYIAFVTKSGSDFASELVVKKFNSRKWIDISPGY
IENFGSLLNISIDLKDRLYLTYLREIGGEYKINLISNMGYGNIWTDVIHS
YLSKGDSNVDSSNIGLISEPFLGIFYNYKSNNEIKSEFIVNNENAWANAN
ISSVYMANFIKGFFDSNFNQIIMSFLSENRPIVSICPLKSKRWVNISPNV
EMKGSSIDVGFYKNNLFLAFEDNNNVRLIYFKNKNWYFLNKLEYLKNNVA
SPQIGIYGNKGLVISTLSANSNELFFTLICQ
>BG0807 hypothetical protein
MRKDLIFLVLIVLIIASVVIFFIRSSKKELVYFELNTKNNISFLFLVEDL
NKNLVSMQEIFINIKTGNLGFLDIPIHTGYEDLKGNISWFKDLYKKNSFT
KFLSKIHTQLSHESDYYIRFQKENFVKLIDYLGGVRLLVKNPVKVYSFED
SILIPSGTSNFDGDKAYDYLRYFNDVNQFEERVEFFKEFFKKLLFQISDF
GIENDNFFKIYSMIDTNLSEVVFKYIFKNYKINNDKIISINIKGQEEIFK
DNHNNLIKVVLPEYGGAILKESVDKLNKELVNEGPEEIVKIVVLNGTKVA
GLAKKTANIFNSLKFKVLNFDNADKNSYKNTLIINNSDNLEMAVRVGEVI
KATNIKPISEVQTKRLLELDNLDINPDVIVVLGDDFNGRYVKSK
>BGA20 conserved hypothetical protein
MILRQKDIDLNYQRFLQLGYIRNDYYILNPCKILGFYKIFSKVRYESPLY
LPVEGEEFKITEIKLKDQSFIHFIEIDKSKVLYDSLDLKFKGKKFKIISK
MIFNYFI
>BG0755 hypothetical protein
MLLSRKIRDYGAKYRGKEIKMSTEINSFLNLRNTIEMRIGAYSVLGVIYS
ISMDSLKLIFQEDTVLPALAKNKNLGSLQLKKNSDPNNNVAFSPFLSVKL
LSASAYSSQNKEYNLLTLEFLSPMPEEIAIKVGKLLDLKLGQNQRIHERI
IVDKDSIRKLKIDSDKAFIKFNGSKHKCLIKDLSYGGALVISSFDYGDFK
EDSIDLIFSFEFMDKEIFIEGKSKSLSVIQTPNGKVFALGIAFDEDKIPL
EYTMLIHDYFN
>BG0348 fibronectin/fibrinogen-binding protein, putative
MSLNYVEINTLIKEIPFANSLIKEIIQPDYKSLILEIYNKIDNKKFKILI
SLNPSTTRFHITRKNFKKNALKLRFSDFLKSKIQNGKILKASQMKNERII
YLEIFKKDIIILFIKLWPSSPNIIATNQNFKILDAYYRRPKAKETTGETF
LKAKEIHESNKMPDKKIMGLKEEYDNTSHKSYSEFLENYYESLSNQIKKN
NIKELLIEKYKKELIALEKRIGSLKQQIKLIKNIENEKEKGELILLNINK
IQKGIKEIALLNYKEEKIKISLNQSLSPKENALQYFKAYKKGKNSFETIQ
NQLKDNLDKFNLIKSKINMLKIKNFIPKEEYNQEETAIKKKEKTPKIGLH
FTSCGFEILIGRNAKENDELLRRCVKGNDYWLHTRDYPGAYVFIRNQKNK
TPCLDVLLAAGNLCVFYTKLAKKSGKADLYYTQVKNLRRVKNGKLGLVIP
KAEKNLHIKLDEDLIKKIKNKT
>BG0845 hypothetical protein
MTKVPLKKIQDFDGNFYELVVATIIRTEQIIDNISLAEHAVFDDKILGQA
FNDVLTGKFSYSIEGR
>BGA72 conserved hypothetical protein
MIKENILTKIKSNIIKFNITTILSLMCISCSLVDQIDTKLKSLTNPKENN
QNCLNQSHNLKPSNQKSLEKEDIISKLKAISKKLKAQEKKDNIEIAKIAA
AKLDFLDTFKASPYGTLYKDEKIVIKKIIYSSLNYNTQKINTLKEILEKL
YQYIDHERVPPLLIYFLHGTAFFIQKELEGCLELIQNGLHNLKQNEFELL
HGALEKSLTLKQEFAKKLNETIEAYNQNLYNIKTDMKQLTWQIYEVCKEL
GTFKPID
>BG0134 greA, transcription elongation factor
MSNVTIEKLDSILQEDKWTRIVVNNYSLAKIKELDDLIDNIIDEGLTEDV
LDICGRHLKDVKKSIAGLYISGMLIYSRRPLNDMNLLAVIDLFSQNLKWA
LVEHICNEMLSISENKHALYTLAKIYAQNNENDKLPSIWTRIVEADIDDT
VFVRQLATYYETIDLQKSIFYFRKAIYRFIDKKQMSGIREVWAKLIHYVS
DDFDSFLLILQKIEKDLGFKKAIVLYEDLFDHYSLTDNVDETIEILKGIL
KLDNKNHKARENLVKFLRERYKDVNNIEDYLAKSDIENLDKNFVDVYSDF
EKYLFFAKGNFVYHQTWSVGIVRDVNDHGITVDFVSKRGHFIGFDMAMSA
LSPLSREDIRVLKAVTPKEELADRVKKDIEWAIKVIIKSYKAIDLKGIKK
ELVPSLMTQSSWNSWSLKAKQILKDNPHFVMDSGKLDCYIYNERSSNLNE
KMYDKFKIEKDFYKRYEIFINYCNVKGIVKDLHIEEEMLNYFLIYVNNFT
KVDHHVISSYVILKSLSNFSEELSLKVNIEKNVNLESLLKEYSKGIVDLF
DSILNAEIKKELIVLIKKELSNWILYYKELFPHSVNKKLVESLYKEDPRE
VEKLFNYVIKNYKIYKDAYIWILKHCKTYSIKLSYSDSELLANLIKILTD
SVIKINNKNNSVASKRIYKMVINLLVKDRYLKSVLECLRDEELAKRVYMT
CFYVKDFPPKDLLEIKSIIRQLFDSVEFEDEKMQLTGDRMEIGFLTILSS
LNKKQKELKHLKEVEIPENSKEIGKARELGDLKENAEYHSAKEKQQFLTK
RLNSLMLEIENAKVIDTKDLQSSVVGFGTKVVILNEVTGKDESYLILGPW
ESNPDEGIISYKSPFGENLLDSKEGDSLDFIINNTNFRYFVKKIEPIKFS
>BG0642 mfd, transcription-repair coupling factor
MNIDDELTKILKNNSNLKKMKEFLEQNTFFSLTGYEGFFKAFLIKKIKEY
SKTGKIILIVKDEHTLDNIKNDLKVITNQIFELSYFSPLVYKGIGSKSTI
FNERIKFLINFYKKNPGIYITVLKSLLSKIPDKNTLLNNICKIEKNTKIN
RKDIEKTLITLGYEKTLRVTIPGEFAIKGEIIDLYPFGEESPIKIVLNFD
KIEEIRKFNPLTQLKKDNEILEFQILPKKEIIWKNEIINSLKTKIKSVEY
NKIFEELNFKKEAKTEEMFYPLVANTYLSDEIEKQTPIVNFEINNFEKEI
EKIHQEYEKLYKEAKEASKNTIDPKRILLNSKTFNLKSDVLFSKIKSSKS
KEIVEFKIESERSFFSNIMLTKEEFKNWLKNGFKIIIAAESESQKEKLKY
IFKELPKVSIEVLKISSSLIIEEEKIAIILESNIFNTGQKINKAFESSKT
KAIDSFIEIEKNSHIVHINHGIGIFRQIKRIKTSSLEKDYIEIEYAEGEK
LFIPIEQTNLIQKYIGSNPKNIKLDKISSKTWIKNKANAKKRIDEIADKL
IELYSKRESIKGIKYPEDNELQLLFESEFPYDETPDQITAIKEIKEDMMS
FKVMDRLLCGDVGFGKTEVAMRAAFKAVMGNKQVIVLSPTTILAEQHFNT
FKKRFKNFPVKIEVLSRFIKNNSEKRILKELKSGEIDIIIGTHKILSKKF
TCKNLGLIIIDEEQRFGVKEKEKLKEIRISVDCLTLSATPIPRSLHMSLI
KLRDISVLKIPPKNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHN
IEELHYLKTLIEKLTPYARIAIIHGKLTGDEIENIMHNFIKKAYQILLAT
TIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQD
SEKLNERSIERLRAITEFSDLGAGFKIAMKDMEIRGVGNLLGREQHGEIE
SIGLDCYLTMLNKAIEKKMGKVSSEEEVDIEINHSGFIPDNYAKNEKDKI
LIYKKIFEIQTEEESKKIRSEIHDNFGPIPKEINSLLILAELKILAKKLN
ITKLKETNKTLEIEYKNAESIPMEKIIEILKKYPDLLMLNPSYQKSIFLS
FENIEKSDKMNYIYKNINLLETNT
>BG0458 ntrA, RNA polymerase sigma-54 factor
MEESENNECLEIDSNKIFFETLKTYRFKKVFYKEDNMIKNQHDIALEKTQ
TNTSLKEHLLLQLRIQRINEDELKIGEILINNLNNKGFHIINPYDLFKKE
EKEKVKKIIELIQKFDPIGICVPNIIESLILQAKHHKLETNIIKILEKAE
LLEKTQEKLKEELKIRSKEFNKALEIIRQKLNPNPTLEFKDPEDTNFYVD
PDILIINHNNKFEIKIKEVNIFKKELKKTAINPQKQKKAKWLIESLRYRD
EILAKIGIAIYTLQKEFLRRGFKSLRPMNLSILSEKISVSKSTISRAIKN
KYLKCEWGTILIKELFSSVGGAKTNEFSKLSIKITVKKLLEVNKKMSDKA
ISAILKSKGISISRRTVNKYRNELKSEKGKIYYGT
>BG0826 nusA, N-utilization substance protein A
MIKGTGHMIVSIANDRSMSIESIRKTIKESVLIAYKKYFGSNENAFVKFD
DNTGDLVVYAKKKIVEEVKDSLLEILEKDISKENIVEGDYAYIEINPKVF
DRLSIQVAKQRTKNDLQGIEDNEILSEFKSKLNKVVIGYVQQNRNGDLYV
NLGNTDGIIPKKYQSPREVYSLNDKIRVLVYNVKKGKNGIEVILSRTHPK
FIEELLALEIPEIEEGIIKIHKIVRDPGYRIKVAVYSEKEEIDPVGPCIG
QKGVRIQSIIKELEGEKIDIIPYSKDIKEFIKDSLTPAKIDHVYILDEDL
HKALVVVSDDQLSLAIGKMGQNVRLANRLLDWAIDVKTSSQFAEMKANSE
FKQETLEMFDKVMQDVVEEEQFEDISKISDLKLLDSSVISNLSKEGLDDI
NNFLQADEEVLFNLGVSYEKQEEINKILKEGMIIIANENDESMEKVEEDQ
ELLCPECGVVINENMTSCPGCKIGLSFEFEEE
>BG0108 nusB, N-utilization substance protein B
MHEVRVLAFQKIYSIDINQSAMDDIFDIFSIEDKGLDIENESIKSFYSSL
VNGTFNNLEYIDSLIKDISWNWSLDRMDKVDLAILRMGVYSLKFQNFENS
KRALIDEAILIAKKYGSKNSDKFINGILDALLKNMENCIEKK
>BG0395 nusG, transcription antitermination factor
MSRAWYVIQTYSQYEKKIEQDIRLLISEGAFGSIVLDVKAPIEKVEEIRN
GKKRIRERKIWPGYILIELDLPEVGWKDVVANIIKVQGVINFVGVSKGQK
PIPINDEEVKSVFMLTGEIKANKSIFMLYDFEEGERVRIKGGPFDSFEGL
ISSIDYKRKKLKVAVQIFGRSTPVEVDFQHIEKI
>BG0593 recG, DNA recombinase
MFLHEFEYELKGISGLGEKGVERLKNLQIFNVKDLIEFFPVKYEDRQNIQ
TFPDFSKVKSFDMMTVFTVIGHKKFGDSSKKNLKLTARSINDESFEILLF
NRAFLENVFRIDKKFYIYSKFTYNDYSGLWSCSNFDSEVFSDSPERFKKI
LPVYSLTEGLTSKKISLYVREALEYFFKFGQTDIPKFLIEKYSLLSLSEA
LKEIHFPSSLEMLERAKKTLIYREIFLLQFFSRYRSSKVLFREKKHLSRD
LLERVVLSLPFELTEDQKISVDEIFSDLSSSKPMNRLLQGDVGSGKTLVA
LLSGLPLIEAGYQVAFMAPTDLLARQHYDNLSNILSSFNISVTLLTGSLK
KKDKEQALESIKSGVSGLIVGTHSIFYESTEFKRLAYVIIDEQHKFGVVQ
REELKNKGEGVDILLMSATPIPRSFALTLFGDLEVSLIKTLPKGRLPITT
YLAKHGNEDKVYDFLRKELLKGHQVYFVYPLISSSEKFELKDVNNMYLKL
KEVFSEYVVDMLHSKLPSDLKEEIMKNFYSKKVDILVATSVIEVGIDCPN
ATCMVVEHAERFGLSTLHQIRGRIGRSNLQSFFFLLYKEPLTSAGKFRLK
TIKENLDGFKIAEEDLRLRGPGNLFGLEQAGYLKLKISNFVDDRDVIVLI
RKELDLFFDDNSSYDKLDIDLLDNLFCSYLNVGRSI
>BG0233 rho, transcription termination factor Rho
MDKKNVGFDLESEIRRLDVSKEFKIEDNLKKKVVKVVAKKDSASNVTKSA
DLSSAKDSNGVLFSEFDYDIPASGLENNIKTLEQSNIIKFFNGKDYVEIE
KLYDKPITEVRKIVEGLGTNHTIAVTMKKTELIFLLVKILSENNINVLFT
GVLDVLSDGYGFLRTASNSYLSGGNDVYVSPSQIRLFNLRTGDILYGQIR
SPRDGERFFAMVKIKSINNQDPTFAQNRIPFDNLTPLYPNIKLNLEYENC
NISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVE
NKKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSAR
NIEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLF
PAINIKKSGTRKEELLLSEEERSKILLIRRILGGVDDYEGVEVLIEKMKK
SKNNEIFLKTMSNGN
>BG0727 rnc, ribonuclease III
MKKKSSDFCFGSERKAQLSEFLENLSIDFNNFDLLNTALSHSSYSNELDQ
KADNNERLEFLGDSVLNLIITDHLYKTYPNKSEGELSKARSYIVSEDSLS
SIAREIDLGSYILLGRGEESNDGRNKKGILADAIEAFVGAIYLDSGFSMA
TEFVVGLFDMYIRLMFNRGDFKDYKSLLQEYVQKKYKISPSYKLDKEIGP
DHDKVFCVELYVGEKFISNGKGKSKKEAEMRAAEVALKAMEDINL
>BG0514 rpoA, DNA-directed RNA polymerase
MPVEKFLKDFTIPEKIEFLKSQDDGSYGKFTIYPFERGFGVTIGNTLRRV
LLSSIEGYAITAMRIQSNNKDSSSKVVSSEFDLIPGVSEDTLEVIANIKN
IHLKLGEGEQRKIISFSVSGKDTKVLKASHFERDGVEVFNRDLVIATLSQ
DVNLDLEFQINYGRGYVSSEQNSKYLEEVNVIALDSIFSPIEKVSYSVED
TRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIIREFLFPLIDFEDNIN
TSFEKSKSESSNLLDMSIEKLDLSVRSLNCLAKENVRTLGELISKNAEEL
SKARNFGKKSLEEIIEKLSSYQLFLGMSKEDALFVLSKNVKISE
>BG0390 rpoB, DNA-directed RNA polymerase
MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKNKKPLLNEGLE
SVFRNIFPIKSGNGDVALEYERYYIENDALNFTEKECKRKGQSYEAVLKV
RLNLQFLTTGEIRQKDVYMGTIPLMTERGTFIINGAERVVVSQIHRSPGV
VFYKEKDLYSARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILITLFLRA
LGFDTREKIIETFYNIKKIKVEDSTKRDLPGQYLAKSINIRENMYYRAGD
KITLQDVEDFLQNGVNEIELVDFDGYDAISGKCFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYGALFPGEPISIDNAENDLKTIFFSERRYDL
GRVGRYKLSKKFGFDDLSTSVLTMYDIVNTISHLLRIYEGHDILDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPI
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVR
DVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLETPYRKVVNGE
VTDELEYLSAIDEEKKCIAQANAAFNSNGKYLEDLVSVRISGDYTTTNPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPP
IVGTGMESVVAKDSGVVVKAKRSGEVILATSSKIVVKPFESENAKDLDEY
HIVKYERTNQDTCFNQSVLVKEGQKVESGEIIADGPATRYGELALGNNLL
LGVIPWNGFNYEDAILISDRIVKEDLYTSIHIKEFSIEVRETKLGPEKVT
GDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKSEGDITPEFRL
LTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPL
GVPSRMNIGQLMESQLGLAGKYLGESYNVPVFESATNEQIQEKLKKAGFN
PTSKEILYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHARSTGPYSLVS
QQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIY
ENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDNGNQVPLTEKEEE
LINKG
>BG0389 rpoC, DNA-directed RNA polymerase
MKEIKDFEKIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCER
IFGTTKEWECYCGKFKSIRYKGIICDRCNVEVTHFKVRRERMGHIELAAP
VAHIWYYKYIPSRIGLLLDITASSLNSILYYEKYVVIEPGDTDLKKMQLL
NEDEYIEARERYGMSFNASMGAEAIKTLLENLDLDELSSKLRIQMIDKDD
KTDKKLLRRLEIIENFKVSGNKPEWMIMEVLPVIPPEIRPMVQLDGGRFA
TSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHQCGLPAKMALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQI
LDFVIKEHPILLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPSAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLY
YLTMEKKNIVGEGKKFLNFSNVILAINNRSLDYNASIYVKIDGEYKKTTA
GRVIFNEALPKGIEFVNKTLSDLELQILISKVYVVHGSSTVIEMLDIIKE
LGFKYATKFGCTISMSDIIVPDEKKTYIDRANKEIAKIQNDYAKGVITGE
ERYNNVVSVWLKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQI
RQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTA
LKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVETVKNGEEILESLKE
KAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGIEKLVIRSVLT
CEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKISLKNAFILNSIEGFNVNVDNGILFTRKGTLKIINVFY
EEKIKNIKEIKVLDSQRVIKGIPLFVNKKGVEILSSYIGYAKLRDDKFLI
VSEEQEVALKAGTKLEIGVGDYVESGKVIGTFDPFAEPIIAEVKGKIKFK
DIILGTTLKEEINTETGNVEKRITDNVFESLDPRIFIIDSSGMEVASYVL
PGDAYLQVEDGQNINIGDVIAKLSKGSEKTQDITGGLPRVNDLFETRIPK
NLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD
VVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKH
IGVIIKQMMKKVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIA
SPILIGVTKTSLNIDSFISAASFQETTKVLTDASIAGKIDDLRGLKENVV
IGHLIPTGTGMGLYKKIKVSENIDAKV
>BG0734 rpoD, RNA polymerase sigma-70 factor
MSDLEKKYSKLIEGIVTHLGDRKSLSFSELSNLLPDDILEPEILDFICSI
LEDRGIILVNKISELDLVGTEDGNDEEEESEIESDRNFMILDDGFQSDEE
DIDIDGKLDDCDEEDISVKDDLGSGYIKSNALKDSHSEDPIKLYLKEIGK
EFLLTGNQEVELAKQMDSGESIIENILKNEGLVIENYYNLINTIYSRMER
EEFFKREKDKDKESNPDYYNKKKRIASFYKIPLKPIQDRLISYVDNKHRV
YELGGDIFEKNLKSERLALKELLRDVPLYQDELRIFSDDYIDSANKIKDL
QRQQRIILSRLKIEKIRDLRVLGRDLTIAEKRIEIEKSLKLKEDAIKEQI
TEAQLAQKELERIEMYYEYPMDKIISMSEEIAKGKQMMQHAKDQLIKANL
RLVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWW
IRQAITRSISDQARTIRVPVHMIEQINRLNRETRYLVQVLGKDPTDEELS
DRLGWELKKVKTVKSVSREPVSLETPIGEEEDSVLSDFIEDKAIKNPANH
TSFVVLQDQIRSILGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTR
ERIRQIESKALRRLKNPKKTQKLKDYLEDLN
>BG0794 rpoS, RNA polymerase sigma factor
MNIFSNEDLNIYLKSVREHKLITHEEEIKLASQIQRGNAQAKNKMINANL
RLVLKIIKRYAGKGLKIEDLIQEGNLGLIRAAEKYDPNKNTKFSTYASFW
IKQSLQRALNTKTRLVKVPYRKENLILQINKYLTEEEKSPKKEEIMKRFN
LSPAQYIKIIPYLEKEYSLDKEIEGSENSTLLNLYEDNSFNPEITLEQDS
TIKHLNYVLETKLNEKERYIIKKRYNLDNNPKKSTLKDISTELGISSETV
RQIEKRVLKKLKEEIN
>BG0441 spo0J, stage 0 sporulation protein J
MDGVYKMIDIQLLDIDNDQPRKFVSPVELEELSISIKENGILQPIIVCKA
NERYKIIVGERRFRAAKLIQMTNIPVIEVNIKESCRDFMPLVENIQRENF
TPVEEAYAYKNVMNKYSLTQKDLSEKIGKSRAYISNLVRILDLEQEILNA
VHRKEISFGHAKVILSLKDKQDRYNLYLMIVKKKFSVRDAEKYVKNFYKS
IVRKRELEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIEYFTAGDLR
RIVSFFGNIS
>BG0196 spoT, guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
MIQAYEIAHLIKINDLEKAKNIFKKTVENTYKDEFERKSIFKALEIAEQL
HYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIEKE
EIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMFFAMTHDIRII
IIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLE
DLSFKHLYPKDYKEIKNFLSETKIEREKKLYKGKLSIEKELQKSGIEAEI
TVRSKHFYSIFRKMQTRTNKLTQIFDTLGIRIICKKQKECYEILEIVHRV
WKPIPGRLKDYIASPKENKYQSLHTTVRIPEDNQLIEIQIRTEEMDRIAN
YGVAAHWIYKEQIALKADDLSFINRIKKWQQESANKSQYSMNDIHKELLN
TFIYVYTPEGEVVELPFGSNSIDFAYIIHTDIGDQALYAKINGKISSITK
PLKNEQIVEIFTSKDSKPDVIWLNSVRTKKARSKIRSWLNKNDNTIFVDN
NIIAYLVGANKEQRKLFSLFKAYTKTKIKRIAIDSECNPTTGEDIVGIIH
KDEIIVHNENCQKLKYYKKNQLIEVEWEATPTRKVHHIILLLKELKGIFS
YLENIFTINDVRLISEKIEDCGNGHGITNIIVSSNAKNIAKIISSLKENP
NILQIMQVEEDIKNYDN
>BG0716 xylR-1, xylose operon regulatory protein
MQGENMVSIRGGNRRKILLSLKNMQYSRTDLARKLTLTNAAVTILTNQMI
KENLLIEVGSRVSDIKKHGRKEILLDINKDYAYSMGVIISSNYFQIGIAN
LKCEVLISETHSFEPPVSAYEILEKIKDHMIEIIWKHNFSRDKFIGLGFS
ITGLIKDKESGIVNDSYGAWIEKDVPVKRILEEYFSLTVYLESYVKNLSL
AEFMGKNIDNIMFFDYTDTAELSIWSDGNVYPGFNNKSGMVSHMIIDYEG
EKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYEKYEGRLKKVT
IYDVFSLYEKYDFVNKIMQDTVKYLAIIIINIQRMLDFNYLVLYGQSFKL
KAFFDSLKEEIKKRNKENIILKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID
>BG0856 xylR-2, xylose operon regulatory protein
MKRYLAIDIGGTSTKYSLADSSGVFFDKNEISTGATSDEQLNILVKLIDS
YKKSNDIAGVAICIPGFVDLKGNVIRVNAISGFVNYPLKEKLEFLTGVSI
EIENDANCVALAEKFKGNAIDSNDFIAITLGTGIGAGIFTNGKLLRGNSF
MSGEVGFMITRGISNNIPFNCRWEAISSVLALRKRVAMRLEKPLKEISGE
YVFNLAENGNVHAKNEVDRFFENLSFGIFNLTFILNPEKILIGGGISARP
DLIDRIYEKLENLWSLEMAFINNNDIKNLVTLEPTKFNNESGKIGALYHY
FTCKKQNNDSV


# Borrelia hermsii DAH, DAH

>BH0731 chromosome partitioning protein ParB
MLIDLEQIKIKRRIRQNVGDTTTLKESIKKHGLIYPIIIDKNKNLVAGFR
RYQVLKELGYKEVDVKVIPIEDKKTLLEIELDENNARKSFTKSEAETGEE
QLKNYSEKNIIIRLLNLITFKIKKIFKRKK
>BH0347 fibronectin-binding protein
MSLNYNEINVLLQELPFKNSFLRKIKQPNHKTLVMELYNKEINEKNFNVL
IALEPKKTRIHKTNKKFANIKPSLRFFEFLKSKVQNGKISEAYQIKNERI
ILIKVLKDKITIFIFIKLWPSSPNIIVTDANFKILDAYYRRPNSKEITGE
IFTKVKEIIENNDITDKNEVNLKDGYNNELSYSEFIENYYDDLEIKETQA
QNIELLKKKYEKEKINLEKKISFLEKQIKSIETIGAQREKGELILLNINK
IKKGMDTIILKNHNGEQIKIMLDKALLPQDNALKYFKEYKKNKNALKIIQ
EQLEHAKTQYDALILNTTCIDSQNCITLANERIKKQKIIQKPSIGLNFIS
YGFEIVVGRNAKENDELLRSWAKGNDYWLHTRDYPGAYVFIRNKKDKTPP
LEVLIDAGNLCVFYTKPARQSGEADLYYTNVKHLRRIKGGKKGLVIPNRE
KNLNIKLDPKILNKLKQNLSS
>BH0623 transcription-repair coupling factor
MNIEKELTTILNDNQNLKKIQQLIKENLPFTLVGHGGFFEAFLINKIKEY
SGNNKIILIVNNENIADALKDDLMQITDKIYELNYFSPLVYKGIGSKSTI
FSERIKFLINFYENNPGIYIVLLKSLLSKIPTKENLFKNIYKIQTSKLIN
IKNLESKLIRLGYEKTMRVTLPGEFTIKGEIIDIHSFNKAEPIRISLHND
TIKEIKYFNPLTQLKKGNEISEFDIIPKKEIIWNNESINRLKHYIKENEY
KKLFEQIETKYHARAEEIFYPLIGDTYLSQEINEDTLTINFEIPNLQEEI
KKIYKEYEKLYSQAIESGEKTIAPKEIFINLNDLKLKTNIFFVKTPANTQ
TEELVEFEIESGRRFFSNIALAKEEIQNWLNNGFKVIIAAESSSQKEKLK
YIFKDLPKIKIEVLKISSSLIINKEKIAIILESDIFNRRQKINKVFESSR
TKPIDSFIEVEKNSHVVHINHGIGIFKQIKRIKTSLLEKDYIEIEYADNE
KLFIPIEQTHLIQRYIGNENQNIKLDKISSKTWEKKKANAKKRIDAIADQ
LVSLYSARESTKGFQYPQDNEWQLLFESEFAYDETPDQLTAISEIKQDMM
SLKVMDRLLCGDVGFGKTEVAMRAAFKAVMGTKQVAILSPTTILAEQHFN
TFKKRFKNFPIKIAMMSRFIKKSKEREIIKNLATGEIDIIIGTHKILSKK
IIYKNLGLIIIDEEQRFGVREKEKLKEIKVSVDCLTLSATPIPRSLHMSL
IKLRDISVLKTPPQNRIKIETYVEEFSELLIKHAIEHELSRDGQVFFVHH
NIQELDLIKAMLEKVVPYARIATIHARLTGDQIENIMHDFINKSYQVLLS
TTIIENGIDIENANTIIINNANRFGLAQLYQLRGRVGRSSQKAFAYFLYK
ESSSLNESAIERLRAISEFSELGAGFQIAMKDMEIRGVGNLLGKEQHGEI
ESIGLDYYLTMLNKAIEKRMGKNSKEDEITIEINYNGFIPDSYVNNEQDK
ISIYKKISAIQSEEENNKIRAEIHDRFGSIPEELNTLLILSELKLLAKKL
NITSLKEKNGLLEIEYLDIKSIPVYRIMQIIKDDPTTLKINPKDKKSVFL
NLKNVKESEKINCIYRHLNLLL
>BH0581 ATP-dependent DNA helicase RecG
MFLHEFKYDLQGISGLGKKGLERLNSLHITNIRELIEYFPKKYEDRKNIK
TFPDSLEVRNCELMTVFTVLEHRDFGNNFKRNLKLIAQSENNEIFEILLF
NRGFLEGVFKVGQKFYIYSKFNYNDYTQMWSCSNFDSEVFSCNPERFKKI
IPVYSLSEGLTSKKISSYVKEALVYFLKFGQSDVPEFLINKYSLLPFHEA
LNEIHFPSSFEMLEKAKKTLIYREIFLLQFFSRGKSSVFFLRKERNLPRN
LLDQIILKLPFKLTKDQRVAIDEIINDLESNKPMNRLLQGDVGSGKTIVA
FLSSIPLIEAGYQVALMVPTDLLARQHYNNLANILKDFNVSIAFLTGSLK
KRDRDEVLEKIQSGTYSLVIGTHAIFSQGTKFKRLAYIIIDEQHKFGVEQ
REELKNKGEEVDVLLISATPIPRSLALTLFGDLEISLIRRGPAGRIPVTT
YLAKHGNEEKVYEFLKNELAKGHQVYFVYPLISSSQRFNLKDATSMCLNL
KNIFVEYSVEMIHSKLESHVKEEIMHDFYLKRIDILVATSVIEVGIDCPN
ATCMVVEHAERFGLSTLHQIRGRVGRGSLKSFLFLLYKEPLTESGKFRLK
TIKENIDGFKIAEEDLKLRGPGNLFGLEQTGYLKLKIADFIEDREVVRLI
REELNMFSLNKAYYNKSDIELLDSLLLSYLRSVAKES
>BH0434 probable chromosome partitioning protein ParB
MYYYKEGFDKMNETFKMVDINLLDVDKSQPRKSINLAELEELSISIKENG
ILQPIVVFHDNGRYNLVIGERRFRAAKLAGMNQIPVIEIETTRENKDFMS
LIENIQRENLTPVEEAYAYKNLMDKHSLTQKALSEKIGKNRSYVANLVRI
LELEQEILNSLHKKEISLGHAKVLLSLKDNQDRYGLYLLIIKKKLSVRDA
ENYVKNFYRPINDKSEILRDPFLNSVKEFLISRIQTKISIKGSKEKGKIE
ISYFTSSDLKRIISIFESIK
>BH0355 CarD-like transcriptional regulator
MTFVLDQAVVYPMQGVGKIKNIQNKEFNGEFIDYYEIYFPFNEMTFMVPV
SRADDLGIRALVSREKVEEVFDIMKDFEGQIDQKKIKDGSHDFYKQSDIL
STAKLYKFLYTKSMQKELPFYEKRILNDFELILQHEISLALQISFEEAKQ
KIKEVLSTGKS
>BH0522A transcriptional regulatory protein
MNSNNVISILNEFSLKLEEIFLLINTDSSELYKETPRYFYNDITNYLELT
LEIANKFQGEFEDPQDLNLGKFLIRSMKCDLISYLYLSLELIDNAMRYSE
IKDAGIAFFKAIAFKISSIISYIEIELENVVLSSAIASRQALNKDGHKIL
IFSCDSMYSKKLKDHLILKDYAVLSTNTVDLFNQLLCNDFYDLIIFDLSS
DKDIQLILNLLKNVKNNSFYEMIPVIVISQINRKDIIQTFIEEQVDDYFL
RNLDFLVLDLRISSFLEKKKVIEQGQKYLDLILHNREYFESELIEAGNYI
ETLLPMKMQNEFFSSNWIFVPSKRIGGDFFNYYFVNDDNLIIYLIDISGH
GVGSALLSLSVSSVINSYIMNNNDISPSKVLRYVNSYFVKFKSDMLITLW
YGVLNVKTRHLRFASAGAPPAVVLSAEDNIYLQTRGAILGIEEMYSCEEN
EYSLSKFSHLVLFSDGVYEIENKQDIIMSIDDFYKILKKNSYDLNDFILV
SLYEKMLNLSKYNAFRDDFSILEFILN
>BH0705 ribonuclease III
MGSAIVKLDVDRRRKLDEFLMGLHIDFNDIDLLNMSLSHSSYANEFDQKY
ANNERLEFLGDSVLNLIITDYLYKFYPEKSEGELSKARSYIVSEESLSSI
ARELNLGNYILLGRGEENNDGRNKKGIIADAIEAFVGALYLDGGFLKASA
FVVELFEVHIRLMFNRGDFKDYKSLLQEYVQKKYKISPNYRLAKELGPDH
NKIFCVELYVNDKFISNGKGKSKKEAEMIAAEMALKTIANIDL
>BH0388 DNA-directed RNA polymerase beta' chain
MKEIKDFEKIRIKIASRDQIRSWSYGEVKKSETINYRTLRPEKDGLFCER
IFGTTKEWECYCGKFKSIRYKGIICDRCNVEVTHFKVRRERMGHIELSAP
VAHIWYYKYIPSRIGLLLDITASNLNSILYYEKYIVIEPGDTDLKKMQLL
NEDEYSEAKERYGMSFSASMGAEAIKTLLENLDLDELSSKLRLQMIDKDD
KTDKKLLRRLEIIENFKVSGNKPEWMIMDVLPVIPPEIRPMVQLDGGRFA
TSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGTSNRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHQCGIPAKMALELFKPFVIRKLIESESVFNIKRAKSLIEQEVDEVWQI
LDNVIKEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPAAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLY
YLTMERKNVVGEGRKFANFNHVLLAINNKSLDYNAQIYVKIDGEYIATTA
GRVVFNEALPGKITFVNKTLSDYELQSLISEVYVIYGSSIVIEMLDIIKE
LGFRYATKFGCTISMSDIIVPEEKKIYVDKANREIAKIQNDYTKGVITGE
ERYNNVVSVWSKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQI
RQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTA
LKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVEALKNGEEIVEPLRE
KAVGSYSIERIKSPITGEIILDVNEEVTEDKIKLLETVGIDKLVIRSVLT
CEAEHGVCQKCYGRDFSNNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKIALKNAFILNGLEGFNVQVDDGLLFTRKGTLKVINVIY
EENIKEIKELKVLDSQKVIKGMPLFINKNGIDVLSTHIGYVKIKDDKLMI
VSEEQEISLKAGTRLEINVGDYVEAGRVIGTFDPFAEPIIAEFKGKVKFK
DIILGTTLKEEINLETGNIEKRITDQVFESLDPRILIINDRGVEITSYVL
PGDAYLQVEDGQDINIGDVIAKLSKGSEKTQDITGGLPRVNDLFETRIPK
NLTEMAKVSGIVQFKAIQKGKRLINVLDEYGVEHKHYIPAGKHLLVRDGD
VVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKH
IGVIIKQMMKKVKIVSVGDTNFVYNQKVDKHAFYEQNKRVIEQGGEPAVA
SPILIGITKASLNIDSFISAASFQETTKVLTDASIAGSVDDLKGLKENVV
IGHLIPTGTGMNLYKRVKVRENSSSEV
>BH0693 hypothetical protein
MQGENMVSIRGGNRKKILLSLKNMQYSRTDLARKLALTNAAVTILTNHMI
KENILVEVGSKESGIKKHGRKEILLDINKDFAYSMGVIISSNYFQIGIAN
LKCEVLISEIYSFEPPVSAYEILEKIKDHMIEIIWKHNFSRDKFIGLGFS
ITGIIKDKESGIVNDSHGAWIEKDVPVKAILEEYFSLTVYLESYVKNLSL
AEFMGKNVDNIMFFDYTDTAELSIWSDGNVYSGFNNKSGMVSHMVIDYGG
EKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYDKYEGRLKKVT
IYDIFALHDKYEFIHKIMEDTVKYLAIVIINIQRVLDFNYLVLYGQSFKL
KSFFDLLKEEIKRLNKESIILKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID
>BH0389 DNA-directed RNA polymerase beta chain
MIKRVHLGQGKAEEILDLPNLIEIQLNSYEKFLQLERLKTNRPLLNEGLE
SVFRDVFPMKSSNGEVALEYEKYYIEYNSLSFTEKECKRKGQSYEAVLKI
RLNLQFLTTGEIRQKDVYMGTIPLMTDRGTFIVNGAERVIVSQIHRSPGV
VFYKEKDLYYARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILVTLFLRA
LGLNTRERIIETFYKIRKIEVNEDTKREITGQYLATNIIIKENMTYRAGD
KITLQDIEDFLQNGVKEIDLIDFDGYDSVPGKHFISSDVILNCFEKEDAY
FSLKDGFKELSRESVMLAVYSVLLPGEPISIDNAESDLRNVFFSEKRYDL
GHVGRYKLSKKFGLDDLTTSVLTMTDIVNTISHLLRIYDGHDVLDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPI
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVR
DVHYTHYGRMCPIETPEGPNIGLIVSLATYAKVNDYGFLETPYRKVVDGK
VTDEIEYLSAIDEEKKCIAQANAAVNAEGNYIDDLISVRVSGDYTTMIPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPQPP
IVGTGMERIVAKDSGVVVKAKRSGIVVLATSKKIVIRPEDAADDHDLDEY
ELAKYERTNQDTSFNHSVLVKEGQVVNKGEIIADGPATRYGEVALGNNLL
VGFIPWNGFNYEDAILISERIIKEDLYTSIHIKEFSIEVRETKLGPEKVT
ADIPNVSGKILNKLDENGIVRIGTYVKPGDILIGKVTPKSEGDITPEFKL
LTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKDDVSNLPPGVDEILK
VYIAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPL
GVPSRMNIGQLMESQLGLAGKYLGEYYDVPVFESATNECIQEKLKKAGFN
ETSKAVLYDGYTGEPFENEVMVGIIYMLKLHHLVDDKMHARSTGPYSLVS
QQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIY
ENIVKGIPTNVSGIPESFNVLMQELRGLGFDLSIYDDKGNQIPLTEKEEE
LINKT
>BH0800 N utilization substance protein A
MMSRRLNYREGVLDMIKGTGQMISNIASERGMSIDAIRKTVRESVMIAYK
KYFGTSENALIKFDEDTGDLVVYSKKKIVEEVQNDILEILQDDIQEFEVV
EDGYAYIEIDPKIFDRLSIQVAKQRTKSDLQGIEDNELYLEFKHKLHKIV
IGYVQQNRNGDLYVNLGSTDGVIPKKYQSSREVYGLNDKVRVLVYSVKKG
KNGIEVVLSRTHPKFIEELLTLEIPEIEEGIIKIHKIVRDPGYRTKVAVY
SEKEEIDPVGPCIGQKGVRIQSIIKELEGEKIDIIPYSRDIKEFIRDALT
PAKIDNVYIVDEDLHKALVVVSDEQLSLAIGKMGQNVRLANRLLDWAIDV
KTNSQFAEMKASGEFKQETFEMFDKILQDNVQEDEFEEINRISELKILDS
DIVDKLIEAGLDDIDNFLDASEENLFELGISYEKQEEINKILKEGMVIIA
NDDDGSIEGIKDEEELLCPECGAVINENMTFCPGCKIGLSFEFEEE
>BH0198 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MIQVYEIAYLLKINDIDKLKNIFRKIVNNTYQDEIQKKLIFKALEISEQL
HYGQYRESKEPYIIHPIMVALFLIKFQLDFKTIIAGLLHDVLEDTSVKKE
EIIKEFDQEVLSLIDGVTKIHDLHNKTRAIKEANTISKMFFAMTHDIRII
IIKLADKLHNMATLSHLPKNRRERIARDCLATYVPIAERLGISSLKIYLE
DLSLKYLYPKEYKEIKNFLSATKIEREKKLYKGKLIIEKELKKIGIDVVI
TVRSKHFYSIFRKMKTRNNNIAQIFDTLGIRIICKKQKECYEILEIVHKV
WKPIPGRLKDYIAIPKENKYQSLHTTVRIPEDNQLIEIQIRTEEMDRIAK
YGVAAHWLYKEQVELKADDISFINRIKKWQQESVNKNQYSMYDIHKELLN
TFIYVYTPEGEIVELPFGSNSIDFAYTIHTDIGDQALYAKINGKISSLTK
PLKNEQIVEIFTSPEAKPDVIWLNSVRTKKARSKIRSWLNKNDNTIFVDN
NIIAYLIGENKEQKRLFSLFKSLTKDKLKSITIASDCNPLTDEDIIGIIQ
KDTIVVHKEHCKEIIHQKKSHLVEVEWEATPTRKVYHIIIFLKNLKGLFN
YLDNLFTIFDVRLISEKIEDCGNGHGIINIIISSNAKNVSMILTSLKENP
NVLQIMQVEEDIKNYDN
>BH0527 Bvg accessory factor
MRILMNKFVGAVQLIIDIGNTSISFALYRLDKMQIYCKLGTKRDLSFKEL
YKFLKVKFDYKVDQVFVSSVVPVIDTVLINAIVSLYKVNPLFIRFDLSYD
LSFNLYNNNRFVLGSDVFANLVGAIEYYNINDALVVDLGTACTIFAISRR
EGILGGLINGGPFTDLNALIQNAYLLNDFNLAVPKKLLGLSTIDSVNSGV
IYQYKYLIEGVYHELRHNYDKEFRLIITGGNSYLVLPLISVDFIANLYLT
LEGIRILGNAFKGDY
>BH0132 transcription elongation factor GreA
MSNITIERLDNILQEDKWTRIVVNNYSLAKIKELDELIDSIISENLTEEA
LDICGKHLKDVKKSIAGLYISGMLIYSRRPLNDMSLLTVVDLFSQNLKWS
LVEHICNKMLLTSENKHALYTLAKIYAQNNENDKLPDIWMRIVESDVDDT
VFVRQLATHYENIDLQKSIYFFRKAIYRFIDKKQMSGIREIWSKLIKYVS
DDFDSFLLILQKVEKELGFKKVVVLYEDLYGHYSVSGNIDETIEILKGIL
KLDNKNQKARENLVIFLREKYKDIKNIEEYLEKSDIENLDKNFVDVYSDF
EKYLFFAKGNFVYHQTWFVGIVKDVNEQGIVVDFVSKRGHFISFDMAISA
LSPLEKEDIRVLKAIKPKEELVENLKRDIEWALRIIIKSYKSIDLKGIKR
ELVPSLMTQSAWNAWSVKAKQILKDNPHFVMASGKADCYIYNERASNFNE
KVYDKFKIEKDFYKRYEIFMHYCGTSGGVVKDLHVEEEMLNYFLIYVNNF
TKVDHYVISSYVILKSLKNSESGVAFKINIEKDINLEVLLREYSKNIVDL
FDSILNAEIKKELVSLIKEELVDWVAYYKQLFPYYVNKKLIDSLYKEDIK
ETSQLFNYVIKNYKVYKDAYIWILKHYVSYSLNLDYSDSELLVNLIKILT
DSVVKINNKNNSVANKRIYKMVINLLIKDKYLSIVLNKVMDEELAKRIYM
TCFYIRDFPPKDLLHIKTAIRTVFSAIEFEDEKLQFSGDKVEIGFLTILS
SLSKKQKELQYLKDVEIPENSKEIGKARELGDLKENAEYHSAKERQQFLT
KRLNSLMLEIDVAKVVDTKELQSSVVGFGTKVTMINKDTGREEFYLIFGP
WESNPDEGIISYKSPFGENLLDAKEGDNLDFVINDTRFQYYVKKIEPARI
N
>BH0771 RNA polymerase sigma factor RpoS
MNIFSNEDLNIYLKSVREHRLITHEEEIELAKQIKLGDLKAKNKMINANL
RLVLKIIKRYAGKGLKVEDLIQEGNLGLIRAAEKYDPSKNTKFSTYASFW
IKQSLQRALNTKTRLVKVPYRKENLILQINKYLMEEEKSPKKEDIMERFN
LTTAQYVKIIPYLEKEYSLDKKLEGSENSTLLNLYEDNSFNPESTLEQNS
TLKHLNHILETKLNDKERYIIRKRYNLDNNDKKSTLKDISSELGISSETV
RQIEKRVLKKLREELYQ
>BH0783 hypothetical protein
MRKELFFLVLIILIVCGIVIFFVDSSKREQIYFELNTKSNISFLFLIEDE
SDNLLSMQEIFINIKTGSVGFLDIPVYTGYEDLKGNVSWFEDLYKKNRFV
EFLSKVSRQLNHEPDYYIRFKKNNFVKFIDYLGGVRLLVKNPVKIYSLVR
SILIPSGNSVFDGDKSYDYLSYFRDVASYDERSEFFKEFFKKILTQFSDF
KEEYDYFSKMYFMLETNLSETVFKYILTNYKINNERLIFINIKGQEETFK
DNDDNLIKVIFPYYGGAVLKESIENLNRDLMGETRNEEAIRVVVLNGTKT
AGLAKNVADIFKSFKFKVVRFGNADRHNYSHTLIINNSDNLEIAIKVGDV
IRSRTIKPISEFRVDTLGLDMPDMSPDVIIILGDDFDGRYVKNR
>BH0394 transcription antitermination protein NusG
MSRAWYVLQTFSQYEKKIEQEIKLLISEGIFGANVLDVKAPIERVEEIKN
GKKRIRERKIWPGYILIELDLPEQDWKSTVANIIKIPGVVNFVGTNKEQK
PLPISDEEVKSVFMLAGEIKADKSIFILYDFEEGERVRIKGGPFDSFEGI
IGSIDYEKKKLKVAVQIFGRSTPVEVDFQHIEKI
>BH0502 DNA-directed RNA polymerase alpha chain
MMSLGKLLKDFTIPDRIEFLRGEDDGSYGKFIIYPFEKGFGVTIGNTLRR
VLLSSIEGYAISAMRIQSNQGGSLKIVSSEFDLIPGVVEDTLEVIANIKN
IHLKLDEGVKSATISVSVNGKDTNVLKAVHLEREGVEVCNKDLVIATLSS
EANLDFEFQVDYGRGYVSSEHNAKYLEEVNTIALDSIFSPIEKVTYSVED
TRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLLPLVNFEDKVV
HSVDDSEFRDSDILNMNIEKLNLSVRSLNCLTKENVKTLGELISKSAEEL
SKARNFGKKSLEEIVEKLSVYGLFLGMSKTEALKILNKNDKISH
>BH0107 N utilization substance protein B
MVMNLRHKARVLAFQKIYSIDVNCKAKDNIYDIFGLEDHGVDLEEDLKLF
YSVLVNGTCDNLESIDKLISDISLNWRLDRMDKVDLAILRVSVYSLKFQN
LDVPKRVIIDEAILIAKKYGSKNSYKFVNGILDALLKDMESSFESK
>BH0831 hypothetical protein
MEICMERYVSIDVGGTNTKYSLADSSGNFLDKHEVKSGTTPDEQVGILVD
IINSYKREENIKGVAICMPGFVDPKGIVIRVNAIKGFTNYPLKEKLETLT
GINVEIENDANCVALAEKFKGNAIHYNDFIALTLGTGIGAGIFMNGKLLR
GCSFMSGEIGFMIIRGLSNNIPFNCRWESIASVAALRKRVAQRLEMEFDK
VSGEYVFELADSGNVHARNEIEHFFETLSFGIFNLTFILNPAKILIGGGI
SSRPDLISRIYDKLENLWSLELAHIYNNDIKKLVELETTKFNNDSGKLGA
LYHYFIENNVLCNLGV
>BH0230 transcription termination factor Rho
MPFLKIYLIEEIMDKKYEEFDLEDEMKRLNSSKELKIDDNAKKKIVKVVT
KKESVSSGFKNPDIDRSRESNGASSDFDYDISDPDLESSIKTLEQSNIIN
FLGGKDFIVIDSLYDKPITEIRKVVEGLGTNHTIAVTMKKTELIFLLVKI
LTEHNINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVSPSQIRLFNL
RTGDILYGQIRSPRDGERFFAMIKIKSINDQDPTFAQNRIPFDNLTPLYP
SSKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANA
ITTNYPDIVLMILLIDERPEEVTDMIRGVKGEVIASNFDEQASRHVQVAE
MVIEKAKRLVENKKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNAL
HKPKRFFGSARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELI
LDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRKILSSVDDYE
GVEALVEKMKKSKNNEIFLKTMSNGD
>BH0712 RNA polymerase sigma factor RpoD
MNSVENKDLQAFKKKNSKAIKAILSYLGDKKVITFEDLSTFLSGDMLEPE
NIDYMYGVLENEGISLINEKMESAICSIDEFDEASKLDSQCMILDDSVQS
DDELDDKLDEFEDETLDKEDFSSGYIKSGLLKDSNSEDPIRLYLKEIGKE
FLLTGNQEVELAKQMDSGESIIENILKNEGLVIENYYNLVNAIYSRVDKE
EFFKKEKEREKDNNFDYYNKKKRITSFYKASLKSFQDRLVKYIEKKHRLY
ELGEDIFEESINNERLHIKEMLKSVPLYQEELRIFSDDYIDSASKIKDLK
RQQKSILDRLKIDKVRNLRILGRDLAIPERRERIEQSLNIREDLIKEQIT
EAQLAQKELERIEMYYEYPMDKIISMSEEILKGKQMMQHAKDQLIKANLR
LVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWWI
RQAITRSISDQARTIRVPVHMIEQINRLNRETRYLIQVLGKDPTDEELSA
RLGWDLKKVKTVKNVSREPVSLETPIGEEEDSVLSDFIEDKAIKNPAKHT
SFVVLQDQIRSVLGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTRE
RIRQIESKALRRLKNPKKTQKLKDYLEDLN


# Borrelia recurrentis A1, A1

>BRE_526 Response regulator receiver (CheY) modulated Serine phosphatase
MRMNSNNVINVLNEFGLKIEEIFLLINTYSYALYKETPRYFYDDITNYLE
LTLDIANKFQGEFADSKDLKLGKFMLRSMKCDLMSYLYLSLELIDNSMHY
SGIGDAGIAFFKAISCKILSVVSYIEIEFENMVFSSALKNRKDANKGGNQ
LLIFSCESAYSTKLVNYLILKDYIVISANTVDLFSQLLCDNFYDLIILDL
NSDENIQMILDLLRNIKSNSLYEMVPVIVISQITRKDIIQTFIEEQVDDY
FFKSLDLLVLDIRITSFLKKKKVIEQGQKYLDLVLHGRECVESELIEAGN
YIENLLPKKIRNEFFHSNWIFVPSKRIGGDFFNYYFVNDDNLIIYLIDIS
GHGVDSALLSLNVSSVINSYVMNNNDISPYKVLNYVNTYFVKFRSDMFIT
LWYGVLNVKTKHLRFASAGAPPAVVLSEKGNVYLKTKGAILGIEEMYPCK
ESECYLNKFSHLLLFSDGVYEIENNQDIIMSIDDFYKILKKNTLNLDSFV
LERLYNKMLNLSKYNVFRDDFSILEFIIY
>BRE_529 pantothenate kinase
MMSKIVDSTQLIVDIGNTSISFALYDVGGMQIFCKLKTKLDLSFRELCNF
LKLKFNFKVSKVFVSSVVPVIDKVLIDAIIFLYNVTPLFIGYDLSYDLSF
EFYNGRKFILGSDVFANLIGAIEYYNINDALIADIGTACTIFAVSRKDGI
LGGLINGGPFTSLTALVENAYLLKDFNLVVPQNLLGLSTIDSVNSGVIYQ
YKYLIEGVYHDLIRNYDREFKLIITGGNSNLILPLISVDFIFNLYLTLEG
IRILGNAFKENHLS
>BRE_791 uncharacterized conserved protein
MRRELFFLVLIILIILGIVIFFVDISKREQIYFELNTKSNISFLFLVEDD
NENLLSMQEVFINIKTGNVGFLDIPIYTGYEDFKGNISWFEALYKKNNFT
EFLVKVSKQLNHEPDYYIRFKKDNFVRFVDYLGGVRFLVKNPVKVYNLVH
SILIPSGNSIFDGDKVYDYLSYFRDIASYDERFEFYKEFFKKILAQFANF
QEEYDYFSKMYVMLDTNLSETVFKYILSNYKINDEKLIFLNIKGQEETFK
DDDDNLIKVIFPYYGGAILKESIENLNRILIDGTKTEDVIKIIILNGTQT
AGLARNVADIFKSLKFKVIRFGNADKHNYSHTLIINNSDNLEIAIKAGDV
IRARNIKPISEFHMDILGLDISDMGPDVVIILGDDFDGRYVKSR
>BRE_357 transcription factor, putative
MSFVLDQAVVYPMQGVGKIKNIQNKEFNGEFIDYYEIYFPFNEMTFMVPV
ARAADLGIRALVSKEKVEEVFDIIKDFEGQIDQKKIKDGSHDFYKQSDIL
STAKLYKFLYVKSMQKELPFYEKRILNDFELILQHEISLALQISFEEAKE
KIREVLSGGQAVLD
>BRE_350 fibronectin/fibrinogen-binding protein, putative
MSLNYHEINILLEELPLINSFLKKIKQPNYKNLVIEFYNKSTDEKIFNVL
ISLDPQKTRIHKTNKKFENIKPPLRFFEFLKSKVTNAKVCEAHQIKNERI
ILIKINKNQNYYCIFIKLWTSSPNIIVTDTNFKILDAYYRRPKSKEITGE
IFTKAKKIIENNDMTEKKEVKLKNEYDNKLPYSTFIENYYDNLKIKETKT
HNTEMFNKTYEQEKINLERKIYSLNKQLISMDIIATHKEKGEMILSNINK
IKKGMSEITLQNNNEEEIKITLEKKLSPQDNALKYFKTYKKNKIFLKIVQ
EQLKNAKTQYNTLISNTTYTKEKNHITLTNEKTTKQKTIQKTSIGLHFIS
HGFEIIVGRNAKENDELLRSWAKGNDYWLHTRDYPGAYVFIRNKKDKTPP
LEVLIDAGNLCVFYTKPAKQAGKADLYYTNVKYLKKIKGEKKGLVIPHRE
KNLNIKLDLKILNKLKNKN
>BRE_737 uncharacterized conserved protein
MLIDLEQIKIKKRIRKNIGDTTTLKESIKKHGLIYPIIIDKNKNLVAGFR
RYQVLKELGYKEVDVKVIPIEDKKRLLEIELDENNVRKSFTKSEAEEGEE
ELKNYSEKNKIIRFIKKIIIKIKKIIIIKIKKQN
>BRE_135 greA, transcription elongation factor EF
MSNITIERLDNILQEDKWTRIVVNNYSLAKIKELDELIDNIISENLTEEA
LDICGKHLKDIKKSIAGLYISGMLIYSRRPLNDMSLLTVVDLFSQNLKWS
LVEHICHKMLLTSENKHALYTLAKIYAQNNENDKLPSIWMRIVEADVDNT
VFVRQLATHYENVDLQKSIYFFRKAIYRFIDKKQMSGIREIWSKLIRYVS
DDFDSFLLILQKVEKELGFKKVVVLYEDLYEHYAVSGNIDETIEILKGIL
KLDNKNQKARENLVIFLREKYKDVNNIEEYLEKSDIENLDKNFVDVYSDF
EKYLFFAKGNFVYHQTWFVGIVKDVNDQGILVDFVSKRGHFISFDMAISA
LSPLEREDIRVLKAIKPKEELVEHLKRDIEWALKVIIKSYKSIDLKGIKR
ELVPSLMTQSAWNLWSVKAKQILKDNPHFVMASGKADCYIYNERASNFNE
KIYDKFKVEKDFYKRYEIFMHYYTSGGIVKDSHIEEEMLNYFLIYVNNFA
KVDHYVISSYVILKSLKDFDDKIALKINIERDINLEVLLKEYSKSIVDLF
DAILNADIKKELISLIKEELVDWVVYYKQLFPCYVNKKLIDSLYKEDIKE
TEHLFNYVTKNYKMYKDAYIWILKHYTSYSLNLDYSDAELLVNLIKILTD
SVIKINNKNNSVANKRIYKMVSNLLIKDKYLSIVLSNVMDEELAKRIYMT
CFYIRDFPPKDLIHIKTAIRTVFGNIEFEDEKMQVSGDKVEIGFLTILSS
LSKKQKELQYLKDVEIPENSKEIGKARELGDLKENAEYHSAKERQQFLTK
RLNTLMSEIDVAKVIDIKELQSSVVGFGTKVTMINKDTEREESYLIFGPW
ESNPDEGIISYKSPFGENLLDSREGDSLDFVINNTHFQYYVKKIEPAKIN
>BRE_630 mfd, transcription-repair coupling factor
MNIEKELTTKLKNNQNLQKMQKFIEQNIHFTLTGYEKFFKAFLIHKIKKY
SNNKVILIVKNENISDEIKNDLTQITDQIYELNYFSPLIYKGIGSKSKVF
CDRVKFLINFYENNPGIYIVSLKSLLSKIPTKKDLFNNIYKIQTDKIINI
ENFEKKLIKMGYEKTMRVTLPGEFTINNKIIDIHSFNHKEPTRISLNNDK
IKQINYFNPLNQLKQKNAIYEFNIIPKKEIIWNKENIDKLKNYIKESEYK
QFFKQIETKYNARTEEVFYPLLGETLLSQEINENTITINFEIPNLKEEIK
QIYKEYDRLYTQAIESDLKIVSPKEIFINPNDLKLKTNIYFIKTPINQQT
EKPTKEIIEFKIESERRFFSNIILAKQEIQNWIDNGFQVIITAESNSQKE
KLKYIFQDIPKIKVEVIKISSSLIINEEKIAIITEADIFNKKQKTNKTFE
SSKTKPIDSFIEIEKNSHIVHINHGIGIFRQIKRIKTSLIEKDYIEIEYA
DNEKLFIPIEQTHLIQKYIGNETQNIKLDRISSKTWEKKKVYATKKIDKI
ADQLVSLYAERENITGFQYPQDDEWQLLFESEFPYDETPDQLTAISEIKQ
DMMSSKVMDRLLCGDVGFGKTEVAMRAAFKAVMGKKQVAILSPTTILTEQ
HFNTFKKRFKNFPIQIAMISRFITKSKEKEILRNLETGNIDIIIGTHKIL
SKKITYKDLGLIIIDEEQRFGVKEKEKLKEIKVSVDSLVLSATPIPRSLH
MSLIKLRDISVLKTPPQNRIKIETYVEEFSEILIKHAIENELSRDGQVFF
VHHNIQELDSIKAMIEKVVPYARIATIHAKLTGEQIENIMQDFINKSYQV
LLATTIIENGIDIENANTIIINNANRFGLAQLYQLRGRVGRSSKKAFAYF
LYKENSNLNEGAIERLRAISEFSELGAGFQIAMKDMEIRGVGNLLGREQH
GEIESIGLDYYLTMLNKAIEKRMGKNSKKNEINIEINYNGFIPNSYINNE
QHKISIYKKISAIQSEEENNKIRSEIYDRFGPIPNELNSLLILSELKLLA
QKLNITSLKERNGLLEIEYLDINSIPAEKIMKIIKDNPNILKLNQEYQNS
VFLNLGNIKETDKINWIYKNLYLLL
>BRE_452 ntrA, RNA polymerase sigma-54 factor
MLKQNLKLTHKLQLTQINTIKMLSLDKQELIQIISDELDNNEYIKVDSNK
IFFESLKTYKFKKIFYKENENNKTQYEIALAKTSPKISLKEHLLLQLRIQ
RLNEEEINIGEIIINNLNRKGLYIINPYDFFNKEEWPQVTKMIKLIQQFD
PIGICVPNIIESLILQAKYHNLDTNIIKILQKADLLTNTKEKLKKELNIS
TQDLNDAINTMKLKLNPNPTFEFKDKDDTNDYIEPDIIVINKGNKLKIKI
KEVSIFKTEINKQEVKDLCKYKQAKWLIEALRYRDETLAKIGIAIYTLQK
EFLKRGFKRLRPMNLDDISTRINLSKSTISRAIKNKYLKFDWGTIAIRKL
FNSIGGTKTNEFSKLSIKIIIKGILEQNKNMVDSQISDILKSKGITISRR
TVNKYRNELKCEGEIYGT
>BRE_811 nusA, N-utilization substance protein A
MLRRLNCLKGVLDMIKGTGQMIANIASERGMSIDAIRKTVRESVIIAYKK
YFGTSDNALIKFDDNTGDLIVYSKKRIVDEVKNNVMEILVDDAKTFEVVD
NEYVYVEINPKIFDRLSIQVAKQRTKSDLQGIEDNELYLEFKHKLHKIVI
GYVQQNRNGDLYVNLGSTDGVIPKKYQSPREVYSLNDKVRVLVYSVKKGR
NGIEVILSRTHPKFIAELLALEIPEIEEGIIKIHKIVRDPGYRTKVAVYS
EKEEVDSVGPCIGQKGVRIQSIIKELEGEKIDIIPYSKDIKEFIKDSLTP
AKIDNVYIIDEDLHKALVVVSDDQLSLAIGKMGQNVRLANRLLDWAIDVK
TNSQFAEMKASGEFKQDTFEMFDKIIQDNVQEDEFEEINKISELKVLDDD
IVAKLIQRDLDDIDNFLNASEDKLFELGITYEKQEEINKILKEGMVIISN
DDESVEDVKDEEDLLCPECGAVINENMTFCPGCKIGLSFEFEEE
>BRE_109 nusB, N-utilization substance protein B
MVMDLRHKARILAFQKIYSIDVNCKAKDNIFDIFSFEENGIDLDGDLKLF
YSVLVNGTYDNLESIDKLISGISLNWRLDRMDKVDLAILRMSVYSLKFQD
LDVPKRVIIDEAILIAKKYGNKNSDKFVNGILDALLKDMESSFENK
>BRE_392 nusG, transcription antitermination factor
MSRAWYVLQTFSQYEKKIEQEIKLLISEGVFGNNVLDVKAPIERVEEIRN
GKKRIRERKIWPGYILIELDLSDQEWKSTVANIIKISGVVNFVGTTKEQK
PLPISDEEVKSVFMLAGEIKADKSIFILYDFEEGERVRIKGGPFDSFEGV
IGSIDYEKKKLKVAVQIFGRSTPVEVDFQHIEKI
>BRE_587 recG, DNA recombinase
MFLHEFQYGLQGINGLGSRGIDRLNNIRITNVKELIEYYPKKYEDRKNMA
AFPDPLQVRICELMTIFTVIEHRDFGNTFKRNLKIIGRSENSELFEILLF
NRSFLERIFKIGQKFYIYARFSYNDYTKMWSCSNFDSEIFSYNPVKFKKI
MPVYSLSEGLSSKKISSYVKGALAYFVKFGQSDIPKFLINKYSLLSLHEA
LNEIHFPSSLEMLRRAKKTLVYREIFLLQFFSRGKSYRVFLRAEKNLSND
LLKQIISKLSFELTRDQKIAITEIINDLKNNKPMNRLLQGDVGSGKTLVA
FLSSIPLIEAGYQVAFMVPTDLLARQHYNSLTNILKDFDISVVLLTGSLK
KKDRDEVLEKIQSGICSLVIGTHAIFSQGTKFKNLAYVIIDEQHKFGVEQ
REELRNKGEEVDVLLMSATPIPRSLALTLFGDLEVSLIKRGPEGRLPVTT
YLAKHGNEEKVYEFLKNELGKGHQVYFVYPLISSSEKFNLKDATSMCLNL
QNIFVEYSVAMIHSKLESYVKEEIMHNFYLKKIDILVATSVIEVGIDCPN
ATCMVVEHAERFGLSTLHQIRGRVGRSNLKSFFFLLYKEPLTEAGKFRLK
TIKENTDGFKIAEEDLKLRGPGNLFGLEQSGYFNLRISDFVEHKEIIGLM
RAELDIFCSNRDFYDKSDVKLLDSLLVSYLSSVSKGS
>BRE_229 rho, transcription termination factor
MDRKCEEFDLEDEMKRLNSSKELKIEDNNKKKVVKVVTKKESVSSASRNS
NIDKLRESNELSSDFDYDISDPDLESSIKTLEQSNIINFLGGKDSIVIDT
LYDKPITEIRKVVEGLGTNHTIAVTMKKTELIFLLVKILTEHNINVLFTG
VLDVLSDGYGFLRTASNSYLSGGNDVYVSPSQIRLFNLRTGDILYGQIRS
PREGERFFAMIKIKSINDQDPTFAQNRIPFDNLTPLYPSSKLDLEYENCN
ISTRLINLFAPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYPDIVLMI
LLIDERPEEVTDMIRGVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVEN
KKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARN
IEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLFP
AINIKKSGTRKEELLLSEEERSKILLIRKILSGVDDYEGVEALVEKMKKS
KNNEIFLKTMSNGD
>BRE_710 rnc, ribonuclease III
MGSSVVKLDVDRKQKLNEFLMGLHIDFNDIYLLNMSLSHSSYANEFDQKY
ANNERLEFLGDSVLNLIITDYLYKFYPDKSEGELSKARSYIVSEDSLSSI
ARELNLGNYILLGRGEENNDGRNKKGILADAIEAFVGALYLDGGFSKAST
FVVELFEVHIRLMFNRGDFKDYKSLLQEYVQKKYKISPSYKLAKELGPDH
NKIFCVELYVNDKFVSNGKGKSKKEAEMIAAEMALKNIVNIDL
>BRE_508 rpoA, DNA-directed RNA polymerase
MSLGKLLKDFTIPDRIEFVRGEDDGSYGKFVIYPFEKGFGVTIGNTLRRV
LLSSIEGYAISAMRIQSNQEESLKIVSSEFDLIPGVMEDTLEVIANIKNV
HLKLDEGVTNTTINLSVNGKDNNVLKAGHLEREGVEVFNKDLVIATLSSD
ANLDFEFQVNYGRGYVSSEQNAKYLEEVNTIALDSIFSPIEKVTYSVEDT
RVGQRSDYDKLVMEIWTTGVISAKDAIKKAASVVREFLLPLVNFEDKVIH
SVDYAEFRDSDILSMNVEKLNLSVRSLNCLIKENVKTLGELISKSPVELS
KARNFGKKSLEEIVEKLNAYGLFLGMSKVEALKVLSKHDKISH
>BRE_387 rpoB, DNA-directed RNA polymerase beta chain
MIKRVHLGQGKAEEILNLPNLIEIQLNSYEKFLQLERLKNNKPLLNEGLE
SVFRDVFPMKSSNGEVALEYEKYYIEYDSISFTEKECKRKGQSYEAVLKI
RLNLQFLTTGEIRQKDVYMGTIPLMTDRGTFIVNGAERVIVSQIHRSPGV
VFYKEKDLYYARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILVTLFLRA
LGLDTREKIIETFYKIRKIEVNDDTKREITGQYLATNITIKENMTYRAGD
KITLQDIEDFLQNGVKEINLIDFDGYDSVPGKHFISSDVILNCFEKEDAY
FALKDGFKELSRESVMLAVYSVLLPGEPISIDNAENDLRTIFFSEKRYDL
GHVGRYKLSKKFGLDDLTTSVLTMTDIVNTISHLLRIYDGHDVLDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPV
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVR
DVHYTHYGRMCPIETPEGPNIGLIVSLATYSKVNDYGFLETPYRKVIDGK
VTDDIEYLSAIDEEKKCIAQANASVSSDGNYTDDLVSVRISGDYTTMMPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPQPP
IVGTGMERIVAKDSGVVIKAKRPGRVVLATNKKIVIKPDNATSERDLDEY
ELYKYERTNQDTSFNHSVLVKNGQIVNKDEIIADGPATRYGELALGNNLL
VGFIPWNGFNYEDAILISERIVKEDLYTSIHIKEFSIEVRETKLGPEKVT
ADIPNVSGKILSKLDENGIVRIGTYVKPGDILIGKVTPKSEGDITPEFKL
LTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKDDVGNLPPGVDEILK
VYIAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPL
GVPSRMNIGQLMESQLGLAGKYLGEYYDVPVFESATNECIQEKLKKAGFN
ETSKAVLYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHARSTGPYSLVS
QQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIY
ENIVKGIPTNVSGIPESFNVLMQELRGLGFDLSIYDDNGNQIPLTEKEEE
LINKT
>BRE_386 rpoC, DNA-directed RNA polymerase beta' chain
MKEIKDFEKIRIKIASPDQIRSWSYGEVKKSETINYRTLRPEKDGLFCER
IFGTTKEWECYCGKFKSIRYKGIICDRCNVEVTHFKVRRERMGHIELSAP
VAHIWYYKYIPSRIGLLLDITASNLNSILYYEKYIVIEPGDTDLKKMQLL
NEDEYSEAKERYGMSFSASMGAEAIKTLLENLDLDELSSKLRLQMIDKDD
KTDKKLLRRLEIIENFKISGNKPEWMIMDVLPVIPPEIRPMVQLDGGRFA
TSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGTSNRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHQCGIPAKMALELFKPFVIRKLIESEAVFNIKRAKSLIEQEVDEVWQI
LDNVIKEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPAAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLY
YLTMERKNVMGEGRKFSNFNHVLLAINNKSLDYNAQIYVKVGEEYIKTTA
GRVVFSEALPGKISFVNKTLSDYELQTLISEVYVIYGSSIVIEMLDIIKE
LGFRYATKFGCTISMSDIIVPQEKKVYVEKANREIAKIQNDYTKGVITGE
ERYNNVVSVWSKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQI
RQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTA
LKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVEALKNGEEIIEPLRE
KAVGSYSIERIKSPITGEIILDVNEEITEDKIKLLETVGIDKLVIRSVLT
CEAEHGVCQKCYGRDFSNNKPVSIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKIALKNAFILNGLEGFNVQVDGGLLFTRKGVLRIINVIY
EESIKKIKKLKVSDSQKVIKGMSLFIDKSGVEVLSSHIGYIKIKDNKLMI
VSEEQEISLKVGTRLEINVGDYVEAGRVIGTFDPFAEPIIAEVKGKIKFK
DIILGTTLKEEINLETGNIEKRITDQVFESLDPRILIINDRGVEIASYVL
PGDAYLQVEDGQDIDIGDIIAKLSKGSEKTQDITGGLPRVNDLFETRIPK
NLTEMAKVSGVVQFKAIQKGKRLINVIDEYGVEHKHYIPAGKHLLVRDGD
VVRAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKH
IGVIIKQMMKKVKIVSVGDTNFVYNQKVDKHAFYEQNKRVIEQGGEPAVA
SPILIGITKASLNIDSFISAASFQETTKVLTDASIAGSIDDLRGLKENVV
IGHLIPTGTGMNLYKRVKVRENSNSEV
>BRE_718 rpoD, RNA polymerase sigma-70 factor
MNSVDNKDLQAFKKKNSKLIKTILNYLGDKKEITFEDLSTFLSGDMLEPD
NIDCIYGILENEGIGLINEKIGSDICDVDELDEASKLDSQCMMLDDAIQV
DDELDDKLDDFDDEVLDKEDYNSGYIKSGLLKDSNSEDPIRLYLKEIGKE
FLLTGNQEVELAKQMDSGESIIENILKNEGLVIENYYNLVNAIYSRVDKE
EFFKKDREREKDNNFDYYNKKKRITSFYKSLLKPFQDRLVKYVERKHRLY
ELGEDIFEESITNERLQIKELLKSIPLYQEELRLFSDDYIDSASKIKDLK
RQQKSILDRLKIDKVRNLRILGRDLAIPEKRERIEKSLNIREDLIKEQIT
EAQLAQKELERIEMYYEYPMDKIISMSEEILKGKQMMQHAKDQLIKANLR
LVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWWI
RQAITRSISDQARTIRVPVHMIEQINRLNRETRYLVQILGKDPTDEELSI
RLGWDLKKVKTVKNVSREPVSLETPIGEEEDSVLSDFIEDKAIKNPAKHT
SFVILQDQIRAVLGTLPEREQEVVKMRFGLEDGYSLTLEEVGLYFNVTRE
RIRQIESKALRRLKNPKKTQKLKDYLEDLN
>BRE_778 rpoS, RNA polymerase sigma factor
MNIFSNEDLNIYLKSVREHRLITHEEEIELAKQIKLGSLKAKNQMINANL
RLVLKIIKRYAGKGLKIEDLIQEGNLGLIRAAEKYDPSKNTKFSTYASFW
IKQSLQRALNTKTRLVKVPYRKENLILQINKYLMEEEKSPKKEDIMERFN
LTTAQYVKIIPYLEKEYSLDKKIEGSENSTLLNLYEDNSLNPESTLEQNS
TLKHLNYILETKLNEKERYIIKKRYNLDNSDKKSTLKDISTELGISSETV
RQIEKRVLKKLREELYQ
>BRE_434 spo0J, stage 0 sporulation protein J
MDESLKMVDINLLDIDKSQPRKSINLAELEELSISIKENGILQPIIVYPN
NGRYNIIIGERRFRAAKLSGMSQIPVIEIEASTKDKDFMSLIENIQRENL
TPVEEAYAYKNLMDKHALTQKALSEKIGKNRSHVANLVRILELEQEILNS
LHKKEISLGHAKVLLSLKDNQDRYALYLLIIKKKLSVRDAENYVKNLYKT
INDKSEISRDPFLNSIKEFLISRIQTKISIKGSKEKGKIEISYFTSSDLK
RIISIFENIK
>BRE_195 spoT, guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
MIQVYEIAYLLKINDIDKLKNIFKKTVDNTYQDDIQKKLIFKSLEISEQL
HYGQYRESKEPYVIHPIMVALFLIKFQLDFKTIIAGLLHDVLEDTSVQKE
EIIKEFDQEVFSLIDGVTKIHDLHNKTRAIKEANTISKMFFAMTHDIRII
IIKLADKLHNMATLSHLPKNRRERIARDCLATYVPIAERLGISSLKIYLE
DLSLKYLYPKEYKEIKNFLSATKIEREKKLYKGKLIIEKELKKIGIDVTI
TVRSKHFYSIFRKMKTRNNNISQIFDTLGIRIICKKQKECYEILEIVHKV
WKPIPGRLKDYIAIPKENKYQSLHTTVRIPEDNQLIEIQIRTEEMDKIAK
YGVAAHWLYKEKVELKADDISFINRIKKWQQESANKNQYSMHDIHKELLN
TFIYVYTPEGEIVELPFGSNSIDFAYTIHTDIGDQALYAKINGKISSLTK
PLKNEQIVEIFTSEEAKPDVIWLNSVRTKKARSKIRSWLNKNDNTIFVDN
NIIAYLIGENKEQKRLFSLFKSLTKSKLKSITTASDCNPLTGEDIIGLIQ
KDTIVVHKENCKEITYQKKNHLVEVEWEATPTRKVYHIIIFLKNLKDLFN
YLDNLFTTFDVRLISEKIEDCGNEHGIINIIILSNHKNVSMIFNSLKENP
NVLQIMQVEEDIKNYDN
>BRE_699 xylR-1, xylose operon regulatory protein
MQGENMVSIRGGNRKKILLSLKNMQYSRTDLARRLSLTNAAVTILTNHMI
KENILVEVGSKESDIKKHGRKEILLDINKDFAYSMGVIISSNYFQIGIAN
LKCEVLISETYSFEPLVSAYEILERIKDHMIEIIWKHNFSRDKFIGLGFS
ITGIIKDKESGIVNDSHGAWIEKDVPVKAILEEYFSLTVYLESYVKNLSL
AEFMGKNVDNIMFFDYTDTAELSIWSDGNVYSGFNNKSGMVSHMVIDYGG
EKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYDKYESRLKKVT
IYDIFALHDKYDFIHKIMEDTVKYLAIVIINIQRVLDFNYLVLYGQSFKL
KSFFDLLKEEIKRLNKESIILKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID


# Borrelia turicatae 91E135, 91E135

>BT0107 N utilization substance protein B
MVMDLRHKARVLAFQKIYSIDINCKAKDNIYDIFNLEDHGLELEENLKLF
YSVLVNGTYDNLEFIDKLISDISLNWRLDRMDKVDLAILRMSVYSLKFQN
LDVPKRVIIDEAILIAKKYGSKNSYKFVNGILDALLKNMESSFESK
>BT0731 chromosome partitioning protein ParB
MLIDLEQIKIKKRIRQNIGDTSTLKESIKKHGLIYPIIIDKNKNLVAGFR
RYQVLKELGYKEVDVKVIPTEDKKILLEIELDENNARKSFTKSESESGEE
QLKYYSEKNIIIRFLKFIILKIKKILKRKKQNKT
>BT0198 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MIQVYEIAYLLKINDIDKLKNIFRKTVNNIYQDDIQKKLIFKALEISEQL
HYGQYRESKEPYVIHPIMVSLFLIKFQLDFKTIIAGLLHDVLEDTSVKKE
EIIKEFDQEILSLIDGVTKIHDLHNKTRAIKEANTISKMFFAMTHDIRII
IIKLADKLHNMATLSHLPKNRRERIARDCLATYVPIAERLGISSLKIYLE
DLSLKYLYPKEYKEIKNFLSATKIEREKKLYKGKLIIEKELKKIGIDVTI
TVRSKHFYSIFRKMKTRNNNISQIFDTLGIRIICKQQKECYEILEIVHKV
WKPIPGRLKDYIAIPKENKYQSLHTTVRIPEDNQLIEIQIRTEEMDKIAK
YGVAAHWLYKEQVELKADDISFINRIKKWQQESVNKNQYSMHDIHKELLN
TFIYVYTPEGEIVELPFGSNSIDFAYTIHTDIGDQALYAKINGKISSLTK
PLKNEQIVEIFTSPEAKPDVIWLNSVRTKKARSKIRSWLNKNDNTIFVDN
NIIAYLIGENKEQKRLFSLFKSLTKSKIKSITIAPDCNPLTGEDIIGIIQ
KDTIVVHKEHCREIAHQKKSHLVEVEWEATPTRKVYHIIIFLKNLKGLFN
YLDNLFTTFDVRLISEKIEDCGNGHGIINIIISSNAKNVSMIFTSLKENP
NVLQIMQVEEDIKNYDN
>BT0623 transcription-repair coupling factor
MNIEKELTARLNDNQNLKKIQQLIEKNLPFTIVGHEGFFKAFLINKIKEY
SSSNKIILIVKNESISDELKDDLMQITDNIYELNYFSPLIYKDIGSKSKV
FIKRVKFLINFYENNPGIYIVSLKSLLSKIPTKENLFKNIYKIQTDTIIN
IENLESKLIKLGYEKTMRVTLPGEFTIKSEIIDIHSFNKTEPIRISVKVD
KIKEIKYFNPLTQLKKGTPISEFAIIPKKEIIWNNENINKLKHHLKENEY
KKLFEQIETKYNARAEEIFYPLIGDTYLSQEINEDIPIINLEIPNLQEEI
KKIYKEYEKLYSQAIESGKKTIAPKEIFINLSDLKLKTNIFIVQTPANIK
TKELIEFNIESERKFFSNITLAKEEIQNWLNNGFKVIIAAESNSQKEKLK
YIFKDLTKIKIEILKISSSLIINKEKIAIILESDIFNRRQKTNKAFESSK
TKTIDSFIEVEKNSHVVHINHGIGIFRQIKRIKTSLLEKDYIEIEYADNE
KLFIPIEQTHLIQRYIGNETQNIKLDKISSKTWEKKKAYAKKRIDAIADK
LVELYVQRESSKGFQYPQDNEWQLLFESEFPYDETPDQLTAISEIKQDMM
SLKVMDRLLCGDVGFGKTEVAMRAAFKAVMGKKQVAILSPTTILTEQHFN
TFKQRFKNFPINIAMMSRFIKKSKERDIIKKLETGEIDIIIGTHKILSKK
IIYKNLGLIIIDEEQRFGVKEKEKLKEIKISVDCLALSATPIPRSLHMSL
IKLRDISVLKTPPQNRIKIETYVEEFSELLIKHAIENELSRDGQVFFVHH
NIQELDLIKAMLEKMVPYARIATIHARLQGDQIENIMHDFINKSYQVLLA
TTIIENGIDIENANTIIINNANRFGLAQLYQLRGRVGRSSQKAFAYFLYK
ENSSLNESAIERLRAISEFSELGTGFQIAMKDMEIRGVGNLLGREQHGEI
ESIGLDYYLTMLNKAIEKRMGKNSKEDEITIEINYNGFIPDSYINNEQDK
ISIYKKISKVQNKEENNKIRTEIYDQFGPIPKELNNLLILSELKLLAKKL
NITSLKEKNELLEIEYLNTKSIPAEKIMQIIKDNPTILKINPEYKNSVFL
NLKHIKKSEKINCIYKNLNLLL
>BT0389 DNA-directed RNA polymerase beta chain
MIKRVHLGQGKAEEILDLPNLIEIQLNSYEKFLQLDRLKNNKPLLNEGLE
SVFRDVFPMKSSNGEVALEYEKYYVEYDSLSFTEKECKRKGQSYEAVLKI
RLNLQFLTTGEIRQKDVYMGTIPLMTDRGTFIVNGAERVIVSQIHRSPGV
VFYKEKDLYYARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILVTLFLRA
LGLDTREKIIETFYKIKKIEVNEDTKREITGQYLAVNITIKENMTYRAGD
KITLQDIEDFLQNGVKEIDLIDFDGYDSVPGKHFISSDVILNCFEKEDAY
FSLKDGFKELSRESVMLAVYSVLLPGEPISIDNAENDLRTVFFSEKRYDL
GHVGRYKLSKKFGLNDLTTSVLTMTDIVNTISHLLRIYDGHDVLDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPI
VSAVKEFFATSQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDRAGFEVR
DVHYTHYGRMCPIETPEGPNIGLIVSLATYAKVNDYGFLETPYRKVINGK
VTDEIEYLSAIDEEKKCIAQANAAVNAESNYIDDLISVRVSGDYTTMIPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPQPP
IVGTGMERIVAKDSGVVIKAKRSGTVVLATSKRIVIRPDNADDEHDLDEY
ELAKYERTNQDTSFNHSVLIKEGQVVNKGEIIADGPATRYGELALGNNLL
VGFIPWNGFNYEDAILISERIVKEDLYTSIHIKEFSIEVRETKLGPEKVT
ADIPNVSGKILNKLDENGIVRIGTYVKPGDILIGKVTPKSEGDITPEFKL
LTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKNDVGNLPPGVDEILK
VYVAKKRRLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPL
GVPSRMNIGQLMESQLGLAGKYLSEYYDVPVFESATNECIQEKLKKAGFN
ETSKAILYDGYTGEPFENEVMVGIIYMLKLHHLVDDKMHARSTGPYSLVS
QQPLGGKAQFGGQRLGEMEVWALEAYGAAYTLQELLTVKSDDMSGRVKIY
ENIVKGIPTNVSGIPESFNVLMQELRGLGFDLSIYDDNGNQIPLTEKEEE
LINKT
>BT0705 ribonuclease III
MGSAVVMKLDTDRRKKLNEFLLGLHIDFNDIDLLNMSLSHSSYANEFDQK
YANNERLEFLGDSVLNLIITDYLYRFYPEKSEGELSKARSYIVSEESLSS
IARELNLGNYILLGRGEENNDGRNKKGILADAIEAFVGALYLDGGFLKTL
DFVIELFEVHIRLMFNRGDFKDYKSLLQEYVQKKYKISPTYKLAKELGPD
HNKVFCVELYVNDKFISNGKGKSKKEAEMIAAEMALKNIANIDL
>BT0581 ATP-dependent DNA helicase RecG
MFMFLHEFQYDLQGISGLGNKGIDRLHNLNITNIKELIEYFPKKYEDRQN
IKTFPDPLEVRSCELMTVFVVLEHRNFGSNSKKNLKIIAQSENDEIFEIL
LFNRGFLEGVFKVGQKFYIYSKFNYSDYTQMWSCSNFDSEVFSYNPERFK
KIMPVYSLGEGLTSKKISSYVKEALIYFLKFGKSDIPDFLINKYSLLSLH
DALNEIHFPTSLEMLDRAKKTLIYREIFLLQFFSRGKSSLVFLRKEKHLP
MNLLDQVVLKLPFRLTKDQEVVISEIIDDLKSNKPMNRLLQGDVGSGKTL
VAFLSSIPLIEAGYQVALMVPTDLLARQHYNNLSNMLKDFNISIALLTGS
LKTKNRNDVLEKIQSGTYSLVIGTHAIFSQRTKFKKLAYVIIDEQHKFGV
EQREKLKNKGEEVDMLLMSATPIPRSLALTLFGDLEVSLIKRGPAGRRPV
TTYLAKHGNEDKVYEFLNNELGKGHQVYFVYPLISSSEKFNLKDVTSMCL
NLKNIFVEYSVAMIHSKLESHVKEEIMRDFYLKKIDILVSTSVIEVGIDC
LNATCIVVEHAERFGLSALHQIRGRVGRGSLKSFLFLLYKEPLTEAGKFR
LKTIKENIDGFKIAEEDLKLRGPGNLFGLEQTGYLKLKIADFVEDKEVIS
LIREELTMFFLNKAFYDKADIELLDSLLVSYLRFVGKEN
>BT0394 transcription antitermination protein NusG
MSRAWYVLQTFSQYERKVEQEIKLLISEGVFGSNVLDVKAPIERVEEIKN
GKKRIRERRIWPGYILIELDLPEQEWKSTVANIIKIPGVVNFVGTNKEQK
PFPISDEEVKSVFMLAGEIKADKSIFILYDFEEGERVRIKGGPFDSFEGV
IGSIDYEKKKLKVAVQIFGRSTPVEVDFQHIEKV
>BT0434 probable chromosome partitioning protein ParB
MYYYKEVFDKMSETFKMVDINLVDVDKSQPRKSINLAELEELSISIRENG
ILQPIVVFHDNGRYHLVIGERRFRAAKLAGMRQISIIEIETTRKNKDFMS
LIENIQRENLTPVEEAYAYKNLMDKHSLTQRALSEKIGKNRSHVANLVRI
LDLEQEILNSLHKKEISLGHAKVLLSLKDSQDRYGLYLLIIKKKLSVRET
ENYVKNFYKPINDKSEISRDPFLNSVKEFLISRIQTKISIKGSKEKGKIE
ISYFTSSDLKRIISIFESIK
>BT0831 glucokinase
MEICMERYVSIDVGGTNTKYSLVDSGGNFLDKHEVKSGTTPDEQVGILVN
VINSYKREENIKGVAICMPGFVDPKGIVIRVNAIKGFTNYPLKERLEALT
GVNVEIENDANCVALAEKFKGNAIHSDDFVALTLGTGIGAGIFMNGKLLR
GYSFMSGEIGFMITRGLGNNIPFNCRWESMASVAALRRRVAERLEMKFEE
VSGEYVFELADSGNIHARNEIEHFFETLSFGIFNLTFILNPEKILIGGGI
SSRSDLISRIYDKLENLWSLELAHIYNNDIKKLVRVETTKFNNDSGKIGA
LYHYFVENKLLCNLSV
>BT0230 transcription termination factor Rho
MDKKCAEFDLEDEMKRLNSSKELKIEDNSKKKIVKVVTKKESVASGLKNS
NIDKLRESNGVSSGFDYDISDPDLENSIKTLEQSNIINFLGGKDFIVIDS
LYDKPITEIRKVVEGLGTNHTIAVTMKKTELIFLLVKILTEHNINVLFTG
VLDVLSDGYGFLRTASNSYLSGGNDVYVSPSQIRLFNLRTGDILYGQIRS
PRDGERFFAMIKIKSINDQDPTFAQNRIPFDNLTPLYPSSKLDLEYENCN
ISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYPDIVLMI
LLIDERPEEVTDMIRGVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVEN
KKDVVILLDSITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARN
IEEGGSLTIIATALVDTGSKMDEVIFEEFKSTGNMELILDRSLADRRLFP
AINIKKSGTRKEELLLSEEERSKILLIRKILGGVDDYEGVEALVEKMKKS
KNNEIFLKTMSNGD
>BT0502 DNA-directed RNA polymerase alpha chain
MMSLGKLLKDFTIPDRIEFVRGEDDSSYGKFIMYPFEKGFGVTIGNTLRR
VLLSSIEGYAISAMRIQSNQGGSLKIVSSEFDLIPGVVEDTLEVIANIKN
IHLKLDEGVNSTTISLSVNGKDTNVLKAVHLEREGVEVFNKDLVIATLSS
EANLDFEFQINYGRGYVSSEQNAKYLEEVNTIALDSIFSPIEKVTYSVED
TRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVRDFLLPLVNFEDKVV
HSVENSELRDSDILSINIEKLNLSVRSLNCLTKENVKTLGELISKSAEDL
SKARNFGKKSLEEIIEKLNTYGLFLGMSKAEALKILNKNDKISH
>BT0771 RNA polymerase sigma factor RpoS
MNIFSNEDLNIYLKSVREHRLITHEEEIELAKQIKLGDLKAKNKMINANL
RLVLKIIKRYAGKGLKVEDLIQEGNLGLIRAAEKYDPSKNTKFSTYASFW
IKQSLQRALNTKTRLVKVPYRKENLILQINKYLMEEEKSPKKEDIMERFN
LTTAQYIKIIPYLEKEYSLDKKIEGSENSTLLNLYEDNSFNPESTLEQNS
TLKHLNHILETKLNEKERYIIIKRYNLDNSDKKSTLKDISNELGISSETV
RQIEKRVLKKLKEELYQ
>BT0527 Bvg accessory factor
MMSKLVASVQLIIDIGNTSISFALYGLDKMQIFCKLSTKRDLSFKELYEF
LKFKFDCKVDQVFVSSVVPVIDKVLINVIVALYKVNPLFIRFDLNYDLSF
DLYNTNRFVLGSDVFANLVGAIEYYNINDALVVDLGTACTIFAISRKEGI
LGGLINGGPFTSLNALIENAYLLTDFDLAVPKKLLGLSTVDSVNSGVIYQ
YKYLIEGVYHDLMRNYDRKFKLIITGGNSYLVLPLISLDFVSNLYLTLEG
IRILGNAFKVVY
>BT0355 CarD-like transcriptional regulator
MAFVLDQAVVYPMQGVGKIKNIQNKEFNGEFIDYYEIYFPFNEMTFMVPV
SRADDLGIRALVSKEKVEEVFNIIKDFEEQIDQKKIKDGSHDFYKQSDIL
STAKLYKFLYTKSMQKELPFYEKRILNDFELILQHEISLALQISFEEAKQ
KIKEVLSMGKS
>BT0132 transcription elongation factor GreA
MSNITIERLDNILQEDKWTRIVVNNYSLAKIRELDELIDSIISENLTEEA
LDICGKHLKDVKKSIAGLYISGMLIYSRRPLNDMSLLTVVDLFSQNLKWS
LVEHICHKMLLTSENKHALYTLAKIYSQNNENDKLPGIWMRIVEADVDDT
VCVRQLATHYENIDLQKSIYFFRKAIYRFIDKKQMSGIREVWSKLIRYVS
DDFDSFLLILQKVEKELGFKKVVVLYEDLYEHYSVSENIDETIEILKGIL
KLDNKNQKARENLVIFLREKYKDVKNIEEYLEKSDLENLDKNFIDVYSDF
EKYLFFAKGNFVYHQTWFVGIVKDVNEQGIVVDFVSKRRHFISFDMAMSA
LSPLKKEDIRVLKAIKPKEELVENLKRDVEWALRIIIKSYKSIDLKGIKR
ELVPSLMTQSAWNAWSVKAKQILKDNPHFVMASGKADCYIYNERASNFNE
KIYDKFKVEKDFYKRYEIFMHYCTAGGVVKDLHVEEEMLNYFLIYVNNFA
KVDHYVISSYVILKSLKNSERGGAFKINIEKDINLDVLLKEYSKNIVDLF
DSILNAEIKKELVSLIKDELVDWVVYYKQLFPCYVNKKLIDSLYKEDIKE
TAHLFNYIIKNYKVYKDAYIWLLKHYTSYSLDLDYSDSELLINLIKILTD
SVVKINNKNNSVANKRIYKMVMNLLIKDKYLSIVLNNVMDEELAKRIYMT
CFYIRDFPPKDLLHIKTAIRSVFIDLEFEDEKMQSSGDKVEIGFLTILSS
LSKKQKELQYLKDVEIPENSKEIGKARELGDLKENAEYHSAKERQQFLTK
RLNSLMSEIDFAKVIDTKELQSSVVGFGTKVTMINKDTKREESYLIFGPW
ESNPDEGIISYKSPFGENLLDAKEGDNLDFVINDTHFQYYVKKIEPAKIN
>BT0693 xylose repressor
MQGENMVSIRGGNRKKILLSLKNMQYSRTDLARKLSLTNAAVTILTNHMI
KENILVEVGSKESGIKKHGRKEILLDINKDFAYSMGVIISSNYFQIGIAN
LKCEVLISETYSFEPPVSAYEILEKIKDHMIEIIWKHNFSRDKFIGLGFS
ITGIIKDKESGIVNDSHGAWIEKDVPVKAILEEYFSLTVYLESYVKNLSL
AEFMGKNVDNIMFFDYTDTAELSIWSGGNVYAGFNNKSGMVSHMVIDYGG
EKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYDKYESRLKKVT
IYDIFALHDKYEFIHRIMEDTVKYLAIVIINIQRVLDFNYLVLYGQSFKL
KSFFDLLKKEIKRLNKESIILKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID
>BT0388 DNA-directed RNA polymerase beta' chain
MKEIKDFEKIRIKIASPDQIRSWSYGEVKKSETINYRTLRPEKDGLFCER
IFGTTKEWECYCGKFKSIRYKGIICDRCNVEVTHFKVRRERMGHIELSAP
VAHIWYYKYIPSRIGLLLDITASNLNSILYYEKYIVIEPGDTDLKKMQLL
NEDEYSEAKERYGMSFSASMGAEAIKTLLENLDLDELSSKLRLQMIDKDD
KTDKKLLRRLEIIENFKVSGNKPEWMIMDVLPVIPPEIRPMVQLDGGRFA
TSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGTSNRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLHQCGIPAKMALELFKPFVIRKLIESESVFNIKRAKSLIEQEVDEVWQI
LDNVIKEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADF
DGDQMAVHVPLTPAAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLY
YLTMERKNVVGEGRKFSNFNHVLLAINNKSLDYNARIYVKVDGEYIETTA
GCVVFNEALPGKISFVNKTLSDYELQNLISEVYVVYGSSIVIEMLDIIKE
LGFKYATKFGCTISMSDIIVPEEKKVYVDKANREIAKIQNDYTKGVITGE
ERYNNVVSVWSKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQI
RQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTA
LKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVEALKNGEEIVEPLRE
KAVGSYSIERIKSPITGEIILDVNEEITEDKIKLLETVGIDKLVIRSVLT
CEAEHGVCQKCYGRDFSNNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKIALKNSFILNGLEGFNVQVDGGLLFTRKGTLRVINVIY
EEDIKDIKEFKVLDSQKVIKGMPLFTSKDGIDVLSSHIGYVRIKDNKLMI
VSEEQEISLKTGTKLEVNVGDYVEAGRVIGTFDPFAEPIIAEVRGKVKFK
DIILGTTLKEEINLETGNIEKRITDQVFESLDPRILIINDRGIEIASYVL
PGDAYLQVEDGQDIDIGDIIAKLSKGSEKTQDITGGLPRVNDLFETRIPK
NLTEMAKVSGVVQFKAIQKGKRLINVLDEYGVEHKHYIPAGKHLLVRDGD
VVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKH
IGVIIKQMMKKVKIVSVGDTNFVYNQKVDKHTFYEQNKRVIEQGGEPAVA
SPILIGITKASLNIDSFISAASFQETTKVLTDASIAGSVDDLKGLKENVV
IGHLIPTGTGMNLYKRVKVRENSSSEM
>BT0800 N utilization substance protein A
MMLRRLNYREGVLDMIKGTGQMIANIANERGMSIDAIRKTVRESIMIAYK
KYFGTSENALIKFDEDTGDLIVYSKKKIVEEVQDDILEILKDDSQEFEVM
EDGYAYIEIDPKIFDRLSIQVAKQRTKSDLQGIEDNELYLEFKHKLHKIV
IGYVQQNRNGDLYVNLGSTDGVIPKKYQSPREVYGLNDKVRVLVYSVKKG
KNGIEVVLSRTHPKFIEELLTLEIPEIEEGLIKIHKIVRDPGYRTKVAVY
SEKEEIDPVGPCIGQKGVRIQSIIKELEGEKIDIIPYSKDIKEFIRDALT
PAKIDNVYIVDEDLHKALVVVSDEQLSLAIGKMGQNVRLANRLLDWAIDV
KTSSQFAEMKASGEFKQETFEMFDKIIQDNVQEDEFEEINKISELKILDN
DIVDKLVEAGFDDIDSFLDASEEKLFELGIGYEKQEEINKILKEGMVIIS
NDDGSIEGMKDEEELLCPECGAVINENMTFCPGCKIGLSFEFEEE
>BT0347 fibronectin-binding protein
MSLNYSEINILLKEVPLKNSFLRKIKQPNHKTLIMELYNKETEKKNFNIL
ISLDPKKTRIHKTNKKFENTKPPLRFFEFLKSKVQNGKILEAYQIKNERI
ILIKVFKDKIIIFIFIKLWPSSPNIIATDANFKILDAYYRKPRSKEITGE
IFTKAKEIIENNDITDKKEVKLKDGYNNEISYSEFIENYYDNLEIKETQA
HNIELLKQKYEKEKINLEKKINSLEKQINSIEKIEDQRKKGEMILSNINK
IKKGMDEIILNNNNGEQIKIMLDKALLPKDNALKYFKEYKKNKNSLKIIQ
EQLEYAKTQYNTLISKTAYIDKTDCIIPTNEKTKKQKITKKPSIGLHFIS
YGFEVVIGRNAKENDALLRNWAKGNDYWLHTRDYPGAYVFIRSKKDKTPP
LEVLIDAGNLCVFYTKPARQSGEADLYYTNVKYLRRIKGEKKGLVIPNRE
KNLNIKLDNKILNKLKNKN
>BT0712 RNA polymerase sigma factor RpoD
MNSVENKDLQIFKKKNSKIIKAILSHLGDKKAITFEDLSTFLSGDMLDPD
NIDYIYGVLENEGISLVNEKMESDICDIDEFDEADKLDSQCMMLDDSIQS
DDEIDDKLDEFDDEVLDKEDFSSGYIKSGLLKDSNSEDPIRLYLKEIGKE
FLLTGNQEVELAKQMDSGESIIENILKNEGLVIENYYNLVNAIYSRVDKE
EFFKKEKEREKDNNFDYYNKKKRITSFYKASLKPFQDRLIKYIERKHSLY
ELGEDIFEESITSERLHIKEMLKSVPLYQEELRIFSDDYIDSASKIKDLK
RQQKSILDRLKIDKVRNLRILGRDLAIPERRERIEKSLNIREDLIKEQIT
EAQLAQKELERIEMYYEYPMDKIISMSEEILKGKQMMQHAKDQLIKANLR
LVVSIAKKYANRGLHFFDLVQEGNIGLIKAVEKFEYKRGFKFSTYATWWI
RQAITRSISDQARTIRVPVHMIEQINRLNRETRYLVQVLGKDPTDEELSS
RLGWDLKKVKTVKNVSREPVSLETPIGEEEDSVLSDFIEDKAIKNPAKHT
SFVVLQDQIRAVLGTLPEREQEVVKMRFGLEDGYSLTLEEVGLHFNVTRE
RIRQIESKALRRLKNPKKTQKLKDYLEDLN
>BT0522A two-component response regulator
MNSNNVISILNEFSLKLEDIFLLINTYSYELYKETPRYFYDDITNCLELT
LEIVNKFQGEFEGSQDLSLGKFLIRSMKCDLVSYLYLSLELIDNSMHYSG
IRDAGIAFFKAIAYKISSIISYIEIELENVFLSSSLASRQALNKDGHKIL
IFSCDSIYSKRLTDYLILGDYIVVSADAVDLFNQLLCNDFYDLIILDLSS
DEDIQLILNLLKNIKNNGLYEMIPVIVISQISEKDIIQIFIEERVDDYFL
KSLDFLVLGIRISSFIEKKKIIEQGQKYLDFVLRGRKYFESELIEAGNYI
ENLLPKKMQNEFFNSNWIFVPSKRIGGDFFNYYFVNDDNLIIYLIDISGH
GIGSALLSLSVSSVINSYIMNNNDISPSEVLRYVNRYFVKFKSDMFITLW
YGVLNVKTRHLRFASAGAPPAVVLNAKDNVYLQTRGAILGIKEMYSCEEN
ECILSKFSHLLLFSDGVYEVENEQDVIMAIDDFYKILKDNTYDLDDFILV
RLYKKMLNLSRYNAFRDDFSILEFILN


# Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

>LBF_3015 Serine phosphatase RsbU, regulator of sigma subunit
MKQTITIILLCLFHSVLWAEESSCPNAKHYPISTNLGKPTDLSHHLVFTS
TEIPKKEIHEIQRLFQTNPVAFANGEIPNFGNTANQFWFCFVLHNDENHN
KRTITFIKYPLLDEVQFFALRESGEINKNIQGRRYPFRNRDKDYRGFSFA
TELLPSETVTYFVGVKTDSSVSVPLMIADEKHFDSYESIDTLLQGMFFGI
VCVMSLYNLFVYFMVKDKAYLFYVNYLILAAILFQLSLQGLLPVLFLPDA
PDLVYNAHNFLYFIFLLSCFPMSITFMNLKDNAPILYRVFMGLSIIPVIC
LLLLPFLPYRPLNQFGDLLSFCLAFYALFVSYYVSFVKKFPPARFYFFGY
FMLIIGGLTTVLKYMGFFPVNVFTENAFQAATATEVLLMAFGLGDRISVV
QKEKERIQLKAEINKQKLIAYGKELKLAQKLQESTLPQILPKFPGLSIKT
GYFPASLVGGDFYDLTVYGKQQICGLIADVTGHGVPAAIEAAMLKIAYMQ
TLAFANKPGKVLESINVSLAGNYKNQFLTASAIFIDLEQKVLRVANAGHP
ALYKFNENSKSIEVIRPKGKLIGYSKEGMYPEEVHSLIKGDKLFLFTDGI
WDLWENGDSGEEVLLDWLFQRKGESVESLYGGIDEHIRLRNKEGPADDDI
TFILFEIT
>LBF_4230 Transcriptional regulator, ArsR family
MDLRRDVFQAIADPTRRAILLLLATQSMTAGAIASQFDSKRPTISKHLLI
LTECELLHREPIGREMYYHLNPNKMKEIANFIAPFQKLWDDRFNNLESVM
KDYKRKA
>LBF_1008 Serine phosphatase RsbU, regulator of sigma subunit
MKPILSKFTLLFTLYSLLVIPIFADANEDMGERLVFTKEFTYWIDTKSNT
PVDSVLTTGKFQAIDDEFANFGFLKGTLWLRLDPNQFPDPTKFPLLLVQA
HNIDLVELYHKHEGDSFIVSKSGHIQPMFQREIPHRNFVFRLGHQKETIL
IAIKSDISLQFSLVFTNQRNLQREDYVTQWVYGLFFGSLGIIILYNLAIA
FFVRDKSYFYYIGYVLFFGLGQLSLLGFFGYFFVPNSYYWKRVGIPVFFS
LCLFFFVLFTANFLKIKARLPRTTRFYFLLGAFSLFNVCIALFGGVAEAS
IGVSWLSVSICLTLFGILIWGLKKRIRSFYYISIAFFLLLLTCVIYGMLK
FGILPSNSFLEEMLFPIASLADITLFAFALADRIQLLRQEKDLALAQVTS
LRRERKISRDILMQSLPKTSPNVKNLQIQIYIQPMKDVGGDFYEYHSPNP
YELGIVLCDVSGHGIPASLISAMGKVAFTTQKDSISSPKQVLEGMNRVLF
GNCSPQYVTASYLYLNSSTKIWRFGRAGHPSAFLQRSSGEIIKVHPKGKI
IGVFPEIQIDETTYPVLPKDRILLLSDGVLECFDPKGNMFGDTGLIEFLK
TNRELPNHLFKGKLIQTLESFSNREIKDWEDDLTFIFLELV
>LBF_2736 Conserved hypothetical protein
MTIVEKVTFRILLPDDHENISQISNWYFEEWKIPIEKSVTKLNTVANDQS
QFQVIMYLDSVPVATGGIYNHVGLLDLQPRFKIHKHWLGLVYTDPRLRRM
GFGALLCEHLELLARNRGIPELFLFSDTAVALYKRLGWIELEEVAYGNRI
VTVMKKGILE
>LBF_2156 Hypothetical protein
MRSLKNHLDNKLKSKSFKEKFEEEKELVNISIELQSLREKKGLSQSDLAK
KAHVTQQQLSKIENGINCNLSTFLKVCHALDLEISIKNRKLSA
>LBF_1063 Transcriptional regulator
MSLKPKEKILESSFALFREKGFQATGIAEILERAGAYKKTLYDHFKSKDD
IGFEYLNYLSEQQRIVMLKVLGKANDLSDFIEKWVNFIVRNQRNTSRKDC
PIALFSGEISHLNQFDTYRNRAVQHVLETVEFCILKFEPNLRSDLVKSLS
YELYMSYLGGLRLYALTKDRKVIERMKSQMIHSAQRLIKA
>LBF_3241 Transcriptional regulator, AcrR-family
MKKEPTKLRLLSVSRNLFLRQGYSETGLNQIVDEAKTVKASLYQHFSSKE
ELGKEVLKLYSDENLNLLKTLMKRNPKPLDFIKAWVRILTREARQSQLFG
CGMANFRAQISPVETQIRSEIERIANETIECLTEFLKESIQNGYIKPDVN
PSTLAKQLFIVYEGVLQSYRLLDDKKSLDELYKIAENLIPIPE
>LBF_3358 ParB-like protein
MALGKGKVLGRGLGNLIPVNENNVEISKEELSGLREIKVSEISPNPHQPR
KQFSDVSIQELSNTIIEHGVIQPIVVQKNPSGSGFILVAGERRLRACKLA
GFAKIPAIVRDLSEADMMELALIENIQRENLNPMDEAYAYQAIIDKRALK
VTDLATRVGKNRATISNLIRLLSLPKPLQDWVKEGKLSEGQARPLLSIPD
SKKQFEVAQKVISESWNVREVENYVSNLLNPDKKSNSSSSVPDKRDVSIV
KLETKLRNKFSSKVEVSHNETNGKGKIVFSYANLSDMERILEQLGVKL
>LBF_0720 Transcriptional regulator, AcrR-family
MAVTKHFNESFERISEEKRTRILSIAISEFANRGFTSANTNTIAQKAGIS
VGSLYKYFETKEDFFLTVVDYGITQLEKTLETVLSMDLDFFGKVEKIVRI
IQNHSRMNQDIIRLYNEMTTESNYELITRLSGELESLSAKCYIDMIDTAK
KEGTIASDVDSNLSAFLLDNLFMTLQFSYATVYYKERMKIYLGDGVFGDD
EGVVQAVMKFIRRALGAR
>LBF_0119 Transcriptional regulator, AcrR-family
MGKGEDTKSLILDKAVQMASVQGLEGLTIGSLADELGMSKSGLFAKFASK
ENLQIEVLRVGSELFRRNVVYPALKTKPGLARLKMAFQMWLSWANTESLP
GGCLFLASSSEFDDRPGVVRDHLKKTQLSWQNTLKQFVQDAKDCLELDAN
TNVDKMVQEIWGLILGFHFYNRLLEDKNSEKRTKQSFNELIKRHKYDF
>LBF_2943 Transcriptional regulator, AcrR-family
MKPSKKQTTPKKSANLRKTSDLPSKQSSQSKISDTTGSAYHHGNLREEVL
EHSRNVLEKTGVSSLSLRDIAQDLGVSHTAPYRHFPKKMDLLQALVAQGF
KELALAMKEAWDHSEDPLEKIRKAGERYIYLLLNNPRRTELMFGGEIYVS
GDPISEELRECGNEAYMGMFRIVEYGQNQLVLKKSVPTATLMMSFWSGVH
GFAVLNERKWKQIQSNEEEKQSFEKEVGQILEIMIEGTRL
>LBF_0233 Transcriptional regulator
MNPSTARAASKLNLIRLLASHPEGLSLEEIQGVTGHKSIASLKKDLGELY
MIEMYPYSPTDAVDLDFDGDKVKIRLPIAVDSALPLSPKEWAALRSLLLS
EKGQGGEIRQSILKKIDSVLPSGEWSPHQKTKKMVQEAIHSKKILTIVYW
KRNTKEKETRTLAPWLLLEENDSYLLAYDLKKEGFRSFRLDFILDITITD
LEYPNLPETASEFLQGFKQKFETNSDPETNVTLWVTDSASYHLSLKLPLN
ETGNVKQIQNTTFREFQTPLRDKNWLIQTILGYGPSILVSEPNEIKESIR
LHLQSISLSKENKSIET
>LBF_2717 Conserved hypothetical protein
MIGDLQIPLLLSLAALVSNFSVLLLTLGKNFPILITIRFVSIVLILGNSF
LIGTFLSGSEGEAYVYFHLFRSVIFFIPYLFLKVTYNLTARKQNSRLLQI
ALLLTIFYVLFINIDYLRSESLLIAGWNRNPWGFWPILHLRAKIFIGIGF
FIPFLISLYLLLNPKETLEKENLNFSFLLVVWWIGFSCNFLALFGVNVFP
FGMAIDTIISVLFSLLLTRYWRSHFFVLAIEFFSVLSCTILCFILIHWAM
DFNFSIRYFGSFIIGMVFVFFLFHFFQFMKSKNSNPFLWNRDIDLKNGTF
QFEFDTTKLKQKLNYYDVTKKEIQIAEMITRGFSKKQIRFYLDITDGTFR
NHLSNLYAKTIDLESPQTTGDKFQRLIYFLTK
>LBF_2438 Response regulator
MKILILEDEPVHAKFLTKLLNIVLESSIKEIKHVTSIDEADKELKSSPID
LLFLDLNIFGFDGFDILERIPTIFTNTIVVSANTDNAIRAFEYGVIDFIP
KPISEERLRLALERHSLFAITYQKGGDQQKNVKSRLLQVDLDRVQNRLLH
LMEIEKIYLNEDLTLEVLAEELELHPRQLSEFLNGKKQTTFNSFLHSYRI
KEAKVLLLKYPEKNVSDIGFEVGYKSLSSFYEAFKKELKITASEFRQKNS
ISETT
>LBF_0338 ATP-dependent DNA helicase, recG-related
MFDVTQSLSNLKGIGPKRKTVLLEHGISTYYELLTYFPRRYLDRNFTKDI
ILKQGDVVTLLGSIVDSYIVHGKKSRLLVGFRTLNNERINLVFFRGVNFF
QKLFAIDKKVVVSGKLEYFRGYQILHPEYEFLSDADDPEDSIHAGRIIPL
YPSTEALKEDGLDSKGLRKLIHQVLEAGTISENLPSKFIKKRKLLGRDEA
FRNIHFPDTMETVQIARKRFAYEEFYYFQRLLLYKQRERQKVKRLLWPLP
KSPSRTNLEKNLPFELTEDQKSAVTTILSKTNSDSPSAFLLQGDVGSGKT
ITALLVGLHYIDNHIQVVFLAPTEILARQHYQTIYKFMGNMPFLGIELLL
GGENKKTRAEKLSRIKTGESNIIIGTHSLLQEDVIFSDLGLVVIDEQHKF
GVDQRETIRAKGKNPDILAMTATPIPRTLCLTLYGDLTLVNIKTKPKGRK
PIDTRWYKEDRRAGVYNSIRKYVSSGRQCYIVYPLVEESEKVDLESCTVA
YENLRTTVFPDLKIGLLHGKMKSVEKESVMEKFKSGEIQILVTTTVVEVG
VDVPNATILVVEHAERFGISQLHQLRGRVGRSDLESFCILMTGDSISEEG
RDRLEALVASNDGYYLAEKDLAIRGPGELLGVKQSGLPEFKIADLVVDRE
LLDEAKEDASSIPLDDPNEVSELRIRFSEGKFLFAN
>LBF_1549 Acetyltransferase
MEPIGHGYTIERITNPTDSLQEDLWLRLHEYSISKLGDKSLESKEFFAIL
VKEGDTLIAASLCYLFFKGLNLQLLWVAEDKRGQDLGTKLLKEIESEAIK
LGATLIFGYSFGFQAPKFYLKLGYEEVGQIPNYPEGQNCYFLCKKLTNNS
P
>LBF_2928 Transcriptional regulator, AraC family
MHTLNRVLFSLAFLLLLEGCLWKPEVFYGRNISRDVEFLAPVKGIVPTTC
DHNSIQKLKQMHWVQNQSEDSLRSQRNPKGQWLHFQISNQLPTAMNFNVL
IQWINIPSAEMCSENQKGEIEDTYSGYVWENWLGVMSPFPHFQVTLESEE
SRDFYIYLLSNENLNFPIRTISNSSYRFIVLFRFLTFLFFLMMGIVSIGW
AVSEFIKSKEKVYISILLHFLLFFLLVYSVHGKELVTLFGNGNNIIRHSY
YLFLSINHFVFFLYLYYFVKFTNETLEHPKLFWMCAFAGFLYLLIPVFTK
LYDYRIFFVLTIFGSAAYFLRQTHISLVENKNKEERSYIFGWAMFLFLVF
LKTLFHFDFYPYQAFFIYASVFYLPFLTAGSFLFLRNYEKRDKNKTRFRT
VTNRIDTKDLKLKLESLLESEKVYLNENCNEEWIANLLNVSYHQLSELIN
VEFNLNFPTLLNLYRIKEAKKILLEKPELNVAEVGKMAGFGSRSAFYLEF
KKQSGVNPNQFRKATSHSKKDK
>LBF_3046 Receiver component of a two-component response regulator
MESVKIAILEDHSVVTEGIISILKSNPFFSLAGEFRTAADLFEFIATNPI
DVLILDIDLPDRNGIDVLREIKEKHQPTKVIIFSLHGSRVYVEDALKSKA
DGYMLKSDPIAKLPEVIQLVMKGGSFVSDGVSKVQLPFSPFQMEILNLLV
QGLSQNEVADRIQKSRKTVEYHLNQMRTKFSCKNNNELISKYEKEIQK
>LBF_2907 Serine phosphatase RsbU, regulator of sigma subunit
MRILSFFFPIFFSTIFSLVAEPVSISANSVVTLSENWTFTTNGVTNPIQV
GKGLSLQGILPPVEGYYETQFIYKPSNKPLGIYLDRVQEVDTFIVNGIRL
GQTGSVTNDGTYLPNWYYKRLYYIPNHVLKENSTNQLKIEIHFRNKTFQG
GLFRRVPIMGNYDKLHEQILIEDGRDFCFIMLFFGIGAYQIFSILLKRQA
KTNFYLLLSTLIFVMWRLPLLNISYTYTDFTFFFWLKVFFTSQTLLPVSI
FLFSYSLFQNKLSLKERLLVLFLITIAFVQTWNIELPTRILLLRIWEFSL
LFIVFFILRAVIRAARAKRTEAYFLSIGFICICFGATFDIIIDVTSGKNI
YLTQYGFLILMILSGVAISYRNAKNETELSILTKDLEIRVRERTIELREK
NQDLEQDLFFASQLQSYLLPKNHPNTKGIRIHTTYLPMRQVGGDLYDWVE
LDENRLILLIADVAGHGVPAAFVSSMVKVQFRESTKSIHSPKLILEHMNQ
ALTSLVSRYFITACCALVDTKENTIIFSTAGHPNPIIFNKIQKRFEFMKI
KGPIIGWKESFTFVEWKHQMQKGDRYFFFTDGVTEARAENKLFGEGKILD
LLEKGKDKDIKSLSQEIVVQITKYSEAELKDDVTFFFVDII
>LBF_1188 RNA polymerase sigma factor
MDELAVLPHLFRLEYSKIVSVLCKRYGFHQIETAEDIASETFLVASQAWG
NNGIPEKPVAWLYAVAKNKAKNLIQRDSLYQNKILPRYQIENYVEDHDFD
LSEENVKDSQLRMLFALSHPLIPLESQIGISLKILCGFGIEEIAKVFLSN
KETINKRLSRAKEKLRENNISLELPSSDDLKSRLTSVLRTIYLIFNEGYA
SHNQDKILRKDFCLEAIRLCTFLLENEKTNTPEVNALLSLFCFHISRFDA
RMNDAGEIVLFEDQNRNLWNQEFIQKGEYFFIQSNKDRNISKYHLEAAIA
YWHTLSEDKVDKWETIYTLYTGLLEFESSQILLLNRAYALFRFKGRDEAL
EELGRLDFPSNRYYFSLLGEIYCEFDRKKAKDCFRKAYSMAEKPSDRLAI
QKRMNLME
>LBF_2609 Serine phosphatase RsbU, regulator of sigma subunit
MKHYLRWITFLWSLVLLTCSVAEVPPVAEKGHLTAVSYLAQNNQIIPIVG
DWEYYPGMLFSPSELTEIKSIREPLYFTVPGVWTKSFLEKGFLAGDGYGT
FHVELLHGLKGIPLSIKVPEMESAYILFVDGERLASNGYVSTSYQSGIPE
YRPQIIDFIPKENQTSFLLQISNYHHRKGGPAQVIILGRTSDIHKQYEFQ
ILRDMLLVGSILFMGLYHIFLYWNRKKDPFTYWFALTCILVALRVFITGN
KYLVQVIPDLPWEIHLKLSYLSFFFITPIFAKYVYLLFKPYFSRRVYELL
KYVGYAFCCIVLLTRSSFYTYLMVPFQIFTLLGAIYTLLVLSRAIRDSQP
GSLIFLISFIVFVASFVNDILVNNLIINSPLTIHFGIFMMFFVQSIYIAR
NFSKGFVDAENLAIELSEKNQTLQKVQNQITILNERLETRVKEKTIELQS
KLDQITKDMKLAKSIIQSVTKVPEMEPHLRVDILYKPTADVGGDIFFVKR
IQDFYYRFFLGDATGHGLQAALYSMMIQSEFERVSAVAMRPNDLLFYMNQ
HFYDKNADLQIYFPALVMDFDFHQNILRYAGGGVQNQIILKKNNESLIVE
NTGPIIGILEHYRYGIFESKVESGDRIFLFTDGLFEELNEADGMQAWDDL
MQTIQSTNELPFQEIIPSIQTMLFQKMNKTTWKDDSTLIVIEIT
>LBF_1715 Serine phosphatase RsbU, regulator of sigma subunit
MVDFKVSKRMLVNFRGQNKVVGGLTDKDKIAILLYISKEFANLDREDQLF
DKVILICQEIFESDNTTLRLWDGEFLVPVKFVKETEPPRRNLKAGEGYSG
TVFETKEPILVNDLSRSAHYFDEGEKTKSVMCVPIMQKEEILGTLAVESE
RENFYIIDDLEILEALTSQLALALYGVRLIEGLVTARAREAAILNQLEWD
LKMGRNVQSQILPQDLSAWNGIYFASHYEPMAEVSGDLVDIVRQGHSLTA
INIDVSGHGIPAALVTMAIHHQFRRSVMAGLGLTEIMEELGEKLREQLPE
STYFTAFMVRIFSDYTFGYVNAGHQRMLHYKASDDTFIQYDTKGVPLGIL
PVRKADYEEKQGKLEPGDFLLLISDGFSEQRNHLKDEVGVERIQTWLHDE
REKLVIEGRGKVDLKKLSAAFIKRFRAYQGEVPNGDDLSFLFLYCGDSIP
EASHYIQLAKQSNSKMKMEEAYAQALKAFSIDSSLKEILVFLGKMYYRDG
KYKEAIRYLEEYLRTSGDNTAASHFTMGRAYYKAGMISEAKRALKMALSS
DHSFAKASILLAQCYLKENAKPKAIKVLQQGVKNTPQSLELKTSLLRLES
HTQKVS
>LBF_0094 Response regulator
MINLLAVDDEMINLMIIDESLSDKGFTVVKAKDGEEAFQILSSGVMLFHA
IILDRLMPKMDGIELLKKIKRSEKYRDIPVIFQTAMSSITDMTEGLDAGA
FYYLTKPYSRALLVRIVQTAVEHFIKLQRAKEDLHKGMGALRHMVSGEFR
IRSIRESHELAPLLANACPDPERVLTGIMEILNNAIEHGNLGISYQEKSE
LHDNDKLMEEIFRRLDTPEYKDKFVKVSFERNEERIEIRISDQGKGFDWK
RFLSIEAMTKNAFKTHGRGIFMAKKLSFDDLTYIDEGRTAIIRIDLTNKT
SNLLTDFQE
>LBF_5009 Serine phosphatase RsbU, regulator of sigma subunit
MIQRDLLFNLWLLIVFLSITSCTSKLPERPIIQYSFQNLTLEQVLSEDVV
WSKPEEMKYNFGYWKRYVWVKFELINHSESPSQYILDIESPWVDEVILAW
KSLATVNTIEYRGSDSHTLKEIPHRNPVFSLDLSPNEKRIVYLKITNVGI
LSAPLRIWTRNSFFDRVERDYIANGIYFGIIFALLLYNLLIFVSVKEKAY
LFYCLYLTTLLINYALLGGFFKQLLIPESYLNIKPYLYTSVNASLLFVGL
FSLTFLNLKSLNPKLDRLILGSAVTIGVFSVFSFFIPYHWMEISFIYTFP
YFLLLLVSSGIYSYWKGVKSSQFFVLAWVTLFVGVIVDSLTKASILPTTT
FGRYGVQIGTAFEVILFSLALGRRLRFLLEENISSQNQLTTIRKDLETAR
RIQMRILPAEVPKSHQFSAIVSYLPLYDIGGDFYDYFDSNENELGIVIAD
VTGHGVSAALDSSTVKIAFRNAKGFMHSPKQLMAEMNRFLCTSLNARFVS
AAYFYFDFDQMKLTFSSAGNPPLILIRDREVQSVECPGLLLGVKPDFSYE
QNEILLKKGDRLLIFTDGLYENLKPNEDMYSILFPEIRPIVGLAHHDFHQ
KLLERLSSVRTILKDDITFISLDIV
>LBF_0383 Sensor protein of a two-component response regulator
MIKILLIEDEPGIQETIQIALEAEGFSLSIAPTGIQGLQMLADDISLILL
DIGLPDQSGFEVLKSIRKAASIPVIFLTARSSEIDKVLGLEIGADDYIVK
PFSPRELLARIRAILRRTQNPLVLEQKSNQKLRISLDKKLVYYNGKNLNL
SPYEYKTMELFFKWPGRIFTREEIMDSVWTEPEDSFDRAVDTVIKNIRAR
FKEMDPNFDPIETRRGQGYGLKETI
>LBF_1049 Response regulator of the LytR/AlgR family
MKILIVEDEEVAARGLERLLRELLGKKISSLHVEKSLLGSRCFLQENPID
LLFLDLNLDGDFGFDLLKESSAASFITIITSGNTAEAILAFEYGVLDFVP
KPISRERLEKALKKYFSNSGQNQTKYIGIKEDHHLKLIPTKEILYIEADD
KKVKLFQKNGKIVSHYKSLELLSKILPGNFKRIHRSYIVNQRYINQILVS
PGGSYQVELVTGIKLKMGRNYYKDLKATLYAKVS
>LBF_0359 Transcriptional regulator
MRINEFFSSFIKIHILHHCLKEEIYGVWMIEELREHGYKISPGSLYPLLK
HLEEKGLIRSRVEQLGKVKRKFYRITPRGKKELTSAKIKLKELIGEILN
>LBF_3294 Transcription antiterminator
MSETNPHSEESAWYIVYTKPRAEKKLSELLRKYHIENYLPIRKERKKWTD
RFKWIHVPVLPSYIFVRIVFWRDKNKVLQLPGSVQFVFHKGQPAIVEQND
LDVLEKGLQEYAESLKMNPELLLQKGKLVRIIDGSFVGKTMEIIKVKNKT
LVVCRIPGVETIFSYEINMDHMAWEELIQ
>LBF_5006 Transcriptional regulator, AcrR-family
MPVPQKIPNKSDNKKQLARERSTERILASAIVLFSKHGFAQTTMEMIANH
AKISKGLAYNYFKSKNQIFEQIIDSHLAKQERFYNNIPPNLSAKEYVREF
FIRSIQFAKEERKTMVLITVCLFQPSAVSLSKKMIENVERRFAPFKEAMR
ERFRAYGIKDPDKEMIFIKTFLHGVIMSQHFNDTTMCTPTIIEMLLERYD
SK
>LBF_1734 Transcriptional regulator, marR family
MARELPKRFRSVRYFDRISSEIADIVRTEMEKLGFPGLTTSHFEILTFLI
RTSKPINMTQIAKTIEKTKPTCTVLVNRLVKEGLVDRNPSPSDGREWAIL
LSKEGKKIRKKIVTISAKLLSLQTWGISKENEDILYPILDEIYKHIRNRR
GIV
>LBF_2951 Hypothetical protein
MLRKLLTFQFPKSFSFAIGLTLFFGSFPVLVANPDLLEGDIYYYDTVGQN
RSRPPQRPHPNNLHVPTIPAKQEITVFSNAATDKTAYPYIQTAINFVEGH
FSFKAFLADGTEVSYSTRGEHVRYSKCFGELCIIISQKNVLGVSNTSTEW
EKGHIFGEERYEVAVGHRAALVASDRKLYLYNSYTNHWETISLEQETLRS
FANLYDKVAIITSRRILVIDLTTEAQFEQNLLLRRIYQFELRDGFINFYS
GDKLWMFRHQTEAFEEVDLTD
>LBF_3233 Serine phosphatase RsbU, regulator of sigma subunit
MKVLRDSFIIGFLFVFCFEVQAESESIDLTLLQNKPIHLSQSMLVLEDPT
NSLDFHRIKSIESNLLFQKIPTAKEAFNFSYSKSTYWLKVSISNPNQHSM
ETNLVVSYPRLKTLDLYLESKEGVKYVPSGYSVPSNKRPYQSRFFVFPIV
FSGNSNTNVYLKVNSPNAINLPVQIWKQKSYDRHEIDDHVIQAIYFGITL
AMIVFNLFVFFILKDVSYFLYVLVVISTSVAIAIHNGIASEYLWNDSSWL
DQYAINLMISIVLILFLIFMRTLLQTKIVLPKFEPWNWFFVFLQIGLSIA
YIISFDTFIKVFVLSHTVTSFWILLIGILCSIKKQRIAYFFLLAFAFLFL
ALIVSTLRALGYIPTNVFTIEGPQYGSAAEMMLLAFALADRYNTIIKEKE
IAENRVKLNLERSNLELEEKVKERTSKLNQTLSVLRRDLDVAKKIQENSI
LIDPKLRNALKLHYRYLPVTEVGGDFFDIIHLKDSSYRIFIADATGHGVH
AAMITMAIKGLYDPIKEFELPPHKVIEIFNEEFMDNFVSLNSLLTAMIID
IHTESKIIEFASAGHPSAVLIQKGNLKLLPKTGRMIGIKKQSHYEKMEIP
FGTGDRLFVFTDGAYEAFNHNEEEFGEDKLHQLLLETIHLPLVEVEDTLL
KTLQNFQNGPDRQDDLTILSFDL
>LBF_3159 Transcriptional regulator
MSESPLLLVIDVGNTNTVFGVFREGEETPDFHKRTVTRRDRTSDELGLFL
KGFLTQENVKADRVKKAIYSSVVPSLNPIVERMLEDWFDVNPLRVHYQMN
LNFGISYPRPFEIGADRLVNAAYCAKMYPGKKAILVDLGTATTFCVISEK
PEYIGGVIAPGLKISMDALTRNTAQLPPIVFGSPKHVLGDSTVESIQAGF
FFGWIGLLKEIVRAIKDEHPGDYVVVGTGGLVTTIHASHNQVFDEIDPMM
TLKGLKILADLNS
>LBF_1105 Transcriptional regulator, marR family
MMIETFSFLGIHLSDTLLQMRRYLSYEFELKKVGMKFEEWIQILPITKEE
GLNQKQLSERLAKDKTTISRMVDGWVKKGWVKRIQTREDKRVFGLVLTGK
GKLIWEKGLPVVRDADQIFKKNLSEENEKELYMILFKIQSSLQFSETKNV
PY
>LBF_2409 Transcriptional regulator, AcrR-family
MDKLVDASLSPDLASRPFKFTSKQGRNRRAQLLSIAFELLKEKNPEEISF
ADICKKAKIPRPSAYHFFPNVEAIFHGIRLLHSEGMVEKLTALKEESFQT
WKEYIERSIEVAIEVTNSEIAFPRLIYGYRMSNPEMRLVGQELDLKLANL
TKQGLVEKFDIPSINTLDQVFGVAISIPDSLLKLSYRTFGDFTPWMIGEA
KKATISYLLNYLPEVCEPRK
>LBF_1465 Transcriptional regulator, marR family
MAKQKTSEPSQLKSHLGYHLRVVSNAVSHSFAKKLTNWDVTVAEWVILRE
MYSYKENSSPSIVAEFTGLSRGAVSKLIERLLQKGLVSREEAAIDRRYQE
IKLTKEGRKLVPKLSEIADENDISYFSVLSQKEREELRKILSKLTTAHKL
NLTPIE
>LBF_4088 Receiver component of a two-component response regulator
MNSILIGIIEDNLDYLNSLLEVLKPKESVSISTWNSAEDFYSNPPKEELQ
LLILDIGLPGESGIDVLKKYHTIDSRKSIVISSLQTDDVIFSAIKYGASG
YIWKSELDSLWETIQTIVEGGSVISPSIATKVLLAFRKPELNPKPTFPPK
NQTGLEILSPRERQILELIIEGDSPQQIAQLFGTTIGTVRQQIKTIYKKL
QVNTRVQMLKKARLFGIF
>LBF_0127 Transcription regulator
MQKLVNEIAELCCSATTKPTLTGIPRVLMIQGEVPEHQLAAVYEPLVGLV
VQGGKTISIGRQMVPMEGPSYFVIPTEMPATGSVRQAKNGRPYLSVALQL
DQKVLLDLLKDTPNTVAFKNDTDEFSACPATPEFLEVWLRMLRLMKTPEH
IAALAPAYEREILYHVLIGPEGWRLRQLFQSHQKGSSIHQSIQWVRQHFT
HSFEIEDLANKACMGITTFHRQFKSITGLSPIQFQKQLRLLEARKLLTYS
GYSVTDAALDVGYESTSQFNREYTRFFGASPARDTKRLKNDSNFH
>LBF_2187 Hypothetical protein
MKQEVKKASTTKSTFDRLMKNKSFKAKFDKEYDALNLSETLIELMESQKV
SVRELSKKANVSSTVIQEIRSGKQDNPTLLVLSKLIHTLGGEIVIKKGKK
TLASV
>LBF_2716 Transcriptional regulator, AcrR-family
MPKIVDHNLYRIELLSKSLPIFVSKGVASVSMRELSKELGVSTGTLYHYF
PTKEALFSSMVKHLVSSDAEAIHKLSEENANVNDIINFVSGKEGHFLNLM
LLAVDVKRQLSDSEELAQLVEESFTSYENALNRFFPKETEGKGGKAFLAF
FVGVLFLKLKGEPETSWIHLLEGLKYLGDLFSGDINEI
>LBF_0207 Transcriptional regulator (ArsR family)
MPKEGKGTDLVFKAMADPNRRKVLDLLFSKNGQTLGQLCEELEMQRQSAT
QHIEILINANLITVIWKGREKLHFINPVPIYEVYERWVRKFEENRLGFMH
DLKKQLEGENHGTT
>LBF_0165 Conserved hypothetical protein
MESQMVGCGKFPLKIIFLLIPVVLFFLHLSLLPQSNHNKRYVFILDASGS
MSEKWDGKTRMAVAKEKLIQVLGGLPKDASVGLVAYGNRIAGCQSARLYH
PIQKGGASIVSQKLTTIVPAGSTPIAQTLQVVGEYLLSDQLETEIIFISD
GVESCEGDPKSVLYNLRQSGKKFRLQILGIDIDPKGEEDLKRLSILGDGN
YFPLKTPEDYDRSFQRIFAHLETKESTIPSLSPPVKVSPVAPIPTLPNQG
MIQIVSILPYEEGSENGYIVNYEYSATHPTQYMIQLYLYPEEEKRRSFPI
PPLRERRMGDTVKQLVELKEGKEGKGRFVLSLPTGKRLKSSLELWDMSGV
PKIIALSVEKPIHEKPGFDRNDR
>LBF_0203 Transcriptional regulator, AcrR-family
MEKKKRVTVPKKAPQPPVMGRKRDPSLDALILNATLEMLAEEGFDGMTMD
QIATKVGTGKAACYRRWPSKVKLVKDALIWMNRNQLELEKIPDTGSLRND
FLAILKPHSMEEANAKLRVLGGLGTFWLDEEIEKKGITEIFGPWTEVNRT
LIQRAMERGEISKKANVELVCKVLNSMATYRALIERKPPDKALFIALIDQ
VVMPALKIPG
>LBF_2906 Transcriptional regulator
MTITQLRYIVALDQFKSFAKAAEHCLVAQPTLSLQIQKVEQELGFDLFDR
RKNPIITTKLGKEVVEQAKSTLKEADKLFEIAGQWKDEPAGNISLGIIPT
VSNYLIPSIYKKLQSEFPKVNFRISELPTLTIIEKLESEEIDLGILATPL
KISNVVELPLYYEPFVVYYPKDAKEKSTSVSMKHIEKYPLLVLGEEHCFR
HQSLKICNRNALAKIESGSVETLKRMVDMGIGVTLLPKLAVDKVSERIVP
FQSPEPAREISMVYKKGFYKTKILNKLSNLILNVIPKEYHKKEKFKVIGV
SIGQD
>LBF_2734 Superfamily II DNA and RNA helicase
MQKQIETFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCA
QTGTGKTAAFALPMIHNLISTRAKPNPKQPRSLVLVPTRELAIQVHESFV
LYGKYTQIRTAVIFGGVGQNPQAKAIASGLDVLIATPGRLVDLMNQNLVS
LKNLEIFVLDEADRMLDMGFIHDIRKIISYLPKRRQNLFFSATMPPEIEK
LANSILVEPIRIDVTPVSSTVELISQSVMYTELADKKNLLLHLFKDKNFK
KTIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFRSGKN
RALVATDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAI
AIAEADERSLIKDIEKVIGISIPVDRDHPYHAARVESHTGKAPKLHGSGG
GGNRGQRRPTQSGDSSSGRNRNSQQNSKQNSNRSQGQSEKRKPSDSGYKS
EPKKSSPSAKKSPRAKKSRYR
>LBF_3205 Transcriptional regulator, AcrR-family
MPRTGLTASEIQDRAVEIAIDQIREKGFEKVRLVDVAKGMGISHAALYSH
FQDKTALLDAVSERWLVKLDEQQESLVVEKRDPIQKILTWFLNLHRMKLE
KVKLDPELFKAFDMAAEESKPFIQTHLSNMRKQMSSLVVEAINQKKIKKR
DVNLITEILISAGTAFTHPKLVAQYSAENREPLLLETIEIVLKGLS
>LBF_1977 acetyltransferase
MEIFLNLIVRPAIEDDCKLIFEWANEPEVRNASFHSKKIEWSEHKNWFSE
KLQNPDSIIYIFEVDGEAAGQIRFDKNGEFFEIDYSIDKKYRGNGFGNAI
VRLGITNLKSQFKESIRVVARVKEGNLISAKVFQNIGFKETKLGNGDLQF
VYE
>LBF_4025 ParB-like protein
MSKKTEFQALDLISAYSEKKKNPSHLELNQIFPNPTQPRLIGREDTSDLV
PSMERLGLIEPILVRKDKGKYLIVAGERRYRAALKLGWKEIPAIITDANE
DVCYEMSLAENEKRKNLNPWEVGKAIQYLRKEKKKTADEVSVLLGYSERY
VKQLSSIARLDQKSVMELIISGKPLSVKNLEDLLKRKENRGGETISPRIG
MSQNKISINVGKLSTKVRENFLKELTSLKKKYGISD
>LBF_2997 Transcriptional regulator, AcrR-family
MKPGIRDTKKQITHTNLLESALELMGEEKGLGDLSLREVTAKAGIVPAAF
YRHFKSMEELGLHLVEECGNRIQMIVGDARTKGAYRSALQLTIGYFFDYV
TTHRSRFRFIARERTGGNRKIREKIREAMGRIAGELAKDMRMPKSLSKDD
TLFASELIVSLCFQMASDYLDLDPEEHFEMRKLKVKTIKQVRLVFIGTIR
GRKHKHRSSHKAMG
>LBF_0177 Receiver component of a two-component response regulator
MKKQVYIVDDHPLVVDALQNLIAKSEDLECIGSADNIEKAFNDIEQMQPT
LVLIDIQLKQNQNGLQLLKRLRTTFPNIAVIIISMLTDDTFVDRAFKLGA
MGYVFKEDTTTQIVEAIHTVLKGDYFVSSSQATRLLGHLYRASQKDEKDP
IDRLSNRELEVFLMIGEGMPVKEIAANMGLAPSTIETLRSRIKSKLSITE
NEKLIRVAVEWKYTQAKTDIVVS
>LBF_2429 Transcriptional regulator, AraC family
MERMSFFGQSIRVLNVRKWVVIIMVFLFGNCQMGEEELSEKRFRLFYASV
SVKENWDQRNLTLLDWKKLDAPLQLGFYTEPILFRVEWLDKEIPDELYLE
NQVAYFDSIELVQWTGSGRKWTTEGDLVPKRKHLFPNHPFPIFSIDTKSL
KDHPTFYLEAKTVSNFLFAPKLLTKDGILQSVMETRDHFLVFFSVLLIVF
ILNLSIYFNTRNTSFLYYCFYILCSGFYQISYTGYGKIYLWSDWIRWNDR
SLVFFGSIALWSVILFSNSFLLLSKRMPKLNRVMIVFSVLVVSNAILSLF
WKHIIFDQTIHFLAIFVSFTLMGAGIYVFFQKYQMAKYYIVAWFCLLLAI
ISFNLYAFNILPDHFILRNAIQYGNFFEIILFQFALFARIQETKEVPIFF
ATVSKPRLSEQRIANLNSDQILKDIDSALVTEKLYLDEDLNLQNVASKFR
LRTDQLSAIINQKQGINFNQWINGYRIREACQLMEKDPEKNILTIAFAVG
FNSKSAFNDAFKRVMGETPTEYRKRFLQLV
>LBF_2908 Response regulator
MEPTPYSVLIIEDEYPARMLMMDYVLNCPELKLAGIAESGDKANTLINEK
KFDLVFMDINLPVVNGMDILRSNHSKSTFFIITTAYSEHAVEAFDLDATD
YLLKPFSFERFRKSVEKALRFLQESKQNNSNENLNKIHLKIQSDSAVFLL
PYPDIQFISANNKSCVIHTTQKDYETPKLLKEIEEKLPTNQFVRIHKGFL
VNLSYVASLRYDKGGSYTIQLKNEDETTLPVGRSYAQSLKEALKL
>LBF_2401 Transcriptional regulator, AcrR-family
MVIKKKNQKLKKQLSKDVLVQTAISFADKNGIDSLSMRNLAQLLGVEAMS
LYNHIQNKDELIDGMVESCVILFSLPKVKGQWKKEMKRRARSVREVLLSH
PWLTILLVSRVNIGESMLRYFNDSIGCLVNAGFTYKQADQIINAIDSHIY
GFTLQELNFPFKPNEYKSKASEYLPMIPKNDLIYFYNLTKEVAMGKYNGK
QNFDFGLDLILDGLKFQSKK
>LBF_2657 SoxR-related transcriptional regulator
MNIGELSKSSGVTTKLIRHYESIGLIPKTRRTDNGYRLYSEDDVHYVRFI
KRSRELGFSLEDIKSLIGLWKNKSRSSKQVKQLAEKHLEELNLKLKQIKD
MTDTLKHLVNHCHGDHRPDCPILKKLETEA
>LBF_2778 Acetyltransferase
MEPNFKIRQVTTHDSQSQLCMDSLWDEIQTRYEFQAPNPMLFSDFLPPQG
KFFIAEEIGTNVAMGSAAYTKFSDKECELDVVYVFPKFRNKKVATFLLSE
LEQQSKIDGFTTMILRAGKPQEEALHFYKNFGFNEIPKFGKWVSDPTAIC
FEKKIK
>LBF_2413 AraC-family transcriptional regulator
MTTILMHVTKRKIPIELKYVAKDLYIYESKNSKKEILTFFADGFPGLVFF
HSHSQVKVIVGELSKVMEPVFLYGQTLEPIQIEIEGPFFFVMVQLFPSFV
EETLEIPISELTNSCWTIKKEEWQSESGFESSIQKHSSEMAADAILQFVK
SKAKKFSPDLTLHNCIETILESNGSCEIQNIANELGISERTLQRKFQKSV
GLTPKQFATIIRFHTSLHGLNEDKNIKLTDIAYENGYSDQSHFIRQFKSF
TKEKPFQFREKKGNMSGSSNF
>LBF_0893 Sigma factor regulatory protein
MTRSFYIYFKEIFHKPTRQEWDILKLAEPRFEKEYTYSVFLTHFIVYSLL
FVPPFADFRWDILPYLLGVTIIRFVLLLQFYTKSISLEKVIYLSGIIADG
LVYIVFIKGIQSFPSIGNFYLLNSYLMSFIIPILLYSTRLNPFGCVLSAI
YFSIFHFSYILNLPIELQNQTSLFSQYFLIIVYWGSALLGVVFVFNKRKD
TADVYSLSEEKRFMLQELELAKKVQDALFPGNIKIPNLTFTFYRKSPNVI
GGDFFDFVQLREGNVGVFLTDVAGHGISSAMVASIMKVLVSTIPYRFKTA
PARLMDYLDDRLTQDLNRYHASAIYLFFDFIEKKLTIGNAGHPYLILAKK
GEEFQELETQGAILGFNIKVPPISEKTLPIAQGDRFFIYTDGLIESMDHQ
GNCLGTEGLLDLLNRHKHCENVKELETQLLDELKTKYGLDTFSDDTMFLI
LEVEE
>LBF_4146 Response regulator
MYSLKKSCQKVSVNHPFCIVNSKLAAKILVVDDNETNMEIITHILLGQGF
EVAVAYDGEYALELAEVLDFDLILLDILLPGISGLEVAKRLLSMERHKNT
PILFLSALNETSDIVKGLETGAVDYITKPFQESEILARIRTHLKIKTLEK
ERIDLLYAIQKDLELAKANQEKLVTFQFPPSPHYEIFTSYKPMDLVGGDL
ITYDVLPSGDLDILFGDVTGHGIAAAMVSLMAIITFKTMNKSFLSPSECL
YWLHNTLTPLISTHFISAVYIRYRAEENLLSFSMAGHHHMFLLRNHQIKK
LGTKGFCLMMFPDLLNTNNEDIVLQSGDRLFLFSDGMFEVPNEKEEYMGD
QKFSEIVEKNIELPSQQLLDSISEEVLRFSEGKVADDMTMLLLEVK
>LBF_1442 Transcriptional regulator/sugar kinase
MRQAIGVDIGGGSIRVSLFDENGSELDSHHTKTPEHLDNDSFLEVLVESI
RPLVKNIIGIGVGSPGPLNNETGVMLTSANMAGLKNLPIKSVLQKEFSLP
VFYENDANCAALGEAIFGTYKNTESQLILTLGTGIGGGFVKQGKLYTGYL
GNGIEIGHTTSVIGGALCGCGVHGCVESYFSTKGFLNRYFEKTNTKLPNA
EAFFSLVRSNDSESKSILEFGTKALAHAVRNAIQLLNPEAVIFVGGITKS
YDLFGALLEKEIRSTIFSVLNDRLLLGPGGNISGTLGAASLVFVKEKN
>LBF_1366 Serine phosphatase RsbU, regulator of sigma subunit
MSSRKPDFGRYQHLESFIHLSKDAIWCYELDVPMPISLSKEEQMEYIWNH
SVVKECNLAMVKLYGFHSLEQVYGKYLKEIVNMESVYLLRKFIENSYLLE
DFEYKQLNTLVPKVFLLNSHGQVVDGHLVRIWGQQIEISSIRESESKLSE
LLQFSQIVTEVSKMFVHTKAEFVSDAIQFALEELGKYSKADRVFVAEISS
DKQFLSTSHEWLNGDVPSLFEVGTKLPISKMNPERLGVLAGDGVIFIPDT
TALREESWHLQLFKTAEVRSILVIGLRDEGNLIGILGVTTYQSLGEWNDE
TKQMLGLVARFVSQGLVRAKNEIKLMKKEKILQRFYSDIKEDMALAKMTQ
EAWVAKDFGAIPNLKIESRFLPYDDIGGDLILYEKPNPNCIDIFFGDISG
HGISSALVSGIAAVSFKKHSLLESSPSAILEAMHLDLKTIIFKHHISACV
MRIYPLERRIEFSFAGHPPVVFWNENDRVMKFVKDEMYPILLLDVWKGKN
ISKTFSKGDRLLLYSDGIYELEEEAGGYIGLDVFLQELSEMISVSDDTDS
LIKKMIANCLVEKDRIIHDDIAVLFLEF
>LBF_1080 Transcriptional regulator
MVSKVEQSSDGLDPLISESGDYITDVVKENLKLIRHTKGFSLDKLANRCG
VSRAMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKEKNQDGIHILKAE
NSKVLYSNSKVFASRALFPFLGNRKTEFYELILKPGGHEVAEPHKTGTTE
NLVVVSGKLRLRVGEKVVELEPKDSVFFKADVSHEYSNPTDQETLMYLVM
DYTDEIG
>LBF_3114 Response regulator
MKILIVDDEEDIAGLIQFHLEEEGFQTEVCHNGMEVLPRLEKNLPDGIIL
DLMLPGIGGMDLCKRIKEKYPQIPILMVTAKTGETDVVLGLELGADDYIR
KPFNIRELVARVRSVTRRTTDPSQEVQGTITTGKIQINPTAHKVFVEGTE
IDLTLIEFKLLQLFAGNPGVAFSRDKLLDRIWGKDVFVTDRTVDVNIKRL
RDKLLSEKERLETIRGVGYRFRDA
>LBF_1176 Transcriptional regulator, AraC family
MESDFKEPTIFIFTNDVIWLRGKTNDDGFAQGRILSLEWKALDFARLYYS
EQSKEFKFIDTGDTIPKSKWILPESLYPSFPIPKQNSGDYFYIRIQSKSL
ISFPIRSLSERSLNKRMIVETAITWLIIGVCAVMIVFALFYFFAFGLSEF
FFYAGYVVCTVLWYNGQYGNAYDVLWPESPWWQNKAILVFSTLGIPFSFQ
FVRMFLNTKVNNPRIDKILLIMGIIAMFCIPAILTSYTTKIFSRIATYIY
LISIPIILGTALKNYIKGEKQILFFLLSWGSYFIVSYNTMFYFLGILPYS
TPLLYSAVFIFPIDLFFLLFNLLQKYETLEGERNEILHRIVTLNNTQNAR
YVKSKLNSVNTEESLAKLESWMRVTKPYLDEKLDLEIASLAIGLTVQQTS
ELLNSKLGVSFRSYLNGFRIADAKKILKDKPDMSILSIAYATGFGSKTAF
NVEFKKATGQSPVQYRQSGGENKI
>LBF_1524 Serine phosphatase RsbU, regulator of sigma subunit
MKPNSLPPIILKNQDGGFYLSSSSELDDLYHFILGQAKRFVSAKSAAFYL
RNERGNLSRIGLISDKNNAGLIAKHVFKSKKSILVKKGTHLNPESAPASE
SYIACYLGDEIGDMSLGVLVLEGIKHFQNFSEQDLDLINYFSANLNALFK
DTVFSDKEPQFFNSLTTSVLLLIDNANIHNNNNRLQYFLEEIIRVAVLIN
TSVDLEHVLVMVMESAKSVFRTEASSLLLLDEKKEYLVFHTVTGEKREEV
SKIKVPVGQGIAGTVAVTKQPMIINDAQNDDRVFRDVDKASNFITRNILA
SPLIVGDEVIGVIEAINTIDRNNFSQDDIDTFLSFSSACAVAIQKTRLLD
NLNVTNLELKQKLSTLESIFDLGQAVLESHDELGLMSKTLSILTKELSCE
DAGMVIIEEKNKNRIQVYARQLGIVRESFFPMFESRLFLSLMESGNPRMA
VVTPQLEESFLELEFYTLKKNFLILPIAPRGGNLRAALYVSGKHSAHSFN
ETDLRMLKTLSSPLAKAYENLRLNQEIITKKSIEKEIEITRKIQNNILPN
GLIQSPLFDLGVMSVAAKEVSGDFYDFHAFGDEQFSFLVADVSGKSLPAA
IFMAMSSSIIRTLSRTTDLSPSELLFRANQLIYEDSQSGMFVTLFLVNYQ
RKTRTLKFASAGHNDQIWIRGDGSYELLKGKGAPLGVVPHTNYQGGEIQL
EPGDILVFYTDGAIEEKSPDGEEYGLDRFIEFIIQRRDAASQDIVEAVYD
DIRSFSNSEEQYDDFTVMVLKFAEVTSFEMVKSFDASPNEIPKLRDFISE
HLESKITKPFAFDDILISLDEAATNIVMHSYKDTEILNPKFECKFELIGD
KLKIVLVDEGKPFDRKKVPKPSVEANLKGERKGGFGVYLMETLMDKVSYE
YNGKQNITYLEKTIV
>LBF_1368 Response regulator of a two component regulatory system
MKPRILLVEDDEGLGETLKERLEQDKYRVEWAKTISEAENLYRPNAFDLV
VLDLRLPDGNGFDLAEMIVKKEKDLPFLFLTAQAGAQERLRGFELGAAEF
IPKPFHLKEFLIRLERVISLTRPHYGQKWKMDTKEIHLDSFLIKNEDGTS
TLLSKRDCSLLALLLTDPAKVFSRSEILDFIVGEDSFPTERTIDNAIVRL
RDALGEGSIRNVRGVGYQWIGPLQPLV
>LBF_1931 Transcriptional regulator, ArsR family
MKIKTELSKQQLEQAIKGIQGIAHPIRLLILYTLAKEEKTVGQLVELLGT
SQSAASQHLSKMKNNGILESRKSSNQVFYRLKDAKFKDLIQTIVKVYKK
>LBF_3111 RNA polymerase sigma subunit
MLMNRYQGMVHSQARKAFLSEEEAEDFTQDVFIKAYESLSLFRGEAQFST
WLFQIAKFRLTKVNKKKSHIFTDWSEDVATVADKSKPSVVDILDKEETHL
TLHSLIAKLPKSYQLPIRLHYFENKPLKEIANDLNIKLGTIKSHISRGKD
LLRKWWSHEIEG
>LBF_4001 ParB-like protein
MSLKSKRLGTLADIYQAENLDGTIRTIRMDRIQPSEHQPRQERKKGIEEL
AQTLKADGLLQPIIVSKGEKEGNYKIIAGERRYHAAKSLGWPEIECKILN
RPDKEIYKLAVIENLQRENLSPYEEVDALLFLKNAHNYTDQELGDLFGKS
RSYMTEVLSITSMSKTDLEKCKKNEIHNKNLLVQAAQAAKKGSLDEFLTL
YHKGALKTVKDAKDFNKQTKSGVVPNSKPSPLSGYKIRRTNHGIQIQSED
EILLGDIYKFIRKELSKKYGDSA
>LBF_2891 RNA polymerase sigma subunit
MIEDPHSSLLEDCLKGKTKALEGLIQFFQPKIFSLALKFLWNPEDAEDAT
QEILVKVITNLGGFRRDSKLSTWIYKIASNHLINVKKSKIEMKQIHFRSI
REELHKTQSPYPIQASIDTQTLTEEESTSKVSHMVLHVQVACTYAMLQGL
TRKYRMAYILGDVFSISSEEGGMVMGVRPDSFRQLLSRARNQMEVFLGRE
CNLTNRNNPCQCKNRIRYATKVGRIKSYLNLSEQMKKDGRWNEIKPLLPE
TIKIRKAAEIFRNQPTFLPKKNQLESIRTLLDNSFPFSAR
>LBF_0690 Serine phosphatase RsbU, regulator of sigma subunit
MDPHHPHWVFHLSTNWFNIAFLNSQVSPVWPPEGVGLSSLLLLGPVALPG
IYLGATLANFYNNPHFQTAFIIGIGNTLSSYVNYRIIKRVTEKTDPLYST
KDLIYFLSIGTFPGSLISAVMGVTSLWYWDFLSSELYFNVFFTWFSGEML
GFLIVAPLLYVWFYPKSKLNLELSKQLELFLWIVIVYISGSIAFSDEWPL
LFVPIPFVIVTSIRFRQFGATLSTVVLSFIAVTLTIEGKGVFARRDASGL
SINDSLIFLDAFLFCISGIAYFLVTATRERERAQETSLKSLQVLNELKEQ
ANEELEQKVLERTAVIEEQRIEIEKQLDMAKRIQESLFPQKEIIPNGVEI
LFKNIPMMKVGGDLYDIVWRHDKQELGVFICDVSGHGIPAALLSALVKTS
LEKWKEDPSDLKESLESIRNQIIPNLREHFVTASFVHLHTESGALTFARA
GHFPLFIIRKSGALVSLKPMGRIITPIFDILAEEEKFQLEKGDLIVMLTD
GLTEARDPSSLQMFGEDKLLHLVRELRNQPLVQIQDEVFQSVIHLSGGIQ
AIQDDLTLGLIRYTGVS
>LBF_0411 Transcriptional regulator, ArsR family
MPNHSKALTMEKKAEIFAALGDPTRLSLVEKLTDKEPYSISSLSKDAEIS
RQAITKHLTVLEDVGLVSKLKQGRERLYVLNPKPIKALQEYLNIISKEWD
SSLSRLKMFVENSK
>LBF_2320 Transcriptional regulator
MEERNYTKGLLEALLFLSSDPIKLSALAKSCGIEKTEARELLDELILDYQ
EREGGFLLREIAGGYQFITNQKYSEILSHIFKDKKRETLSRGTLDTLAII
AYKQPITLTELDEIRGVSSRAMVASLMSKKLVKAVGQKEVPGRPTLYGTT
NEFLLHFGLSKLTDLPTPVEVKELKFEDFSPDSIIVTDETEMNPDFDLDS
LPEELKEEKINE
>LBF_2770 Transcriptional regulator, ArsR family
MALNKKSEFPESIQSFASYAKLLSHPARIAIMEVLATRQTCVCGEIVEIL
PLAQSTVSQHLKELKEGGLVKGTVEGTSSCYCIDWENFNQMSDEFSKCIN
GIKEYQKENGSCC
>LBF_2334 Transcriptional regulator, AcrR-family
MAKKIKSKLGRPKKGQTQINRSLVLDLAWDTIQKVGFSDFRLSTLAEVLG
IRTPSLYNHVTDINDIFREMKKRALRLLGDRLEAVSKLTVGNSGRISQFL
KTYRGFSKDFPHMYPLVIVSTELDPELKVLGDRILQLSLDAFQMANLDKE
NIHKIRIIRSFVHGFIDLEREGGFGRKESIEESFQKLTESLETGKLW
>LBF_2729 Transcriptional regulator, AraC family
MNLIPIVGAVVSFLLAISYWIESIQKEIGKNKNYFQLVFHDSPPIFLFLS
VTVLLLHIYCELTNQIHSIPFFYGIHVPSIFLIGPLSYLFFEEMSGETFF
KIRFLHFIPSIWCLFLVYSFKPDGYQLSTLTSDHPNLKSFTDWINFLLGF
GVVSILIYILMILVRVLRWKLQSKGKIESSFHPFLFLLIYSLFVIVLFVL
AQLAFMDLFLPACFAFTLLLVTLLIVRMNFRDYLGHFKAEIRDARYKESR
LKGVDIPMVLQRMEELMKLDRLYLNDRLTLTSLAKRLEINTHQLSEILNT
KLGCSFRNYINQFRLLEAEKMLLEKREMTILNIIYASGFNSKSSFHKLFQ
DRYGVSPQIYRSKSK
>LBF_2197 transcription regulator, SoxR-related
MLIGEIVKKTGISRDTIRFYEKEGLFKNCLIIRKDNNYKEYSSDVLEQLQ
LIHTLRKLNFSLSEINNLTRIRNPNLLDCNDLSKSLNKNIEIIDAQINSL
LKLKEDLMKVESACSPNCNFIDKKPSCLSC
>LBF_0770 Transcriptional regulator, marR family
MSKVKSSKEEVLLLKNQICFSMYSSMHRLMKLYRPLLADLGLTYPQYLVM
LVMWEEKISTVSKIGDKLQLDSGTLTPLLKRLEQMELLDRMRNPNDERSV
NIVLSKKGKSLRDKAKLIPEKIFCLSGIEETQANQLKVILDHIGY
>LBF_0854 Transcriptional regulator, AcrR-family
MPQTLRSQTNPKGLKRIPKREETKQKIYRTALVLFQRDGYEVTTMRRIAK
EAKVSLGLTYYHFQSKEDLVLEFYKGSQKELKRLCESYFKTTKDFKTRYK
FIITTQLDLFFSHKKFLQVLARHAGDPNDPLSPFSIESEGLREEAVGIIR
QAMATSNSKLREDLSKVLPDLLWMQQMGILFYWLTDASKSFQNTKLMIHD
SLDLTFKLIKLSNFPLFKNVMGPIFRMVRLVKT
>LBF_1488 RNA binding protein
MKLSIGNLPQTLTDEALEKLLSAHGKVTHLQIKRDKLTKVSLGYGTAEMA
DADAEKAIASLNGKELEGKKIVVVNQEELTKAQNEAQKKKGSPAVAKPTF
GRNQTSGGGNTGVQRRGGSRGS
>LBF_1988 Transcriptional regulator
MKENFQYNDHHLKLLQLLEENPHLSQRDASDVLGLSLGKVNYILKAFLDK
GLIKMNNFRNNKNKLAYTYLLTPQGIEEKARMTLHFYEIKKREYEELRAE
VEKLGESVEGLG
>LBF_1390 Transcriptional regulator, AraC family
MMEYQTYPPHRDLSSIIKCYWTLEVETSENNGKQIIVPDGCIEMAFLLGD
GIKRFTSDDRYVIQPSAMVIGQITKPFAIEPLGYVNTFAVRFYPYGFSAI
HSIGMEKLKDKETDLFELFGTRISTELSKQIREANDTKERIHIIENFLLD
QFKEKSNQERVVQMAFDTLNKSQGSASIRSIGKLDSSKIRDLERKFLKQV
GVSPKQLGKIIRLQTALRLMLDENDKTLTQIAYDSDYYDQSHFIKDFKQV
TGLNPSDLFGDKSFLLSTIFYKKE
>LBF_2270 Receiver component of a two-component response regulator
MTPKKKVLLVEDHAVTRVGVKHVVNASNDFEVVGEAEHSSQIANLLQETR
PDFVLLDLRIPGENVLNMVKDWKKDLPQLKVVTLTMLDEQPIVHSAIEAG
VDGYLLKSDDLSSLTRNLNEIASGKTVYSKNLKLSFNRKPQDGKVANKKE
KQILTLLGQGKTYQEIGTDIGLSKRTVEYHVGRLKDRFNAKTVAELIGRA
KEQMLI
>LBF_1034 RNA polymerase sigma subunit
MNDLESFLEWKPYLFSIAYRITGSYVDAEDILQESYLRWLSVNKNIVENP
KSYLGSIVARLAFDLLKKASRKKETYIGPYLPEPIPEKWDGLDEVDEEKM
NFVFLVLLETLNPFERAVLLLRESFDFDFETIGKIIGKTPEYSRKILSRA
KQALKQRKKKFDPDPKFHAKLLMEFSLACAKQDTNSLSKLLKEDVIAYSD
GGGKVHAARIPIPGLSRVITFLKQTTKKAMNTSTVYFGYANGDPMIIGYD
KDGVPKFVQLISVEGNLISNIYTVANPEKLKGFQNMDQLKKLGYIRKPNL
ISFLILDFQNKIKAFLN
>LBF_2082 Superfamily II DNA and RNA helicase
MKFNELPFHESLSKALDKIGYVELTPIQAKSIPFAMEGNDLTGLAQTGTG
KTMAFLLPTLHRLLSAEEEEALPYALVLAPTRELTIQIAEEAKKLLEFTD
LGVATIIGGTDYKSQEQALGNKACIIVATPGRLIDFVKNHGLSLENIKVV
ILDEADRMFDMGFVQDLKYIFHKCKNRKQSLLFSATLSYEVVRLASKYLN
DPIEVHINPEKVITERIDQSLLHLGREEKLPYLVNSLLNYPIEGLGIIFT
NYKMNIPKIVSALRRFGITATGLSSELDQKKRIRLLRDFKAGKYKYLIAT
DVASRGIDIENIDVVYNYDLPQDAENYVHRIGRTARAGRKGQSIGFCSET
DYTELERIEKYLNSKIPVAEIREEYLEFPKGEFTPVFADEVIPGEKKYQD
RERGGRGGKPRQGERGERGSGEHRSGDRNRHKGKTGGGHPPAKMSHPGGH
PHQTGPEHKHPAKMTHHELKHGHQPKEGKGKPHNRKNEQKKSFQKNDPRR
NLFDINEVKQSKKQKQSIWKSILSFFKKD
>LBF_2898 Transcriptional regulator, AcrR-family
MSRAQVIERSPKKRAVLEKDKLSKRTSIIQAAATLLQKKDWAELSMDEVA
KRAKIAKGTLYLYFPTKEDLCLRIHSADYESWFMDLNEFLINTPKMNADI
FSNWFVNSMDRHSRFLKLLPIVPTILEKNASIQTIREFKTNLKNQITSVL
PLIIQYFPFLTEQSGFLFLMQCHALAVGSWSHGFPSNQVKEAVKDTELEM
FVLDYKKFLEISILNLLKGHSSPQTQTI
>LBF_3322 DNA/RNA helicase Superfamily II
MMDIPTQLSLDFETTVEPKQSNEYGFLIDEPELGLAKVTKETPTSVELFF
ESKEIFRTVNKSNRNLHFLNQYPESLRVSEEFPKAMELALTASQLKLTYN
FNKLSSLSNSRTRLLPHQIESTFIVANSLKPRFILADEVGLGKTIEAGLA
VKELMFRRGLKRVLVVAPSPLLVQWQQEMKNKFNEEFAIVRRRNFVTNGP
DHWRNFNKIITSIDFIKNPRYAEEILGTKWDIVVFDEAHRLRRDYSKITR
GYLFAEKIARKTECLLLLTATPFRGKLEELFYLMHLVDPNILGPYHTFIN
DYVVGQKGDLKEKISKVLLRRRKVEVGGFTKRFAKTVRIDLSPIERAFYD
ETTEYVKREYNMAMGTKNRAIGFVMVVFQKLLDSSVIALLSALQKRKFML
ESKFHYMKEHETNLDDWDLDETEGVEDFITELEDEEMSSFQRIKRELFTL
NRLIHLGKQIKEDKKTQKLRETLYRLKKEGHKKFIIFTQFRTTQDHLQSV
LEPDFKVSPFHGSLSMDEKEVAIQKFKEDYEILICTEAGGEGRNLQFANI
LFNYDLPWSPLKIEQRIGRIHRFGQKDNVYIFNFASKDTVAERILEVLTN
KIRLFEESIGASDDLLGTIEEELDFNSSLMKFITGTKTKEELETEFDLRI
QVAQKGFEKLNALVTPKVLDFNLKDYYDHTLEEREWNNQHLEEVVSEGSK
FFQNKLPGSLAVTGKGSYEYKNLEGKVKKATFDSDLALTNDSLEFMAFGH
PFVEKVTELLTHSNVGRKKKYLYSQNLSQKILFVFQVEFDFSLKRKDLFF
IEFDLKKKKSLVVTEKPKEWTEGKTYVPETEIPLSKLEEAFIHCFPIVES
EAEIKKEILRKETLSIFQKEEYKVELSHQKTIRQLEEKLMRQEAAYKWDN
RPEKKAVLHKTMKEIQRAKDEYTVEMRKIKNGAKIFHRIQLFQTYICI
>LBF_3180 Serine phosphatase RsbU, regulator of sigma subunit
MKEVKSYKFILIKIQFVLFLISILSFQSCFDLHSENNQESQLQQSVYLID
RYYYWSEEEILDPESILQEKWIPIPSKSLGFKKKEKEYLYLKFSDQFIRQ
LQSPILYSEIALERFKVFQGKEIVYQSDVSDFIYPHLIPLNSDPKGSIYI
QFQSIYEGYIGIDHDVIFKNHSQALIDLFMENFSKTFFAPILLVLSFIFM
GFYFLRRKEMIFLNFSILLLSASLIEALNGFVGFSLRQYAYYIVPLTFLN
FTFFPFALLLFLISVFPPFFRNLFKFIATLHVIVFFVSIFRNYENGISFL
NSEEGYNWIVVLEAFVAIFASVYVFMKGNRKLREIIIGILIIVVAGLHDT
LVDLEVIHQQIRIIHYGFFLMLGFFGYYVFKHYLELLHSINRMNAELRTK
NKELQRLIQIDKDLALAHALQKSLLSSKYNEDDKIRIIGFSQNLESVGGD
YFDHTKDSMGNWAFLIADVSGHGISSAMVAAMSKMAFVGAGPYLQFPARV
FHLMNRHLVGKTKNLFITASYLFIDTESYTITFSNAGHPSFFLIRNSEKE
VQQLTAKGKPLGLFSHQAYAEETINIQPKDKILLYTDGIFDLLNAEGESF
GEERLKSLLWEYRFHSLQDLSSILQDTLFRFSNGWRHQMDDLSFLMVEIK
>LBF_4098 RNA polymerase sigma subunit
MKTNREEDLILIEKARTGDRRALETLLKGVQSWIYNVIRRILLNPEEAED
ATQEVLFKLATNLAAYDPNRASFKTWTYRITVNYALNAKRGKLEELTTGF
SSYANELKQMPDIEVPTDELSNPENKILVEEAKASCTLGMLLCLDREQRI
SLLMADIMGLSDKESAEIIGISHDAFRKRLSRARQDLYKFMDDKCGLINT
SNPCRCSKKMKSFQNHGWIDAKNPRFSAPHVQRVKEQIKNLECEDEDFQR
REYQEIFRDHPYFETPSKILEELLVKYSPTY
>LBF_2653 Hypothetical protein
MDILFFKPPAHLQTYVKEFWVWREVTANQLPWILPSYECEMVFHLGDPPI
VETESGETFPLPKSHLVGPQTRRWRVLSESKLTLVSIRFYVAGFFSLFSK
NGMEIKNQFLEIASNNCLDHIFQNPILEEKKLIECLSEYLQNYPGSPSEI
PAYLRFALFALTNPKTNINPLAQKLGISRKQLERKFQEVVGLNPSEYRSV
HRVLSLVRNPEHYQTNNPDLRLTDLAQIFEYTDQSHFNHDFKRNSGSIPK
EWFAEYEKMSHFYKQNTADE
>LBF_3018 RNA-binding protein
MSVNIYVGNLSYDMTEGKLSELFGAHGAVTSAKIITDQYSGRSKGFGFIE
MKDGKEADNAIKDLNGKNILNREMKVNIAKPKTNNWR
>LBF_4138 RNA polymerase sigma subunit
MSDNLVSMSQIYERSHKRIFDFLYKYTQNADTAMDLMQDSFLSFHKHYGN
AGLSEEKSIMVLYTIARNLSINYAKKFSTSREIASDEIEFHSHNPKLETK
AEYQDLEDRLYSFLGELSEEERSALLLKNVEGFQLVQIAEVLGVSVSTAS
RLVIKATEKVLAIAKRENLVPD
>LBF_0355 Acetyltransferase
MKIRQANYLDISKLAELFDLYRQFYGQQSNLTEASRYLLNRMEHGQSIVF
LVEDPKTGNFLGFTQLYPVFSSISMQRSYILNDLYVRSENRKQGIAKLLL
DEAKSFTKHFQGKGLELSTASLNKDARSLYEKQGFVQETEFLTYFWKST
>LBF_3305 Hypothetical protein
MEKVNHFRNYRERKNLTRIQLSEKLNIPRSAIELLESEEWLRSKFDYVVL
VAKELGLSLIDLIRNEFDYDLEREFFNEEEFEEIVARYANARVTLILSEL
KLFCRNAKVRLDDFDVTELSFSMGSLHKLITLNQKLERGEISTKDALVEF
PPKWGKFSNRSN
>LBF_3164 Response regulator
MSQKKALIVDDSTVTRLMIRKIISEEYPNWEILEAESADKAKSILPDHPD
IDLFSLDQNMPGTLSGLDLVENLKSNYPKSKIVLITANIQDAIKNKAKDL
GILFIEKPITRDKLIPLLETI
>LBF_1027 Serine phosphatase RsbU, regulator of sigma subunit
MTDPQTSLSKFRSLLHISSILNANLDLHQLLPLIMLYSKDLLEAEASSLF
LLENDEFLYCEVALGEKGEIIQEYARLEFGEGIVGMVAKEKKPIALEDAY
KDPRFNPSMDKRTGFKTKSLICVPLFVEERLIGTLEVINKTNDRIFNDAD
LEYLISLSEVAATAIQNANTKDSLDKRILELSLLYEFEKLSVSEKSLNEL
GKWMLNRVLEYLGASSGTIYLANTTQQELGILAAKGIPEDAYDQIKVPFG
KGVSGWVAEKKESLLIHNLDMDPRYNQLSPFRFESKSLISAPLIYQNELL
GVISINNKLSGYAFQHSDLDLLTNIAARLSNTIKNAQLFHQIVDTGKELN
RAKNIMQKIMPSVLPETKELSYGVSHIPLEQVGGDFYDVTEIDEFQYSIL
IADISGHGLSAAVLAAMSHMVLKNFEPDIKLSPSLFLTTLNHMLFGKLAG
NFLTAFYGIINLKENSILCANAGHHAPFLMKGTSADASALDVKGKILGLI
PDLYYEEKKFSFGSGDRLVLYTDGITEHMSKDHNKRYDDELFQKAIIKGK
SKSAQDCANSLIQEAKDYVNSNEFADDVTILIVDRK
>LBF_0593 Transcription Regulator
MKRESKTQYALLGILSQCEMNGYEIRKYIESTISFFWSESFGQIYPTLSK
LEEDGFIKEWEKTDTNGKKKKVFKVTRSGLEEFRRWMDQSPIQSNKRNEL
LFKVFFGRHMNPKLLVEQLDSEIKKQKDDLKTLKVFQKELKTDWDNHPDN
EYWNLTLEYAEKQTHLNLEWIQKVKGKIQEKQ
>LBF_2130 SoxR-related transcriptional regulator
MHIGEFSRICKISKESIRYYEKEGLLKGSRKENNYRVYSKKDIRVVELIN
SLKNSGFTLFEIRSFLNLYDSDSKCKEVQIKLENKLLIIKDRISELISIQ
EKLNKSILECEDNPNKKFCNIVSSSHL
>LBF_5042 Transcriptional regulator, AcrR-family
MKEKITNQALRMLKKEGLKSLSMRKLAEHLSIDPMTIYYYFKNKDQLMAE
LVEVVFRKFYESLRLDEGIGNENPQKKLEFVLIEYRSFFIQYLDLSLYLI
QSPRQEYPAVTMFNDRILDLILALKPYENPELTRDILVDFIHGNALSVSK
GARTRSNVIANQNLTDQFKESFKILFNRLFYNTRLA
>LBF_2712 Transcriptional regulator, AraC family
MLGSILISAGLIQSIFLGFYFGLQEKSKNISSRYLGFFFLFLAMFMACNL
VYFTGNIIEYPHLMKVGYLFGFCIAPSFSVSVVRYFGIPKEKAIWNPIYL
IVPILFLLYETPFYLSNAEDKIKILSDIATNDFFSELNIIQMMILGYSFF
IFLRLYFRFQIEMKHFAKDIHWEGKIFYQYLLYLIIWLLFCILVCVILPG
KISETISNLGISIWILGFAWHRIYLDKNIMNHLQIQKQDPSKYQKSYIPE
KQMLELGKHLETIVNNKDYLFNGDLNLANIANTLGLSNHSTSQVCNRFFG
KSLIDVIQEKRIEHAKIALLDTKKTVLRIGFDVGFNSKNSFIRAFKEVTK
LTPTEYRNQNKS
>LBF_0296 Serine phosphatase RsbU, regulator of sigma subunit
MRILYLFILSGSLFSCSRWEIQKSISDESFVPQKIDYVIHAGDDVNFQKL
RWTPIFKNNLSLGFQTEHVYLKIKATNQTSVNKLILDLGNPHLDFIRVYE
EGNPEPISEGGDFIAHSHWDAFSKSIAFELNWPSGETKTLILETKSSSNI
SYLIRFYSKETFYLKENLENTILGFFYGTIFIMVIYNLFIYFILKEKAYI
TYSISIFCNLLLQMYLNGILNQVFTLDHPEIHNRIGSIIVTCSAITGWTF
AQQTLNLREFNPWSNRLIQSLKYLVLFYILIPYAYLPIDIAVRIGNFIAQ
LFVVSVLVVALVNYSTGNKQARLFLFGWITLLFGILMYTLMQNGILPVNV
FTIYGNQIGSTLEAGILSLALANKINELKEEKANTQAEALVTLEEKVRER
TKTLDESLNLIKKDLNVAKKIQKTLFSDIKTSDPRIHFHSYYQSMSEVGG
DFYDLTQVKADYYRIFVADATGHGIQAALITMAIKAEYESLKMIYDHPDD
LVFHMNQIFINKYSNIQTIFTCSVCDIDLKNKQLFYASAGHPDQIHQRIH
DIKLLPRTGKIIGLMDHTQYRLIEHQIEEGDRIFLFTDGIFEQFNEEKEL
FGEDRLYEILKENLKLSLDHTMAKVLSELSLFTDGQAKQDDITFIGCEIQ
SLS
>LBF_2408 Transcriptional regulator, AcrR-family
MVAKKQKGKPKKIPRVGRPNKLNSVNVREALIQAGVALLETTSLEEISLR
KVAAKAGVSHVASYHHFENKHALFSEIAEIGFQKYFATYQLELEKTEKDF
KGRYRALGWTYFQFIMNNRQFARIMFGGMGVESNLHPTLSSVSRRTYRQL
HEIIRMGQNLGYLEKGQTREKTLASWAMIHGIAMLFLEGRLQMKNDLNEM
EKFIQTVTEYAYNGMKS
>LBF_2095 RNA polymerase sigma subunit
MSRPLEGKNMTLREKEKILLQKIKAGDPTAYMTLVSPFRERLFRKAVSMV
KDGDDAEDIVQDALISGYKSIQNFRAEAGVYTWLYRIVVNKSKDLLAKKK
RGREKPMDDSGDNQFVDSRVGYEKKLELSEESSYLMSKIALLEDSYKQVL
ELRYFENLSYNEIAEIMECNVGTVKSRLFKAKEFLKHLIQKDEKGEGFFE
K
>LBF_1190 Transcriptional regulator, ArsR family
MAVKVKSPSEKRKETAIEALNLVLDSKFLTALAEPSRIEVLKQVIRHGKA
DISELSEGLSLDRSVISRHLLTLQEAGILVRDKQGKHVYYQLEPNQAIQK
FKAILNHLEEMVAICCPPSN
>LBF_2172 SoxR-related transcriptional regulator
MHIGEFSRICKISKESIRYYEKEGLLKGSRKENNYRVYSKKDIRVVELIN
SLKNSGFTLFEIRSFLNLYDSDSKCKEVQIKLENKLLIIKDRISELISIQ
EKLNKSILECEDNPNKKFCNIVSSSHL
>LBF_2836 Transcriptional regulator, AraC family
METESITLNVLLEFLWMGSGAIFCIIWSLSNLVNNRKKSDFVWSFILFST
GLWLLTGAFMFTGFYLYFPLIVFIHIPFVFLSASFLYYYLEFLFLEKQIK
FHWIGFLPTVIAIVLLIPYYLESNEERIHILQSLQSSEYGSVLSGLNFGI
KLSILLSVGVFLIREWIPNVMLSVFFTKRAIYSLIFILLVWLDLLIGSIG
FSFQLPFFRKLSAYLLPILMYFYYFTRELWEPFVSDVRDNIQKNKYEKSK
LVSVPLEIIDQKLYELMQEKVFCDEDLNLSKLAEMVGVKSGQLSEYFHKR
YGFGFYHYINQYRIEEAKRYLLEPTERTILSIADSVGFNSKSTFNRVFLE
KVGITPTDFRKQSKQTKS
>LBF_2182 Transcriptional regulator
MNQTVNISFEKALLKEIDKIAKREHRSRSELIREAARAYIEKKSKWQAIF
DFGVKSSEKSNLTENDIFAEIKNVRRSKKAS
>LBF_5001 ParB-like protein
MKNKTNFNPADILSKASNRTSSLNPFLSSENAAQHQTIDIPIDLIITENN
PRKTFNETSIRELADSISQYGLLQPIVVRKKAGKYELINGERRYRAHKLL
KSKTIPAVVKNVEQIDITKLPEIKLVENLQREDLSESDLALSLQELKNRH
KETNEQLAKRISKSAQWVKTKIAHAEILKETSLNSNVDKSHPIYQIPTSL
FTEIAPLDVSNRKKAIDYLIKGLEKKGDFPSRNDLREYVRPLKPTKQTKA
KPKLSQLELKDLKSKLAKIKEKISVLQNEKAILEETIRKYKK
>LBF_0912 RNA polymerase sigma subunit
MSRLLDKYNQFDETDLWKQYRVKKDAEIRSYLVEKYSPLVKHVAGRIAIG
MPQNVEFEDLVSYGVFGLLDAIEKFDPSREIKFKTYAMTRIRGSIFDELR
SVDWIPRSIRQKAKQLENIIAMLENKEGKKVDDEEIAKELGVSMEEYNSL
LAKLSGTSLVSLNDIWFLGDENDEVSFMETLESPMNMNPDNIIEKEEIKN
VIVEAIQSLPEKEKKVIVLYYYEDLTLKEIGEVLEVTESRISQLHTKAVA
RLRSKLSKVKSAIQKR
>LBF_2698 Transcriptional regulator, marR family
MGKNFELENSYAYLIYRTVRALRKQFMRLAMEQGFELFPEQWFVLVKIIK
QPGCSQSDLGRDFDDRPSMARALRNMEQKLWIRIVPDPEDRRKHKVYPTK
MGIEIFNTMVPEIEKERTRMYKKLTKEDFKDFKRIIDEIFDQSIG
>LBF_2714 RNA-binding protein
MSTNIYVGNLSYEMTETKLNELFSVHGAVSSAKIITDQYTGGSKGFGFIE
MKDRNEADKAISDLNGKNILNREMKVNIAKPKTNNWN
>LBF_0202 Acetyltransferase
MENVEIKKLTSSDLEQFLELIRVFEDVFEMKEFQMPKSNYLQTLLERDDF
FVFVSVLEGKVVAGLTAYLLRQYYSERPLVYIYDLAVQSHLQRKGIGKSL
IASINSYCKEKGMEEVFVQADLADDYALDFYKATGGRPEDVVHFYYPL
>LBF_2786 Transcriptional regulator, ArsR family
MQTLDSTFSALADPTRRAILMLLAKKDLTVMELAKPFNMSQPAISKHLKV
LEQAGLVSTTIRAQERPRRLETAPLKTAIDWIETYRQIWEKRYLALDGLL
EELQTMQTKGKGKRKK
>LBF_1496 Response regulator with CheY-like receiver and HD-GYP domain
MIQNTKPKILVIDDEATNLQILNEILKNDYSLSFAKDANKGWELAFSESP
DLILLDVMMPEKTGYDLIKQLKENKKTQFIPVIFVTALTDVGDEEKGFHL
GAVDYITKPVSPAIVKARVKTHLSLVDSTEVKITRLQIIQRLGMASEYKD
NETGMHVIRMSHYSKTLALAIGFSAEGADEILNAAPMHDVGKIGIPDSII
QKPGKLTEEEWNIMKRHPEIGAEIIGDHHSRLLKLAKSIALTHHEKYDGS
GYPYQLKGENIPLEGRIISIADVFDALTTIRPYKKAWEVEDALGYLQKES
GTHFDPKLVNEFLKVLPKILEIKAEWPEEIQKK
>LBF_1323 Transcriptional regulator
MDPMKIEIFKQTTRQYFETALLMHETIASHVGLSGTDHKYLGYLIENGEM
TAGELAKLSGLTTGAITGVIDRLEKNKLVKRKFLQSDRRKVIIVPNLEKA
NQLFSPIFKKLQKETDLLISSFTSRELEVVHRYFESAIGIMDKMSKNLKE
WNDI
>LBF_0315 Serine phosphatase RsbU, regulator of sigma subunit
MYERENNLSIHTNPFPEILDDTTYNRILKDPNYWISQSLEDKIIQQISLS
LDISGILYHVGTEALITNAYDLLPLDDSRIDLVEMIHRLPILIGRLTRAV
YLNVKPISDQHFKFVFVYLPEYQEKWYDAVFFQGMLNGLALLFELKEFQI
RMTKTKLFGIHVSHKELGEGIQFGSDANEYELEWSDDNLYLSRSHLTKEN
VSSRHRVMVTSRSETELEEMSIVDVRDVVGKSRELAIENRDLEAAVEVLK
SFKQELEKKQHSMAKDLRLAKNIQKGLIPEIIPDWNGIQFWTGFSPMQEV
SGDYYDYFPYQTDKLGVAVCDVSGHGVPAAFITALSKMLFSNFKKPKPSE
TFKLINRELLDLVKQQGYTTCVYLLIHSDYKVSYSIAGHPRPILFRHQTG
KAEVCEGDGTFLGMFPDAGDTYRDFYLQLEPGDKLFLYTDGLTEAENDHG
HAFGETKLIQLIEENANASIQETVELIMNHHREFTMGTDAMDDITLLGLQ
LSPKLEEFNVIKSEGDKAYHSKDYPSAVVSYEKAHQILPRELNTQLNYGK
ALAYSGDFEKAISMLESYNKFKTNHFKSHAILGYCYYQMEQYEKAELEWK
KAYSINDSNLSNLYNLAQLYRKLNQKQKMKDVIDKMKHIEFTYLHILPLE
KKWESLPNEIN
>LBF_2372 Transcription activator, AraC family
MPKNGNVSVDPLAKFPLKERKFARTRTNLTFGLLEFMESRSYDEIKITEL
CQYAEISEPTFYHYFPEKDDLILHYIQIWSLMVSVFAKKNRMAESGYGLI
LSLFRYTANESKKNPKILLEIISFQAKKKRKLQFKSLTDAERILLFPNHN
GIETLPIGGIEMLLEKAMYLSKKNKELPNHTNWKHLSLAIASCFFGIPIL
AFQLNENLEKLWLETLNYIWLGAGGSIPKFSKKGVKV
>LBF_4038 Transcriptional regulator, AcrR-family
MGVSERKKREFAQRESDILNCAIELFRTKHPSLVKMDDIAKHLEIGRGTI
YLHFKSKDDLMARIQYEDYVRLRARLEKAFEEKTAIEMSRRAIRAYIEHC
LGDKHMYVVAKQCGVNLNIENVSDDLRKMLIDERSNRLSLLEKIYKQAKN
ENLINSRGTYPNVAVAWGMIRGAVEVILDGHFQNEIKSEKAYLETIEHVL
FFGLFSGGNKGET
>LBF_3118 Serine phosphatase RsbU, regulator of sigma subunit
MRELAITILSSLLFFLILFFSVIGVQNSSKRLPFYHYPSGLIVNIGEENK
SHWGNSILTSDLEKFDSIQDFSNINSYRLNIQSSNGTIYQEDFKLKNVRK
TDVLGVFFSDLFLAFFSLAIAVYFYYSTRDALIFGFFFNFGLIILSNVFV
LAFKNSIFLFILTLYLGSFLQYHLIYRLRGKEINSKWLLPQVLISFIMAM
IASQERYDMILIERIAIVAHAITVLFGSINIIANVFELIRSKPQGEALLK
RLLLVFSIILYVALPSSILFFDGYPWFYVHRSFFIFTYLLFILSFFYGTY
RYTFVPSFVIFTPSIVTLILVGIILGTYIGAIFVLDYILPIRYLKDRWVF
NFIFLFLVTAYLIPLKLKVKEFFDLWFFEKNHKLSAGINKITALLSSPLS
MRKTILTINRTVKETVNVSNLIILIPGDQFANTDLRNIDFMRISPQSEIW
NYFKSTDRVTVTSHLEYGIGLRETLYNFLKGLQVQLAFPAYDSSSNKKNI
QAMILIGEKLDKKYFSIGELKFINEVVKISGMLLENYSLLEDEIQKRKIV
RDIQTASIVDNTLRLILPSEVKGIDYGYISKPAVGISGDYLDIIPVSNTK
MIVLLGDVAGHGLGTGFLVSAIKGIVREQLRNGTSLEGLFREINSFFRAR
YKGNEFMTLLGGIFDSTENVFKYVNAGHLSLIEMRADGQIKLHSKTQRVL
GILETDYHVQELKLLPGTKLFLYSDGISEAFSERDEIFGEDTLIDFLHYN
ADKSVKELPPLLDIRMTQFRGNREQSDDITFIGLSFTPN
>LBF_0863 Transcriptional regulator, AcrR-family
MAGKKQNGTKESNSYHHGDLRPALITAARTILQNQDTDALSLRSIASAIG
VSHMAPYAHFKGKEELLQAVAGSGYEELANNMLLVQQKHPKVRGRMLAFH
YGVEYIQFAMTNPNLYRLMMNQIDSEKKSNQAASNKDMMMSSQRPFRLLF
SAFASERVRKELAHARALGAWATVHGIASLAIEGHLILPKGMDVIQLFQT
TVSSTINWEQKNG
>LBF_0804 Transcriptional regulator, AcrR-family
MQTPKEHTRKEILQAAREEFIQLGFEKASMRTIAKKAKVSTSNIYNYFEN
KEHLLTEILQPVLSGLEKAFAYVSHPDYFEKRFNDSYEAWKERFHIALNY
VDANRDDFILLLTKAQGSHLEEFPDTVLTRLTKINFEQYNNFKQKNPGYK
GEVDEFVVRNILSFFLNIFVQMVRQGISKQDMLVYQDSFLKFLHFGYKGS
IASDLS
>LBF_4225 Response regulator
MKNILVIEDDPDIGNLIRKSLDSAHYTTSVFENGEDGLKFYKSNHPDLVI
LDLSLPDIDGMEICRSIRKSDESTPIFILSARTEEIDRIMGLELGADDYI
TKPFSVRELKTRVDVFFRRWDKKIGIKPNVGQAGEIIRGALKIDSIRRRV
TLNENIINISRKEFDILQLLAGSPGKVFSREMILESVWGVEWDGFERMID
SHIKRIRSKLEKNSAQPEWIETIWGIGYRFTDNFENIVVPD
>LBF_1401 Transcriptional regulator, MocR-family
MEKTKYQQLASDLKKEIESGYYSENEKIPSLREIQSLKSCSLSTAKEAYR
ILEEEGYLYAQNKSGYYVQKQISSVIFGPQNQFYESVEADDRIQQIMNTV
MDPKLLSFGAAIPSETYLPIQELNTAFKRAFLHKDIFSYGDLQGNPNLRE
WIAKRTSLFGYRVISKQIQITSGCTEAITYSLFAVTEPGDTVIVPSPIYV
GLFQILETLKLKVVEIPYRSGEGINSTEFEKLIKRHKPKVFLFAANFNNP
NGILFSDQTKQNLANISYQYGIHLVEDDIYGDLYFDGSRPKPLVSFFPEG
KNGPRSFLCSSFSKTLSPGLRIGWVSSKTGISALSKISRAFKIAENHPTQ
ICILEFLKRQTYERHLKYLRREYKSLCQDYIQLLVKESEGNIKITKPDGG
FVLWIESALDGDKLLLDAKKMGIAIAPGSLFGLSKHWNQFFRLNVSVGSS
PKIREKLSLFAKRFLKK
>LBF_3038 Transcriptional regulator, AcrR family
MGDIILHMYNQKDRISETYENLIQTFHDLFVSTAYEKISIEQIAKRAGMT
RVNFYHYFVDKEDILYRTYLFFYRKMESETPKIDPITLLADGRSLTFYGL
ENVKSNRQFYKMLFQESIPASVTYRILDFMSEESFRTHEPLRKRYKVEFP
PYQFVNQYLAGAFWNLIRNLVISDSDYDSELVSQFFKKMATEGLRSFLDS
GIQSQI
>LBF_2931 Transcriptional regulator, AcrR-family
MLDAHHKQRRIRNSLSREEIRDVSLLILKEEGLDGLSMRKIANRLGCSVA
SPYSYYESQIDLVKDLIRTGEDELLSMLKKASSEVETGSAFDQLAAIARA
YFQFASNNRELHKVMFVTDYGGVHRKAFPQLPKSYRFFLETVRIGFDSGE
IPYPKNEYPAIARMMWSWMYGVIVLDMTGMLRKRKGAGNPIEEGISYFKK
LLNKQPT
>LBF_2558 Serine phosphatase RsbU, regulator of sigma subunit
MGTEEKPTVDLSFLIKEMKKVEFGSGDLVIEQYTLGDSFYFIEKGCVEVW
KYLDETKQEILVIGDLVAGDYFGEISLIDSAPRTVNITTKENSILYKLTR
EDFHRLIQTSPEMTLTLLKLLTARIRNAEQRENQVLIQKNKELRLQNETL
EMMVKERTAKLTQSLKIIQEDLETAKTIQRNILPLGLKHIAHLDFASKFE
PMAEVGGDIFDVIRLDKSKIRLFLADAIGHGVQAALITMAIKAEYDHLKH
NTQNPSDVLVALNQIFINRYGKKSNQFTAVIVDLKLEENTLVYSSAGHNE
PYLLNQTEILPLNESGLMLGLEKDVEYSNTLVPFGLGDRLFMISDGYLEQ
ENEKGILLGESKLLSSFHSARSLGISLADTVHYLMEEFHTFRGNTPMMDD
VTILGIGTSYELGV
>LBF_0386 Transcriptional regulator
MEREKGIPTKGVLRQKKTQTFTKQNRYFPKKSLQFFIEHYWSVEWNLPTN
EMFVAETLPYPSVHLVFENRNSKVYGVHQKKFSICLQGKGSVFGVKFRPG
GFFPFYKKTISSLTNLAIPIQSLALPSNIDILKIESKICRTNNVKDRIII
IENWFDQIKPIRDSKIDTINHIIDDIKSDVSITKVDQISKLHTIQIRTLQ
RLFLEYVGVSPKWVILQFRMQEILERLEKEQMIHFADFSNEFGFFDQAHF
NRMFKKFIGFTPEKYLESLK
>LBF_2884 Conserved hypothetical protein
MTKVNPDFLGFLGAPAQRALFHELGITKLEDLSRYSKQDLLRLHGFGPSS
LPKLESELRKLGIQLKT
>LBF_0933 TenA-related transcription activator
MQSPFPIPTFALECKTFAKDSFGASFTHPFVLALAKGTLDPKVFRFYQIQ
DAKYLESFSDACAILSTKVSDPDDKLWLIDAARMALVVEGQLHIGYGKTL
GYDANTIANTEPTPNNWAYQNHMVATVMKGSVLEGFCAIAPCPWLYIELG
QHLLQEMGSIPQDHPYASWLNMYSDPGFNEYMTHLLARVQKYADLADETS
KARAKMVFQQSCNYEWMFWEQAWTNQNWPSR
>LBF_1826 RNA-binding protein
MVSNKIYVGNLKFSLKEENIRQIFSVYGAIQDLKMIHDRETGNFRGFAFI
TYASPSEAEEAVAQMNGQPIDGRNLKVTFAEDKRKEKQN
>LBF_0546 Serine phosphatase RsbU, regulator of sigma subunit
MKKEIVYPGPWMNEESEFERICLLCTEPRVPSGITKAGRFFCQTCQREWI
LEKRKIPRVGKHVLNSDEKTEFLLENLSLFNSSLGLDDLMFRFSELISDR
LKKDKIAIFITNLELGEIKLAHYYTKQKHLQRVIKRITLDYDLSYGILIE
AMAKREPCFYKFSDQTHPFYSFYSKLTGTKSQLVLPILYANIAVGMITID
YEDEDTLDYIEDEEILKIVVGQFAVSLRNSLLFSKSKNQSKHFRSLHTAA
LTLSQLYLNNHNEMIRMILLTLSGIVDSSISCLVEIPPNVTKAKVFKVYR
DLENYELKTLTDSVDINDLNFILQTKEILAVDPSIDVIFQTLGITGKETL
IVPVKLENETICIFILAKEETRFPHEEIEALNAFVSLARITMENSNLYQN
LSNKERLEKEIEIAKEIQSNLLPRNAPEADGFSFGGLMVPARGIGGDYYD
FILSPNRNELFVCIGDVSGKGVAAGLVMATVRTILHSLVRVKDSPWEILN
DINNYLYSSYRDAITPRFMSMILIRWNLISDEVEVSGAGHGNFYHYQLYS
NTVRSIETGGVILGISPDISKFKNETKLYFKAGDTILLYTDGVTEALNAY
EKQYGELSLEESFRNHILLEPKKILENIYLDLKEFVKEQEQHDDITMVAV
RKI
>LBF_0604 Response regulator
METRKVRILFLVFYVLSLLVWIIEEIYTLSKPPEYFDRFRVLIATIESFI
ALSSFLVVFILYKELKKEAVENRQAKTQIHDLKRTNRILINPEKGFWAEA
KAQMTDWNLTDVETEIAILLLRGFSQKQIAAVRKKSLRTIENQTASIYEK
SSMRGKLEFISFFLTPLLPEED
>LBF_4052 RNA polymerase sigma subunit
MTSFDFETVVKETKYLVLKTIGDTLIDRFDDATEDVVQEVYFRVFKSLEK
GGFDGRSKISTWIYTIAKNESLRMNEKRLREEEKAKRYLQKNKSDLFQTD
ENHSILKEDWINSLLQSIPEVYRQTLRLYLSGKSMEEISNELKIKQGTVK
SRLFRTKEWIRKTLPGVKNEFQES
>LBF_2387 Serine phosphatase RsbU, regulator of sigma subunit
MLMKQILIFLFFSFSISAEVVSLDSRWTFQSEGEKFPKQIKVGVLLIEQG
YKVPLRGKYHLILPIDQLPETSISVYLDRVHSADNTYWNGKLIGTTGGLS
PNYYPYWHKVRYYEIPNSLVLLGENHLEVEIECRETEFRCGLFRSIPLFG
SQNEIKDKMIYEDVNQIVMAALFFGIFLQQAIGYALNRSSKSGLYLAGTA
IFFVCWRLPVLNKIHFLGIHPEILVRLLFFCQFIFPVFIMLFVHTLIDRK
ITKIAFITFLFDTILALIQLFELNPDVRFYFVYIWYILLGIKVPILVQLL
AKNYKKSSEAIVVSIGALVATFFGIADVLTDVITGKNAYLTQYGILSFLF
SGVLAIALQSSRTKKELRNLNESLEMIVTLRTQELQKQYKLLHDDLVMAA
SLQSKLIPPMEFQYARLNVASMFMPMEKIGGDYFDYYIHEDGSLTFLLCD
VLGHGIAAALIASMLKVNFLEIAPKIKDPSLFLKEINLKILPVIEKNYIT
AVASHFDLKNQILRYSVMGHPSPFHLNLKDNSLETLGGRGPIMGWKKEVQ
LDTYKIPLRTGDRFFFYTDGITESHSREKEMFGETRLRNQLLEGNALSPK
ELNEKIKKEIKKFTFRLSDDVTYFTIDFL
>LBF_2922 Transcriptional regulator, AcrR-family
MNHTLNPRKVPQQKRSKERYQKIVDTAIMLLGEVGYDDLTTDLIAEKSGI
SVGSIYQFFPNKESIIYSHAEACYLIMHDLFFEKVSKALKKTKKFTPEFV
DFTLIAYEQTLSEVKGYRLINSILYTNEALLHLDIESNERFAKSLADKVI
LTMFPKVNQKRAFYIALMIVESVDSVTKIIHRTSKISEKKQVLAELRTLL
LVYFSSFQ
>LBF_1871 Serine phosphatase, regulator of sigma subunit
MEPKDSQHTILIVDDVPENVELLKYLLLQEGFKTYTAYSAEEARLVLLNT
SIDTLLLDVNMPEQDGFSFCRELRTMDQFKLLPILFITSIDREVGFQEAM
KNGGDDFINKPFNKRELVAKIHSVIRLKDLQDELYQQKSKYEKELQTARR
VQDQLIPEKSFIWNGIKAQTLFHPYLQIGGDFVDTWIEEKKLHIVIADCS
GHGPSAALIGAMFKMQLFNLVANMGLKERVSHLRKNMELVLPEDYAITFC
YAIIDPDLNLSYINGGHPAPIIYLDGETKLLKGMSPMIMGINMITNDEVQ
SVSLKQGSKFFMYTDGASEAMNANMEYITEEGMRDIFHESVVSGGDILPT
VQNKILEFCGVSTPSDDMAMVCIQL
>LBF_0732 Transcriptional regulator
MDAFFRTFYFMGNVMIHLIAFSAGLAFLFAIGEFLRTNSSRQTKVQGLLF
LFAAFFQTHTYLTATELYQVYPHFYLVHLPFTACIGSLLKQYFSELWNDS
PNKNEFSYLELAPAFLVTFLMTPFYLSSAEEKIMIHQSYLKIGVPLPFQI
IILIAVLPIFYSAYYVFSQMVRYIRWDRFKKSAHLRLVGLVVGFGAFASA
IGVYTLFFHARHGLQIVSTFIGFLIIGIYLLRQKSPELWGEVQRIVIEEK
KYQTSQLGSFDLEDLHERLKLLMETKKVYLDETINLEKLAKQMNLSEHQL
SEFLNSHLKKSFFHLVNHYRIKEAKDFFIQHPEKNILTVAYEVGFPSKST
FYDAFKREVGQSPSEYRKNLKK
>LBF_2892 Transcriptional regulator, AraC-related
MDLLSDILFSAGWKNDLLSKGQIFQSFGFHFPCERSGGFHVVTQGSCYAR
IGKQIIPLQKGDLLFITRGVHHELLSDPKAKVVTIERFLHEKNNQKIDQN
PVTTFVSVRYEVPDGPVHPLLLELPDYILIPYASIQKHHSLEDFIQILSK
ELELNLGTDLIVQRLTDIMLYYMIRIWLQQEENSPVGWIKAFHDKTVLYA
LEKLHNAFSKEWTIESLAKETGVSRANLANKFRDVLGIPPMEYLAKLRME
KAKQLFQKGNMGLEEIAQNVGYASAFSFSKAYKRIYGNSPSREWKRVI
>LBF_1664 Transcriptional regulator
MNNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGAQDPTEKFKSSCAK
YLKTSVDKLFNDSAVEDIYPEFSNGLKNKLWAVRRELGIKQYDFAKKLKV
STPFLSKVELGLLEPPEDFKNLVSKVLKMEKNELFLG
>LBF_5004 Transcriptional regulator, AcrR-family
MRKNTYHHGDLKNSIIKSCHKLLQKKGMTDFSLREVAHLSGVSHAAVYRH
FQHKDEVLEILSAIGFDRLASLQKKVAKDKKNPDEYFVKLGLVYIQFALK
NPNYYKLMFQTKREKESKDLKRSKLKSYAVLVHGCRFFLKAKKRKENHRS
FALMSWSLVHGFSNLSLETNFPISEGKRLNQTQIELAETMLRFAT
>LBF_3231 Transcriptional regulator, ArsR family
MVKLLESEETLNATFQALADPTRRKILMQLVSGEATVLELAEPFQMSLPG
ISKHIKVLERAGLIERGKSAQFRPCRLKVEALAEANQWLEQYKQLWEERF
DRLDQYLMELQQSKGKEKNV
>LBF_3307 Transcriptional regulator, AcrR-family
MNPSLLFGKGEFIDFYVDRSIINSANGFVGKKGFDTKQKMIEVMASLLEE
EGYERAGLSELGKETGTPKGSLYFHFPGGKDELTSLAILYSGKQLNDFFL
SVFGNCDSPQQAIKQVFHALEERIVTSNFQKGCPIATTAMETAGKTTIVS
DACKDVYALWIKTFETYLVGSGYTSRLAKTLSLSIFALWEGSLLLSKLQK
SAEPLRMAEKTAESLLKQT
>LBF_0100 Transcriptional regulator, AcrR-family
MVEKASKLNKSEEILTAALELFTAKGFDGTAVPLIAERANVAAGTIYRYF
ASKEELVNSLFQKWQESLYNKIKDNFPENVEPKEQFHRIWLSMAEFQREN
PIAFDFLEMQYNLPYLDKKSLAKRALLLKFLTRFAHDNRDILIKFPPDAL
IAIVWGAFVGLVKGSRNGKIKLDDQFLKESEDLLWNAIKLPN
>LBF_1690 Regulator of sigma subunit
MNKSKIKTTNSLRFKIGLFYSLLAFLNIIFFTVMIFENQSDLLLKNFQFQ
SENLANTILTDIQSIGLSRERDEGFEVFRKTLKLYEISKFSIFDSEGQII
HLEPEVEKNGDPIEESVLKKTKEVSSDKEGNLFKARYSLELNESDFTVNF
LLPIRLSDGKEVFLYTHFNISSIQDRLKQLYIQVGYAVIWGVLFHIIFAI
LVYRAIFKRVGDLEIASKDMATGNLESRVNWKFKSEDELDSLGKSFNQMA
EEIQNKVTTITRLNQEINQELQIGKEVQELFLPSVKKFKKFNIGKLYRPM
REVSGDLYQYFQVPEQNFYGFFLADASGHGVSAALVTVVMAMSLQAIMKE
SPSPIHAINSLGEVIANRLQASFFATGVFVVFDEPGVVKFVNAGHNAPFI
IRPSTKEVRFIDSSGPPLGMGDDIQYSLDSFPVEPGDKIILYTDGVVETP
IKEGGLFGLERFTEIVLENIHLTNAEIVEKAMTLLEEKHEEYKDDVTMLV
LDVPE
>LBF_1402 Transcriptional regulator, MocR family
MESNLTNLFLAKRTKHIRSSLIREILKITVKDSEFLSFAGGLPNPNLIER
ELLQKATEKTLISSAESALQYGDSTGVSELKQLILDTFVGMEGCDTNSIC
ITHGSQQGLDILGKLFMEEDTNVLLEDPVYLGALQAFSPYQPKFFSLALE
ADGPSLSKLREILSSRRIHCFYTNPSYQNPSTITWTVEKRIAVAELLDEY
EVILFEDEAYQFLDFSGTVYPSIASFRKNKDLTFVLGSFSKIISPGFRLG
WVVVPNVYLEMFTRIKQGNDLNSNQFSQIVLLNLLSRFDFKEHCSKIQSY
YHKQKQHLVDCLARYLPEVRFQNPQGGMFLWVEYPNVSEKEMMQHLMEKK
VVMVPGNEFRLLDSDSAYFRMNFSFLQTVDMEEGVKRIASVYRDIIT
>LBF_3262 Transcriptional regulator
MTENPDSTRGKLLISNSSVIQDFFHKSVVLMVDHDDDGAFGLVLNKPTDQ
TMESLIKNLPDTVHSNKPVYAGGPVDNLFVSILHNGKQTADPGVEVVPGI
YMARSFDTMLEVLSSDQIQFRVLQGYAGWSSGQLESEFDRLSWVVSDLVD
DSIVFKEDESEVIWKEALRSKGGIYKYFVDHTKDPSLN
>LBF_2359 Transcriptional regulator, AcrR-family
MVPSEKIDTSQETMLTRLPLRIRKKKKTEETILLVAKQLFRERGYARVTV
PEIADEANVSVKTVFNYFGSKEELAFREEVQFCDQLILHILSRKQNQSIF
DAFQNFIWTLIQSIDPDQLIESLPGFHPWMDDPALEQRYLLLWENYEKRI
TDALQLEFGKNEFDPVLRMIACQMVSILKTLGSKDFKVYLTPIPGALRYR
ALEKWTLRSLDLVSGIRNHLSN
>LBF_1179 Transcriptional regulator,  LysR family
MEFRQIVYFLEIANTGTFQKAATQLGLTQPALSRQIFLLEKELGVIVLER
GGRSVRLTHEGEKFYQYSIRMKELWEEIQNGFAKENELKGNFSISAGGTV
SAWILPQILKEILTKRKGLSLSVREGDASETKNSVLKGEVDLGILTGPIA
EPSLNVIEFLSDQIYPVATKDHPIFLKKKIRIEDLKKQSVVFFHPGSALR
KAVEKKIKSFSKEFGPNITMELRSVESVIKSLEAGLGIGFLSKYSMNQKL
QKINFEDWNVERKFYLCYRKKSGPGLTMLAEEILRSTELWKSKKENSSLS
>LBF_2544 Transcriptional regulator, AraC family
MVCVKPKPNLYPVWKQIEEQLEKEIGLNQIAFLTGYSDWHFHRFFKSVQK
ENIKTYIKRLRLEKAAYELKISNFPILEIGMEAGFSSHEAFTKAFKRVIG
ITPSEFRKKHQIKMKDLSLSQLSLPSGLTKHSFQKKTISPFSILFIRHLG
SYQLLPGPIPNSKEMIQLKTLFSKWDLLEFHHKWIGISQDDPDVTCKDNI
RFDLGFTISEKFPSPPDGFGKQTIPGGNYLQIRYTGDYENLPMIYDWILN
QYCIVSKLKLKNNPPWECYLNPFEPIPDKRITDIYIPLE
>LBF_0856 Acetyltransferase
MVRDLLESDRNQTIELVNQFFRKVNELELDGLFRIRPRAATKFTDIYFKL
IGTGKVYMRGYFVEEELVSLLIGRVEEKPHLEEERSLFIDLAVTKLGKKK
KGYMSELLKDVDLWCFEKKIPAIELRAILKNEEAIQFWNKSSFEPFYIRY
RKRVNGT
>LBF_2449 Receiver component of a two-component response regulator
MDRKKSITVGILENDEFFLNEVKERLKSIPEIDSVLTWESAENFFKDPAI
ESLDILFLDIMLSGMTGIDVVGKMNESGSKIKVIMLTNMSSDEMIFNSIK
NGALGYILKSDIGRIREIIEVVKGGGATITPTIALRVFSSFRKVKTNEEE
SLTDRETQILQLLVKGKKISSIAELLLLSEHTVHGYVKSIYKKLMVHNRV
ELTLKAQKLSLL
>LBF_4166 Serine phosphatase RsbU, regulator of sigma subunit
MPTKLLTLSLISDITSRINSQEDLNTLLSEIMGITRDVLQTEGSSLLLYD
KENDQLVFNTTSGLKEESLAHLTVPRGKGIAGMVLETLKPEIVNDAANDP
RIFKAIDQKVGYVTRNLICVPMVAQGEVQGVLEAVNSLDNRDFNQTDIKI
LRYLSNLAAIAVKNRLLIDNLNLRANELNCLFQISQALANIQSSDEFMDL
AVKTISEVLQVDRVCLNFEKIEKRGLPRSKSKGFSDQIHDEDVVALLFND
RSDWMYKGFKIITASSPQGMQLTHKGLFQHSMILFPILKNKEWLGSLVVS
DKTSRTRFDEMDIRILRTLTNQVGEAYTALQVKIQSERLKNIDRDMQVAA
MIQKHSLPIIPKQYSLLEFDTYYQASREIGGDFYDMVVHGKDEVSVIIAD
VSGKGTPAALFMEFSKTVLQQEVSKTTSTSEALFNANEILQDKSGFLMFV
TAMLVRINMTKKELTYSSAGHNLQIIYRKKHHKIQHLSGKGQPMGIGKCE
FSEHTVSYLPGDLLVLYTDGVTEAMNLKEELFSEERLESVILSHINDPPE
VIRQAILQKVSEFVGEAEPHDDLSLFIIRLN
>LBF_1493 Transcriptional regulator
MSVQKKRSDCPISSSLDIWGDKWSLLIIRDLMHQKQCTYGDFLKSKEGIA
TNILATRLQMLEENGLIQKKEHPENKTKVLYQLTDKGIDLLPVLIEIQIW
AESYFEIPKEIKERIKPFKKDKETVIKKAMKEMKREGST
>LBF_0068 Transcriptional regulator
MGTKFKGSKKEVQALDSFIKLKRASESLSSRLISEFTKWNISESQFGVLE
TLYHLGPLCQKDLGDKILKSTGNITLVIDNLEKRSLVERVRGVEDRRFIS
VHLTTEGKKLIEQIFPDHVKRITSEFSVLSPEEQDVLGKICKKLGKKNEP
TAK
>LBF_5022 Response regulator
MTKPCILSDFCRMSEFLGSWLQFGAWYHFVLGIGILVKEKGSKGFPFAMI
AAFSGGTLIIYAYRLFAGFEFEFSLLNHGYVPIIYLIPGSMQYTIEQFLS
TEPVSIGRLQRLYPTFLVMILLIGLQIFYPQVLEQSMNESFTGLPFSIPE
YLALLGCLYWVISFVWMIYQYRNILYRNPNEEAKLGVRVLGMILKGNITF
ASFILVSTVFRWNSGIYFTAGLATLMAVIAFIGTEINHQLFKDILPGLRQ
SYRTSRILNLNLEKLQQDLDHLLKQEFVYREETINLSNLSERLGIKDYQL
SEYINAYLGMNFNRLVNEYRIAEVCKLIEENPKVNLLSLAYQVGFNSKAN
FNVAFKSLKKMSPSEYAKSIAKSK
>LBF_2594 Transcriptional regulator
MATKKLNEKTKEPKFKVGDYVVYPIHGVGEVTEVAKKLILGKKKDCYSLE
IQGSKMKVSIPVDRAMDVGIRSIIDKKEIKKVLTLLKKDEVDTEEDWKVR
YQNNMNKIKSGSIFEVADVCRNLYRRAYGKELSIMERKLYESAYNLVKME
IALSKGVPQEEAGNIVSDVLAASVQGIAPPPPPKELDDDLDLE
>LBF_2161 transcriptional regulator
MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGEL
IVGIKDNSDEPNPEKRWDGFSSIEDLNGLLQTLFNISPSLDLKYTILTCP
SFKGYVIQINIERTAELHKTLDGEVYLRSGAQSIHIKDPQKIVELSYSKG
TTTFEDQTLPEIPPEQITDAEEIKLFLKSFSPKTDALDFCVNQNLFTYKE
WFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPEREHLLNQETIDA
PLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRD
YSISDDVHVLIYNNRIEILSPGKLPGYVTTSNILDARYARNPKIVRTLHR
YPDPPNKDMGEGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPA
ESILKYLNNNPEITNKEVRELTGIKSENLVKAEFYKLRKAGFLERVPEKN
SNKSAWKLTEAGRIESQKYS
>LBF_0286 Transcriptional regulator, AcrR-family
MRAAEDVFAEFGFSGATTAELAKEAGVTERTLFKYFPTKHDLYKRVLSGL
LLQTILPGHMSDLKERIQNLDPNFKEWYTSILKARYEAVAKDPKKLKLLL
GALLFSKEFAEIFGQMWKVNLYDTSMEAFRYFQKKGEIRNDLDPNQIVRA
SFSLGASFLITKFILAPKFPIDVDLEIQSIISIFYQGISNQK
>LBF_2266 greA, greA transcription elongation factor-related protein
MPETITEDKSNKIADNDKLTPLFNEEIYVRADAGTVPVSKFKIFDDVIDA
YKAENRLAEAKQKIEDHFKEHPESISAKYMLMIISFMEDSMGDANLVKNI
LDSFKAHAKWTIIEYITDSILRFGDHRLALRVKAEALDKLKKNKELKVVL
EKLAKQDRKNPEIAKKYGFSIMEEDKPKAMSYLKLAVEMYAKNKEYVPME
EIWPTIVQNNYEDVSFFDKIERILLGQREKTRLVGLLYPIVEPFKAMEDW
DHVIYFLKKILEHEPASQKARNELIRSYKQKYVAHSLLEDFLKMSELGNN
RKPVKLCITNFERNIVFDTGNYVMHRNWGVGKITSISQTGDSIFVDFEEK
KDHKLSIQMAITSLKPLKKDHIWVQHFEDRQGINTMFAENLPEFLKQLLK
SYDNRMIIGDMKNELIGTFLKQEEWSKWWAKVKSVLKKEANIGMNPKKKD
EVVYHEKPITHSETLTQKFQASNDANKKLEIAMEAVRDSDEAAEAGEFFI
SHYVEEESARDIIRKISAYLYLEEAGKAWPTEEFSHKIREPELKTLIQTL
TKEDALKISKALENTDIKKGFKDLIRSHHPEAINILIGLLFEVPVKVNRS
VFQNLVADEKYAELNLFFETVCNKSKENPEVFLWVAKSILSHTWKFDWLK
VSEEDLVLRVFRILKPLAKIEDKGTKLKNQAMDILFGKDNSLLRDILTNA
DDEYVRKLFALFKEVPYVTDLEKDQLYALINELKPNIVWDEYDSEEDADD
DPLANLPHDVVLVTRRAFNAKKLEFEHLVNVEMAENSRDIGEAQEKGDLR
ENAEYKAAMEKQAQLQAAIKRLEAELKSARILDLSDVKTEKVGIGTTVRL
KNKQTGESVTYSILGAWDADTEKNIISYQSPLAKSLLGKHTGNEATLVFG
STETVYEVLDIARYSMTGQEA
>LBF_2700 greA-1, Transcription elongation factor
MKTKKKISITNLDYIRLKKMILEYSKRNKTDANVQDLLGEIERAQKVDSK
QIPSNVVTMNSVIEIKNLEGIEFKEFRLVYPEDSNLDQNQISILAPIATA
SIGYKTGDVIFWNVPDGVYRFQITEIKYQPEANGDFHL
>LBF_3267 hrcA, Heat-inducible transcriptional repressor, HrcA
MDLSPRHRSILKALVEEFVSDNKPVGSKTLSEKYDIGLSPATIRSCLAEL
EDMGFIVARHTSGGRVPTERGYRLYVDSLVTLFELTMREKQRIQEEYLRM
QFRLDQVLIATSKVLASLSQSASVVLGPEGSLDTLKHIELIHVNGGEVLM
ILVMRSGTVLNRNIFFDFHISQETLYQISRYLNDNVKGFDVHEIQSNLIP
QMMLKKEGPEGFTLFAPSIARAMGTDSHSVDNLYIDGLKNLYENFKDEEE
QLENILHLFDEKQFLKEFFSDYVPMDGVYTIIGKDGNEKLGGVTIITTNY
RMGEKRIGSMGIIGPQRMNYNKALPLIEFTSKLVSEMITKLSR
>LBF_1262 lexA, Repressor lexA
MKDLTEKQEFVLQYISDTVREKGFPPTIREIGDQFGITAKGAYDHLKAIE
KKGYIRTSKNQSRAIELLKGNADEALLVRASGIPLLGQVAAGAPILAEEN
IEEYIAVPDDLATKPGTFALRVKGDSMVEAGISDGDIAIIQKKDTARNGE
IVVALIENEATLKVFFKEPDMIRLEPRNAKLKPIRTKKATIIGKLIGLYR
IY
>LBF_1770 mfd, Transcription-repair coupling factor
MTKDIQIRPFQAKDVFKEAKETLVNLSGIPESAHSFVTSTLYGNKLTKKT
FVVVLPTNQEAESFCRELLSFLNKEEIYFFPGPENIPYEYTKWQVEWKRD
RILTINQILAGNRSLVVTSVAAFLRKLPEKESLKGKSITLKLGVDFPLEA
LLVELIQLGYHREEVCEQFGHFSLKGGILDIYTPYLTNPVRIDFFGDTVD
EIRTFDPNTQKSIQKIDEVLITAANETIVTKSELEHYHNLLNEYSEKRLP
IDSEIEIIEEHLPLVRKQEGFLDFFPEPPVLIFPKFQETKERSFGMEREY
NTLFEKKKEESLCLPPTELLSFGMEWKSLTSEETPGIQFSLLPSLLNNFS
FDPITEVKGFRGKIREAKEYFLELLALNPGHSIFITSSFSAQMMRLKGLF
SETEVNTIGENSEDPIRFPFESIQPGIHLILSDLKRGFHLVNEGIFVFTD
NDLFGRQYKRKTRYKKQSSQMIESFIDLKEGDYVVHVNHGVGRFVKIERT
KADGKERDFLKLEYAGGDSLFVPLDQISLVQKYIGGTDSPKLDTLGKNSW
KKAKERVQESVDKLAEELVLLYSNRLKLNGFAFPPDTIWQEEFEAAFEFE
ETPDQISAIEAVKLDLESSRPMDRLVCGDVGYGKTEVAIRAAFKVIMAGK
QVMLLTPTTILSLQHFNTFKQRYENYPIKIAFVSRFRSPAEIREDLKNFT
EGKIDMLIGTHAILSSKVKPKNLGLLIIDEEQKFGVTHKESIKKFKNLVD
VLTLTATPIPRTLHMALTGIRELSIISTAPKNRQSVETYVLEEDDTLIQE
AIRKEIERGGQVFYLYNRVESIEEEASYVRSLVPEVSVGILHGQLTEDEI
EETLVEFYERKYDILVTTTIIESGIDMPNVNTLIVKKADMFGLSQLYQIR
GRVGRSDRKAYAYMFYPSKKLMTELAEKRLNTIFEYQELGSGFKVAMRDL
EIRGAGNLLGKEQSGDIMEVGFDLYVKMLEESISRIKGEEVRVEVRTAVN
LKTNFYLPDDYIPDTKQKIEFYKRFEGSANLDEIEELALEMEDRFGELPQ
IANTFVELEKIRTLASNLGFEFVTEKPEEILFKCGTYFRGNPDRVIQAMA
QFKGLLISPSEPSVLRYTNLEKDDLKKIKKLLAILEFLAA
>LBF_1471 nusA, Transcription elongation factor
MATKQATKETGLFEAIQQFCQDKSLDRELVLGVIRDSLLAAYRKKVGLEA
ETDDRCQVEFGSDNKNEIIISVLRDVVAEKTINPLEVSLEDAQKIDPKIE
VGSQIRVFEKPQDLSRVLSSQAKQMVFQRLRDMEKELLYQEYKSKEGELT
HGYFQRWKKDIMSIDLGKVEGIMLKKDQNPGEKYRQGDRLKAIISRVELR
PREPMPVITLSRASGDFVKKLFEMEIPEVYDGIVEIRDVARIPSYRTKVV
VTTSKSDVDPVGACVGMKGVRIQAIVRELGNERIDIVLHSDEPSIFIANA
ISPAKPVEVHVDRKRGDALVIVPDESLSLAIGINGSNVKLVSQLSGFKID
IKTVSQYNQELASPEAREKLDRLFNAQQEAMEESEDGYNQSGQDEEEEDS
GFTPLSEIPGLTPRIVGLLEAGGIKNVETLLEFSQEELSKISGIGKTTAE
QILRLLRESIEWVEEG
>LBF_2085 nusB, Transcription antitermination protein
MSSRHRGRSLALMCLYQIDLVGTDPDRAMKFDWYDKKITREEKDYAVFLV
KGVVENRKAIDTLIKKYSENWELSRISVVNRCILRLSILSLQKEPFLAAP
VVINEAVELTKEFETEESAQFINGLLDAFYKKEILPKEPH
>LBF_1925 nusG, Transcription antiterminator
MGDSLDKKWYVLQTYSGHENKVKTNIEKMVQQQKLEDQIFSVKIPSMEVA
EMKNGKKKVTKKKLMPGYVLVEMNMTDDLRFKIQNLPSVSTFVGGKGKGP
EPLSLDEIKNLFSDVGNVESEEVSRPRFLFKVGETLKIIDGPFANFTGLV
DEIFPDKGRLRVRVEIFGRSTPVELDYLQVKSEQ
>LBF_0354 paiB, PaiB transcriptional regulator
MYIPEPFQMESSSVFQFVKENSFGILVSELEGSMVATHLPLLLSPDHQFL
IGHFAKPNPQKASMNQEVLCIFPGPHCYISPSWYETNRSVPTWNYTAVHI
KGILTYMQDPIQIKESLELLVKTFEASESTYQLSEVNQDYLMGLQNGIVP
FQIQITHWEGKTKLSQNHSVERRKRVIENLERMPGDNEKAIANLMKQSLD
QKS
>LBF_0998 rho, Transcription termination factor Rho
MASRKQEEIQVNPPEEPTEYTNGIMDQDDAQEPPKQFKKKKNRYEGPIPP
PLDLVELKKKNINELADLAKGLGVENTHGLKKQNLMFALLQAQTEKDGQV
HAAGVMERLPDGYGFLRSPDYNYVPGPDDIYVSPSQIKLFGLRTGDTVTG
LIRPPKEAERFFAMLRVESINGFPVEVAQKRNLFDNLTPLYPSERINMEF
DPSHLDTRVIDLMCPIGKGQRALIVAPPRTGKTVLMQSIANAITRNHPEI
FLIVLLIDERPEEVTDMARHVKGEVVSSTFDEPAQRHVQVAEMVIEKAKR
LVEHGKDVVILLDSITRLARAYNQVVPTSGKILSGGVDSNALHKPKRFFG
AARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMEIHLDRKLADK
RIFPAIDINRSGTRKEELLLPQDTLTRVFILRKVLSPMSITESMELLIEK
MRGAKTNDQFLASMNTN
>LBF_2504 rnc, Ribonuclease III
MSHSIRIKLTPERITSLQELQSITDTSFKDISLLHLAFVHRSFANEDSDR
YLSDNERLEFLGDSVLGILAAEYLYKSLPKGKEGILAKLKSKMVSAPAIA
KLARFYRFPDFLLLGKGEKEKGEANLNLQADCFEAFLGALYLDQGLNSCR
IFLTPHFQTMEKGVESAEETKDYKTILQEYCQKKWKKLPEYILLKEEGPD
HDKDFSVSVSCENYFQSNGDGKNKRRAEQMAAKAALRILKLL
>LBF_1886 rpoA, DNA-directed RNA polymerase, alpha subunit
MSPKNLLKGFKRPKKIEFTTDVNTPNYGKFVAEPFERGIGTTIGNSLRRT
LMSSIEGAAISAIRIEGVSHEFSYIEGVAEDVTRIILNLKQVRIKYEPED
KEASKVIHLELKGAGYFRAADLAVDSSIEIMNPDLHIATLNEDANLIMDL
EIQRGRGYVPAEDKKKDIEVLGTIPIDSIFSPIQKVLFEVSETRVAQRSD
YEKLTMEVWTDGSVSPEDAVAQAAKILKDHLTVFINFEEEIEEEEEELDE
ADEKLKAALSKHVEELELSVRSTNVLRSLEIDFIGELVKRSEDEMTKSKH
FSEQSLLELKAKLSSMGLSFGMRDF
>LBF_1920 rpoB, DNA-directed RNA polymerase, beta subunit
MHTRMQIRNRVNFGKITDLNLLPNLIYVQKKSFDWFLQSEVKDPTKRLNQ
GLEAVFRESFPIESPNNDMVMEYGHYVLGEPKRDPQECKDTDSSFAVPLK
AVIRLIIKDTGEIREQVVYMGDLPVMTDHGTFIINGAERVVVSQLHRSPG
IFFSYDQVRDTFSARVIPYRGSWLEFEMDNKGILVAKIDRKKNFPATLLV
KAMGMGTNEEVLRLFYGSSKMKIAGANPKDLKRLIGRRTIADIINMETGE
VMLDAGSKINEDNISILREMKVKEVDVIEFPKGKDNPVLINCLEKDGVND
YEDAVKKFHTIMRPGEPSTIENAEAELKRLFFSPKTFDLGIVGRYKINSK
FEFNNPKEFSKADDRVLRKQDIIETVRYLVMLMSEAENYYPDDIDHLGNR
RIRSVGELIANQLKLGFSRVERVIKERMTVQEPEQQTPQLLISIKPITAV
INEFFGSSQLSQFMDQTNPLAELTHKRRLNALGPGGLSRDRAGFEVRDVH
YSHYGRMCPIETPEGPNIGLILSMSSFARVNDYGFIETPYRLVKNGKVQK
QVEYLTADKEEYHYMAQSNSTVDEKGEFTSKLISTRHRGDFPFRSPAEIQ
YMDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLTEEAPFVG
TGMEARAAYDAGVCIVAKKDGVVSKVDATGVWIKEDQSKEIVHYPLIKFK
KTNQGTCFNQKPNVSMLHTTTGGKVSKVSKERVEVTTPNGEKETHELLLS
DEVQFHAVVKEGQEVGIGAPVAGQIIKGEKYGDFGQILQKGTVLANGPST
DAGYLALGRNVLVAFMPWEGYNFEDAILISERIIKDDVFSSIHIEEFEIQ
ARETKLGQEQITRDIPNLSDKAFRDLDESGVIRVGAEVKPGDILVGMVTP
KGETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGFEGTVIDIKRYSRETG
DELAAGVEEMVKVYVARKRKLLVGDKMAGRHGNKGVVARVMAQEDMPYME
DGSPVDIVLNPLGVPSRMNLGQIFETQLGFAAKKLGINFETPVFDGASEG
DVNDFCKKAGLPENSKFQLYDGRTGEKFINQVFCGYIYMLKLAHLVDDKI
HARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASHTLQELLTI
KSDDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIIKDSE
GLEVDISDYEDEFSKNKKKIKFETIENV
>LBF_1919 rpoC, DNA-directed RNA polymerase, beta subunit
MRNYNSFESITIRLASPERIKEWSFGEVKKPETINYRTLKPERDGLFCEK
IFGTTKDWECYCGKFKSIRYKGVVCDKCGVEVTHSKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLDMTINQLKSVLYFEKYVIIDPADSGRNRGELI
DEDEYHNYLDEYGDKFIAGIGGDAIKELLARIDVDAEARVIRQKIQDKNK
ISDKRIFKRLEVLEAFRDSGNRPEWMVLDVVPVIPPELRPMVQLEGGRFA
TSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVGALFDNSR
RKRTVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KYHQMGLPKKMALELFKPFIMKRLVDLELAPNIKSAKKKIEAEDKEVFDV
LETVVKEHPVLLNRAPTLHRLGIQAFLPVLVEGKAIKLHPLVCHAFNADF
DGDQMAIHVPLAPKAQLETWMLMLSPHNILNPANGQPICGPTQDIVLGIY
YLTSEVKDAKGEGKFFTGLEEVMYAIETKTVEIRSKISVLHEGKIIETTP
GRLIFNQVMPKGYVYINRTLGDKETNKIIADVYEKFGPGITVVMLDEIKR
LGYRYATVFAPTISIDDIRVSPQKEGLVNDANKEVEKADMEYRKGIITNE
ERRKKVIEIWTKTNDRITEGMFKELEKDQAGFNPVYVMAASGARGSKQQI
RQLAGMRGLMAKPSGEIIELAIRSNFREGLGVLEFFISTHGARKGLADTA
LKTADAGYLTRRLVDISQDVIVSEDDCGTKANITLGIVKEGENVIVSLAD
RVFGRYTAEDLVDPVTEKVVFPKDTLITRALGQQIENLGYDKIKVRSPLT
CRSRHGICTKCYGMDMARLVPAEIGEAVGTIAAQSIGQPGTQLTMRTFHV
GGAASATIQEKEHKVPFRSLVKSINGRLVTNANGSKVFARRGTIIVNRLI
QEFNTESLSSVRIVDGQRLEKGEVFASQVGESIEQRITSDQAGTVSLIGT
TLRILGDDIVIPVKIGTILKSEEGQIVEENKALAEFDPYNEVAVSETAGT
IVWEDLEIGKNVRRDVDPKTSNIILKVVEQKKDRLVPKVIVGSDGYSVPV
DALLQFQNGDKVREGDVIFKIPSVAEKTRDITGGLPRVDELFEARRPKDA
CTLAEIDGKIEDKGEIVKEKRILYILPDSPEQEKVKVAIPIGKQIRVRQG
DFVKRGDQLDEGNFDPHDILAIKGPSALHEYLVSEVQEVYRLQGVHINDK
HIEVVVRSMLRKVIITDSGDTSFVNQQQVDKFLFDEENDRVEQEGGSPAQ
GTPVLLGLTKASLNTESYFSAASFQETTKVLTDAAIKGKTDNLMGLKENV
IIGHMIPAGTGMKKYRDIEVFKEMPGDLDWDLDSEEEEEELSELSEAAPV
STATLSKLVAEEDEDEDELEEEADDSDDEDDDD
>LBF_1515 rpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
MENLASLPEVQKIISIGKANREVSYDEINEILPDKILNSEKIDDVFTLLH
EMGIEIVEEYSKKSLEESSSLTTTKEETTKETKEKPARKKRESSVSSSSE
DPIRLYLKEIGKVSLISGETEVFLAKRIEKGEKIIEETILSSSILRQNFA
KLIPKIKSKKIKVYDLVKVDKMYALNQEQADKLEKVFFENMELIQQDEKV
LNESTNRIRKYSENSKKFKELKEKIDLSTGKIDEAIRKIGVSQKEIQKIS
QKIKSMVFRVKEIEKHFLKIKAKYGHDVREIKALNRFIEKNENLDEIEKM
MGCDIDEVREVIKDIRNNERKLRRMEQEAGSPVGEIKDWGEKIIKGEREI
AQAKRELVRANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIRAVDKFEYK
KGYKFSTYATWWIRQAITRAISDQARTIRVPVHMIEQVNKVIRETRLFVQ
EFGRDPSNDEIAERLGWPVQKVKAVKNVAREPISLEIPVGSEEDSELGDF
IEDKEVISPLNSAASSILSEQIRQVLQTLPAREQKVIRMRFGLDDGYAQT
LEEVGYQFKVTRERIRQIEAKALRRLRHPSRSKKLKDYID
>LBF_2055 rpoE, RNA polymerase sigma subunit
MSDEIRSLIDNCLLGKREAWQTLIQKFHRLIIGTCAHYVPREEVVDTSQL
VYLKLTENDYHLLRKFKGESLPAFIIYLSEISKNISMSHTRSIRRTEYRE
GISLDLSIDILDERQTQEDVYFEWEEKQEFYDLIDALDEPHKEILILRLK
GYKFKEIAEILEVPIGTVLARANRAKEKLKKIQTKEIKP
>LBF_1600 rpoN, DNA-directed RNA polymerase sigma-54 subunit
MKLGASLSHRQTQKLVMTQDLRQSIELLSLSTLELSDKIQNELLENPLLD
ELGVDEKTKMPELFSIDEVKRLEKLNHEKSTDVNWQDSYSLEGPRTYDSE
ASDRNQKYIESSTRGETLEEHLLNQLRLIKLTKLEFEIGEVLISMIDDKG
FITDDLTLVAKEMGYPEPKLRRVLQVINELDPIGIGAKDMQETLLIQGRI
LFPENTLLHQLIGEFLSDLEKVDYKKIAKNLKITEEEILSLARLIKKLEP
YPATTYQGRKIDYVVADVVVKEVGNEFNIFINDEWLPKLTIQEEYKELLG
QKLPPKEKEYFQTKYSSAQWLIRSIQQRRQTLQRVVSCIIDFQVDFFRGG
IGFIKPLTLKEVAEKLGLHESTISRITTNKYIQTTWGIFELKWFFSSGVK
SAEGGKESSKKIHEIIRNLVKEEDEQNPLSDQDIVELMEKKGIEIARRTV
AKYRKVLRILPSNERKRISSLKG
>LBF_0517 rsbU-3, Serine phosphatase RsbU, regulator of sigma subunit
MKLQSLQDRFKLDDEVLKISRICLVVFSSFIGFGIFAPVDELGLYDPRWI
RIIHASITISFFIATYFVDWVRKNIQSIMLVFFYTMSAHSLILLYWNSLY
IGYLVGMILVLSCIGVSFVDRRSMVSYLASVTSAGILVGIYTKEHQVDLS
LYLSAIITPSLVSYLTLNIRLSSVEKLRISESQLKKFQDRMLNELELANE
TQSNLVTTDWPKTKGIKFYSFFQSFDQVGGDAISYLQREDGKMALFFADV
SGHGIASAMVSAMAVLAFKIHGNTNEPSECLKAIHDELQSLVPNNHISAC
VLFVDLETKEIKYSIAGHPPIILIQKESGPKFLEGLGTLIVSFLKPSLKN
YQITPESGDRILLYSDGILEVFDESGEIYGEEHLFSSIKNHSDKKGDDFL
NVIYEDSMSFSAKRISDDMSMLLLEIQ
>LBF_2378 rsbU-4, Serine phosphatase RsbU, regulator of sigma subunit
MKPHGKWKLVQFFKRSSILLLFGFFVNPLVSLPLSVEETNNYRDIGKYFE
YTIPKNPESTLSDLLKEDTLWRPNPKKVISFPRSKHPVWLKITLIHYGSI
PHTFFLHLSNPVVDLFELHTEINGQWRTQWSGEQVLQKNKPIYSHMSAFP
ITLSPNESRTIYLKIKSDNPIFSFVSFYNSRTFIAYSKKQDIFFAGYFGA
GFMMFFFSLFLAHTLRYKKFFYFFFYLATVLLLNTYSTGFIQYFEFGNSN
SWKNYLFPITIHLSSIFGLLFTLEFLETKAFSSILNRITISYILILTFVL
LFIFVLDLRNFIQLTVFLIIIPIFLAIFISIFTLFKSKKKLEVILFLLAF
GVLLFGAALNTFTVQGFLKPIHFASYSLPLGSALEVFFLSLALVLRVSDY
RKSNEQKQEIDLQLKIAQKLQNGLLPKKRSHALGYPLGFRYLPATDIGGD
FVEIIEKEKELGLFLCDVSGHGIPAAMIASMTKVSLEIWSDILNKPALAA
DKIRRSLLSLLSGHFLSAFFVYIQPEERILKIANAGHLPLLHLDRNGNIT
TYTSYGRAINEFVPSDIKEKSFQLPVEGTLILFTDGVIEARNVHTGELFG
EERFYQLIQALAKKHPQVICDSVIEQIEKFQKSKRSDDDITILALSLDSS
FEVSL
>LBF_1752 rsbU-7, Serine phosphatase RsbU, regulator of sigma subunit
MKTFLDKGRNVYSNFIYVIRTKSFYKLFLSLVLFIILPYSIIAGRMIYFE
YDNALDWNQRFQLIRIQLLAIDIENQIQDQLQKEFTNPKNKLESKKNSDE
IRTFCKLDSSDSKQEVFFQMVRCHFSEEEQSYFLLSDGNGYRIYPSTFIE
EALLDSPFSDPNEGLFLLNSKGDFGISGFIEDDFLVSEEWKEKTKSSLQT
NSNLPTLKEVRKDDLGFFLVGVPLYGLPIHLFVVSPINLVLQPILSTLKT
NLTTLSGILLFTFFISFFISLKEIESKQKLKLILKEFPHAAILYDSTGNV
LLENPHIEPTIQLKDVFIYQDSFVLWLKKEVLVFLKEIKDQKMEQQQLRK
EELEVFTNNGENLLLEITYQIWYLEQDHQSASGALILVQDVTKKRLEFEK
EMDYARDLQKKYLPSRIQIFPKLDYEILYRPLIQVGGDYYDYIDLGNNRY
IFALGDVIGHGVKAAMMMTVLKVLFHQIAKTEPDPSQILLKMNEGIATHF
PDPYAFVPFLFLLFDINQNFVYYGNAGHPGMVHFSKNGPECYEKLNPMFG
MLPKFSPKVLEFPITKGDRFYLFTDGLKDVENFKQEKLWENELMGFFHTM
ENNHMSFIKQELDSKIRSFSEGKDLLDDITWIGIDII
>LBF_2258 spoT, GTP pyrophosphokinase
MGLYQDIKDKQELFDAVQKRLGPEKAQLIQKAYHIADKMHEGQKRLSGEP
YIIHPMNVASVLDELGLDERAIAAGLLHDVVEDTSYTKEDMAREFGEDIA
ALVEGVTKISEIKSQSKETEAAENIRKMLLATIKDVRVMLIKLADKTHNV
RTLKFQPEEKQKRIAKEVLSLYAPIAGRLGVYKVKFELEDLAFQSLHPDE
YQEIKKRVSAKKSERDEYIEKIKIILKQRLAEINIDARIDGRAKHFYSIY
RKMVTKEKSFSEIFDLRAVRIIANEIKDCYGVLGIVHTLWTPIPGRFKDY
IATPKTNLYQSLHTTVFGPDGRPMEVQIRTKEMNAIAENGVAAHWAYKES
TNLTRSSVILQNGVENAFRMKWLEILKSWQDPSLDSKEFMEELQYDLHED
EIFVFTPKGEIIEMPKGATVLDYAFRIHTDVGLHARGGKVNGRMVTLRTE
LKSGDQVEIITEKNSKPSPIWLRIVKTSGARQKLRAYFRKLQEDSQKETI
GSVLEASNPSFDENTIKEIKKVKIKKATKPNTNQEETKEFGISVAGWNDV
PVRVASCCTPIPGDEIIGFITRGRGVSVHKKDCTTATKQLEWMKTIPVRW
EGPGEPIPIQIEVRAKDVQGIYLSMVESISSNETNILEAGASSHPNGTLT
AKFMLEVDHLDQLKEILENLRMIQGVVFAERVKK
>LBF_4201 srmB, ATP-dependent RNA helicase (superfamily II)
MTKNDTEVGNDFQSFGLRPEILQGITEAGFESPSPIQKQAIPLVLEGKDL
IAQAQTGTGKTAAYGLPCLNRIKVEDGMQVLVLTPTRELALQVSDELFKL
GKHLGIKTTTIYGGSSYSKQITQVAKGAQVAVATPGRLLDLLKGKELKNF
KPSMVILDEADEMLDMGFMDDIESIFNLLPTKRQTLLFSATMPEPIKKLA
SKYQTHPAHVKIAATEKSSKNIEQVYYIIDEAEREIAVVRILDYENPFKA
IIFTKTKKEADDLKSTLSFKGYPVEALHGDLNQKQREQVLKSLHDGRVKI
LVATDVAARGLDVKDLSLVINYHLPFDSESYTHRIGRTGRAGKSGKAVTL
VTTRESRALLRLKGTSGTNLTIAALPTKKEVHLSREEDFLKKVVDTEIHA
DAEAVLEKLLKLEDKRSIALKLLSKMLDNTKISGPEKIGKTPAEWSEMPP
GGGSGGRRRRDDGGGSGGGRGGYRGARSNSDRSERSDRGDRKERGGESSS
RRASTPASKKEGGVYVKAAGKKTQRFRNK
>LBF_0022 vacB, Exoribonuclease R
MDTYKIQRKIIEYLDQKSGKDITRQEIKKKFIESSEFKRPDPKTKKVKAF
KRKEKVPRKEIEFLIDQLCNLLEVEGLLIPNKKYLTVAKPFRLTGRISIS
RRGDGFISLPSKNEIFVPGPLTNTAISGDKVEVIPLGVGKKDRLEAEVTK
ILKRGRILYRMRVKEKTNKFVFGNFLDMLGDGKEGVLHVKSILKDSFDAI
NIDDVLIVKLKEGAEPQDNLYDVSFIRFESDTKEDGDLQRILMKYNYDPV
HPDFIPLDFPEEVTEKTVSDWNRRTDLRDLYAVTIDGITAKDFDDAISFV
DEGNRLRIWIHIADVSYYVEKGSALDKEAYERATSVYLANRVVPMLPPIL
SEDLCSLVANTNRLAFTVEMEASKSGEIYNAKFYKSIIKVKKRYTYEMAE
EEIKAQDPNNWMYQVSLFTDALRKHRMKTGRIDLNLRETTITWNERKEPI
GIENRERLTSHILIEELMLSANLKVDEFLRKKKIPTLHRIHEPMDEEKLE
TLNHFLQLNGYNVQIHDTSYPEIMKAVKEIQDNSVGKIFNYLLLRSFMQA
YYGADPLGHWGLGFKDYCHFTSPIRRYPDLIVHRVLQATLLETDKEYSEN
EIAVMGLHCSEEERRAADAERDIVKIKSFRYLESTGIKEFKGFIVGIRPS
QIFVELDISNLEGVLDKSEFTDEFEVMIKNDFSFYSKKYSKIFFIGDPVT
VSLDRIDFEEIKVFLKLKDFKKDDTPTKKK


# Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

>LEPBI_I2233 Putative transcriptional regulator, MerR family
MHIGEFSRICKISKESIRYYEKEGLLKGSRKENNYRVYSKKDIRVVELIN
SLKNSGFTLFEIRSFLNLYDSDSKCKEVQIKLENKLLIIKDRISELISIQ
EKLNKSILECEDNPNKKFCNIVSSSHL
>LEPBI_I2931 RNA polymerase ECF-type sigma factor
MDHALAKKYEQRKKLIEKKQKGHFLVRTPYREIARILGISESGVSVTLLR
VLEKIQKKMHSIAVEP
>LEPBI_I2526 Putative two-component response regulator
MDRKKSITVGILENDEFFLNEVKERLKSIPEIDSVLTWESAENFFKDPAI
ESLDILFLDIMLSGMTGIDVVGKMNESGSKIKVIMLTNMSSDEMIFNSIK
NGALGYILKSDIGRIREIIEVVKGGGATITPTIALRVFSSFRKVKTNEEE
SLTDRETQILQLLVKGKKISSIAELLLLSEHTVHGYVKSIYKKLMVHNRV
ELTLKAQKLSLL
>LEPBI_I0370 Putative transcriptional regulator, PadR family
MRINEFFSSFIKIHILHHCLKEEIYGVWMIEELREHGYKISPGSLYPLLK
HLEEKGLIRSRVEQLGKVKRKFYRITPRGKKELTSAKIKLKELIGEILN
>LEPBI_I0895 Putative transcriptional regulator, TetR family
MVMKRLYQFRVKVYSVVMAGKKQNGTKESNSYHHGDLRPALITAARTILQ
NQDTDALSLRSIASAIGVSHMAPYAHFKGKEELLQAVAGSGYEELANNML
LVQQKHPKVRGRMLAFHYGVEYIQFAMTNPNLYRLMMNQIDSEKKSNQAA
SNKDMMMSSQRPFRLLFSAFASERVRKELAHARALGAWATVHGIASLAIE
GHLILPKGMDVIQLFQTTVSSTINWEQKNG
>LEPBI_I2987 Conserved hypothetical protein
MTKVNPDFLGFLGAPAQRALFHELGITKLEDLSRYSKQDLLRLHGFGPSS
LPKLESELRKLGIQLKT
>LEPBI_I2690 Putative phosphoserine phosphatase; putative membrane protein
MKHYLRWITFLWSLVLLTCSVAEVPPVAEKGHLTAVSYLAQNNQIIPIVG
DWEYYPGMLFSPSELTEIKSIREPLYFTVPGVWTKSFLEKGFLAGDGYGT
FHVELLHGLKGIPLSIKVPEMESAYILFVDGERLASNGYVSTSYQSGIPE
YRPQIIDFIPKENQTSFLLQISNYHHRKGGPAQVIILGRTSDIHKQYEFQ
ILRDMLLVGSILFMGLYHIFLYWNRKKDPFTYWFALTCILVALRVFITGN
KYLVQVIPDLPWEIHLKLSYLSFFFITPIFAKYVYLLFKPYFSRRVYELL
KYVGYAFCCIVLLTRSSFYTYLMVPFQIFTLLGAIYTLLVLSRAIRDSQP
GSLIFLISFIVFVASFVNDILVNNLIINSPLTIHFGIFMMFFVQSIYIAR
NFSKGFVDAENLAIELSEKNQTLQKVQNQITILNERLETRVKEKTIELQS
KLDQITKDMKLAKSIIQSVTKVPEMEPHLRVDILYKPTADVGGDIFFVKR
IQDFYYRFFLGDATGHGLQAALYSMMIQSEFERVSAVAMRPNDLLFYMNQ
HFYDKNADLQIYFPALVMDFDFHQNILRYAGGGVQNQIILKKNNESLIVE
NTGPIIGILEHYRYGIFESKVESGDRIFLFTDGLFEELNEADGMQAWDDL
MQTIQSTNELPFQEIIPSIQTMLFQKMNKTTWKDDSTLIVIEIT
>LEPBI_I0305 Putative phosphoserine phosphatase; putative membrane protein
MRILYLFILSGSLFSCSRWEIQKSISDESFVPQKIDYVIHAGDDVNFQKL
RWTPIFKNNLSLGFQTEHVYLKIKATNQTSVNKLILDLGNPHLDFIRVYE
EGNPEPISEGGDFIAHSHWDAFSKSIAFELNWPSGETKTLILETKSSSNI
SYLIRFYSKETFYLKENLENTILGFFYGTIFIMVIYNLFIYFILKEKAYI
TYSISIFCNLLLQMYLNGILNQVFTLDHPEIHNRIGSIIVTCSAITGWTF
AQQTLNLREFNPWSNRLIQSLKYLVLFYILIPYAYLPIDIAVRIGNFIAQ
LFVVSVLVVALVNYSTGNKQARLFLFGWITLLFGILMYTLMQNGILPVNV
FTIYGNQIGSTLEAGILSLALANKINELKEEKANTQAEALVTLEEKVRER
TKTLDESLNLIKKDLNVAKKIQKTLFSDIKTSDPRIHFHSYYQSMSEVGG
DFYDLTQVKADYYRIFVADATGHGIQAALITMAIKAEYESLKMIYDHPDD
LVFHMNQIFINKYSNIQTIFTCSVCDIDLKNKQLFYASAGHPDQIHQRIH
DIKLLPRTGKIIGLMDHTQYRLIEHQIEEGDRIFLFTDGIFEQFNEEKEL
FGEDRLYEILKENLKLSLDHTMAKVLSELSLFTDGQAKQDDITFIGCEIQ
SLS
>LEPBI_II0237 Two-component response regulator
MKNILVIEDDPDIGNLIRKSLDSAHYTTSVFENGEDGLKFYKSNHPDLVI
LDLSLPDIDGMEICRSIRKSDESTPIFILSARTEEIDRIMGLELGADDYI
TKPFSVRELKTRVDVFFRRWDKKIGIKPNVGQAGEIIRGALKIDSIRRRV
TLNENIINISRKEFDILQLLAGSPGKVFSREMILESVWGVEWDGFERMID
SHIKRIRSKLEKNSAQPEWIETIWGIGYRFTDNFENIVVPD
>LEPBI_I2786 Putative transcription elongation factor
MKTKKKISITNLDYIRLKKMILEYSKRNKTDANVQDLLGEIERAQKVDSK
QIPSNVVTMNSVIEIKNLEGIEFKEFRLVYPEDSNLDQNQISILAPIATA
SIGYKTGDVIFWNVPDGVYRFQITEIKYQPEANGDFHL
>LEPBI_p0007 Putative transcriptional regulator
MFAKFRLTGRVMPVPQKIPNKSDNKKQLARERSTERILASAIVLFSKHGF
AQTTMEMIANHAKISKGLAYNYFKSKNQIFEQIIDSHLAKQERFYNNIPP
NLSAKEYVREFFIRSIQFAKEERKTMVLITVCLFQPSAVSLSKKMIENVE
RRFAPFKEAMRERFRAYGIKDPDKEMIFIKTFLHGVIMSQHFNDTTMCTP
TIIEMLLERYDSK
>LEPBI_II0026 Putative chromosome partitioning protein ParB
MSKKTEFQALDLISAYSEKKKNPSHLELNQIFPNPTQPRLIGREDTSDLV
PSMERLGLIEPILVRKDKGKYLIVAGERRYRAALKLGWKEIPAIITDANE
DVCYEMSLAENEKRKNLNPWEVGKAIQYLRKEKKKTADEVSVLLGYSERY
VKQLSSIARLDQKSVMELIISGKPLSVKNLEDLLKRKENRGGETISPRIG
MSQNKISINVGKLSTKVRENFLKELTSLKKKYGISD
>LEPBI_II0002 Putative chromosome partitioning protein ParB
MSLKSKRLGTLADIYQAENLDGTIRTIRMDRIQPSEHQPRQERKKGIEEL
AQTLKADGLLQPIIVSKGEKEGNYKIIAGERRYHAAKSLGWPEIECKILN
RPDKEIYKLAVIENLQRENLSPYEEVDALLFLKNAHNYTDQELGDLFGKS
RSYMTEVLSITSMSKTDLEKCKKNEIHNKNLLVQAAQAAKKGSLDEFLTL
YHKGALKTVKDAKDFNKQTKSGVVPNSKPSPLSGYKIRRTNHGIQIQSED
EILLGDIYKFIRKELSKKYGDSA
>LEPBI_I0967 Putative transcriptional activator, TenA family
MQSPFPIPTFALECKTFAKDSFGASFTHPFVLALAKGTLDPKVFRFYQIQ
DAKYLESFSDACAILSTKVSDPDDKLWLIDAARMALVVEGQLHIGYGKTL
GYDANTIANTEPTPNNWAYQNHMVATVMKGSVLEGFCAIAPCPWLYIELG
QHLLQEMGSIPQDHPYASWLNMYSDPGFNEYMTHLLARVQKYADLADETS
KARAKMVFQQSCNYEWMFWEQAWTNQNWPSR
>LEPBI_I2109 Putative RNA polymerase sigma-E factor
MSDEIRSLIDNCLLGKREAWQTLIQKFHRLIIGTCAHYVPREEVVDTSQL
VYLKLTENDYHLLRKFKGESLPAFIIYLSEISKNISMSHTRSIRRTEYRE
GISLDLSIDILDERQTQEDVYFEWEEKQEFYDLIDALDEPHKEILILRLK
GYKFKEIAEILEVPIGTVLARANRAKEKLKKIQTKEIKP
>LEPBI_I1422 Putative two-component response regulator
MKPRILLVEDDEGLGETLKERLEQDKYRVEWAKTISEAENLYRPNAFDLV
VLDLRLPDGNGFDLAEMIVKKEKDLPFLFLTAQAGAQERLRGFELGAAEF
IPKPFHLKEFLIRLERVISLTRPHYGQKWKMDTKEIHLDSFLIKNEDGTS
TLLSKRDCSLLALLLTDPAKVFSRSEILDFIVGEDSFPTERTIDNAIVRL
RDALGEGSIRNVRGVGYQWIGPLQPLV
>LEPBI_I0068 HTH-type transcriptional regulator, MarR family
MGTKFKGSKKEVQALDSFIKLKRASESLSSRLISEFTKWNISESQFGVLE
TLYHLGPLCQKDLGDKILKSTGNITLVIDNLEKRSLVERVRGVEDRRFIS
VHLTTEGKKLIEQIFPDHVKRITSEFSVLSPEEQDVLGKICKKLGKKNEP
TAK
>LEPBI_I2444 Hypothetical protein
MPKNGNVSVDPLAKFPLKERKFARTRTNLTFGLLEFMESRSYDEIKITEL
CQYAEISEPTFYHYFPEKDDLILHYIQIWSLMVSVFAKKNRMAESGYGLI
LSLFRYTANESKKNPKILLEIISFQAKKKRKLQFKSLTDAERILLFPNHN
GIETLPIGGIEMLLEKAMYLSKKNKELPNHTNWKHLSLAIASCFFGIPIL
AFQLNENLEKLWLETLNYIWLGAGGSIPKFSKKGVKV
>LEPBI_I0239 Conserved hypothetical protein
MNPSTARAASKLNLIRLLASHPEGLSLEEIQGVTGHKSIASLKKDLGELY
MIEMYPYSPTDAVDLDFDGDKVKIRLPIAVDSALPLSPKEWAALRSLLLS
EKGQGGEIRQSILKKIDSVLPSGEWSPHQKTKKMVQEAIHSKKILTIVYW
KRNTKEKETRTLAPWLLLEENDSYLLAYDLKKEGFRSFRLDFILDITITD
LEYPNLPETASEFLQGFKQKFETNSDPETNVTLWVTDSASYHLSLKLPLN
ETGNVKQIQNTTFREFQTPLRDKNWLIQTILGYGPSILVSEPNEIKESIR
LHLQSISLSKENKSIET
>LEPBI_I0207 Putative acetyltransferase
MENVEIKKLTSSDLEQFLELIRVFEDVFEMKEFQMPKSNYLQTLLERDDF
FVFVSVLEGKVVAGLTAYLLRQYYSERPLVYIYDLAVQSHLQRKGIGKSL
IASINSYCKEKGMEEVFVQADLADDYALDFYKATGGRPEDVVHFYYPL
>LEPBI_I2041 Putative transcriptional regulator
MKENFQYNDHHLKLLQLLEENPHLSQRDASDVLGLSLGKVNYILKAFLDK
GLIKMNNFRNNKNKLAYTYLLTPQGIEEKARMTLHFYEIKKREYEELRAE
VEKLGESVEGLG
>LEPBI_I2030 Hypothetical protein
MEIFLNLIVRPAIEDDCKLIFEWANEPEVRNASFHSKKIEWSEHKNWFSE
KLQNPDSIIYIFEVDGEAAGQIRFDKNGEFFEIDYSIDKKYRGNGFGNAI
VRLGITNLKSQFKESIRVVARVKEGNLISAKVFQNIGFKETKLGNGDLQF
VYE
>LEPBI_I1805 Hypothetical protein; putative membrane protein
MKTFLDKGRNVYSNFIYVIRTKSFYKLFLSLVLFIILPYSIIAGRMIYFE
YDNALDWNQRFQLIRIQLLAIDIENQIQDQLQKEFTNPKNKLESKKNSDE
IRTFCKLDSSDSKQEVFFQMVRCHFSEEEQSYFLLSDGNGYRIYPSTFIE
EALLDSPFSDPNEGLFLLNSKGDFGISGFIEDDFLVSEEWKEKTKSSLQT
NSNLPTLKEVRKDDLGFFLVGVPLYGLPIHLFVVSPINLVLQPILSTLKT
NLTTLSGILLFTFFISFFISLKEIESKQKLKLILKEFPHAAILYDSTGNV
LLENPHIEPTIQLKDVFIYQDSFVLWLKKEVLVFLKEIKDQKMEQQQLRK
EELEVFTNNGENLLLEITYQIWYLEQDHQSASGALILVQDVTKKRLEFEK
EMDYARDLQKKYLPSRIQIFPKLDYEILYRPLIQVGGDYYDYIDLGNNRY
IFALGDVIGHGVKAAMMMTVLKVLFHQIAKTEPDPSQILLKMNEGIATHF
PDPYAFVPFLFLLFDINQNFVYYGNAGHPGMVHFSKNGPECYEKLNPMFG
MLPKFSPKVLEFPITKGDRFYLFTDGLKDVENFKQEKLWENELMGFFHTM
ENNHMSFIKQELDSKIRSFSEGKDLLDDITWIGIDII
>LEPBI_I1541 Putative glycine-rich RNA binding protein
MKLSIGNLPQTLTDEALEKLLSAHGKVTHLQIKRDKLTKVSLGYGTAEMA
DADAEKAIASLNGKELEGKKIVVVNQEELTKAQNEAQKKKGSPAVAKPTF
GRNQTSGGGNTGVQRRGGSRGS
>LEPBI_I3036 Putative transcriptional regulator, TetR family
MLDAHHKQRRIRNSLSREEIRDVSLLILKEEGLDGLSMRKIANRLGCSVA
SPYSYYESQIDLVKDLIRTGEDELLSMLKKASSEVETGSAFDQLAAIARA
YFQFASNNRELHKVMFVTDYGGVHRKAFPQLPKSYRFFLETVRIGFDSGE
IPYPKNEYPAIARMMWSWMYGVIVLDMTGMLRKRKGAGNPIEEGISYFKK
LLNKQPT
>LEPBI_I1087 Putative two-component response regulator
MKILIVEDEEVAARGLERLLRELLGKKISSLHVEKSLLGSRCFLQENPID
LLFLDLNLDGDFGFDLLKESSAASFITIITSGNTAEAILAFEYGVLDFVP
KPISRERLEKALKKYFSNSGQNQTKYIGIKEDHHLKLIPTKEILYIEADD
KKVKLFQKNGKIVSHYKSLELLSKILPGNFKRIHRSYIVNQRYINQILVS
PGGSYQVELVTGIKLKMGRNYYKDLKATLYAKVS
>LEPBI_I3155 Putative regulatory protein
MESVKIAILEDHSVVTEGIISILKSNPFFSLAGEFRTAADLFEFIATNPI
DVLILDIDLPDRNGIDVLREIKEKHQPTKVIIFSLHGSRVYVEDALKSKA
DGYMLKSDPIAKLPEVIQLVMKGGSFVSDGVSKVQLPFSPFQMEILNLLV
QGLSQNEVADRIQKSRKTVEYHLNQMRTKFSCKNNNELISKYEKEIQK
>LEPBI_I3044 Hypothetical protein; putative membrane protein
MPQSSSNENRFVLSDYYKKQLKEIAFQGEFRAETFATKFRFFFLGFLVIF
ATLGLLSGRPPVEFYYQISAILVLLCYNFVVLYSLKKSGKYLNIFKFSSS
FLEITLLTFVTGYTAYSQKNPSLVYAAPMIYVFFILIALASIRNNTKTII
FAVIVLIVEYASLTIYFYPEMTDLNSKLMELSQYLKPNFLEENSSFFLVS
AVPMGIFLILLYMVVTGGLILYAILNTSRTTQEQADLIFNTEKQAILEEN
MRLGMELDVARQIQAMVLPRNEELKQIDELEISARMDSANEVGGDYYDVV
HHEDGTVYIGIGDVTDHGLASGVVMLMTQSAFITTLRSKVISLRESLRSI
NSILFSNIHVRMNDIRNLTLSLFSYKNGVFTTAGQHETIMVYRHALKKNR
DHRYCR
>LEPBI_I3422 Hypothetical protein
MEKVNHFRNYRERKNLTRIQLSEKLNIPRSAIELLESEEWLRSKFDYVVL
VAKELGLSLIDLIRNEFDYDLEREFFNEEEFEEIVARYANARVTLILSEL
KLFCRNAKVRLDDFDVTELSFSMGSLHKLITLNQKLERGEISTKDALVEF
PPKWGKFSNRSN
>LEPBI_I2639 Putative serine phosphatase
MGTEEKPTVDLSFLIKEMKKVEFGSGDLVIEQYTLGDSFYFIEKGCVEVW
KYLDETKQEILVIGDLVAGDYFGEISLIDSAPRTVNITTKENSILYKLTR
EDFHRLIQTSPEMTLTLLKLLTARIRNAEQRENQVLIQKNKELRLQNETL
EMMVKERTAKLTQSLKIIQEDLETAKTIQRNILPLGLKHIAHLDFASKFE
PMAEVGGDIFDVIRLDKSKIRLFLADAIGHGVQAALITMAIKAEYDHLKH
NTQNPSDVLVALNQIFINRYGKKSNQFTAVIVDLKLEENTLVYSSAGHNE
PYLLNQTEILPLNESGLMLGLEKDVEYSNTLVPFGLGDRLFMISDGYLEQ
ENEKGILLGESKLLSSFHSARSLGISLADTVHYLMEEFHTFRGNTPMMDD
VTILGIGTSYELGV
>LEPBI_I2450 Putative serine phosphatase RsbU regulator; putative membrane protein; putative signal peptide
MKPHGKWKLVQFFKRSSILLLFGFFVNPLVSLPLSVEETNNYRDIGKYFE
YTIPKNPESTLSDLLKEDTLWRPNPKKVISFPRSKHPVWLKITLIHYGSI
PHTFFLHLSNPVVDLFELHTEINGQWRTQWSGEQVLQKNKPIYSHMSAFP
ITLSPNESRTIYLKIKSDNPIFSFVSFYNSRTFIAYSKKQDIFFAGYFGA
GFMMFFFSLFLAHTLRYKKFFYFFFYLATVLLLNTYSTGFIQYFEFGNSN
SWKNYLFPITIHLSSIFGLLFTLEFLETKAFSSILNRITISYILILTFVL
LFIFVLDLRNFIQLTVFLIIIPIFLAIFISIFTLFKSKKKLEVILFLLAF
GVLLFGAALNTFTVQGFLKPIHFASYSLPLGSALEVFFLSLALVLRVSDY
RKSNEQKQEIDLQLKIAQKLQNGLLPKKRSHALGYPLGFRYLPATDIGGD
FVEIIEKEKELGLFLCDVSGHGIPAAMIASMTKVSLEIWSDILNKPALAA
DKIRRSLLSLLSGHFLSAFFVYIQPEERILKIANAGHLPLLHLDRNGNIT
TYTSYGRAINEFVPSDIKEKSFQLPVEGTLILFTDGVIEARNVHTGELFG
EERFYQLIQALAKKHPQVICDSVIEQIEKFQKSKRSDDDITILALSLDSS
FEVSL
>LEPBI_I2339 Putative two-component regulatory response regulator, LuxR family
MTPKKKVLLVEDHAVTRVGVKHVVNASNDFEVVGEAEHSSQIANLLQETR
PDFVLLDLRIPGENVLNMVKDWKKDLPQLKVVTLTMLDEQPIVHSAIEAG
VDGYLLKSDDLSSLTRNLNEIASGKTVYSKNLKLSFNRKPQDGKVANKKE
KQILTLLGQGKTYQEIGTDIGLSKRTVEYHVGRLKDRFNAKTVAELIGRA
KEQMLI
>LEPBI_I2150 Putative RNA polymerase sigma-70 factor
MTLREKEKILLQKIKAGDPTAYMTLVSPFRERLFRKAVSMVKDGDDAEDI
VQDALISGYKSIQNFRAEAGVYTWLYRIVVNKSKDLLAKKKRGREKPMDD
SGDNQFVDSRVGYEKKLELSEESSYLMSKIALLEDSYKQVLELRYFENLS
YNEIAEIMECNVGTVKSRLFKAKEFLKHLIQKDEKGEGFFEK
>LEPBI_II0039 Hypothetical protein
MGVSERKKREFAQRESDILNCAIELFRTKHPSLVKMDDIAKHLEIGRGTI
YLHFKSKDDLMARIQYEDYVRLRARLEKAFEEKTAIEMSRRAIRAYIEHC
LGDKHMYVVAKQCGVNLNIENVSDDLRKMLIDERSNRLSLLEKIYKQAKN
ENLINSRGTYPNVAVAWGMIRGAVEVILDGHFQNEIKSEKAYLETIEHVL
FFGLFSGGNKGET
>LEPBI_I1518 Putative transcriptional regulator
MAKQKTSEPSQLKSHLGYHLRVVSNAVSHSFAKKLTNWDVTVAEWVILRE
MYSYKENSSPSIVAEFTGLSRGAVSKLIERLLQKGLVSREEAAIDRRYQE
IKLTKEGRKLVPKLSEIADENDISYFSVLSQKEREELRKILSKLTTAHKL
NLTPIE
>LEPBI_I2834 Hypothetical protein
MTIVEKVTFRILLPDDHENISQISNWYFEEWKIPIEKSVTKLNTVANDQS
QFQVIMYLDSVPVATGGIYNHVGLLDLQPRFKIHKHWLGLVYTDPRLRRM
GFGALLCEHLELLARNRGIPELFLFSDTAVALYKRLGWIELEEVAYGNRI
VTVMKKGILE
>LEPBI_I1241 Putative transcriptional regulator, ArsR family
MAVKVKSPSEKRKETAIEALNLVLDSKFLTALAEPSRIEVLKQVIRHGKA
DISELSEGLSLDRSVISRHLLTLQEAGILVRDKQGKHVYYQLEPNQAIQK
FKAILNHLEEMVAICCPPSN
>LEPBI_II0242 Putative transcriptional regulator
MDLRRDVFQAIADPTRRAILLLLATQSMTAGAIASQFDSKRPTISKHLLI
LTECELLHREPIGREMYYHLNPNKMKEIANFIAPFQKLWDDRFNNLESVM
KDYKRKA
>LEPBI_I1062 Putative sigma factor sigB regulation protein RsbU
MTDPQTSLSKFRSLLHISSILNANLDLHQLLPLIMLYSKDLLEAEASSLF
LLENDEFLYCEVALGEKGEIIQEYARLEFGEGIVGMVAKEKKPIALEDAY
KDPRFNPSMDKRTGFKTKSLICVPLFVEERLIGTLEVINKTNDRIFNDAD
LEYLISLSEVAATAIQNANTKDSLDKRILELSLLYEFEKLSVSEKSLNEL
GKWMLNRVLEYLGASSGTIYLANTTQQELGILAAKGIPEDAYDQIKVPFG
KGVSGWVAEKKESLLIHNLDMDPRYNQLSPFRFESKSLISAPLIYQNELL
GVISINNKLSGYAFQHSDLDLLTNIAARLSNTIKNAQLFHQIVDTGKELN
RAKNIMQKIMPSVLPETKELSYGVSHIPLEQVGGDFYDVTEIDEFQYSIL
IADISGHGLSAAVLAAMSHMVLKNFEPDIKLSPSLFLTTLNHMLFGKLAG
NFLTAFYGIINLKENSILCANAGHHAPFLMKGTSADASALDVKGKILGLI
PDLYYEEKKFSFGSGDRLVLYTDGITEHMSKDHNKRYDDELFQKAIIKGK
SKSAQDCANSLIQEAKDYVNSNEFADDVTILIVDRK
>LEPBI_I1787 Putative transcriptional regulator, MarR family
MARELPKRFRSVRYFDRISSEIADIVRTEMEKLGFPGLTTSHFEILTFLI
RTSKPINMTQIAKTIEKTKPTCTVLVNRLVKEGLVDRNPSPSDGREWAIL
LSKEGKKIRKKIVTISAKLLSLQTWGISKENEDILYPILDEIYKHIRNRR
GIV
>LEPBI_I3355 Putative transcriptional regulator, TetR family
MKKEPTKLRLLSVSRNLFLRQGYSETGLNQIVDEAKTVKASLYQHFSSKE
ELGKEVLKLYSDENLNLLKTLMKRNPKPLDFIKAWVRILTREARQSQLFG
CGMANFRAQISPVETQIRSEIERIANETIECLTEFLKESIQNGYIKPDVN
PSTLAKQLFIVYEGVLQSYRLLDDKKSLDELYKIAENLIPIPE
>LEPBI_I0628 Putative transcriptional regulator, LuxR family
METRKVRILFLVFYVLSLLVWIIEEIYTLSKPPEYFDRFRVLIATIESFI
ALSSFLVVFILYKELKKEAVENRQAKTQIHDLKRTNRILINPEKGFWAEA
KAQMTDWNLTDVETEIAILLLRGFSQKQIAAVRKKSLRTIENQTASIYEK
SSMRGKLEFISFFLTPLLPEED
>LEPBI_I1716 Putative transcriptional regulator
MNNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGAQDPTEKFKSSCAK
YLKTSVDKLFNDSAVEDIYPEFSNGLKNKLWAVRRELGIKQYDFAKKLKV
STPFLSKVELGLLEPPEDFKNLVSKVLKMEKNELFLG
>LEPBI_I1454 Putative aspartate aminotransferase (Transaminase A; ASPAT)
MESNLTNLFLAKRTKHIRSSLIREILKITVKDSEFLSFAGGLPNPNLIER
ELLQKATEKTLISSAESALQYGDSTGVSELKQLILDTFVGMEGCDTNSIC
ITHGSQQGLDILGKLFMEEDTNVLLEDPVYLGALQAFSPYQPKFFSLALE
ADGPSLSKLREILSSRRIHCFYTNPSYQNPSTITWTVEKRIAVAELLDEY
EVILFEDEAYQFLDFSGTVYPSIASFRKNKDLTFVLGSFSKIISPGFRLG
WVVVPNVYLEMFTRIKQGNDLNSNQFSQIVLLNLLSRFDFKEHCSKIQSY
YHKQKQHLVDCLARYLPEVRFQNPQGGMFLWVEYPNVSEKEMMQHLMEKK
VVMVPGNEFRLLDSDSAYFRMNFSFLQTVDMEEGVKRIASVYRDIIT
>LEPBI_I2459 Putative serine phosphatase RsbU; putative membrane protein; putative signal peptide
MLMKQILIFLFFSFSISAEVVSLDSRWTFQSEGEKFPKQIKVGVLLIEQG
YKVPLRGKYHLILPIDQLPETSISVYLDRVHSADNTYWNGKLIGTTGGLS
PNYYPYWHKVRYYEIPNSLVLLGENHLEVEIECRETEFRCGLFRSIPLFG
SQNEIKDKMIYEDVNQIVMAALFFGIFLQQAIGYALNRSSKSGLYLAGTA
IFFVCWRLPVLNKIHFLGIHPEILVRLLFFCQFIFPVFIMLFVHTLIDRK
ITKIAFITFLFDTILALIQLFELNPDVRFYFVYIWYILLGIKVPILVQLL
AKNYKKSSEAIVVSIGALVATFFGIADVLTDVITGKNAYLTQYGILSFLF
SGVLAIALQSSRTKKELRNLNESLEMIVTLRTQELQKQYKLLHDDLVMAA
SLQSKLIPPMEFQYARLNVASMFMPMEKIGGDYFDYYIHEDGSLTFLLCD
VLGHGIAAALIASMLKVNFLEIAPKIKDPSLFLKEINLKILPVIEKNYIT
AVASHFDLKNQILRYSVMGHPSPFHLNLKDNSLETLGGRGPIMGWKKEVQ
LDTYKIPLRTGDRFFFYTDGITESHSREKEMFGETRLRNQLLEGNALSPK
ELNEKIKKEIKKFTFRLSDDVTYFTIDFL
>LEPBI_I0617 Putative transcriptional regulator, PadR family
MKRESKTQYALLGILSQCEMNGYEIRKYIESTISFFWSESFGQIYPTLSK
LEEDGFIKEWEKTDTNGKKKKVFKVTRSGLEEFRRWMDQSPIQSNKRNEL
LFKVFFGRHMNPKLLVEQLDSEIKKQKDDLKTLKVFQKELKTDWDNHPDN
EYWNLTLEYAEKQTHLNLEWIQKVKGKIQEKQ
>LEPBI_p0023 Putative transcription regulator; putative membrane protein
MTKPCILSDFCRMSEFLGSWLQFGAWYHFVLGIGILVKEKGSKGFPFAMI
AAFSGGTLIIYAYRLFAGFEFEFSLLNHGYVPIIYLIPGSMQYTIEQFLS
TEPVSIGRLQRLYPTFLVMILLIGLQIFYPQVLEQSMNESFTGLPFSIPE
YLALLGCLYWVISFVWMIYQYRNILYRNPNEEAKLGVRVLGMILKGNITF
ASFILVSTVFRWNSGIYFTAGLATLMAVIAFIGTEINHQLFKDILPGLRQ
SYRTSRILNLNLEKLQQDLDHLLKQEFVYREETINLSNLSERLGIKDYQL
SEYINAYLGMNFNRLVNEYRIAEVCKLIEENPKVNLLSLAYQVGFNSKAN
FNVAFKSLKKMSPSEYAKSIAKSK
>LEPBI_I3048 Putative transcriptional regulator, TetR family
MEHSRNVLEKTGVSSLSLRDIAQDLGVSHTAPYRHFPKKMDLLQALVAQG
FKELALAMKEAWDHSEDPLEKIRKAGERYIYLLLNNPRRTELMFGGEIYV
SGDPISEELRECGNEAYMGMFRIVEYGQNQLVLKKSVPTATLMMSFWSGV
HGFAVLNERKWKQIQSNEEEKQSFEKEVGQILEIMIEGTRL
>LEPBI_I3347 Putative phosphoserine phosphatase; putative membrane protein; putative signal peptide
MKVLRDSFIIGFLFVFCFEVQAESESIDLTLLQNKPIHLSQSMLVLEDPT
NSLDFHRIKSIESNLLFQKIPTAKEAFNFSYSKSTYWLKVSISNPNQHSM
ETNLVVSYPRLKTLDLYLESKEGVKYVPSGYSVPSNKRPYQSRFFVFPIV
FSGNSNTNVYLKVNSPNAINLPVQIWKQKSYDRHEIDDHVIQAIYFGITL
AMIVFNLFVFFILKDVSYFLYVLVVISTSVAIAIHNGIASEYLWNDSSWL
DQYAINLMISIVLILFLIFMRTLLQTKIVLPKFEPWNWFFVFLQIGLSIA
YIISFDTFIKVFVLSHTVTSFWILLIGILCSIKKQRIAYFFLLAFAFLFL
ALIVSTLRALGYIPTNVFTIEGPQYGSAAEMMLLAFALADRYNTIIKEKE
IAENRVKLNLERSNLELEEKVKERTSKLNQTLSVLRRDLDVAKKIQENSI
LIDPKLRNALKLHYRYLPVTEVGGDFFDIIHLKDSSYRIFIADATGHGVH
AAMITMAIKGLYDPIKEFELPPHKVIEIFNEEFMDNFVSLNSLLTAMIID
IHTESKIIEFASAGHPSAVLIQKGNLKLLPKTGRMIGIKKQSHYEKMEIP
FGTGDRLFVFTDGAYEAFNHNEEEFGEDKLHQLLLETIHLPLVEVEDTLL
KTLQNFQNGPDRQDDLTILSFDL
>LEPBI_I2935 Hypothetical protein with putative DNA-binding domain; putative membrane protein
METESITLNVLLEFLWMGSGAIFCIIWSLSNLVNNRKKSDFVWSFILFST
GLWLLTGAFMFTGFYLYFPLIVFIHIPFVFLSASFLYYYLEFLFLEKQIK
FHWIGFLPTVIAIVLLIPYYLESNEERIHILQSLQSSEYGSVLSGLNFGI
KLSILLSVGVFLIREWIPNVMLSVFFTKRAIYSLIFILLVWLDLLIGSIG
FSFQLPFFRKLSAYLLPILMYFYYFTRELWEPFVSDVRDNIQKNKYEKSK
LVSVPLEIIDQKLYELMQEKVFCDEDLNLSKLAEMVGVKSGQLSEYFHKR
YGFGFYHYINQYRIEEAKRYLLEPTERTILSIADSVGFNSKSTFNRVFLE
KVGITPTDFRKQSKQTKS
>LEPBI_I3011 Putative phosphoserine phosphatase; putative membrane protein; putative signal peptide
MRILSFFFPIFFSTIFSLVAEPVSISANSVVTLSENWTFTTNGVTNPIQV
GKGLSLQGILPPVEGYYETQFIYKPSNKPLGIYLDRVQEVDTFIVNGIRL
GQTGSVTNDGTYLPNWYYKRLYYIPNHVLKENSTNQLKIEIHFRNKTFQG
GLFRRVPIMGNYDKLHEQILIEDGRDFCFIMLFFGIGAYQIFSILLKRQA
KTNFYLLLSTLIFVMWRLPLLNISYTYTDFTFFFWLKVFFTSQTLLPVSI
FLFSYSLFQNKLSLKERLLVLFLITIAFVQTWNIELPTRILLLRIWEFSL
LFIVFFILRAVIRAARAKRTEAYFLSIGFICICFGATFDIIIDVTSGKNI
YLTQYGFLILMILSGVAISYRNAKNETELSILTKDLEIRVRERTIELREK
NQDLEQDLFFASQLQSYLLPKNHPNTKGIRIHTTYLPMRQVGGDLYDWVE
LDENRLILLIADVAGHGVPAAFVSSMVKVQFRESTKSIHSPKLILEHMNQ
ALTSLVSRYFITACCALVDTKENTIIFSTAGHPNPIIFNKIQKRFEFMKI
KGPIIGWKESFTFVEWKHQMQKGDRYFFFTDGVTEARAENKLFGEGKILD
LLEKGKDKDIKSLSQEIVVQITKYSEAELKDDVTFFFVDII
>LEPBI_I2805 Putative transcriptional regulator
MPKIVDHNLYRIELLSKSLPIFVSKGVASVSMRELSKELGVSTGTLYHYF
PTKEALFSSMVKHLVSSDAEAIHKLSEENANVNDIINFVSGKEGHFLNLM
LLAVDVKRQLSDSEELAQLVEESFTSYENALNRFFPKETEGKGGKAFLAF
FVGVLFLKLKGEPETSWIHLLEGLKYLGDLFSGDINEI
>LEPBI_I1222 Putative transcriptional factor; putative membrane protein
MEWKALDFARLYYSEQSKEFKFIDTGDTIPKSKWILPESLYPSFPIPKQN
SGDYFYIRIQSKSLISFPIRSLSERSLNKRMIVETAITWLIIGVCAVMIV
FALFYFFAFGLSEFFFYAGYVVCTVLWYNGQYGNAYDVLWPESPWWQNKA
ILVFSTLGIPFSFQFVRMFLNTKVNNPRIDKILLIMGIIAMFCIPAILTS
YTTKIFSRIATYIYLISIPIILGTALKNYIKGEKQILFFLLSWGSYFIVS
YNTMFYFLGILPYSTPLLYSAVFIFPIDLFFLLFNLLQKYETLEGERNEI
LHRIVTLNNTQNARYVKSKLNSVNTEESLAKLESWMRVTKPYLDEKLDLE
IASLAIGLTVQQTSELLNSKLGVSFRSYLNGFRIADAKKILKDKPDMSIL
SIAYATGFGSKTAFNVEFKKATGQSPVQYRQSGGENKI
>LEPBI_I2429 Putative transcriptional regulator, TetR family
MVPSEKIDTSQETMLTRLPLRIRKKKKTEETILLVAKQLFRERGYARVTV
PEIADEANVSVKTVFNYFGSKEELAFREEVQFCDQLILHILSRKQNQSIF
DAFQNFIWTLIQSIDPDQLIESLPGFHPWMDDPALEQRYLLLWENYEKRI
TDALQLEFGKNEFDPVLRMIACQMVSILKTLGSKDFKVYLTPIPGALRYR
ALEKWTLRSLDLVSGIRNHLSN
>LEPBI_II0151 Putative two-component response regulator
MYSLKKSCQKVSVNHPFCIVNSKLAAKILVVDDNETNMEIITHILLGQGF
EVAVAYDGEYALELAEVLDFDLILLDILLPGISGLEVAKRLLSMERHKNT
PILFLSALNETSDIVKGLETGAVDYITKPFQESEILARIRTHLKIKTLEK
ERIDLLYAIQKDLELAKANQEKLVTFQFPPSPHYEIFTSYKPMDLVGGDL
ITYDVLPSGDLDILFGDVTGHGIAAAMVSLMAIITFKTMNKSFLSPSECL
YWLHNTLTPLISTHFISAVYIRYRAEENLLSFSMAGHHHMFLLRNHQIKK
LGTKGFCLMMFPDLLNTNNEDIVLQSGDRLFLFSDGMFEVPNEKEEYMGD
QKFSEIVEKNIELPSQQLLDSISEEVLRFSEGKVADDMTMLLLEVK
>LEPBI_I0365 Putative negative transcriptional regulator
MYIPEPFQMESSSVFQFVKENSFGILVSELEGSMVATHLPLLLSPDHQFL
IGHFAKPNPQKASMNQEVLCIFPGPHCYISPSWYETNRSVPTWNYTAVHI
KGILTYMQDPIQIKESLELLVKTFEASESTYQLSEVNQDYLMGLQNGIVP
FQIQITHWEGKTKLSQNHSVERRKRVIENLERMPGDNEKAIANLMKQSLD
QKS
>LEPBI_I1458 Putative protein phosphatase; putative membrane protein; putative signal peptide
MRKVILGLVCVAIALSSFQCQNPDLEGDLRFRQGILDLREITFKENTSIE
LQGEWELYFGEFHYPPFHGQKELTGYLAIPNSWQNEEYGGIELPRTGKVT
LRAFIHTNKQTVGQELRIYIPDIASSYRFFANGVLIGGQGKPGINQFDDT
PRIKSKYYTLIPDDEVIELVFHIANYENNFGGFWGNPIIGNKYAMDREKM
FANARELFLLGALSLIGLYHFGLFFYKRKEKSIFYFAIFCFLLGIRLAFT
GERYVLELFPRFHWPTAFRIEFASYYFAVPTFLLFIHSLFPEESKAKHVR
RAIITSSLFSLTLFLPISIFTILLYGFQILAFIIIGYVIHINLKAVINSR
PNSKLFLMGLLVLAFSVSFDILKHSLNSRGIGLTPYALLCFIFIQSLILS
SRIANAFVRAEELAESLKISNESLLAVTENLEQIVSDRTYQLNSSLNRIK
KDLLLAKKIQQKILPEDGIKFDPLKIHLYFQPQDEVGGDFYDIFELDNGT
VRFFVADATGHGIQAALYTMAIKSEYEAIKRFITKTDDLMNHLNQKIQNK
FSGLKIVFSGFLLDIDTKTKTVYYSSAGHPNQIFVSNGTQIILNRTGNII
GLKKDQPYTQKQFPILEGDRILLFTDGMLEQKNEAREEFGMERIQTILSE
FQNKESERVLSELVIQLFLFQGKEEQEDDQTMVLVEWEKKDPVT
>LEPBI_I2191 Putative transcriptional regulator, MerR family
MHIGEFSRICKISKESIRYYEKEGLLKGSRKENNYRVYSKKDIRVVELIN
SLKNSGFTLFEIRSFLNLYDSDSKCKEVQIKLENKLLIIKDRISELISIQ
EKLNKSILECEDNPNKKFCNIVSSSHL
>LEPBI_I2403 Putative transcriptional regulator
MAKKIKSKLGRPKKGQTQINRSLVLDLAWDTIQKVGFSDFRLSTLAEVLG
IRTPSLYNHVTDINDIFREMKKRALRLLGDRLEAVSKLTVGNSGRISQFL
KTYRGFSKDFPHMYPLVIVSTELDPELKVLGDRILQLSLDAFQMANLDKE
NIHKIRIIRSFVHGFIDLEREGGFGRKESIEESFQKLTESLETGKLW
>LEPBI_I0889 Putative acyltransferase
MVRDLLESDRNQTIELVNQFFRKVNELELDGLFRIRPRAATKFTDIYFKL
IGTGKVYMRGYFVEEELVSLLIGRVEEKPHLEEERSLFIDLAVTKLGKKK
KGYMSELLKDVDLWCFEKKIPAIELRAILKNEEAIQFWNKSSFEPFYIRY
RKRVNGT
>LEPBI_I3033 Putative transcriptional regulator, AraC family; putative membrane protein
MSKIINLDKKILPRRFSGTPNSLPCHGFLSKLVLSMHTLNRVLFSLAFLL
LLEGCLWKPEVFYGRNISRDVEFLAPVKGIVPTTCDHNSIQKLKQMHWVQ
NQSEDSLRSQRNPKGQWLHFQISNQLPTAMNFNVLIQWINIPSAEMCSEN
QKGEIEDTYSGYVWENWLGVMSPFPHFQVTLESEESRDFYIYLLSNENLN
FPIRTISNSSYRFIVLFRFLTFLFFLMMGIVSIGWAVSEFIKSKEKVYIS
ILLHFLLFFLLVYSVHGKELVTLFGNGNNIIRHSYYLFLSINHFVFFLYL
YYFVKFTNETLEHPKLFWMCAFAGFLYLLIPVFTKLYDYRIFFVLTIFGS
AAYFLRQTHISLVENKNKEERSYIFGWAMFLFLVFLKTLFHFDFYPYQAF
FIYASVFYLPFLTAGSFLFLRNYEKRDKNKTRFRTVTNRIDTKDLKLKLE
SLLESEKVYLNENCNEEWIANLLNVSYHQLSELINVEFNLNFPTLLNLYR
IKEAKKILLEKPELNVAEVGKMAGFGSRSAFYLEFKKQSGVNPNQFRKAT
SHSKKDK
>LEPBI_II0053 Putative RNA polymerase ECF-type sigma factor
MTSFDFETVVKETKYLVLKTIGDTLIDRFDDATEDVVQEVYFRVFKSLEK
GGFDGRSKISTWIYTIAKNESLRMNEKRLREEEKAKRYLQKNKSDLFQTD
ENHSILKEDWINSLLQSIPEVYRQTLRLYLSGKSMEEISNELKIKQGTVK
SRLFRTKEWIRKTLPGVKNEFQES
>LEPBI_I1600 Putative acetyltransferase
MEPIGHGYTIERITNPTDSLQEDLWLRLHEYSISKLGDKSLESKEFFAIL
VKEGDTLIAASLCYLFFKGLNLQLLWVAEDKRGQDLGTKLLKEIESEAIK
LGATLIFGYSFGFQAPKFYLKLGYEEVGQIPNYPEGQNCYFLCKKLTNNS
P
>LEPBI_I2504 Putative transcriptional regulator; putative membrane protein
MQWTGSGRKWTTEGDLVPKRKHLFPNHPFPIFSIDTKSLKDHPTFYLEAK
TVSNFLFAPKLLTKDGILQSVMETRDHFLVFFSVLLIVFILNLSIYFNTR
NTSFLYYCFYILCSGFYQISYTGYGKIYLWSDWIRWNDRSLVFFGSIALW
SVILFSNSFLLLSKRMPKLNRVMIVFSVLVVSNAILSLFWKHIIFDQTIH
FLAIFVSFTLMGAGIYVFFQKYQMAKYYIVAWFCLLLAIISFNLYAFNIL
PDHFILRNAIQYGNFFEIILFQFALFARIQETKEVPIFFATVSKPRLSEQ
RIANLNSDQILKDIDSALVTEKLYLDEDLNLQNVASKFRLRTDQLSAIIN
QKQGINFNQWINGYRIREACQLMEKDPEKNILTIAFAVGFNSKSAFNDAF
KRVMGETPTEYRKRFLQLV
>LEPBI_I3027 Putative transcriptional regulator, TetR family
MNHTLNPRKVPQQKRSKERYQKIVDTAIMLLGEVGYDDLTTDLIAEKSGI
SVGSIYQFFPNKESIIYSHAEACYLIMHDLFFEKVSKALKKTKKFTPEFV
DFTLIAYEQTLSEVKGYRLINSILYTNEALLHLDIESNERFAKSLADKVI
LTMFPKVNQKRAFYIALMIVESVDSVTKIIHRTSKISEKKQVLAELRTLL
LVYFSSFQ
>LEPBI_I1420 Putative phosphoserine phosphatase
MSSRKPDFGRYQHLESFIHLSKDAIWCYELDVPMPISLSKEEQMEYIWNH
SVVKECNLAMVKLYGFHSLEQVYGKYLKEIVNMESVYLLRKFIENSYLLE
DFEYKQLNTLVPKVFLLNSHGQVVDGHLVRIWGQQIEISSIRESESKLSE
LLQFSQIVTEVSKMFVHTKAEFVSDAIQFALEELGKYSKADRVFVAEISS
DKQFLSTSHEWLNGDVPSLFEVGTKLPISKMNPERLGVLAGDGVIFIPDT
TALREESWHLQLFKTAEVRSILVIGLRDEGNLIGILGVTTYQSLGEWNDE
TKQMLGLVARFVSQGLVRAKNEIKLMKKEKILQRFYSDIKEDMALAKMTQ
EAWVAKDFGAIPNLKIESRFLPYDDIGGDLILYEKPNPNCIDIFFGDISG
HGISSALVSGIAAVSFKKHSLLESSPSAILEAMHLDLKTIIFKHHISACV
MRIYPLERRIEFSFAGHPPVVFWNENDRVMKFVKDEMYPILLLDVWKGKN
ISKTFSKGDRLLLYSDGIYELEEEAGGYIGLDVFLQELSEMISVSDDTDS
LIKKMIANCLVEKDRIIHDDIAVLFLEF
>LEPBI_Ia2473 Putative regulator protein, TetR family
MDKLVDASLSPDLASRPFKFTSKQGRNRRAQLLSIAFELLKEKNPEEISF
ADICKKAKIPRPSAYHFFPNVEAIFHGIRLLHSEGMVEKLTALKEESFQT
WKEYIERSIEVAIEVTNSEIAFPRLIYGYRMSNPEMRLVGQELDLKLANL
TKQGLVEKFDIPSINTLDQVFGVAISIPDSLLKLSYRTFGDFTPWMIGEA
KKATISYLLNYLPEVCEPRK
>LEPBI_I0798 Putative transcriptional regulator, MarR family
MLKNQICFSMYSSMHRLMKLYRPLLADLGLTYPQYLVMLVMWEEKISTVS
KIGDKLQLDSGTLTPLLKRLEQMELLDRMRNPNDERSVNIVLSKKGKSLR
DKAKLIPEKIFCLSGIEETQANQLKVILDHIGY
>LEPBI_I2806 Hypothetical protein; putative membrane protein
MIGDLQIPLLLSLAALVSNFSVLLLTLGKNFPILITIRFVSIVLILGNSF
LIGTFLSGSEGEAYVYFHLFRSVIFFIPYLFLKVTYNLTARKQNSRLLQI
ALLLTIFYVLFINIDYLRSESLLIAGWNRNPWGFWPILHLRAKIFIGIGF
FIPFLISLYLLLNPKETLEKENLNFSFLLVVWWIGFSCNFLALFGVNVFP
FGMAIDTIISVLFSLLLTRYWRSHFFVLAIEFFSVLSCTILCFILIHWAM
DFNFSIRYFGSFIIGMVFVFFLFHFFQFMKSKNSNPFLWNRDIDLKNGTF
QFEFDTTKLKQKLNYYDVTKKEIQIAEMITRGFSKKQIRFYLDITDGTFR
NHLSNLYAKTIDLESPQTTGDKFQRLIYFLTK
>LEPBI_I0398 Putative transcriptional regulator (DNA-binding domain)
MEREKGIPTKGVLRQKKTQTFTKQNRYFPKKSLQFFIEHYWSVEWNLPTN
EMFVAETLPYPSVHLVFENRNSKVYGVHQKKFSICLQGKGSVFGVKFRPG
GFFPFYKKTISSLTNLAIPIQSLALPSNIDILKIESKICRTNNVKDRIII
IENWFDQIKPIRDSKIDTINHIIDDIKSDVSITKVDQISKLHTIQIRTLQ
RLFLEYVGVSPKWVILQFRMQEILERLEKEQMIHFADFSNEFGFFDQAHF
NRMFKKFIGFTPEKYLESLK
>LEPBI_I1453 Putative bifunctional protein: transcriptional regulator/amino transferase
MNLTIGIQMEKTKYQQLASDLKKEIESGYYSENEKIPSLREIQSLKSCSL
STAKEAYRILEEEGYLYAQNKSGYYVQKQISSVIFGPQNQFYESVEADDR
IQQIMNTVMDPKLLSFGAAIPSETYLPIQELNTAFKRAFLHKDIFSYGDL
QGNPNLREWIAKRTSLFGYRVISKQIQITSGCTEAITYSLFAVTEPGDTV
IVPSPIYVGLFQILETLKLKVVEIPYRSGEGINSTEFEKLIKRHKPKVFL
FAANFNNPNGILFSDQTKQNLANISYQYGIHLVEDDIYGDLYFDGSRPKP
LVSFFPEGKNGPRSFLCSSFSKTLSPGLRIGWVSSKTGISALSKISRAFK
IAENHPTQICILEFLKRQTYERHLKYLRREYKSLCQDYIQLLVKESEGNI
KITKPDGGFVLWIESALDGDKLLLDAKKMGIAIAPGSLFGLSKHWNQFFR
LNVSVGSSPKIREKLSLFAKRFLKK
>LEPBI_I0212 Putative transcriptional regulator, ArsR family
MPKEGKGTDLVFKAMADPNRRKVLDLLFSKNGQTLGQLCEELEMQRQSAT
QHIEILINANLITVIWKGREKLHFINPVPIYEVYERWVRKFEENRLGFMH
DLKKQLEGENHGTT
>LEPBI_I3272 Conserved hypothetical protein
MSESPLLLVIDVGNTNTVFGVFREGEETPDFHKRTVTRRDRTSDELGLFL
KGFLTQENVKADRVKKAIYSSVVPSLNPIVERMLEDWFDVNPLRVHYQMN
LNFGISYPRPFEIGADRLVNAAYCAKMYPGKKAILVDLGTATTFCVISEK
PEYIGGVIAPGLKISMDALTRNTAQLPPIVFGSPKHVLGDSTVESIQAGF
FFGWIGLLKEIVRAIKDEHPGDYVVVGTGGLVTTIHASHNQVFDEIDPMM
TLKGLKILADLNS
>LEPBI_I1575 Putative phosphodiesterase or phosphatase
MKPNSLPPIILKNQDGGFYLSSSSELDDLYHFILGQAKRFVSAKSAAFYL
RNERGNLSRIGLISDKNNAGLIAKHVFKSKKSILVKKGTHLNPESAPASE
SYIACYLGDEIGDMSLGVLVLEGIKHFQNFSEQDLDLINYFSANLNALFK
DTVFSDKEPQFFNSLTTSVLLLIDNANIHNNNNRLQYFLEEIIRVAVLIN
TSVDLEHVLVMVMESAKSVFRTEASSLLLLDEKKEYLVFHTVTGEKREEV
SKIKVPVGQGIAGTVAVTKQPMIINDAQNDDRVFRDVDKASNFITRNILA
SPLIVGDEVIGVIEAINTIDRNNFSQDDIDTFLSFSSACAVAIQKTRLLD
NLNVTNLELKQKLSTLESIFDLGQAVLESHDELGLMSKTLSILTKELSCE
DAGMVIIEEKNKNRIQVYARQLGIVRESFFPMFESRLFLSLMESGNPRMA
VVTPQLEESFLELEFYTLKKNFLILPIAPRGGNLRAALYVSGKHSAHSFN
ETDLRMLKTLSSPLAKAYENLRLNQEIITKKSIEKEIEITRKIQNNILPN
GLIQSPLFDLGVMSVAAKEVSGDFYDFHAFGDEQFSFLVADVSGKSLPAA
IFMAMSSSIIRTLSRTTDLSPSELLFRANQLIYEDSQSGMFVTLFLVNYQ
RKTRTLKFASAGHNDQIWIRGDGSYELLKGKGAPLGVVPHTNYQGGEIQL
EPGDILVFYTDGAIEEKSPDGEEYGLDRFIEFIIQRRDAASQDIVEAVYD
DIRSFSNSEEQYDDFTVMVLKFAEVTSFEMVKSFDASPNEIPKLRDFISE
HLESKITKPFAFDDILISLDEAATNIVMHSYKDTEILNPKFECKFELIGD
KLKIVLVDEGKPFDRKKVPKPSVEANLKGERKGGFGVYLMETLMDKVSYE
YNGKQNITYLEKTIV
>LEPBI_I1981 Putative transcriptional regulator, ArsR family
MKIKTELSKQQLEQAIKGIQGIAHPIRLLILYTLAKEEKTVGQLVELLGT
SQSAASQHLSKMKNNGILESRKSSNQVFYRLKDAKFKDLIQTIVKVYKK
>LEPBI_I3376 Conserved hypothetical protein
MTENPDSTRGKLLISNSSVIQDFFHKSVVLMVDHDDDGAFGLVLNKPTDQ
TMESLIKNLPDTVHSNKPVYAGGPVDNLFVSILHNGKQTADPGVEVVPGI
YMARSFDTMLEVLSSDQIQFRVLQGYAGWSSGQLESEFDRLSWVVSDLVD
DSIVFKEDESEVIWKEALRSKGGIYKYFVDHTKDPSLN
>LEPBI_I1042 Putative phosphoserine phosphatase RsbP; putative membrane protein; putative signal peptide
MKPILSKFTLLFTLYSLLVIPIFADANEDMGERLVFTKEFTYWIDTKSNT
PVDSVLTTGKFQAIDDEFANFGFLKGTLWLRLDPNQFPDPTKFPLLLVQA
HNIDLVELYHKHEGDSFIVSKSGHIQPMFQREIPHRNFVFRLGHQKETIL
IAIKSDISLQFSLVFTNQRNLQREDYVTQWVYGLFFGSLGIIILYNLAIA
FFVRDKSYFYYIGYVLFFGLGQLSLLGFFGYFFVPNSYYWKRVGIPVFFS
LCLFFFVLFTANFLKIKARLPRTTRFYFLLGAFSLFNVCIALFGGVAEAS
IGVSWLSVSICLTLFGILIWGLKKRIRSFYYISIAFFLLLLTCVIYGMLK
FGILPSNSFLEEMLFPIASLADITLFAFALADRIQLLRQEKDLALAQVTS
LRRERKISRDILMQSLPKTSPNVKNLQIQIYIQPMKDVGGDFYEYHSPNP
YELGIVLCDVSGHGIPASLISAMGKVAFTTQKDSISSPKQVLEGMNRVLF
GNCSPQYVTASYLYLNSSTKIWRFGRAGHPSAFLQRSSGEIIKVHPKGKI
IGVFPEIQIDETTYPVLPKDRILLLSDGVLECFDPKGNMFGDTGLIEFLK
TNRELPNHLFKGKLIQTLESFSNREIKDWEDDLTFIFLELV
>LEPBI_II0143 Putative RNA polymerase ECF-type sigma factor
MSDNLVSMSQIYERSHKRIFDFLYKYTQNADTAMDLMQDSFLSFHKHYGN
AGLSEEKSIMVLYTIARNLSINYAKKFSTSREIASDEIEFHSHNPKLETK
AEYQDLEDRLYSFLGELSEEERSALLLKNVEGFQLVQIAEVLGVSVSTAS
RLVIKATEKVLAIAKRENLVPD
>LEPBI_I2252 Conserved hypothetical protein
MMKNKSFKAKFDKEYDALNLSETLIELMESQKVSVRELSKKANVSSTVIQ
EIRSGKQDNPTLLVLSKLIHTLGGEIVIKKGKKTLASV
>LEPBI_I0755 Putative transcriptional regulator, AraC family; putative membrane protein
MDAFFRTFYFMGNVMIHLIAFSAGLAFLFAIGEFLRTNSSRQTKVQGLLF
LFAAFFQTHTYLTATELYQVYPHFYLVHLPFTACIGSLLKQYFSELWNDS
PNKNEFSYLELAPAFLVTFLMTPFYLSSAEEKIMIHQSYLKIGVPLPFQI
IILIAVLPIFYSAYYVFSQMVRYIRWDRFKKSAHLRLVGLVVGFGAFASA
IGVYTLFFHARHGLQIVSTFIGFLIIGIYLLRQKSPELWGEVQRIVIEEK
KYQTSQLGSFDLEDLHERLKLLMETKKVYLDETINLEKLAKQMNLSEHQL
SEFLNSHLKKSFFHLVNHYRIKEAKDFFIQHPEKNILTVAYEVGFPSKST
FYDAFKREVGQSPSEYRKNLKK
>LEPBI_I3124 Putative phosphate transporter; putative membrane protein; putative signal peptide
MKQTITIILLCLFHSVLWAEESSCPNAKHYPISTNLGKPTDLSHHLVFTS
TEIPKKEIHEIQRLFQTNPVAFANGEIPNFGNTANQFWFCFVLHNDENHN
KRTITFIKYPLLDEVQFFALRESGEINKNIQGRRYPFRNRDKDYRGFSFA
TELLPSETVTYFVGVKTDSSVSVPLMIADEKHFDSYESIDTLLQGMFFGI
VCVMSLYNLFVYFMVKDKAYLFYVNYLILAAILFQLSLQGLLPVLFLPDA
PDLVYNAHNFLYFIFLLSCFPMSITFMNLKDNAPILYRVFMGLSIIPVIC
LLLLPFLPYRPLNQFGDLLSFCLAFYALFVSYYVSFVKKFPPARFYFFGY
FMLIIGGLTTVLKYMGFFPVNVFTENAFQAATATEVLLMAFGLGDRISVV
QKEKERIQLKAEINKQKLIAYGKELKLAQKLQESTLPQILPKFPGLSIKT
GYFPASLVGGDFYDLTVYGKQQICGLIADVTGHGVPAAIEAAMLKIAYMQ
TLAFANKPGKVLESINVSLAGNYKNQFLTASAIFIDLEQKVLRVANAGHP
ALYKFNENSKSIEVIRPKGKLIGYSKEGMYPEEVHSLIKGDKLFLFTDGI
WDLWENGDSGEEVLLDWLFQRKGESVESLYGGIDEHIRLRNKEGPADDDI
TFILFEIT
>LEPBI_I1743 Putative sigma factor sigB regulation protein RsbU; putative membrane protein; putative signal peptide
MNKSKIKTTNSLRFKIGLFYSLLAFLNIIFFTVMIFENQSDLLLKNFQFQ
SENLANTILTDIQSIGLSRERDEGFEVFRKTLKLYEISKFSIFDSEGQII
HLEPEVEKNGDPIEESVLKKTKEVSSDKEGNLFKARYSLELNESDFTVNF
LLPIRLSDGKEVFLYTHFNISSIQDRLKQLYIQVGYAVIWGVLFHIIFAI
LVYRAIFKRVGDLEIASKDMATGNLESRVNWKFKSEDELDSLGKSFNQMA
EEIQNKVTTITRLNQEINQELQIGKEVQELFLPSVKKFKKFNIGKLYRPM
REVSGDLYQYFQVPEQNFYGFFLADASGHGVSAALVTVVMAMSLQAIMKE
SPSPIHAINSLGEVIANRLQASFFATGVFVVFDEPGVVKFVNAGHNAPFI
IRPSTKEVRFIDSSGPPLGMGDDIQYSLDSFPVEPGDKIILYTDGVVETP
IKEGGLFGLERFTEIVLENIHLTNAEIVEKAMTLLEEKHEEYKDDVTMLV
LDVPE
>LEPBI_I1147 Putative transcriptional regulator, MarR family
MMIETFSFLGIHLSDTLLQMRRYLSYEFELKKVGMKFEEWIQILPITKEE
GLNQKQLSERLAKDKTTISRMVDGWVKKGWVKRIQTREDKRVFGLVLTGK
GKLIWEKGLPVVRDADQIFKKNLSEENEKELYMILFKIQSSLQFSETKNV
PY
>LEPBI_I2223 Putative ATP-binding protein
MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGEL
IVGIKDNSDEPNPEKRWDGFSSIEDLNGLLQTLFNISPSLDLKYTILTCP
SFKGYVIQINIERTAELHKTLDGEVYLRSGAQSIHIKDPQKIVELSYSKG
TTTFEDQTLPEIPPEQITDAEEIKLFLKSFSPKTDALDFCVNQNLFTYKE
WFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPEREHLLNQETIDA
PLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRD
YSISDDVHVLIYNNRIEILSPGKLPGYVTTSNILDARYARNPKIVRTLHR
YPDPPNKDMGEGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPA
ESILKYLNNNPEITNKEVRELTGIKSENLVKAEFYKLRKAGFLERVPEKN
SNKSAWKLTEAGRIESQKYS
>LEPBI_I3410 Putative transcription antitermination protein nusG
MSETNPHSEESAWYIVYTKPRAEKKLSELLRKYHIENYLPIRKERKKWTD
RFKWIHVPVLPSYIFVRIVFWRDKNKVLQLPGSVQFVFHKGQPAIVEQND
LDVLEKGLQEYAESLKMNPELLLQKGKLVRIIDGSFVGKTMEIIKVKNKT
LVVCRIPGVETIFSYEINMDHMAWEELIQ
>LEPBI_I1926 Putative two-component regulator
MEPKDSQHTILIVDDVPENVELLKYLLLQEGFKTYTAYSAEEARLVLLNT
SIDTLLLDVNMPEQDGFSFCRELRTMDQFKLLPILFITSIDREVGFQEAM
KNGGDDFINKPFNKRELVAKIHSVIRLKDLQDELYQQKSKYEKELQTARR
VQDQLIPEKSFIWNGIKAQTLFHPYLQIGGDFVDTWIEEKKLHIVIADCS
GHGPSAALIGAMFKMQLFNLVANMGLKERVSHLRKNMELVLPEDYAITFC
YAIIDPDLNLSYINGGHPAPIIYLDGETKLLKGMSPMIMGINMITNDEVQ
SVSLKQGSKFFMYTDGASEAMNANMEYITEEGMRDIFHESVVSGGDILPT
VQNKILEFCGVSTPSDDMAMVCIQL
>LEPBI_I1443 Putative transcriptional regulator
MMEYQTYPPHRDLSSIIKCYWTLEVETSENNGKQIIVPDGCIEMAFLLGD
GIKRFTSDDRYVIQPSAMVIGQITKPFAIEPLGYVNTFAVRFYPYGFSAI
HSIGMEKLKDKETDLFELFGTRISTELSKQIREANDTKERIHIIENFLLD
QFKEKSNQERVVQMAFDTLNKSQGSASIRSIGKLDSSKIRDLERKFLKQV
GVSPKQLGKIIRLQTALRLMLDENDKTLTQIAYDSDYYDQSHFIKDFKQV
TGLNPSDLFGDKSFLLSTIFYKKE
>LEPBI_I3056 Hypothetical protein; putative signal peptide
MLRKLLTFQFPKSFSFAIGLTLFFGSFPVLVANPDLLEGDIYYYDTVGQN
RSRPPQRPHPNNLHVPTIPAKQEITVFSNAATDKTAYPYIQTAINFVEGH
FSFKAFLADGTEVSYSTRGEHVRYSKCFGELCIIISQKNVLGVSNTSTEW
EKGHIFGEERYEVAVGHRAALVASDRKLYLYNSYTNHWETISLEQETLRS
FANLYDKVAIITSRRILVIDLTTEAQFEQNLLLRRIYQFELRDGFINFYS
GDKLWMFRHQTEAFEEVDLTD
>LEPBI_I0100 Transcriptional regulator, TetR family
MVEKASKLNKSEEILTAALELFTAKGFDGTAVPLIAERANVAAGTIYRYF
ASKEELVNSLFQKWQESLYNKIKDNFPENVEPKEQFHRIWLSMAEFQREN
PIAFDFLEMQYNLPYLDKKSLAKRALLLKFLTRFAHDNRDILIKFPPDAL
IAIVWGAFVGLVKGSRNGKIKLDDQFLKESEDLLWNAIKLPN
>LEPBI_I2996 Putative AraC-type transcriptional regulator
MDLLSDILFSAGWKNDLLSKGQIFQSFGFHFPCERSGGFHVVTQGSCYAR
IGKQIIPLQKGDLLFITRGVHHELLSDPKAKVVTIERFLHEKNNQKIDQN
PVTTFVSVRYEVPDGPVHPLLLELPDYILIPYASIQKHHSLEDFIQILSK
ELELNLGTDLIVQRLTDIMLYYMIRIWLQQEENSPVGWIKAFHDKTVLYA
LEKLHNAFSKEWTIESLAKETGVSRANLANKFRDVLGIPPMEYLAKLRME
KAKQLFQKGNMGLEEIAQNVGYASAFSFSKAYKRIYGNSPSREWKRVI
>LEPBI_I2624 Putative transcriptional regulator, AraC-type
MVCVKPKPNLYPVWKQIEEQLEKEIGLNQIAFLTGYSDWHFHRFFKSVQK
ENIKTYIKRLRLEKAAYELKISNFPILEIGMEAGFSSHEAFTKAFKRVIG
ITPSEFRKKHQIKMKDLSLSQLSLPSGLTKHSFQKKTISPFSILFIRHLG
SYQLLPGPIPNSKEMIQLKTLFSKWDLLEFHHKWIGISQDDPDVTCKDNI
RFDLGFTISEKFPSPPDGFGKQTIPGGNYLQIRYTGDYENLPMIYDWILN
QYCIVSKLKLKNNPPWECYLNPFEPIPDKRITDIYIPLE
>LEPBI_I0713 Putative phosphoserine phosphatase; putative membrane protein
MDPHHPHWVFHLSTNWFNIAFLNSQVSPVWPPEGVGLSSLLLLGPVALPG
IYLGATLANFYNNPHFQTAFIIGIGNTLSSYVNYRIIKRVTEKTDPLYST
KDLIYFLSIGTFPGSLISAVMGVTSLWYWDFLSSELYFNVFFTWFSGEML
GFLIVAPLLYVWFYPKSKLNLELSKQLELFLWIVIVYISGSIAFSDEWPL
LFVPIPFVIVTSIRFRQFGATLSTVVLSFIAVTLTIEGKGVFARRDASGL
SINDSLIFLDAFLFCISGIAYFLVTATRERERAQETSLKSLQVLNELKEQ
ANEELEQKVLERTAVIEEQRIEIEKQLDMAKRIQESLFPQKEIIPNGVEI
LFKNIPMMKVGGDLYDIVWRHDKQELGVFICDVSGHGIPAALLSALVKTS
LEKWKEDPSDLKESLESIRNQIIPNLREHFVTASFVHLHTESGALTFARA
GHFPLFIIRKSGALVSLKPMGRIITPIFDILAEEEKFQLEKGDLIVMLTD
GLTEARDPSSLQMFGEDKLLHLVRELRNQPLVQIQDEVFQSVIHLSGGIQ
AIQDDLTLGLIRYTGVS
>LEPBI_I2820 Hypothetical protein; putative membrane protein
MNLIPIVGAVVSFLLAISYWIESIQKEIGKNKNYFQLVFHDSPPIFLFLS
VTVLLLHIYCELTNQIHSIPFFYGIHVPSIFLIGPLSYLFFEEMSGETFF
KIRFLHFIPSIWCLFLVYSFKPDGYQLSTLTSDHPNLKSFTDWINFLLGF
GVVSILIYILMILVRVLRWKLQSKGKIESSFHPFLFLLIYSLFVIVLFVL
AQLAFMDLFLPACFAFTLLLVTLLIVRMNFRDYLGHFKAEIRDARYKESR
LKGVDIPMVLQRMEELMKLDRLYLNDRLTLTSLAKRLEINTHQLSEILNT
KLGCSFRNYINQFRLLEAEKMLLEKREMTILNIIYASGFNSKSSFHKLFQ
DRYGVSPQIYRSKSK
>LEPBI_I1228 Putative transcriptional regulator, LysR family
MEFRQIVYFLEIANTGTFQKAATQLGLTQPALSRQIFLLEKELGVIVLER
GGRSVRLTHEGEKFYQYSIRMKELWEEIQNGFAKENELKGNFSISAGGTV
SAWILPQILKEILTKRKGLSLSVREGDASETKNSVLKGEVDLGILTGPIA
EPSLNVIEFLSDQIYPVATKDHPIFLKKKIRIEDLKKQSVVFFHPGSALR
KAVEKKIKSFSKEFGPNITMELRSVESVIKSLEAGLGIGFLSKYSMNQKL
QKINFEDWNVERKFYLCYRKKSGPGLTMLAEEILRSTELWKSKKENSSLS
>LEPBI_I3277 Putative response receiver
MSQKKALIVDDSTVTRLMIRKIISEEYPNWEILEAESADKAKSILPDHPD
IDLFSLDQNMPGTLSGLDLVENLKSNYPKSKIVLITANIQDAIKNKAKDL
GILFIEKPITRDKLIPLLETI
>LEPBI_I1427 Putative transcriptional regulator
MDGKRKGSLFYFGERILLGTLGLVTEPHSHYAVSILVSKQTPFLLTTKEN
ETIQTEGIIISPNFFHRLEASDTEIVVIQLDPKSDEFKKIEMKDSYTLLS
PNTIETIQILSEPLFTEDLNCEKARLVYEQILEVLGSKKQNREWDPRIDL
AIGRIKNTLPSPISLAVLSNETGISKDRFMHLFKENMGIPLRQYLLWQRL
HIAARLLQGGENLTTASHAAGFSDQAHLSRTFKKMFGVKPSLFLGGSHLT
KVCFCDSNPEPN
>LEPBI_I2260 Putative transcriptional regulator, MerR family
MLIGEIVKKTGISRDTIRFYEKEGLFKNCLIIRKDNNYKEYSSDVLEQLQ
LIHTLRKLNFSLSEINNLTRIRNPNLLDCNDLSKSLNKNIEIIDAQINSL
LKLKEDLMKVESACSPNCNFIDKKPSCLSC
>LEPBI_I1768 Hypothetical protein with TRP repeats
MVDFKVSKRMLVNFRGQNKVVGGLTDKDKIAILLYISKEFANLDREDQLF
DKVILICQEIFESDNTTLRLWDGEFLVPVKFVKETEPPRRNLKAGEGYSG
TVFETKEPILVNDLSRSAHYFDEGEKTKSVMCVPIMQKEEILGTLAVESE
RENFYIIDDLEILEALTSQLALALYGVRLIEGLVTARAREAAILNQLEWD
LKMGRNVQSQILPQDLSAWNGIYFASHYEPMAEVSGDLVDIVRQGHSLTA
INIDVSGHGIPAALVTMAIHHQFRRSVMAGLGLTEIMEELGEKLREQLPE
STYFTAFMVRIFSDYTFGYVNAGHQRMLHYKASDDTFIQYDTKGVPLGIL
PVRKADYEEKQGKLEPGDFLLLISDGFSEQRNHLKDEVGVERIQTWLHDE
REKLVIEGRGKVDLKKLSAAFIKRFRAYQGEVPNGDDLSFLFLYCGDSIP
EASHYIQLAKQSNSKMKMEEAYAQALKAFSIDSSLKEILVFLGKMYYRDG
KYKEAIRYLEEYLRTSGDNTAASHFTMGRAYYKAGMISEAKRALKMALSS
DHSFAKASILLAQCYLKENAKPKAIKVLQQGVKNTPQSLELKTSLLRLES
HTQKVS
>LEPBI_I1121 Putative transcriptional regulator
MVSKVEQSSDGLDPLISESGDYITDVVKENLKLIRHTKGFSLDKLANRCG
VSRAMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKEKNQDGIHILKAE
NSKVLYSNSKVFASRALFPFLGNRKTEFYELILKPGGHEVAEPHKTGTTE
NLVVVSGKLRLRVGEKVVELEPKDSVFFKADVSHEYSNPTDQETLMYLVM
DYTDEIG
>LEPBI_I0295 Putative transcriptional regulator, TetR family
MRAAEDVFAEFGFSGATTAELAKEAGVTERTLFKYFPTKHDLYKRVLSGL
LLQTILPGHMSDLKERIQNLDPNFKEWYTSILKARYEAVAKDPKKLKLLL
GALLFSKEFAEIFGQMWKVNLYDTSMEAFRYFQKKGEIRNDLDPNQIVRA
SFSLGASFLITKFILAPKFPIDVDLEIQSIISIFYQGISNQK
>LEPBI_I0486 Putative two-component response regulator
MEVGMDGFVSKPFYIENLLQTYREILYKRNQ
>LEPBI_I0170 Conserved hypothetical protein
MGCGKFPLKIIFLLIPVVLFFLHLSLLPQSNHNKRYVFILDASGSMSEKW
DGKTRMAVAKEKLIQVLGGLPKDASVGLVAYGNRIAGCQSARLYHPIQKG
GASIVSQKLTTIVPAGSTPIAQTLQVVGEYLLSDQLETEIIFISDGVESC
EGDPKSVLYNLRQSGKKFRLQILGIDIDPKGEEDLKRLSILGDGNYFPLK
TPEDYDRSFQRIFAHLETKESTIPSLSPPVKVSPVAPIPTLPNQGMIQIV
SILPYEEGSENGYIVNYEYSATHPTQYMIQLYLYPEEEKRRSFPIPPLRE
RRMGDTVKQLVELKEGKEGKGRFVLSLPTGKRLKSSLELWDMSGVPKIIA
LSVEKPIHEKPGFDRNDR
>LEPBI_I2932 RNA polymerase ECF-type sigma factor
MNQTSYSTEEILELVKECGTGNEKALEKFFEHYSQDIYNFPIRVFHLTED
DASDYYIYAFERLKSGKRFKSFVGKSSFKTWFFSVLRNLLIDWQRTKREV
KTQTISKVNQEGKEYSTIEDEPDTRADALALAHDVTDQFQSVLSTIKMEN
RIVFKLSFVYYLHLDPEELQFVAEKTKRSEEEIRTEILNLREDLSHREED
NLKMEDKITSLYLNILDLKEQKKTKSPRGLSRSTIL
>LEPBI_I2474 Putative transcriptional regulator, TetR family
MVIKKKNQKLKKQLSKDVLVQTAISFADKNGIDSLSMRNLAQLLGVEAMS
LYNHIQNKDELIDGMVESCVILFSLPKVKGQWKKEMKRRARSVREVLLSH
PWLTILLVSRVNIGESMLRYFNDSIGCLVNAGFTYKQADQIINAIDSHIY
GFTLQELNFPFKPNEYKSKASEYLPMIPKNDLIYFYNLTKEVAMGKYNGK
QNFDFGLDLILDGLKFQSKK
>LEPBI_I2247 Putative helix-turn-helix protein CopG
MNQTVNISFEKALLKEIDKIAKREHRSRSELIREAARAYIEKKSKWQAIF
DFGVKSSEKSNLTENDIFAEIKNVRRSKKAS
>LEPBI_I2676 Transcriptional regulator, CarD family
MATKKLNEKTKEPKFKVGDYVVYPIHGVGEVTEVAKKLILGKKKDCYSLE
IQGSKMKVSIPVDRAMDVGIRSIIDKKEIKKVLTLLKKDEVDTEEDWKVR
YQNNMNKIKSGSIFEVADVCRNLYRRAYGKELSIMERKLYESAYNLVKME
IALSKGVPQEEAGNIVSDVLAASVQGIAPPPPPKELDDDLDLE
>LEPBI_I2136 ATP-dependent RNA helicase
MKFNELPFHESLSKALDKIGYVELTPIQAKSIPFAMEGNDLTGLAQTGTG
KTMAFLLPTLHRLLSAEEEEALPYALVLAPTRELTIQIAEEAKKLLEFTD
LGVATIIGGTDYKSQEQALGNKACIIVATPGRLIDFVKNHGLSLENIKVV
ILDEADRMFDMGFVQDLKYIFHKCKNRKQSLLFSATLSYEVVRLASKYLN
DPIEVHINPEKVITERIDQSLLHLGREEKLPYLVNSLLNYPIEGLGIIFT
NYKMNIPKIVSALRRFGITATGLSSELDQKKRIRLLRDFKAGKYKYLIAT
DVASRGIDIENIDVVYNYDLPQDAENYVHRIGRTARAGRKGQSIGFCSET
DYTELERIEKYLNSKIPVAEIREEYLEFPKGEFTPVFADEVIPGEKKYQD
RERGGRGGKPRQGERGERGSGEHRSGDRNRHKGKTGGGHPPAKMSHPGGH
PHQTGPEHKHPAKMTHHELKHGHQPKEGKGKPHNRKNEQKKSFQKNDPRR
NLFDINEVKQSKKQKQSIWKSILSFFKKD
>LEPBI_I0094 Putative two-component response regulator
MINLLAVDDEMINLMIIDESLSDKGFTVVKAKDGEEAFQILSSGVMLFHA
IILDRLMPKMDGIELLKKIKRSEKYRDIPVIFQTAMSSITDMTEGLDAGA
FYYLTKPYSRALLVRIVQTAVEHFIKLQRAKEDLHKGMGALRHMVSGEFR
IRSIRESHELAPLLANACPDPERVLTGIMEILNNAIEHGNLGISYQEKSE
LHDNDKLMEEIFRRLDTPEYKDKFVKVSFERNEERIEIRISDQGKGFDWK
RFLSIEAMTKNAFKTHGRGIFMAKKLSFDDLTYIDEGRTAIIRIDLTNKT
SNLLTDFQE
>LEPBI_I0419 Hypothetical protein
MNLTEIAHNNGFFDQSHFNKELKLFTGKSPKTFFERKQIW
>LEPBI_I0324 Putative phosphoserine phosphatase
MYERENNLSIHTNPFPEILDDTTYNRILKDPNYWISQSLEDKIIQQISLS
LDISGILYHVGTEALITNAYDLLPLDDSRIDLVEMIHRLPILIGRLTRAV
YLNVKPISDQHFKFVFVYLPEYQEKWYDAVFFQGMLNGLALLFELKEFQI
RMTKTKLFGIHVSHKELGEGIQFGSDANEYELEWSDDNLYLSRSHLTKEN
VSSRHRVMVTSRSETELEEMSIVDVRDVVGKSRELAIENRDLEAAVEVLK
SFKQELEKKQHSMAKDLRLAKNIQKGLIPEIIPDWNGIQFWTGFSPMQEV
SGDYYDYFPYQTDKLGVAVCDVSGHGVPAAFITALSKMLFSNFKKPKPSE
TFKLINRELLDLVKQQGYTTCVYLLIHSDYKVSYSIAGHPRPILFRHQTG
KAEVCEGDGTFLGMFPDAGDTYRDFYLQLEPGDKLFLYTDGLTEAENDHG
HAFGETKLIQLIEENANASIQETVELIMNHHREFTMGTDAMDDITLLGLQ
LSPKLEEFNVIKSEGDKAYHSKDYPSAVVSYEKAHQILPRELNTQLNYGK
ALAYSGDFEKAISMLESYNKFKTNHFKSHAILGYCYYQMEQYEKAELEWK
KAYSINDSNLSNLYNLAQLYRKLNQKQKMKDVIDKMKHIEFTYLHILPLE
KKWESLPNEIN
>LEPBI_I0887 Putative transcriptional regulator, TetR family
MPQTLRSQTNPKGLKRIPKREETKQKIYRTALVLFQRDGYEVTTMRRIAK
EAKVSLGLTYYHFQSKEDLVLEFYKGSQKELKRLCESYFKTTKDFKTRYK
FIITTQLDLFFSHKKFLQVLARHAGDPNDPLSPFSIESEGLREEAVGIIR
QAMATSNSKLREDLSKVLPDLLWMQQMGILFYWLTDASKSFQNTKLMIHD
SLDLTFKLIKLSNFPLFKNVMGPIFRMVRLVKT
>LEPBI_I0366 Putative acetyltransferase
MKIRQANYLDISKLAELFDLYRQFYGQQSNLTEASRYLLNRMEHGQSIVF
LVEDPKTGNFLGFTQLYPVFSSISMQRSYILNDLYVRSENRKQGIAKLLL
DEAKSFTKHFQGKGLELSTASLNKDARSLYEKQGFVQETEFLTYFWKST
>LEPBI_I1549 Two-component response regulator
MIQNTKPKILVIDDEATNLQILNEILKNDYSLSFAKDANKGWELAFSESP
DLILLDVMMPEKTGYDLIKQLKENKKTQFIPVIFVTALTDVGDEEKGFHL
GAVDYITKPVSPAIVKARVKTHLSLVDSTEVKITRLQIIQRLGMASEYKD
NETGMHVIRMSHYSKTLALAIGFSAEGADEILNAAPMHDVGKIGIPDSII
QKPGKLTEEEWNIMKRHPEIGAEIIGDHHSRLLKLAKSIALTHHEKYDGS
GYPYQLKGENIPLEGRIISIADVFDALTTIRPYKKAWEVEDALGYLQKES
GTHFDPKLVNEFLKVLPKILEIKAEWPEEIQKK
>LEPBI_I2737 Putative transcriptional regulator, AraC family
MDILFFKPPAHLQTYVKEFWVWREVTANQLPWILPSYECEMVFHLGDPPI
VETESGETFPLPKSHLVGPQTRRWRVLSESKLTLVSIRFYVAGFFSLFSK
NGMEIKNQFLEIASNNCLDHIFQNPILEEKKLIECLSEYLQNYPGSPSEI
PAYLRFALFALTNPKTNINPLAQKLGISRKQLERKFQEVVGLNPSEYRSV
HRVLSLVRNPEHYQTNNPDLRLTDLAQIFEYTDQSHFNHDFKRNSGSIPK
EWFAEYEKMSHFYKQNTADE
>LEPBI_I0926 Putative phosphoserine phosphatase RsbU (Sigma factor SigB regulation protein RsbU)
MTRSFYIYFKEIFHKPTRQEWDILKLAEPRFEKEYTYSVFLTHFIVYSLL
FVPPFADFRWDILPYLLGVTIIRFVLLLQFYTKSISLEKVIYLSGIIADG
LVYIVFIKGIQSFPSIGNFYLLNSYLMSFIIPILLYSTRLNPFGCVLSAI
YFSIFHFSYILNLPIELQNQTSLFSQYFLIIVYWGSALLGVVFVFNKRKD
TADVYSLSEEKRFMLQELELAKKVQDALFPGNIKIPNLTFTFYRKSPNVI
GGDFFDFVQLREGNVGVFLTDVAGHGISSAMVASIMKVLVSTIPYRFKTA
PARLMDYLDDRLTQDLNRYHASAIYLFFDFIEKKLTIGNAGHPYLILAKK
GEEFQELETQGAILGFNIKVPPISEKTLPIAQGDRFFIYTDGLIESMDHQ
GNCLGTEGLLDLLNRHKHCENVKELETQLLDELKTKYGLDTFSDDTMFLI
LEVEE
>LEPBI_I3002 Putative transcriptional regulator, TetR family
MSRAQVIERSPKKRAVLEKDKLSKRTSIIQAAATLLQKKDWAELSMDEVA
KRAKIAKGTLYLYFPTKEDLCLRIHSADYESWFMDLNEFLINTPKMNADI
FSNWFVNSMDRHSRFLKLLPIVPTILEKNASIQTIREFKTNLKNQITSVL
PLIIQYFPFLTEQSGFLFLMQCHALAVGSWSHGFPSNQVKEAVKDTELEM
FVLDYKKFLEISILNLLKGHSSPQTQTI
>LEPBI_p0010 Putative phosphoserine phosphatase; putative membrane protein
MIQRDLLFNLWLLIVFLSITSCTSKLPERPIIQYSFQNLTLEQVLSEDVV
WSKPEEMKYNFGYWKRYVWVKFELINHSESPSQYILDIESPWVDEVILAW
KSLATVNTIEYRGSDSHTLKEIPHRNPVFSLDLSPNEKRIVYLKITNVGI
LSAPLRIWTRNSFFDRVERDYIANGIYFGIIFALLLYNLLIFVSVKEKAY
LFYCLYLTTLLINYALLGGFFKQLLIPESYLNIKPYLYTSVNASLLFVGL
FSLTFLNLKSLNPKLDRLILGSAVTIGVFSVFSFFIPYHWMEISFIYTFP
YFLLLLVSSGIYSYWKGVKSSQFFVLAWVTLFVGVIVDSLTKASILPTTT
FGRYGVQIGTAFEVILFSLALGRRLRFLLEENISSQNQLTTIRKDLETAR
RIQMRILPAEVPKSHQFSAIVSYLPLYDIGGDFYDYFDSNENELGIVIAD
VTGHGVSAALDSSTVKIAFRNAKGFMHSPKQLMAEMNRFLCTSLNARFVS
AAYFYFDFDQMKLTFSSAGNPPLILIRDREVQSVECPGLLLGVKPDFSYE
QNEILLKKGDRLLIFTDGLYENLKPNEDMYSILFPEIRPIVGLAHHDFHQ
KLLERLSSVRTILKDDITFISLDIV
>LEPBI_I2799 Hypothetical protein; putative membrane protein
MLGSILISAGLIQSIFLGFYFGLQEKSKNISSRYLGFFFLFLAMFMACNL
VYFTGNIIEYPHLMKVGYLFGFCIAPSFSVSVVRYFGIPKEKAIWNPIYL
IVPILFLLYETPFYLSNAEDKIKILSDIATNDFFSELNIIQMMILGYSFF
IFLRLYFRFQIEMKHFAKDIHWEGKIFYQYLLYLIIWLLFCILVCVILPG
KISETISNLGISIWILGFAWHRIYLDKNIMNHLQIQKQDPSKYQKSYIPE
KQMLELGKHLETIVNNKDYLFNGDLNLANIANTLGLSNHSTSQVCNRFFG
KSLIDVIQEKRIEHAKIALLDTKKTVLRIGFDVGFNSKNSFIRAFKEVTK
LTPTEYRNQNKS
>LEPBI_I0430 Putative transcriptional regulator, ArsR family
MEKKAEIFAALGDPTRLSLVEKLTDKEPYSISSLSKDAEISRQAITKHLT
VLEDVGLVSKLKQGRERLYVLNPKPIKALQEYLNIISKEWDSSLSRLKMF
VENSK
>LEPBI_I2879 Putative acetyltransferase
MEPNFKIRQVTTHDSQSQLCMDSLWDEIQTRYEFQAPNPMLFSDFLPPQG
KFFIAEEIGTNVAMGSAAYTKFSDKECELDVVYVFPKFRNKKVATFLLSE
LEQQSKIDGFTTMILRAGKPQEEALHFYKNFGFNEIPKFGKWVSDPTAIC
FEKKIK
>LEPBI_I0208 Putative HTH-type transcriptional regulator, TetR family
MEKKKRVTVPKKAPQPPVMGRKRDPSLDALILNATLEMLAEEGFDGMTMD
QIATKVGTGKAACYRRWPSKVKLVKDALIWMNRNQLELEKIPDTGSLRND
FLAILKPHSMEEANAKLRVLGGLGTFWLDEEIEKKGITEIFGPWTEVNRT
LIQRAMERGEISKKANVELVCKVLNSMATYRALIERKPPDKALFIALIDQ
VVMPALKIPG
>LEPBI_II0090 Putative response regulatory protein
MNSILIGIIEDNLDYLNSLLEVLKPKESVSISTWNSAEDFYSNPPKEELQ
LLILDIGLPGESGIDVLKKYHTIDSRKSIVISSLQTDDVIFSAIKYGASG
YIWKSELDSLWETIQTIVEGGSVISPSIATKVLLAFRKPELNPKPTFPPK
NQTGLEILSPRERQILELIIEGDSPQQIAQLFGTTIGTVRQQIKTIYKKL
QVNTRVQMLKKARLFGIF
>LEPBI_I2218 Putative transcriptional regulator
MRSLKNHLDNKLKSKSFKEKFEEEKELVNISIELQSLREKKGLSQSDLAK
KAHVTQQQLSKIENGINCNLSTFLKVCHALDLEISIKNRKLSA
>LEPBI_I3320 Putative transcriptional regulator, TetR family
MPRTGLTASEIQDRAVEIAIDQIREKGFEKVRLVDVAKGMGISHAALYSH
FQDKTALLDAVSERWLVKLDEQQESLVVEKRDPIQKILTWFLNLHRMKLE
KVKLDPELFKAFDMAAEESKPFIQTHLSNMRKQMSSLVVEAINQKKIKKR
DVNLITEILISAGTAFTHPKLVAQYSAENREPLLLETIEIVLKGLS
>LEPBI_I0118 Conserved hypothetical protein
MGKGEDTKSLILDKAVQMASVQGLEGLTIGSLADELGMSKSGLFAKFASK
ENLQIEVLRVGSELFRRNVVYPALKTKPGLARLKMAFQMWLSWANTESLP
GGCLFLASSSEFDDRPGVVRDHLKKTQLSWQNTLKQFVQDAKDCLELDAN
TNVDKMVQEIWGLILGFHFYNRLLEDKNSEKRTKQSFNELIKRHKYDF
>LEPBI_I1238 Conserved hypothetical protein
MDELAVLPHLFRLEYSKIVSVLCKRYGFHQIETAEDIASETFLVASQAWG
NNGIPEKPVAWLYAVAKNKAKNLIQRDSLYQNKILPRYQIENYVEDHDFD
LSEENVKDSQLRMLFALSHPLIPLESQIGISLKILCGFGIEEIAKVFLSN
KETINKRLSRAKEKLRENNISLELPSSDDLKSRLTSVLRTIYLIFNEGYA
SHNQDKILRKDFCLEAIRLCTFLLENEKTNTPEVNALLSLFCFHISRFDA
RMNDAGEIVLFEDQNRNLWNQEFIQKGEYFFIQSNKDRNISKYHLEAAIA
YWHTLSEDKVDKWETIYTLYTGLLEFESSQILLLNRAYALFRFKGRDEAL
EELGRLDFPSNRYYFSLLGEIYCEFDRKKAKDCFRKAYSMAEKPSDRLAI
QKRMNLME
>LEPBI_I1376 Putative transcriptional regulator
MDPMKIEIFKQTTRQYFETALLMHETIASHVGLSGTDHKYLGYLIENGEM
TAGELAKLSGLTTGAITGVIDRLEKNKLVKRKFLQSDRRKVIIVPNLEKA
NQLFSPIFKKLQKETDLLISSFTSRELEVVHRYFESAIGIMDKMSKNLKE
WNDI
>LEPBI_II0171 Sigma factor SigB regulation protein RsbU; putative phosphoserine phosphatase
MPTKLLTLSLISDITSRINSQEDLNTLLSEIMGITRDVLQTEGSSLLLYD
KENDQLVFNTTSGLKEESLAHLTVPRGKGIAGMVLETLKPEIVNDAANDP
RIFKAIDQKVGYVTRNLICVPMVAQGEVQGVLEAVNSLDNRDFNQTDIKI
LRYLSNLAAIAVKNRLLIDNLNLRANELNCLFQISQALANIQSSDEFMDL
AVKTISEVLQVDRVCLNFEKIEKRGLPRSKSKGFSDQIHDEDVVALLFND
RSDWMYKGFKIITASSPQGMQLTHKGLFQHSMILFPILKNKEWLGSLVVS
DKTSRTRFDEMDIRILRTLTNQVGEAYTALQVKIQSERLKNIDRDMQVAA
MIQKHSLPIIPKQYSLLEFDTYYQASREIGGDFYDMVVHGKDEVSVIIAD
VSGKGTPAALFMEFSKTVLQQEVSKTTSTSEALFNANEILQDKSGFLMFV
TAMLVRINMTKKELTYSSAGHNLQIIYRKKHHKIQHLSGKGQPMGIGKCE
FSEHTVSYLPGDLLVLYTDGVTEAMNLKEELFSEERLESVILSHINDPPE
VIRQAILQKVSEFVGEAEPHDDLSLFIIRLN
>LEPBI_I0743 Putative transcriptional regulator
MAVTKHFNESFERISEEKRTRILSIAISEFANRGFTSANTNTIAQKAGIS
VGSLYKYFETKEDFFLTVVDYGITQLEKTLETVLSMDLDFFGKVEKIVRI
IQNHSRMNQDIIRLYNEMTTESNYELITRLSGELESLSAKCYIDMIDTAK
KEGTIASDVDSNLSAFLLDNLFMTLQFSYATVYYKERMKIYLGDGVFGDD
EGVVQAVMKFIRRALGAR
>LEPBI_p0005 Putative transcriptional regulator, TetR-family
MRKNTYHHGDLKNSIIKSCHKLLQKKGMTDFSLREVAHLSGVSHAAVYRH
FQHKDEVLEILSAIGFDRLASLQKKVAKDKKNPDEYFVKLGLVYIQFALK
NPNYYKLMFQTKREKESKDLKRSKLKSYAVLVHGCRFFLKAKKRKENHRS
FALMSWSLVHGFSNLSLETNFPISEGKRLNQTQIELAETMLRFAT
>LEPBI_I3010 Putative bacterial regulatory protein, LysR family
MTITQLRYIVALDQFKSFAKAAEHCLVAQPTLSLQIQKVEQELGFDLFDR
RKNPIITTKLGKEVVEQAKSTLKEADKLFEIAGQWKDEPAGNISLGIIPT
VSNYLIPSIYKKLQSEFPKVNFRISELPTLTIIEKLESEEIDLGILATPL
KISNVVELPLYYEPFVVYYPKDAKEKSTSVSMKHIEKYPLLVLGEEHCFR
HQSLKICNRNALAKIESGSVETLKRMVDMGIGVTLLPKLAVDKVSERIVP
FQSPEPAREISMVYKKGFYKTKILNKLSNLILNVIPKEYHKKEKFKVIGV
SIGQD
>LEPBI_I3230 Conserved hypothetical protein; putative membrane protein
MRELAITILSSLLFFLILFFSVIGVQNSSKRLPFYHYPSGLIVNIGEENK
SHWGNSILTSDLEKFDSIQDFSNINSYRLNIQSSNGTIYQEDFKLKNVRK
TDVLGVFFSDLFLAFFSLAIAVYFYYSTRDALIFGFFFNFGLIILSNVFV
LAFKNSIFLFILTLYLGSFLQYHLIYRLRGKEINSKWLLPQVLISFIMAM
IASQERYDMILIERIAIVAHAITVLFGSINIIANVFELIRSKPQGEALLK
RLLLVFSIILYVALPSSILFFDGYPWFYVHRSFFIFTYLLFILSFFYGTY
RYTFVPSFVIFTPSIVTLILVGIILGTYIGAIFVLDYILPIRYLKDRWVF
NFIFLFLVTAYLIPLKLKVKEFFDLWFFEKNHKLSAGINKITALLSSPLS
MRKTILTINRTVKETVNVSNLIILIPGDQFANTDLRNIDFMRISPQSEIW
NYFKSTDRVTVTSHLEYGIGLRETLYNFLKGLQVQLAFPAYDSSSNKKNI
QAMILIGEKLDKKYFSIGELKFINEVVKISGMLLENYSLLEDEIQKRKIV
RDIQTASIVDNTLRLILPSEVKGIDYGYISKPAVGISGDYLDIIPVSNTK
MIVLLGDVAGHGLGTGFLVSAIKGIVREQLRNGTSLEGLFREINSFFRAR
YKGNEFMTLLGGIFDSTENVFKYVNAGHLSLIEMRADGQIKLHSKTQRVL
GILETDYHVQELKLLPGTKLFLYSDGISEAFSERDEIFGEDTLIDFLHYN
ADKSVKELPPLLDIRMTQFRGNREQSDDITFIGLSFTPN
>LEPBI_I1070 Putative RNA polymerase sigma-70-like factor
MNDLESFLEWKPYLFSIAYRITGSYVDAEDILQESYLRWLSVNKNIVENP
KSYLGSIVARLAFDLLKKASRKKETYIGPYLPEPIPEKWDGLDEVDEEKM
NFVFLVLLETLNPFERAVLLLRESFDFDFETIGKIIGKTPEYSRKILSRA
KQALKQRKKKFDPDPKFHAKLLMEFSLACAKQDTNSLSKLLKEDVIAYSD
GGGKVHAARIPIPGLSRVITFLKQTTKKAMNTSTVYFGYANGDPMIIGYD
KDGVPKFVQLISVEGNLISNIYTVANPEKLKGFQNMDQLKKLGYIRKPNL
ISFLILDFQNKIKAFLN
>LEPBI_I1546 Hypothetical protein
MSVQKKRSDCPISSSLDIWGDKWSLLIIRDLMHQKQCTYGDFLKSKEGIA
TNILATRLQMLEENGLIQKKEHPENKTKVLYQLTDKGIDLLPVLIEIQIW
AESYFEIPKEIKERIKPFKKDKETVIKKAMKEMKREGST
>LEPBI_I0835 Putative transcriptional regulator, TetR family
MQTPKEHTRKEILQAAREEFIQLGFEKASMRTIAKKAKVSTSNIYNYFEN
KEHLLTEILQPVLSGLEKAFAYVSHPDYFEKRFNDSYEAWKERFHIALNY
VDANRDDFILLLTKAQGSHLEEFPDTVLTRLTKINFEQYNNFKQKNPGYK
GEVDEFVVRNILSFFLNIFVQMVRQGISKQDMLVYQDSFLKFLHFGYKGS
IASDLS
>LEPBI_I3012 Putative two-component response regulator
MEPTPYSVLIIEDEYPARMLMMDYVLNCPELKLAGIAESGDKANTLINEK
KFDLVFMDINLPVVNGMDILRSNHSKSTFFIITTAYSEHAVEAFDLDATD
YLLKPFSFERFRKSVEKALRFLQESKQNNSNENLNKIHLKIQSDSAVFLL
PYPDIQFISANNKSCVIHTTQKDYETPKLLKEIEEKLPTNQFVRIHKGFL
VNLSYVASLRYDKGGSYTIQLKNEDETTLPVGRSYAQSLKEALKL
>LEPBI_I0565 Putative phosphoserine phosphatase RsbU (Sigma factor sigB regulation protein RsbU)
MKKEIVYPGPWMNEESEFERICLLCTEPRVPSGITKAGRFFCQTCQREWI
LEKRKIPRVGKHVLNSDEKTEFLLENLSLFNSSLGLDDLMFRFSELISDR
LKKDKIAIFITNLELGEIKLAHYYTKQKHLQRVIKRITLDYDLSYGILIE
AMAKREPCFYKFSDQTHPFYSFYSKLTGTKSQLVLPILYANIAVGMITID
YEDEDTLDYIEDEEILKIVVGQFAVSLRNSLLFSKSKNQSKHFRSLHTAA
LTLSQLYLNNHNEMIRMILLTLSGIVDSSISCLVEIPPNVTKAKVFKVYR
DLENYELKTLTDSVDINDLNFILQTKEILAVDPSIDVIFQTLGITGKETL
IVPVKLENETICIFILAKEETRFPHEEIEALNAFVSLARITMENSNLYQN
LSNKERLEKEIEIAKEIQSNLLPRNAPEADGFSFGGLMVPARGIGGDYYD
FILSPNRNELFVCIGDVSGKGVAAGLVMATVRTILHSLVRVKDSPWEILN
DINNYLYSSYRDAITPRFMSMILIRWNLISDEVEVSGAGHGNFYHYQLYS
NTVRSIETGGVILGISPDISKFKNETKLYFKAGDTILLYTDGVTEALNAY
EKQYGELSLEESFRNHILLEPKKILENIYLDLKEFVKEQEQHDDITMVAV
RKI
>LEPBI_I2784 Putative transcriptional regulator, MarR family
MGKNFELENSYAYLIYRTVRALRKQFMRLAMEQGFELFPEQWFVLVKIIK
QPGCSQSDLGRDFDDRPSMARALRNMEQKLWIRIVPDPEDRRKHKVYPTK
MGIEIFNTMVPEIEKERTRMYKKLTKEDFKDFKRIIDEIFDQSIG
>LEPBI_I3424 Putative transcriptional regulator
MNPSLLFGKGEFIDFYVDRSIINSANGFVGKKGFDTKQKMIEVMASLLEE
EGYERAGLSELGKETGTPKGSLYFHFPGGKDELTSLAILYSGKQLNDFFL
SVFGNCDSPQQAIKQVFHALEERIVTSNFQKGCPIATTAMETAGKTTIVS
DACKDVYALWIKTFETYLVGSGYTSRLAKTLSLSIFALWEGSLLLSKLQK
SAEPLRMAEKTAESLLKQT
>LEPBI_I3294 Putative protein phosphatase; putative membrane protein
MYLIDRYYYWSEEEILDPESILQEKWIPIPSKSLGFKKKEKEYLYLKFSD
QFIRQLQSPILYSEIALERFKVFQGKEIVYQSDVSDFIYPHLIPLNSDPK
GSIYIQFQSIYEGYIGIDHDVIFKNHSQALIDLFMENFSKTFFAPILLVL
SFIFMGFYFLRRKEMIFLNFSILLLSASLIEALNGFVGFSLRQYAYYIVP
LTFLNFTFFPFALLLFLISVFPPFFRNLFKFIATLHVIVFFVSIFRNYEN
GISFLNSEEGYNWIVVLEAFVAIFASVYVFMKGNRKLREIIIGILIIVVA
GLHDTLVDLEVIHQQIRIIHYGFFLMLGFFGYYVFKHYLELLHSINRMNA
ELRTKNKELQRLIQIDKDLALAHALQKSLLSSKYNEDDKIRIIGFSQNLE
SVGGDYFDHTKDSMGNWAFLIADVSGHGISSAMVAAMSKMAFVGAGPYLQ
FPARVFHLMNRHLVGKTKNLFITASYLFIDTESYTITFSNAGHPSFFLIR
NSEKEVQQLTAKGKPLGLFSHQAYAEETINIQPKDKILLYTDGIFDLLNA
EGESFGEERLKSLLWEYRFHSLQDLSSILQDTLFRFSNGWRHQMDDLSFL
MVEIK
>LEPBI_p0047 Putative transcriptional regulator, TetR family
MKEKITNQALRMLKKEGLKSLSMRKLAEHLSIDPMTIYYYFKNKDQLMAE
LVEVVFRKFYESLRLDEGIGNENPQKKLEFVLIEYRSFFIQYLDLSLYLI
QSPRQEYPAVTMFNDRILDLILALKPYENPELTRDILVDFIHGNALSVSK
GARTRSNVIANQNLTDQFKESFKILFNRLFYNTRLA
>LEPBI_I0182 Putative response regulator, LuxR family
MKKQVYIVDDHPLVVDALQNLIAKSEDLECIGSADNIEKAFNDIEQMQPT
LVLIDIQLKQNQNGLQLLKRLRTTFPNIAVIIISMLTDDTFVDRAFKLGA
MGYVFKEDTTTQIVEAIHTVLKGDYFVSSSQATRLLGHLYRASQKDEKDP
IDRLSNRELEVFLMIGEGMPVKEIAANMGLAPSTIETLRSRIKSKLSITE
NEKLIRVAVEWKYTQAKTDIVVS
>LEPBI_I2995 Hypothetical protein
MIEDPHSSLLEDCLKGKTKALEGLIQFFQPKIFSLALKFLWNPEDAEDAT
QEILVKVITNLGGFRRDSKLSTWIYKIASNHLINVKKSKIEMKQIHFRSI
REELHKTQSPYPIQASIDTQTLTEEESTSKVSHMVLHVQVACTYAMLQGL
TRKYRMAYILGDVFSISSEEGGMVMGVRPDSFRQLLSRARNQMEVFLGRE
CNLTNRNNPCQCKNRIRYATKVGRIKSYLNLSEQMKKDGRWNEIKPLLPE
TIKIRKAAEIFRNQPTFLPKKNQLESIRTLLDNSFPFSAR
>LEPBI_I2515 Putative two-component response regulator
MKILILEDEPVHAKFLTKLLNIVLESSIKEIKHVTSIDEADKELKSSPID
LLFLDLNIFGFDGFDILERIPTIFTNTIVVSANTDNAIRAFEYGVIDFIP
KPISEERLRLALERHSLFAITYQKGGDQQKNVKSRLLQVDLDRVQNRLLH
LMEIEKIYLNEDLTLEVLAEELELHPRQLSEFLNGKKQTTFNSFLHSYRI
KEAKVLLLKYPEKNVSDIGFEVGYKSLSSFYEAFKKELKITASEFRQKNS
ISETT
>LEPBI_I0536 Putative phosphoserine phosphatase
MKLQSLQDRFKLDDEVLKISRICLVVFSSFIGFGIFAPVDELGLYDPRWI
RIIHASITISFFIATYFVDWVRKNIQSIMLVFFYTMSAHSLILLYWNSLY
IGYLVGMILVLSCIGVSFVDRRSMVSYLASVTSAGILVGIYTKEHQVDLS
LYLSAIITPSLVSYLTLNIRLSSVEKLRISESQLKKFQDRMLNELELANE
TQSNLVTTDWPKTKGIKFYSFFQSFDQVGGDAISYLQREDGKMALFFADV
SGHGIASAMVSAMAVLAFKIHGNTNEPSECLKAIHDELQSLVPNNHISAC
VLFVDLETKEIKYSIAGHPPIILIQKESGPKFLEGLGTLIVSFLKPSLKN
YQITPESGDRILLYSDGILEVFDESGEIYGEEHLFSSIKNHSDKKGDDFL
NVIYEDSMSFSAKRISDDMSMLLLEIQ
>LEPBI_I0127 Putative HTH-type transcriptional regulator
MQKLVNEIAELCCSATTKPTLTGIPRVLMIQGEVPEHQLAAVYEPLVGLV
VQGGKTISIGRQMVPMEGPSYFVIPTEMPATGSVRQAKNGRPYLSVALQL
DQKVLLDLLKDTPNTVAFKNDTDEFSACPATPEFLEVWLRMLRLMKTPEH
IAALAPAYEREILYHVLIGPEGWRLRQLFQSHQKGSSIHQSIQWVRQHFT
HSFEIEDLANKACMGITTFHRQFKSITGLSPIQFQKQLRLLEARKLLTYS
GYSVTDAALDVGYESTSQFNREYTRFFGASPARDTKRLKNDSNFH
>LEPBI_I2488 Putative transcriptional regulator
MTTILMHVTKRKIPIELKYVAKDLYIYESKNSKKEILTFFADGFPGLVFF
HSHSQVKVIVGELSKVMEPVFLYGQTLEPIQIEIEGPFFFVMVQLFPSFV
EETLEIPISELTNSCWTIKKEEWQSESGFESSIQKHSSEMAADAILQFVK
SKAKKFSPDLTLHNCIETILESNGSCEIQNIANELGISERTLQRKFQKSV
GLTPKQFATIIRFHTSLHGLNEDKNIKLTDIAYENGYSDQSHFIRQFKSF
TKEKPFQFREKKGNMSGSSNF
>LEPBI_I2482 Putative transcriptional regulator, TetR family
MVAKKQKGKPKKIPRVGRPNKLNSVNVREALIQAGVALLETTSLEEISLR
KVAAKAGVSHVASYHHFENKHALFSEIAEIGFQKYFATYQLELEKTEKDF
KGRYRALGWTYFQFIMNNRQFARIMFGGMGVESNLHPTLSSVSRRTYRQL
HEIIRMGQNLGYLEKGQTREKTLASWAMIHGIAMLFLEGRLQMKNDLNEM
EKFIQTVTEYAYNGMKS
>LEPBI_I3106 Putative transcriptional regulator, TetR family
MKPGIRDTKKQITHTNLLESALELMGEEKGLGDLSLREVTAKAGIVPAAF
YRHFKSMEELGLHLVEECGNRIQMIVGDARTKGAYRSALQLTIGYFFDYV
TTHRSRFRFIARERTGGNRKIREKIREAMGRIAGELAKDMRMPKSLSKDD
TLFASELIVSLCFQMASDYLDLDPEEHFEMRKLKVKTIKQVRLVFIGTIR
GRKHKHRSSHKAMG
>LEPBI_I3045 Hypothetical protein
MLVGLTESIDEFIHEKPIPLQPNDIILLYTDGATEAENPKREQFGSDRLI
ESLEKHADLPTTDEILAAIFQDIYVFIDGMDVYDDITIMIMRKRG
>LEPBI_p0002 Putative chromosome partitioning protein ParB
MKNKTNFNPADILSKASNRTSSLNPFLSSENAAQHQTIDIPIDLIITENN
PRKTFNETSIRELADSISQYGLLQPIVVRKKAGKYELINGERRYRAHKLL
KSKTIPAVVKNVEQIDITKLPEIKLVENLQREDLSESDLALSLQELKNRH
KETNEQLAKRISKSAQWVKTKIAHAEILKETSLNSNVDKSHPIYQIPTSL
FTEIAPLDVSNRKKAIDYLIKGLEKKGDFPSRNDLREYVRPLKPTKQTKA
KPKLSQLELKDLKSKLAKIKEKISVLQNEKAILEETIRKYKK
>LEPBI_I3147 Putative transcriptional regulator, TetR family
MGDIILHMYNQKDRISETYENLIQTFHDLFVSTAYEKISIEQIAKRAGMT
RVNFYHYFVDKEDILYRTYLFFYRKMESETPKIDPITLLADGRSLTFYGL
ENVKSNRQFYKMLFQESIPASVTYRILDFMSEESFRTHEPLRKRYKVEFP
PYQFVNQYLAGAFWNLIRNLVISDSDYDSELVSQFFKKMATEGLRSFLDS
GIQSQI
>LEPBI_I3226 Putative response regulator receiver, transcriptional regulatory protein (C-terminal)
MKILIVDDEEDIAGLIQFHLEEEGFQTEVCHNGMEVLPRLEKNLPDGIIL
DLMLPGIGGMDLCKRIKEKYPQIPILMVTAKTGETDVVLGLELGADDYIR
KPFNIRELVARVRSVTRRTTDPSQEVQGTITTGKIQINPTAHKVFVEGTE
IDLTLIEFKLLQLFAGNPGVAFSRDKLLDRIWGKDVFVTDRTVDVNIKRL
RDKLLSEKERLETIRGVGYRFRDA
>LEPBI_I3223 Putative RNA polymerase sigma factor
MLMNRYQGMVHSQARKAFLSEEEAEDFTQDVFIKAYESLSLFRGEAQFST
WLFQIAKFRLTKVNKKKSHIFTDWSEDVATVADKSKPSVVDILDKEETHL
TLHSLIAKLPKSYQLPIRLHYFENKPLKEIANDLNIKLGTIKSHISRGKD
LLRKWWSHEIEG
>LEPBI_I1104 Putative transcriptional regulator, TetR family
MSLKPKEKILESSFALFREKGFQATGIAEILERAGAYKKTLYDHFKSKDD
IGFEYLNYLSEQQRIVMLKVLGKANDLSDFIEKWVNFIVRNQRNTSRKDC
PIALFSGEISHLNQFDTYRNRAVQHVLETVEFCILKFEPNLRSDLVKSLS
YELYMSYLGGLRLYALTKDRKVIERMKSQMIHSAQRLIKA
>LEPBI_II0101 Hypothetical protein
MKTNREEDLILIEKARTGDRRALETLLKGVQSWIYNVIRRILLNPEEAED
ATQEVLFKLATNLAAYDPNRASFKTWTYRITVNYALNAKRGKLEELTTGF
SSYANELKQMPDIEVPTDELSNPENKILVEEAKASCTLGMLLCLDREQRI
SLLMADIMGLSDKESAEIIGISHDAFRKRLSRARQDLYKFMDDKCGLINT
SNPCRCSKKMKSFQNHGWIDAKNPRFSAPHVQRVKEQIKNLECEDEDFQR
REYQEIFRDHPYFETPSKILEELLVKYSPTY
>LEPBI_I2871 arsR1, Arsenical resistance operon repressor
MNKKSEFPESIQSFASYAKLLSHPARIAIMEVLATRQTCVCGEIVEILPL
AQSTVSQHLKELKEGGLVKGTVEGTSSCYCIDWENFNQMSDEFSKCINGI
KEYQKENGSCC
>LEPBI_I2885 arsR2, Arsenical resistance operon repressor
MQTLDSTFSALADPTRRAILMLLAKKDLTVMELAKPFNMSQPAISKHLKV
LEQAGLVSTTIRAQERPRRLETAPLKTAIDWIETYRQIWEKRYLALDGLL
EELQTMQTKGKGKRKK
>LEPBI_I3345 arsR3, Arsenical resistance operon repressor, transcriptional regulator, ArsR family
MVKLLESEETLNATFQALADPTRRKILMQLVSGEATVLELAEPFQMSLPG
ISKHIKVLERAGLIERGKSAQFRPCRLKVEALAEANQWLEQYKQLWEERF
DRLDQYLMELQQSKGKEKNV
>LEPBI_I0395 creB, Transcriptional regulatory protein CreB
MIKILLIEDEPGIQETIQIALEAEGFSLSIAPTGIQGLQMLADDISLILL
DIGLPDQSGFEVLKSIRKAASIPVIFLTARSSEIDKVLGLEIGADDYIVK
PFSPRELLARIRAILRRTQNPLVLEQKSNQKLRISLDKKLVYYNGKNLNL
SPYEYKTMELFFKWPGRIFTREEIMDSVWTEPEDSFDRAVDTVIKNIRAR
FKEMDPNFDPIETRRGQGYGLKETI
>LEPBI_I2741 cueR, Transcriptional activator/repressor,heavy-metal dependent, MerR family
MNIGELSKSSGVTTKLIRHYESIGLIPKTRRTDNGYRLYSEDDVHYVRFI
KRSRELGFSLEDIKSLIGLWKNKSRSSKQVKQLAEKHLEELNLKLKQIKD
MTDTLKHLVNHCHGDHRPDCPILKKLETEA
>LEPBI_II0208 deaD, ATP-dependent RNA helicase, DEAD-box family (DeaD)
MYPISMTKNDTEVGNDFQSFGLRPEILQGITEAGFESPSPIQKQAIPLVL
EGKDLIAQAQTGTGKTAAYGLPCLNRIKVEDGMQVLVLTPTRELALQVSD
ELFKLGKHLGIKTTTIYGGSSYSKQITQVAKGAQVAVATPGRLLDLLKGK
ELKNFKPSMVILDEADEMLDMGFMDDIESIFNLLPTKRQTLLFSATMPEP
IKKLASKYQTHPAHVKIAATEKSSKNIEQVYYIIDEAEREIAVVRILDYE
NPFKAIIFTKTKKEADDLKSTLSFKGYPVEALHGDLNQKQREQVLKSLHD
GRVKILVATDVAARGLDVKDLSLVINYHLPFDSESYTHRIGRTGRAGKSG
KAVTLVTTRESRALLRLKGTSGTNLTIAALPTKKEVHLSREEDFLKKVVD
TEIHADAEAVLEKLLKLEDKRSIALKLLSKMLDNTKISGPEKIGKTPAEW
SEMPPGGGSGGRRRRDDGGGSGGGRGGYRGARSNSDRSERSDRGDRKERG
GESSSRRASTPASKKEGGVYVKAAGKKTQRFRNK
>LEPBI_I0946 fliA, RNA polymerase sigma factor for flagellar operon
MSRLLDKYNQFDETDLWKQYRVKKDAEIRSYLVEKYSPLVKHVAGRIAIG
MPQNVEFEDLVSYGVFGLLDAIEKFDPSREIKFKTYAMTRIRGSIFDELR
SVDWIPRSIRQKAKQLENIIAMLENKEGKKVDDEEIAKELGVSMEEYNSL
LAKLSGTSLVSLNDIWFLGDENDEVSFMETLESPMNMNPDNIIEKEEIKN
VIVEAIQSLPEKEKKVIVLYYYEDLTLKEIGEVLEVTESRISQLHTKAVA
RLRSKLSKVKSAIQKR
>LEPBI_I1496 gclK, Glucokinase (Glucose kinase)
MRQAIGVDIGGGSIRVSLFDENGSELDSHHTKTPEHLDNDSFLEVLVESI
RPLVKNIIGIGVGSPGPLNNETGVMLTSANMAGLKNLPIKSVLQKEFSLP
VFYENDANCAALGEAIFGTYKNTESQLILTLGTGIGGGFVKQGKLYTGYL
GNGIEIGHTTSVIGGALCGCGVHGCVESYFSTKGFLNRYFEKTNTKLPNA
EAFFSLVRSNDSESKSILEFGTKALAHAVRNAIQLLNPEAVIFVGGITKS
YDLFGALLEKEIRSTIFSVLNDRLLLGPGGNISGTLGAASLVFVKEKN
>LEPBI_I2333 greA, Transcriptional elongation factor, GreA/GreB family
MPETITEDKSNKIADNDKLTPLFNEEIYVRADAGTVPVSKFKIFDDVIDA
YKAENRLAEAKQKIEDHFKEHPESISAKYMLMIISFMEDSMGDANLVKNI
LDSFKAHAKWTIIEYITDSILRFGDHRLALRVKAEALDKLKKNKELKVVL
EKLAKQDRKNPEIAKKYGFSIMEEDKPKAMSYLKLAVEMYAKNKEYVPME
EIWPTIVQNNYEDVSFFDKIERILLGQREKTRLVGLLYPIVEPFKAMEDW
DHVIYFLKKILEHEPASQKARNELIRSYKQKYVAHSLLEDFLKMSELGNN
RKPVKLCITNFERNIVFDTGNYVMHRNWGVGKITSISQTGDSIFVDFEEK
KDHKLSIQMAITSLKPLKKDHIWVQHFEDRQGINTMFAENLPEFLKQLLK
SYDNRMIIGDMKNELIGTFLKQEEWSKWWAKVKSVLKKEANIGMNPKKKD
EVVYHEKPITHSETLTQKFQASNDANKKLEIAMEAVRDSDEAAEAGEFFI
SHYVEEESARDIIRKISAYLYLEEAGKAWPTEEFSHKIREPELKTLIQTL
TKEDALKISKALENTDIKKGFKDLIRSHHPEAINILIGLLFEVPVKVNRS
VFQNLVADEKYAELNLFFETVCNKSKENPEVFLWVAKSILSHTWKFDWLK
VSEEDLVLRVFRILKPLAKIEDKGTKLKNQAMDILFGKDNSLLRDILTNA
DDEYVRKLFALFKEVPYVTDLEKDQLYALINELKPNIVWDEYDSEEDADD
DPLANLPHDVVLVTRRAFNAKKLEFEHLVNVEMAENSRDIGEAQEKGDLR
ENAEYKAAMEKQAQLQAAIKRLEAELKSARILDLSDVKTEKVGIGTTVRL
KNKQTGESVTYSILGAWDADTEKNIISYQSPLAKSLLGKHTGNEATLVFG
STETVYEVLDIARYSMTGQEA
>LEPBI_I3381 hcrA, Heat-inducible transcription repressor HrcA
MEAMDLSPRHRSILKALVEEFVSDNKPVGSKTLSEKYDIGLSPATIRSCL
AELEDMGFIVARHTSGGRVPTERGYRLYVDSLVTLFELTMREKQRIQEEY
LRMQFRLDQVLIATSKVLASLSQSASVVLGPEGSLDTLKHIELIHVNGGE
VLMILVMRSGTVLNRNIFFDFHISQETLYQISRYLNDNVKGFDVHEIQSN
LIPQMMLKKEGPEGFTLFAPSIARAMGTDSHSVDNLYIDGLKNLYENFKD
EEEQLENILHLFDEKQFLKEFFSDYVPMDGVYTIIGKDGNEKLGGVTIIT
TNYRMGEKRIGSMGIIGPQRMNYNKALPLIEFTSKLVSEMITKLSR
>LEPBI_I3440 hepA, ATP-dependent RNA helicase
MMDIPTQLSLDFETTVEPKQSNEYGFLIDEPELGLAKVTKETPTSVELFF
ESKEIFRTVNKSNRNLHFLNQYPESLRVSEEFPKAMELALTASQLKLTYN
FNKLSSLSNSRTRLLPHQIESTFIVANSLKPRFILADEVGLGKTIEAGLA
VKELMFRRGLKRVLVVAPSPLLVQWQQEMKNKFNEEFAIVRRRNFVTNGP
DHWRNFNKIITSIDFIKNPRYAEEILGTKWDIVVFDEAHRLRRDYSKITR
GYLFAEKIARKTECLLLLTATPFRGKLEELFYLMHLVDPNILGPYHTFIN
DYVVGQKGDLKEKISKVLLRRRKVEVGGFTKRFAKTVRIDLSPIERAFYD
ETTEYVKREYNMAMGTKNRAIGFVMVVFQKLLDSSVIALLSALQKRKFML
ESKFHYMKEHETNLDDWDLDETEGVEDFITELEDEEMSSFQRIKRELFTL
NRLIHLGKQIKEDKKTQKLRETLYRLKKEGHKKFIIFTQFRTTQDHLQSV
LEPDFKVSPFHGSLSMDEKEVAIQKFKEDYEILICTEAGGEGRNLQFANI
LFNYDLPWSPLKIEQRIGRIHRFGQKDNVYIFNFASKDTVAERILEVLTN
KIRLFEESIGASDDLLGTIEEELDFNSSLMKFITGTKTKEELETEFDLRI
QVAQKGFEKLNALVTPKVLDFNLKDYYDHTLEEREWNNQHLEEVVSEGSK
FFQNKLPGSLAVTGKGSYEYKNLEGKVKKATFDSDLALTNDSLEFMAFGH
PFVEKVTELLTHSNVGRKKKYLYSQNLSQKILFVFQVEFDFSLKRKDLFF
IEFDLKKKKSLVVTEKPKEWTEGKTYVPETEIPLSKLEEAFIHCFPIVES
EAEIKKEILRKETLSIFQKEEYKVELSHQKTIRQLEEKLMRQEAAYKWDN
RPEKKAVLHKTMKEIQRAKDEYTVEMRKIKNGAKIFHRIQLFQTYICI
>LEPBI_I1316 lexA, LexA repressor
MKDLTEKQEFVLQYISDTVREKGFPPTIREIGDQFGITAKGAYDHLKAIE
KKGYIRTSKNQSRAIELLKGNADEALLVRASGIPLLGQVAAGAPILAEEN
IEEYIAVPDDLATKPGTFALRVKGDSMVEAGISDGDIAIIQKKDTARNGE
IVVALIENEATLKVFFKEPDMIRLEPRNAKLKPIRTKKATIIGKLIGLYR
IY
>LEPBI_I1823 mfd, Transcription-repair coupling factor (TRCF; ATP-dependent helicase Mfd)
MTKDIQIRPFQAKDVFKEAKETLVNLSGIPESAHSFVTSTLYGNKLTKKT
FVVVLPTNQEAESFCRELLSFLNKEEIYFFPGPENIPYEYTKWQVEWKRD
RILTINQILAGNRSLVVTSVAAFLRKLPEKESLKGKSITLKLGVDFPLEA
LLVELIQLGYHREEVCEQFGHFSLKGGILDIYTPYLTNPVRIDFFGDTVD
EIRTFDPNTQKSIQKIDEVLITAANETIVTKSELEHYHNLLNEYSEKRLP
IDSEIEIIEEHLPLVRKQEGFLDFFPEPPVLIFPKFQETKERSFGMEREY
NTLFEKKKEESLCLPPTELLSFGMEWKSLTSEETPGIQFSLLPSLLNNFS
FDPITEVKGFRGKIREAKEYFLELLALNPGHSIFITSSFSAQMMRLKGLF
SETEVNTIGENSEDPIRFPFESIQPGIHLILSDLKRGFHLVNEGIFVFTD
NDLFGRQYKRKTRYKKQSSQMIESFIDLKEGDYVVHVNHGVGRFVKIERT
KADGKERDFLKLEYAGGDSLFVPLDQISLVQKYIGGTDSPKLDTLGKNSW
KKAKERVQESVDKLAEELVLLYSNRLKLNGFAFPPDTIWQEEFEAAFEFE
ETPDQISAIEAVKLDLESSRPMDRLVCGDVGYGKTEVAIRAAFKVIMAGK
QVMLLTPTTILSLQHFNTFKQRYENYPIKIAFVSRFRSPAEIREDLKNFT
EGKIDMLIGTHAILSSKVKPKNLGLLIIDEEQKFGVTHKESIKKFKNLVD
VLTLTATPIPRTLHMALTGIRELSIISTAPKNRQSVETYVLEEDDTLIQE
AIRKEIERGGQVFYLYNRVESIEEEASYVRSLVPEVSVGILHGQLTEDEI
EETLVEFYERKYDILVTTTIIESGIDMPNVNTLIVKKADMFGLSQLYQIR
GRVGRSDRKAYAYMFYPSKKLMTELAEKRLNTIFEYQELGSGFKVAMRDL
EIRGAGNLLGKEQSGDIMEVGFDLYVKMLEESISRIKGEEVRVEVRTAVN
LKTNFYLPDDYIPDTKQKIEFYKRFEGSANLDEIEELALEMEDRFGELPQ
IANTFVELEKIRTLASNLGFEFVTEKPEEILFKCGTYFRGNPDRVIQAMA
QFKGLLISPSEPSVLRYTNLEKDDLKKIKKLLAILEFLAA
>LEPBI_I1524 nusA, N utilization substance protein A
MATKQATKETGLFEAIQQFCQDKSLDRELVLGVIRDSLLAAYRKKVGLEA
ETDDRCQVEFGSDNKNEIIISVLRDVVAEKTINPLEVSLEDAQKIDPKIE
VGSQIRVFEKPQDLSRVLSSQAKQMVFQRLRDMEKELLYQEYKSKEGELT
HGYFQRWKKDIMSIDLGKVEGIMLKKDQNPGEKYRQGDRLKAIISRVELR
PREPMPVITLSRASGDFVKKLFEMEIPEVYDGIVEIRDVARIPSYRTKVV
VTTSKSDVDPVGACVGMKGVRIQAIVRELGNERIDIVLHSDEPSIFIANA
ISPAKPVEVHVDRKRGDALVIVPDESLSLAIGINGSNVKLVSQLSGFKID
IKTVSQYNQELASPEAREKLDRLFNAQQEAMEESEDGYNQSGQDEEEEDS
GFTPLSEIPGLTPRIVGLLEAGGIKNVETLLEFSQEELSKISGIGKTTAE
QILRLLRESIEWVEEG
>LEPBI_I2139 nusB, N utilization substance protein B-like protein (Protein NusB); L factor
MSSRHRGRSLALMCLYQIDLVGTDPDRAMKFDWYDKKITREEKDYAVFLV
KGVVENRKAIDTLIKKYSENWELSRISVVNRCILRLSILSLQKEPFLAAP
VVINEAVELTKEFETEESAQFINGLLDAFYKKEILPKEPH
>LEPBI_I1977 nusG, Transcription antitermination protein NusG
MGDSLDKKWYVLQTYSGHENKVKTNIEKMVQQQKLEDQIFSVKIPSMEVA
EMKNGKKKVTKKKLMPGYVLVEMNMTDDLRFKIQNLPSVSTFVGGKGKGP
EPLSLDEIKNLFSDVGNVESEEVSRPRFLFKVGETLKIIDGPFANFTGLV
DEIFPDKGRLRVRVEIFGRSTPVELDYLQVKSEQ
>LEPBI_I3473 parB, Chromosome partitioning protein ParB
MALGKGKVLGRGLGNLIPVNENNVEISKEELSGLREIKVSEISPNPHQPR
KQFSDVSIQELSNTIIEHGVIQPIVVQKNPSGSGFILVAGERRLRACKLA
GFAKIPAIVRDLSEADMMELALIENIQRENLNPMDEAYAYQAIIDKRALK
VTDLATRVGKNRATISNLIRLLSLPKPLQDWVKEGKLSEGQARPLLSIPD
SKKQFEVAQKVISESWNVREVENYVSNLLNPDKKSNSSSSVPDKRDVSIV
KLETKLRNKFSSKVEVSHNETNGKGKIVFSYANLSDMERILEQLGVKL
>LEPBI_I2801 rbpA1, RNA-binding protein
MSTNIYVGNLSYEMTETKLNELFSVHGAVSSAKIITDQYTGGSKGFGFIE
MKDRNEADKAISDLNGKNILNREMKVNIAKPKTNNWN
>LEPBI_I1881 rbpA2, RNA binding protein
MVSNKIYVGNLKFSLKEENIRQIFSVYGAIQDLKMIHDRETGNFRGFAFI
TYASPSEAEEAVAQMNGQPIDGRNLKVTFAEDKRKEKQN
>LEPBI_I3127 rbpA3, RNA-binding protein
MSVNIYVGNLSYDMTEGKLSELFGAHGAVTSAKIITDQYSGRSKGFGFIE
MKDGKEADNAIKDLNGKNILNREMKVNIAKPKTNNWR
>LEPBI_I0349 recG, ATP-dependent DNA helicase RecG
MFDVTQSLSNLKGIGPKRKTVLLEHGISTYYELLTYFPRRYLDRNFTKDI
ILKQGDVVTLLGSIVDSYIVHGKKSRLLVGFRTLNNERINLVFFRGVNFF
QKLFAIDKKVVVSGKLEYFRGYQILHPEYEFLSDADDPEDSIHAGRIIPL
YPSTEALKEDGLDSKGLRKLIHQVLEAGTISENLPSKFIKKRKLLGRDEA
FRNIHFPDTMETVQIARKRFAYEEFYYFQRLLLYKQRERQKVKRLLWPLP
KSPSRTNLEKNLPFELTEDQKSAVTTILSKTNSDSPSAFLLQGDVGSGKT
ITALLVGLHYIDNHIQVVFLAPTEILARQHYQTIYKFMGNMPFLGIELLL
GGENKKTRAEKLSRIKTGESNIIIGTHSLLQEDVIFSDLGLVVIDEQHKF
GVDQRETIRAKGKNPDILAMTATPIPRTLCLTLYGDLTLVNIKTKPKGRK
PIDTRWYKEDRRAGVYNSIRKYVSSGRQCYIVYPLVEESEKVDLESCTVA
YENLRTTVFPDLKIGLLHGKMKSVEKESVMEKFKSGEIQILVTTTVVEVG
VDVPNATILVVEHAERFGISQLHQLRGRVGRSDLESFCILMTGDSISEEG
RDRLEALVASNDGYYLAEKDLAIRGPGELLGVKQSGLPEFKIADLVVDRE
LLDEAKEDASSIPLDDPNEVSELRIRFSEGKFLFAN
>LEPBI_I2827 rhlE, ATP-dependent RNA helicase RhlE
MQKQIETFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCA
QTGTGKTAAFALPMIHNLISTRAKPNPKQPRSLVLVPTRELAIQVHESFV
LYGKYTQIRTAVIFGGVGQNPQAKAIASGLDVLIATPGRLVDLMNQNLVS
LKNLEIFVLDEADRMLDMGFIHDIRKIISYLPKRRQNLFFSATMPPEIEK
LANSILVEPIRIDVTPVSSTVELISQSVMYTELADKKNLLLHLFKDKNFK
KTIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFRSGKN
RALVATDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAI
AIAEADERSLIKDIEKVIGISIPVDRDHPYHAARVESHTGKAPKLHGSGG
GGNRGQRRPTQSGDSSSGRNRNSQQNSKQNSNRSQGQSEKRKPSDSGYKS
EPKKSSPSAKKSPRAKKSRYR
>LEPBI_I1032 rho, Transcription termination factor Rho
MASRKQEEIQVNPPEEPTEYTNGIMDQDDAQEPPKQFKKKKNRYEGPIPP
PLDLVELKKKNINELADLAKGLGVENTHGLKKQNLMFALLQAQTEKDGQV
HAAGVMERLPDGYGFLRSPDYNYVPGPDDIYVSPSQIKLFGLRTGDTVTG
LIRPPKEAERFFAMLRVESINGFPVEVAQKRNLFDNLTPLYPSERINMEF
DPSHLDTRVIDLMCPIGKGQRALIVAPPRTGKTVLMQSIANAITRNHPEI
FLIVLLIDERPEEVTDMARHVKGEVVSSTFDEPAQRHVQVAEMVIEKAKR
LVEHGKDVVILLDSITRLARAYNQVVPTSGKILSGGVDSNALHKPKRFFG
AARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMEIHLDRKLADK
RIFPAIDINRSGTRKEELLLPQDTLTRVFILRKVLSPMSITESMELLIEK
MRGAKTNDQFLASMNTN
>LEPBI_I2584 rnc, Ribonuclease III
MSHSIRIKLTPERITSLQELQSITDTSFKDISLLHLAFVHRSFANEDSDR
YLSDNERLEFLGDSVLGILAAEYLYKSLPKGKEGILAKLKSKMVSAPAIA
KLARFYRFPDFLLLGKGEKEKGEANLNLQADCFEAFLGALYLDQGLNSCR
IFLTPHFQTMEKGVESAEETKDYKTILQEYCQKKWKKLPEYILLKEEGPD
HDKDFSVSVSCENYFQSNGDGKNKRRAEQMAAKAALRILKLL
>LEPBI_I0020 rnr, Ribonuclease R
MDTYKIQRKIIEYLDQKSGKDITRQEIKKKFIESSEFKRPDPKTKKVKAF
KRKEKVPRKEIEFLIDQLCNLLEVEGLLIPNKKYLTVAKPFRLTGRISIS
RRGDGFISLPSKNEIFVPGPLTNTAISGDKVEVIPLGVGKKDRLEAEVTK
ILKRGRILYRMRVKEKTNKFVFGNFLDMLGDGKEGVLHVKSILKDSFDAI
NIDDVLIVKLKEGAEPQDNLYDVSFIRFESDTKEDGDLQRILMKYNYDPV
HPDFIPLDFPEEVTEKTVSDWNRRTDLRDLYAVTIDGITAKDFDDAISFV
DEGNRLRIWIHIADVSYYVEKGSALDKEAYERATSVYLANRVVPMLPPIL
SEDLCSLVANTNRLAFTVEMEASKSGEIYNAKFYKSIIKVKKRYTYEMAE
EEIKAQDPNNWMYQVSLFTDALRKHRMKTGRIDLNLRETTITWNERKEPI
GIENRERLTSHILIEELMLSANLKVDEFLRKKKIPTLHRIHEPMDEEKLE
TLNHFLQLNGYNVQIHDTSYPEIMKAVKEIQDNSVGKIFNYLLLRSFMQA
YYGADPLGHWGLGFKDYCHFTSPIRRYPDLIVHRVLQATLLETDKEYSEN
EIAVMGLHCSEEERRAADAERDIVKIKSFRYLESTGIKEFKGFIVGIRPS
QIFVELDISNLEGVLDKSEFTDEFEVMIKNDFSFYSKKYSKIFFIGDPVT
VSLDRIDFEEIKVFLKLKDFKKDDTPTKKK
>LEPBI_I1939 rpoA, DNA-directed RNA polymerase alpha chain
MSPKNLLKGFKRPKKIEFTTDVNTPNYGKFVAEPFERGIGTTIGNSLRRT
LMSSIEGAAISAIRIEGVSHEFSYIEGVAEDVTRIILNLKQVRIKYEPED
KEASKVIHLELKGAGYFRAADLAVDSSIEIMNPDLHIATLNEDANLIMDL
EIQRGRGYVPAEDKKKDIEVLGTIPIDSIFSPIQKVLFEVSETRVAQRSD
YEKLTMEVWTDGSVSPEDAVAQAAKILKDHLTVFINFEEEIEEEEEELDE
ADEKLKAALSKHVEELELSVRSTNVLRSLEIDFIGELVKRSEDEMTKSKH
FSEQSLLELKAKLSSMGLSFGMRDF
>LEPBI_I1972 rpoB, DNA-directed RNA polymerase beta chain (RNAP beta subunit; Transcriptase beta chain) (RNA polymerase beta subunit)
MHTRMQIRNRVNFGKITDLNLLPNLIYVQKKSFDWFLQSEVKDPTKRLNQ
GLEAVFRESFPIESPNNDMVMEYGHYVLGEPKRDPQECKDTDSSFAVPLK
AVIRLIIKDTGEIREQVVYMGDLPVMTDHGTFIINGAERVVVSQLHRSPG
IFFSYDQVRDTFSARVIPYRGSWLEFEMDNKGILVAKIDRKKKFPATLLV
KAMGMGTNEEVLRLFYGSSKMKIAGANPKDLKRLIGRRTIADIINMETGE
VMLDAGSKINEDNISILREMKVKEVDVIEFPKGKDNPVLINCLEKDGVND
YEDAVKKFHTIMRPGEPSTIENAEAELKRLFFSPKTFDLGIVGRYKINSK
FEFNNPKEFSKADDRVLRKQDIIETVRYLVMLMSEAENYYPDDIDHLGNR
RIRSVGELIANQLKLGFSRVERVIKERMTVQEPEQQTPQLLISIKPITAV
INEFFGSSQLSQFMDQTNPLAELTHKRRLNALGPGGLSRDRAGFEVRDVH
YSHYGRMCPIETPEGPNIGLILSMSSFARVNDYGFIETPYRLVKNGKVQK
QVEYLTADKEEYHYMAQSNSTVDEKGEFTSKLISTRHRGDFPFRSPAEIQ
YMDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLTEEAPFVG
TGMEARAAYDAGVCIVAKKDGVVSKVDATGVWIKEDQSKEIVHYPLIKFK
KTNQGTCFNQKPNVSMLHTTTGGKVSKVSKERVEVTTPNGEKETHELLLS
DEVQFHAVVKEGQEVGIGAPVAGQIIKGEKYGDFGQILQKGTVLANGPST
DAGYLALGRNVLVAFMPWEGYNFEDAILISERIIKDDVFSSIHIEEFEIQ
ARETKLGQEQITRDIPNLSDKAFRDLDESGVIRVGAEVKPGDILVGMVTP
KGETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGFEGTVIDIKRYSRETG
DELAAGVEEMVKVYVARKRKLLVGDKMAGRHGNKGVVARVMAQEDMPYME
DGSPVDIVLNPLGVPSRMNLGQIFETQLGFAAKKLGINFETPVFDGASEG
DVNDFCKKAGLPENSKFQLYDGRTGEKFINQVFCGYIYMLKLAHLVDDKI
HARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASHTLQELLTI
KSDDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIIKDSE
GLEVDISDYEDEFSKNKKKIKFETIENV
>LEPBI_I1971 rpoC, DNA-directed RNA polymerase beta' chain
MRNYNSFESITIRLASPERIKEWSFGEVKKPETINYRTLKPERDGLFCEK
IFGTTKDWECYCGKFKSIRYKGVVCDKCGVEVTHSKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLDMTINQLKSVLYFEKYVIIDPADSGRNRGELI
DEDEYHNYLDEYGDKFIAGIGGDAIKELLARIDVDAEARVIRQKIQDKNK
ISDKRIFKRLEVLEAFRDSGNRPEWMVLDVVPVIPPELRPMVQLEGGRFA
TSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVGALFDNSR
RKRTVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KYHQMGLPKKMALELFKPFIMKRLVDLELAPNIKSAKKKIEAEDKEVFDV
LETVVKEHPVLLNRAPTLHRLGIQAFLPVLVEGKAIKLHPLVCHAFNADF
DGDQMAIHVPLAPKAQLETWMLMLSPHNILNPANGQPICGPTQDIVLGIY
YLTSEVKDAKGEGKFFTGLEEVMYAIETKTVEIRSKISVLHEGKIIETTP
GRLIFNQVMPKGYVYINRTLGDKETNKIIADVYEKFGPGITVVMLDEIKR
LGYRYATVFAPTISIDDIRVSPQKEGLVNDANKEVEKADMEYRKGIITNE
ERRKKVIEIWTKTNDRITEGMFKELEKDQAGFNPVYVMAASGARGSKQQI
RQLAGMRGLMAKPSGEIIELAIRSNFREGLGVLEFFISTHGARKGLADTA
LKTADAGYLTRRLVDISQDVIVSEDDCGTKANITLGIVKEGENVIVSLAD
RVFGRYTAEDLVDPVTEKVVFPKDTLITRALGQQIENLGYDKIKVRSPLT
CRSRHGICTKCYGMDMARLVPAEIGEAVGTIAAQSIGQPGTQLTMRTFHV
GGAASATIQEKEHKVPFRSLVKSINGRLVTNANGSKVFARRGTIIVNRLI
QEFNTESLSSVRIVDGQRLEKGEVFASQVGESIEQRITSDQAGTVSLIGT
TLRILGDDIVIPVKIGTILKSEEGQIVEENKALAEFDPYNEVAVSETAGT
IVWEDLEIGKNVRRDVDPKTSNIILKVVEQKKDRLVPKVIVGSDGYSVPV
DALLQFQNGDKVREGDVIFKIPSVAEKTRDITGGLPRVDELFEARRPKDA
CTLAEIDGKIEDKGEIVKEKRILYILPDSPEQEKVKVAIPIGKQIRVRQG
DFVKRGDQLDEGNFDPHDILAIKGPSALHEYLVSEVQEVYRLQGVHINDK
HIEVVVRSMLRKVIITDSGDTSFVNQQQVDKFLFDEENDRVEQEGGSPAQ
GTPVLLGLTKASLNTESYFSAASFQETTKVLTDAAIKGKTDNLMGLKENV
IIGHMIPAGTGMKKYRDIEVFKEMPGDLDWDLDSEEEEEELSELSEAAPV
STATLSKLVAEEDEDEDELEEEADDSDDEDDDD
>LEPBI_I1567 rpoD, RNA polymerase sigma factor rpoD (Sigma-70)
MENLASLPEVQKIISIGKANREVSYDEINEILPDKILNSEKIDDVFTLLH
EMGIEIVEEYSKKSLEESSSLTTTKEETTKETKEKPARKKRESSVSSSSE
DPIRLYLKEIGKVSLISGETEVFLAKRIEKGEKIIEETILSSSILRQNFA
KLIPKIKSKKIKVYDLVKVDKMYALNQEQADKLEKVFFENMELIQQDEKV
LNESTNRIRKYSENSKKFKELKEKIDLSTGKIDEAIRKIGVSQKEIQKIS
QKIKSMVFRVKEIEKHFLKIKAKYGHDVREIKALNRFIEKNENLDEIEKM
MGCDIDEVREVIKDIRNNERKLRRMEQEAGSPVGEIKDWGEKIIKGEREI
AQAKRELVRANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIRAVDKFEYK
KGYKFSTYATWWIRQAITRAISDQARTIRVPVHMIEQVNKVIRETRLFVQ
EFGRDPSNDEIAERLGWPVQKVKAVKNVAREPISLEIPVGSEEDSELGDF
IEDKEVISPLNSAASSILSEQIRQVLQTLPAREQKVIRMRFGLDDGYAQT
LEEVGYQFKVTRERIRQIEAKALRRLRHPSRSKKLKDYID
>LEPBI_I1650 rpoN, RNA polymerase sigma-54 factor
MKLGASLSHRQTQKLVMTQDLRQSIELLSLSTLELSDKIQNELLENPLLD
ELGVDEKTKMPELFSIDEVKRLEKLNHEKSTDVNWQDSYSLEGPRTYDSE
ASDRNQKYIESSTRGETLEEHLLNQLRLIKLTKLEFEIGEVLISMIDDKG
FITDDLTLVAKEMGYPEPKLRRVLQVINELDPIGIGAKDMQETLLIQGRI
LFPENTLLHQLIGEFLSDLEKVDYKKIAKNLKITEEEILSLARLIKKLEP
YPATTYQGRKIDYVVADVVVKEVGNEFNIFINDEWLPKLTIQEEYKELLG
QKLPPKEKEYFQTKYSSAQWLIRSIQQRRQTLQRVVSCIIDFQVDFFRGG
IGFIKPLTLKEVAEKLGLHESTISRITTNKYIQTTWGIFELKWFFSSGVK
SAEGGKESSKKIHEIIRNLVKEEDEQNPLSDQDIVELMEKKGIEIARRTV
AKYRKVLRILPSNERKRISSLKG
>LEPBI_I2388 scpB, Chromosome segregation and condensation protein ScpB
MEERNYTKGLLEALLFLSSDPIKLSALAKSCGIEKTEARELLDELILDYQ
EREGGFLLREIAGGYQFITNQKYSEILSHIFKDKKRETLSRGTLDTLAII
AYKQPITLTELDEIRGVSSRAMVASLMSKKLVKAVGQKEVPGRPTLYGTT
NEFLLHFGLSKLTDLPTPVEVKELKFEDFSPDSIIVTDETEMNPDFDLDS
LPEELKEEKINE


# Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

>LBJ_1787 Transcriptional regulator, HTH domain
MNAVYRVYVFFKDFYFLKVPFLRRKRLNSLSGQAKSNIGGEISDEERKSF
FNQLRAARIEVNLTQAQVSERLGKYQSYISKVESGKKRLFIEDFIRLCEL
YNKPPEYFYSVFSK
>LBJ_2849 Acetyltransferase
MKPTVAEITENYVKLHKALSKLIKASIFNYKSFDFYSNPDSHWFTRAILK
GNPSLSDLSSEIEDLRNKGFHPNILDFLNTITHEISIRELGYNSRNEQVG
MFLKGDPISFNKKSNMELDIRKIRTKKDLKVWLGILNDSFRSDDRENLYL
KLLNQNSFRLYGGFINGQMTTTGMTFYDGKSFGLYSITTDRDHRGFGHAS
ALIEHILGEIRKKFPGFIILHATEMGKGIYEKFGFEKSTLLRHWSIY
>LBJ_1805 Transcriptional regulator
MKNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQSCVK
YLKTTLERLFNEQPVEDVYPEFTEGLTNRLWAKRRELGIKQYDMAKKLKV
STPFLSKVELGLLEPPEDFKNMASKALKMKKEELFLQKVEY
>LBJ_2412 Hypothetical protein
MNFSIILKDLMSRKGWNQEDLAKAGEVKQPTVSRYLSGHTIPTLTFVVNL
YKNEKIDPIIFVRDFELDPIDLGLRKSREEKESLTKEVTVFLRFLKNSPD
ALEIFWKIYKMDQSGRKSMNALAERIIEE
>LBJ_0287 Transcriptional regulator, marR family
MNEFQIENTLGYRINRGAIIMKIELQNRFKNAGFSITPEEWVILNRLWES
DGMNQNEISQKTLKDKTTVTRFLNGMEKDGLIRRVVAEEDRRSRLIFLTD
KGKLLKEKLIPIAKSLLVDSSTEINKEHLTVTMNVLAQIERNISNLKAK
>LBJ_0307 Serine/threonine kinase with GAF domain
MKLQLHGFKTLGYFSVDHQFLIYRSLDQRSGKRVLLKLLRQKKPTIKDIQ
KVYHDFRISNFVKGLRIQNSLELIRHEGIPILVIEDCDSVPLSRLFPNGV
NSIEKFFEIAMGISLALKEIHEKKILHQALRPDNIWVQAKTGIVKITDFS
SATFSDKEISISITPDLPVEILSYISPELTGRLSRIPSFRTDFYSLGVVF
YQMITGILPFISRNGNEILHAHLARKPTPVHIIRKELPITISLVISKLLK
KDPDQRYASIDGLIYDLKLCLQNFQKRGIDSTFIPGSRDIPELIFDSSIL
HGRDKEKAVLESSFNKVLQGDTELVFITGDSGCGKSALAKIFLKSISERG
GIIIQGKFDQYERSIPFGGLMHSLRDLVPILLSKEEKEIRKLKRLINQYI
GDNGKILLDQLPELEFILGPQPELSELPPDENRNRFYYTFHNFIRTLSEM
SRPLVLYMDDLQWADPASLNLIETFFIHSKIKNFLCILSFRPEAVESPNP
FSGILKSIETNKIQKSLITIDSLDKKSVYRLIQDLVPSPEEQIRSVASIL
HKKTLGNPLAIIQLLRTCKKTNIISYEFESQLWKWDLEKVDSLSAADNVV
DFLCDRIKELTPEIQELLGICSCLGEQFTLEFISKLSFFDIPKLNQTLWE
AVKEGLLVPFHNQNQSIFEKSLSSERTFGFSHDRVRQAAYSLLKESKRKK
FHKQAGLTLLAIHGPQPKNRILFEITNHLNQALDQIEEETLRNNLTILNY
KTGLQAKSLGSYESSLQYLNSALKNQEICIKDLEFYSNVILETAETEYLL
NNYERAISLLGLLENLSISNLQYIRANMIRVRLYSKMNKVEKAVSAGLCA
MKRCKIHIPSSRFKINLALFKELFLSLILSKGKSDFELAHLKENSEPEYQ
ALIDLFADLGPSAFTYNQNLFVLLALKIFNISLTKGISRSSPIAYSGYGM
IVNQILKDPNQGIRYSKIAMDLNERIPFDLVKWKVQYVYSAYLCHWKKHI
TPDIKLLDEVHKGALQNGDILYAGFSLQAKIQKKIFSSYPIEELLIHADF
AERYFRTARDNFAFTIAKSSHQLLKALAGKTSSPNSLNDSEFQTENFERK
ILRDKNYTALFYYYHDLTKLHYFSGQFSKALSYGQKGEDLIQNAFGLIPF
AEFWFYYGLTILANFEEFPFSYRIIYSKKLNLIFSYFTQWSKNCPENFMG
LLELLHAERERVRKKTSEAITGYEKAIKLFQEAGFVSFQALSSEIAARFH
YKIGNFSLGNHYIRLAINFYSEWGASAKVIDLKNRFAKRLNPTFYHETTQ
KKLNNPNTSLDQEVVLKTYNVLSEEIVLDNLLKKLIQIAIETAGATRAIY
FHLHNKNLTVYLTGQSGETEIIVENFPEIDETQYPVSYLNYVFRTHRIIS
TRELDSSLIKDFTDPYIKEKKPQSMICIPLLHTGELKGILYLENQLVKGV
FTENNIQTLKLIAGQAAILIENANLYAELETKVEKRTAELNNTINLLQKD
LLYAQKIQDKILPKPEATLDKIYILTKYVPMTQVGGDIYDYAEISPGKVR
IFLADATGHGVQAALVTMLIKSEYESLKYLDLPPGKIISELNQEIIAKYK
TLKSFFSCLVADIDVEQGILSYSAAGHPDQFYLSGNTIIRLPRSGPIIGI
LENTKYNSQFLEISKGNKLFFFSDGMTEEFNPFHEEFGDRRLSESILKQA
SKPVSEIVQFVFEDLQSFLSGQKIQDDITFLSVEIL
>LBJ_0492 RNA-binding protein
MPINIYVGNLSYDLNEGTLGDLFRVHGTVNSVKIITDQYSGKSKGFGFVE
MPNKDEADKAIKDLDGKNVLTRNLKVNVAKPKNDRF
>LBJ_0491 Transcriptional regulator
MLLVVDVGNTNTVFGIFENGKNVPLFHKRTVTRKDRTSDELGLFFRGFLR
EFKIENEAITGGIYSSVVPTLNPILERMFQDWFKIEAIRVHYQMKLPFSI
SYPRPYEIGADRLVNAAACVIDSPGKFIIIDLGTATTFCVVSEKPEYLGG
VIAPGLKVSMDALTRNTSQLPPIVFQSPEKILGDSTIESIQAGFFFGWIG
LLEGIIREIKKDKGQDYRVIGTGGLVTVIDAAHPGIFDKIDPLLTLRGLQ
ILHQMNS
>LBJ_1244 Transcriptional regulator, MarR family
MKEKLSKQSIDTWAAGLKFYTSASSKIESNLTKMKAISLTWYDVLYAVYT
KPKKRSRMSDIAQEIILSKSALTRSVDKLVAEGFLKRERSEEDAREFIIE
ITPSGIQALRDSWPIYEEGIREIFVSKLTPKETSELLRIFRKLNKY
>LBJ_0186 Response regulator
MKNQSGNPGQKVLVVDDEEDIAELIRFHLEENGYQVDTCQNGLEVLPKLE
KNTPDLVILDLMLPGIGGMDLCKKIKEKYSMPIIMVTAKSGETEAVLGLE
LGADDYVRKPFSTRELIARVRSVLRRTKEGEEEEQFEGNITIGNIFLNLK
AHKAFINNFEVDLTLIEYKILNLFMTNPGVAFTRDKLLDRVWGKDIYVTD
RAVDVNIKRLRDKLGDEKERLETIRGIGYRFNEA
>LBJ_2576 Superfamily II DNA and RNA helicase
MKFEELSLHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDIIGLAQTGTG
KTVAFLIPVVHTILTKNIQKVSALVLAPTRELTIQIADEAKKLLKHSDGI
RAVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMVKSGSIDISNVEFFV
LDEADRMLDMGFIQDIRWLLHKCKNRKQTLLFSATLSVEVMRLAYRFLNE
PVEIQINPEKIITERIDQKIVHLGREEKIPYMTNLIVNSKDEGQGIIFTN
YKANIPKIVYTLRKYGIPITGISSELDQKKRLRLLRDFKSGKYRYMVATD
VASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRMGKAIGFCSESD
YVELEKIEKYLKQKIEILEVNEEYIQFPTGKFPPFIGGDSYDREKEVHFK
QNGRRPHDRGDRAPHKHDRDRRGDKRHTSHIHSHSPTRDSHKKKPAAAIQ
EAEFFLQKADSVLSAELKGSKSENKNQHRFQGNKGKQRQQQGGGQQLHKQ
QNRNQNKQHVNQNYDKSKRNLFDINDTVREDTKKKKGSIWQKIKSIFGR
>LBJ_1620 RNA polymerase sigma subunit
MSKKYEKYNQQDETELWKSYRDTKDQDIRSYLVEKYSPLVKHVAGRIAIG
MPQNVEFDDLVSYGVFGLLDAIEKFDPDRLIKFKTYAMTRIRGSIFDELR
SIDWIPRSIRQKAKQLEQIIGMLENKEGQQVDDDAIAKELGISMEEYNSL
LTKISGTSLVSLNDIWFLGDENDEVSFMETLESPMNMNPDTIIEKEEIKN
VIVEAIKTLPEKEKKVIVLYYYEDLTLKEIGEVLEVTESRISQLHTRAVS
RLRSKLGKVKSVISRK
>LBJ_1888 Sigma factor PP2C-like phosphatase
MNLTDYIKSYFQRVGWLLLSINLICLTIAIGFLQTQPFSPKVRIVLYLFI
LIFIYLVNYVSFILFSTEKILPKEKIQETTTKRYRKGDYRMQNYLFPVPI
DDENYEIYGRTLTYNPIGGDFYNFLTDAQENYWIGIGDSVGHGYQAGIFS
MMIFQKMALLVKHDSDPYRVIEDINEDLLKRTEQNPTINSSLYATFLLIK
ADKQGNVEHSGLHPSFVIYKKRTGENRIVETDGKFISTTMNACLKNVQSK
NCFHLESGDIVFCFTDGLYEQKNNGNLYFGESLFRFLEGVPKNHLGKIAD
DLFTEILKHTNGRIQDDMTILMIRKK
>LBJ_2555 Transcriptional regulator, AcrR-family
MFRKDGSPLYPLNRDYKNSRERILEGAAIAFSRSGFHGTSLREISKECGL
EQPSIYHHFHSKENLFRKTLIATHLLVLNEIRRRVIRDQGLHVEVVSIFK
AVAETAKIYPDKTRLPFSLIYSAPVNLQNEYTERYGNQYRKLLEAAFERN
DRIGRKEEKLSLCVDLLYSLILACSVEVLYLDRVSGLEDRVRLILEF
>LBJ_0997 Acetyltransferase
MPKSKTNSGKFQIANLLPEHREAAIELVNQFFRLVNSLTLDGVFRIRPRA
GTKMIDVYLKLRGTGKVLLLGGFLGEELVSLLIARTEDKPYLEEQKILFI
DLAVTKRGKQKTGYMKPLVLACESWAKDQSFQSIELRAIIENENAISFWK
AMGYQPFYIRFRKSV
>LBJ_0893 RNA polymerase sigma subunit
MDSSSTKIEQKQIIPKKPTLREIEIGLLKKIKEGDDEAYIQLVNPFRERL
YRKAVSMVKDGDDAEDIVQDALISGYRSIRNFRADSGVYTWLYRIVVNKS
KDMLAKRKRAKENSMDDKEYQVTDDRVGFEKKIELSDESNYLISKINGLE
DLYKEVIELRYFEEMSYAQIAEVLGTNVGTVKSRLFKAKEFLKHLILQDD
KGEGYFR
>LBJ_2781 RNA polymerase sigma subunit
MNLSKDKTIDLVSRCGDGEEEALRQFFEIYSEDIYNFPMKIFHLSEDDAG
DFFIYAFERLKTGSRFGSFKGKSSFRTWFYSVLRNMLIDWQRTKRELKVT
NLGKISKEGKEYATIEDEPDTRPEMQEEASEFSDRFNQALEEIGVDKRVI
FKLSYIYYLNLNEDEVQYLLEKTGLTPDALKEKILHLRSELSNREEENIR
MEDKITTLYLNILELKEKQQNTAKIAPILPMEVDKTSHTLKKKYEQRKKL
LEKKKKGHFLARTPYREVADLIGISEGNVSVTLLRLIEKIQKKLDFSDLD
F
>LBJ_2868 RNA polymerase sigma subunit
MLEKTSTNQRPFITVAHTSELEKLYNHNKDDLFHYIKKSFYDENSAQDIL
HDSFLNFFRYYEDKSIPDPTSCRMILFRIARNLMINHAKSYYQRNVSLVG
EDASSNFTSKTPSPEFSVLEKIDQSDVKNIIDSLLDIISPEYKEVLLLRY
QQNLKLEEISKILGISISGVSRLIERAEKALAQEGKKIGFQPGNYL
>LBJ_0029 ParB-like protein
MAIKPKALGRGLGNLIPVNENKTPIHFSAEGALREIRISEIRPNPSQPRK
TFSEESLRELSETIKAHGVIQPIVVKQLDVGYEIISGERRYRACKLAGFV
KIPAIVKNVSENQSMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITD
ISTRVGKNRSTISNLIRLLQLPDSVQDLIKNGRISEGHARPLLSLADKKK
IEQLAYQIAEKGLTARQVEDLVSNLTEERSSVPEKKKSRKDVNIVELENK
FRKKYSMKIEISHNQNSGKGKMAIVYPNLEAMEKILNALGL
>LBJ_4239 Transcriptional regulator, AcrR-family
MKSSRSKSNNPQMKDNFVSEVTIRKRNRAATETSILLAAIQVFAKKGYDA
ANTKDIAKLANANEALIFRYFGNKKGLLEAILTRSEDIKQENSLSSRVRK
TSKNYQDLEASIRYLISGKCKDFKDAEDFMKVAVSQIILDPEVSQIIQKK
IYTKALPEFITELEKFKKAGKINPKADLKSAAYAISSFAFALGFMGQCVY
KIPPSEIQATIKEVARIFRKGLEPGPTKKKSK
>LBJ_1688 Serine phosphatase sigma subunit regulator
MDGSRQSEQKGHGDPRYSILFEIDSIIFLDGNFRVILANSATEKTFGYLS
SELIGNSIEHLFSLRIRKRFYRILKNIAELPDKRSQKPFGPIRMIRKDKT
VLISEISVSVTGPEEDYQYHVIIRNISEKHRILMDLKRANESLRKMDREK
EELLEKLEEKVRQRSRLLAGYYKGMKEELNLAKKLQTEILPDIPSVAGIQ
IHSMYLPMMEVGGDLYDLFQIRPGALRVFLADATGHGIQAALLTMTLKGI
LESIKKKDTDPGTILTEFKHEYCRNFGNIGMFFSCFLADIDTVSKKISYA
SGGHSTQFFLSKDLVLGLDRTGSLLGLDSNNRYGVFKFSYQYGDRLFLFT
DGIYEEFNSDKQQFGELAVQNILAKKFSEPMEETIPAILQSLIEHLGSQK
IQDDITAILLALNFPDL
>LBJ_0549 Transcriptional regulator, AcrR-family
MKTRPNKKKESGTGVRERILDTVTSLFYKQGFSNTGMRQIIQESNSVAAS
LYDHYPSKKELGLAYLSRQEEKTLSDLQDLMDRYPDLGEFLRAWVILKEK
QIRHGEFVGCPFAGFASQVMDSDPEYTEFLKDIVTKWTRIISDYLQKAIG
SGQLKRNMDIQYVARRILMAYHGSVTMWRMTKELRFIREMDHSLREIVEE
YRIF
>LBJ_1391 Transcriptional regulator, AcrR-family
MPKIVNHEKYKTEILSKCVDILARRGYSAVSMREIATELDVSTGALYHYF
ATKEDIFKELVKFLLNKDVEEIQLYSKGNLGQALESKVESLFQMIQDRET
YFQNLLYIICDASRLKNHEEEKSLIADAMKEYVNIISKHFGITNPGLSRI
LISMILGTVIQRIVDEDGVNLSDSSEIMKDFLSILLSNSFTF
>LBJ_0638 RNA polymerase sigma subunit
MMTESEFTEIVSSTREIVLSAIEKNLAERFSYAIDDVAQETYFRVYKALK
KDQFRKESKLSTWLYTIARNESLRMNDKLRKEEDFLISHTDLNENSKRLN
SQEMIGTLRALLVKIPDKYRKVLEFYLAGYSESQIAETMGVKPGTVKSRA
FRGKEMIKRVGIKEKFYEK
>LBJ_2523 Transcriptional regulator, PadR family
MTLKEESLEAKGITPAMFHILLSLAEGPQHGYGIGKSIETSSGGNFRLGP
GTLYRTLESIRGFGWIRYSRKKILENDDTRRLYYEITSDGKEILVSELKK
LEVTLKKAKKLKLLGN
>LBJ_0047 RNA polymerase sigma subunit
MVILNDQPQEKIKPDWPDLIRRSFAGNREVLDQLLASLQPFVFNLAQKML
LNPDDAADATQEILLKVVLGLQTYDANKAKFTTWAYAIARNQLLKFRTGK
IEALTGSFDQFAEEIHAVADEVIEARELQNPETQLLVKEANVGCMLGMLL
CLTREQQMVFILGEFFSLKSDVAGEICGVSSENYRQQLSRARKDLYSFMH
NKCGLVNKANPCRCHRKTRGFIKAGYVDPQNIRFAAHHYKNARIFSEEHA
DAMCDLDDEYGQLFRRLPAYDAGRALLTVQNLLNNEQFKDTFKV
>LBJ_0189 RNA polymerase sigma subunit
MRENTPIVCNQEDWDCIQKVLHGDFNSFEILMNRYQGLIYSQAIKAFRNE
TEAEDFTQDIFLKAFESLSTFQGRSQFSTWLFVIARNEIIRRYRREHPEI
SGLDTLLLTESEVEKKNETSSEQETKLLKQEISEKIRSLVESLPELYRKP
IMLHYFENMSYKEISQKLNLKMNTLKSYIFRGKEIMRDWLNKEENEKQE
>LBJ_0182 Serine phosphatase RsbU, regulator of sigma subunit
MRNILLLFISLILLSIVLLIGVLQTSSETLRPPFYYYPNGTIIQSSKEFP
SILGKKVDLLELEIAVKMAESGKSYENGIHIYGKGVSETIPVILAPKSYY
SVIQEFTRDILISLLYLSVAIWFFFYTRDLYMLLLFGSLSCLSLFNFFLV
GFHEFHFLFFFFLYFTAFVILNISFRLRGKELPIRWFAPEVIFSLIAGFV
GRSQKADPHIFGILATNGVYFILFCSIICIFFLVLDSIRNLFPLQSLFKK
LSLIFAFSAISILPFVSVEFSELISPDLSKLLILSAFLIFPALIIYGTFT
YSIVPVQIAFSSSLTSIYLILILAGSYLLLLGAFFKFNPIAADKYLEEFN
ILFLCSSVYTISSINRRLSNLVDTWSFKRNHKLHSAMETISAMISAPISM
RATINSLMKKVSEALDITKILVLIPADKFPRTDLKNINFIRISSNSEIWQ
YFATNTEVTVTTHLAYGLGIRESVYKFLHNSGVQLTYPIFNYSRGKEVSG
VFLVGEKNNRKNFNLGELHFLKECTRMASMLLQNYTLLAEEVEKKRIVRD
LNMASIIDKTLHVAENEHIKEIKIGFFSIPAVGISGDYLDIRKLNSNTML
LALGDVSGHGLGTGYLVSAIRGIIQNQIRKKSDLSTIFKVINSFLIERYR
GSEFMTFICGEYNSQEETFEYINAGHSSPICIRKNGKIELRAETQRVLGV
LPTEYKRLTIPIHPGDKLILFTDGVTETFNDNEEIFGDENFLNLLKNNHQ
LNPQDLTDLVLKTIQDFRGKKDPSDDISFICLEVNEKTHELKGNQLDK
>LBJ_0099 Transcriptional regulator, AcrR-family
MQIVNREKNADPLNPRKEPSRKRSINRVQRILDVVVGLLEKNGVEAITTN
MIAAEASIPIGSLYQYFPNKHAVLNAVGQRHLERINSMLSEIFQSDLTGK
SWEDLVDLVIDSFANFYLTEPGFAPLWSSMKQDFKLQENNLKISENVSTI
LSQFNVNLAENRIISKIIVEVTDAILNLWIREQNNHRIKDHFKILSDSIL
PRRTKLP
>LBJ_2316 Serine phosphatase RsbU, regulator of sigma subunit
MPQTVLESLKLKSILSTSTILNANLDLYQLLPLIMLYSKDLLEADASSLF
LLDETEEFLYCEVALGEKGEIIQKYGRLDIGEGIAGWVAKEKKPIILEDA
YSDSRFNPSWDQKTGYRTRSLVCVPLFIENKIIGTLEILNKTQNRSFNAC
DLNYLTSLSEVAAIAIQNAKIHENLKKRILELSLLYEFEKLIVSEKSIHE
LGSWVLERVLEFLEAKTGTIYIADHTSQTLRILAAKGIPKDAIHTIIVPF
GEGVAGWVAKERKNLLIQNLEEDKRYNLNVKYKFEANSLISSPLIYKDEL
LGVISVNNKKSGFAFHKNDLEMLGAIANRLSMTIKNADLFHKVVNSDREL
QRAREVMSKVIPTTIPYIKGLEVGAEHIPYSNVGGDFYSIFKLDSERTGF
LVADVSGHGLSASVIATVMNTIISTYDKEILSSPSQFFSGLNHALNNKMV
GNFVTAFYCVIDTKKDTILYSNAGHNYPLLLQNSTDSMISLETKGKLIGI
ISDLFFEEKSIHFKIGDRLVLYTDGISEHYSDDRTKRYSEEFISISIHKC
ASKTAQETSAQIISDCIEYCNYSKFSDDVTLLVIDRK
>LBJ_0265 Bi-functional protein, with a transcription regulator domain
MLEKELSPVFKALSDESRRRILDILKNKPGISVGELTDFFEFSRFAVMKH
LKVLLEANLLKIEKKGKFRNIYLNAIPIQMIYNRWISQYSKHWASSLTQL
KYEIEGESRIMEELKQVYTLYIKTNANKLWDTLIQSSITPEWFDGMAVTF
EPKVGAKLTYDIKGQDGNKLSVVEGNVLEFDPQKKLAYTFRLSAEPKATK
DRASRVTYELEPSGPDSVKLTVTHDDFDGKTTTFFGVSQGWPRHLSNLKT
YLETGKGMNLPSMH
>LBJ_0212 Response regulator
MKLLILDSGTTFRKIISSFFPAEDFQIVEAGSAKEGLDLTFRENFDLITI
GMILPDSDGFTICKTIRNDLRENKYNACKNSKIYLVTSGDVESNRTKSME
FGFDGIFPKPSGIEELKLVIKEIIKFSYQKNSIEQRKVGKILIVDDSELN
LLLLGKILERNGYSFQAFTEGKKAYEYLQTSGENISYILTDWIMPGFSGQ
ELVETIRKQEKFDKIPITVITGLEENVGLNISVSQKNVSILQKPYFERKI
LEYIRKV
>LBJ_0352 Receiver component of a two-component response regulator
MKPTNTKIFLVDDHAILREGLKMILSGQFEICGESGDAEKALDQIGKLNP
DLVITDISMPGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGI
NGYVLKDDAGNDLLRAIEAVHKGETYLSPGITAHFLSGFVGSGKPGEENQ
DAKKAFSVLSDREREILKLVAEGNSNESIGKILGISPATVKVHRANIMKK
LNLHKVADLVMYAIRAGLIES
>LBJ_2735 Receiver component of a response regulator
MKVAPTYSILLAEDDENNAELLIRYLERYNFDVDHVIDGVAAEIRLRKTR
YDLILTDNRMPKFDGIDLLERIPEMNEATPIIFLTVSNEKETIIQAAHNK
KLVAYLLKPIDMRVLIEKICQALKIGAGSLIDKKEYPFEIILLNHTQQGV
EIELKGCPYGKNIEKLVQEISLFLKELSKPNSILIKVNPEFFYFKNGTQV
LYALKVRLATKYEIGKEDVIIQTEH
>LBJ_2957 Transcriptional regulator, marR family
MSTKDLFLENQICFPLYACSRALTSLYRPILDQLGLTYPQYLVLLVLWKG
DGCSVKEIGRKLYLDSGTLTPLLKRLEDSELVVRKRSEKDERSVRIFLSL
KGKKLKERAVGIPSKLLEILEVDKKSLIDLKNSLDRLWLILSEKTE
>LBJ_0260 Transcriptional regulator, AcrR-family
MERLSSRERLIQTTAQLLQEKGYYGTGLKDILKLSGTPSGSLYHYFPDGK
EELTAAAIRSAGRRLEKQIETTIENHPDLYRALQEITSRLSQELIDSDFQ
KGCSSIYLKWQNLLSTFLQRSEMKEDQVKPVSILLLAVIEGALVLCRAHR
SIEPLEIVSKQLENILNILT
>LBJ_0275 Transcriptional regulator, AcrR-family
MRSGGDTKEKIVTIARDYFQSVGFQSFSFQDIANDLGIKKASIHYYYPSK
EKLGLEILEAYDKDFKKYIENIRERSPRVRLFGLFKLYVSYAGENGNICP
FGVVGTEYHVLSQTIRDKTLILQNQHRDFLIQTLYDGVKDGSFVLTLSIR
DTADLFISAIQGAMQISRIRKDKEYFPKMIQSLKSMIQMKEHKNAGF
>LBJ_1788 Transcriptional regulator
MIHEVLRLLRVFHDLKAKDLAEKLSISPSYLSEIENGKKEPTLELLNKYS
VVFNMPVSSIFLLSEGTEKQSDKKSFKGSLSKLIINFLHKVEGEENAHSS
R
>LBJ_4245 Response regulator
MKTILVIEDDPDIGNLIRKSLDSAHYSTTLQTSGEEGLKFYKANHPDMVI
LDLSLPDIDGIEVCRTVRRNDENTPIFIVTARNEEIDRIMGLELGADDYI
TKPFSVRELKTRVDVFFRRWDKKAGIKPNVGASGEIIRGALKIDPVRRRV
TLKDNIVNISRKEFDILQLMAASPGKVFSREMILEAVWGMEWDGFERMID
SHVKRIRSKLEKNSAQPEWIETIWGIGYRFTDNYDNIVIPD
>LBJ_4205 RNA polymerase sigma subunit
MTSRKDFMDALYREYSGRIFDFLYKYSSGNPEVAMDLMQDTFLNFFRKYS
DSNVDREQAIRLLYTIARNRSINYSQQFSTVKENGNSEMEDFQEQKLSFV
RKAELKDLEERLLICLDELEENEKYALILRFMEDYSLATIAEIMNISVST
VSRLIVKATAKVTEIAEKKNLKP
>LBJ_1723 Transcriptional regulator
MTSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNRG
IVRNQMGPNGGYVLAKTPSAINLKEIYVAIDEKIFQMHSKSPNKKCICGH
AIQPILSKVYEKAQKVLEDELGSTNLDLIAREILSFSKK
>LBJ_1110 Transcriptional regulator
MDDALRHKLLRILEENPEVNQREISEILGISLGKVNYCLKALMDKGWIKA
KNFKNSNNKFAYAYFLTPMGIEEKARITVRYLKMKIQEYEQIQKEIEELK
KEVGED
>LBJ_1545 Transcriptional regulator, HTH domain
MFKSLHSREAKIFCKNLIAARKSADLTQLEIAKRLGEPQSYISKIESGER
RLDVIEFWRIYKILGKSFEFYFQFDEKPEGSEKRSKTLKAASGKRKKKRS
KF
>LBJ_2791 Transcriptional regulator
MAAKKKNSEIEHKVGDYVVYPIHGVGEILEISKKNILGKKKDCYVLEIQG
SKMKVMIPVDKAEQVRIRPIIDKKEIKKVIALLKKDEVDTEEDWKIRYQN
NLNKIKSGSIYEVGEVCRNLFRRASGKELSIMERKLYESAYNLVKMEVAL
SKGVTQEEAGNLVSDVLASTLAPSEKKAEED
>LBJ_2062 Hypothetical protein
MKSFRSHLKTKIKNEKFKEKFQEEKELINLSLELHDLREKKGLSQSELAK
MAHVTQQQLSKIENGVNCNLATFLKVCHALDLEVKVKSRKNIVRALLSES
YDSKVLGQVLRELSNKVQNPFR
>LBJ_0848 Transcriptional regulator (ArsR family)
MLYYSNMYKLDKQDLIFKALADSKRREILDLLRKKPKTTGEICSYFEPLD
RCTVIQHLKILENAGLLIVKRKGRVRWNYLDNVPIQEIYDRWISKYAKPT
LERLAVFKKQMDRDNRTK
>LBJ_0233 DNA/RNA helicase Superfamily II
MEGALQLSLDFESKSRSGYRGDFCYLTDSPESGIGKIVSSINGKVTIEFA
AVSSKKTVAEDSPYLKILSDYPSPLRNVGEQGELMDLALTAYELKLTHAF
DKLSALSNSRTRLLPHQIESTYIVVNSLRPRFILADEVGLGKTIEAALVM
KELIFRRGYKKVLIVTPSPLLVQWQQELKNKFNEDFEIVKRRNFSTDGDK
NWKNFQHIITSVDFIKNPKYAEEILKTKWDIVIFDEAHRLRRDYHKITRS
YLFAEKISKKCECLLLLTATPFRGKLEELYYLMHLIDPNILGPYHTFVND
YILGNKTDLKDKISKVLLRRRKIEVGGFTKRFAKTVKIELSIVEREFYEE
TTNYVRREYNLAMRTQNRAIGFVMIVFQKLLDSSVFALISALTKRKFLLE
NRLHHIQQMECKLEEWDLDETEDVEEFVSGLDESVQLDLQSLKRELLSLN
RLILLGKKIKEDKKSIKLKETILKLRKEGHSKFIIFTQFRTTQDFLASVL
SDFQVTLFHGSLGADAKENAIVEFKTKTEILICTEAGGEGRNLQFANVLF
NYDLPWSPLKIEQRIGRIHRFGQKDNVFIFNFASKDTVAERILEVLTNKI
RLFEESIGSSDELLGAIEDELDFNSSFMKFVTGNKSRTEMEEEIDNRIKI
AKKGFEKLGALVTPKLIDFNLLDYYNHTLEERSFNNTHLEEFISRFTKIF
PEEAGFKLIRKKSQIYEIDSSQYKGKYGTFDSELALQNDSLEFLAFGHLL
IDRTVSYLIQNQKGWGVSFHSVSNKEYYVFLVEFQFILNRTELFYFETNP
ETGSVRQIEGLPAELRKSHSLSKSSASESSHVELPTNLEESLIRTFLVLD
EIVEFRKKELGDQTLDLFQKEEFKIRTSNQNTLRQLEEKLMRQEAAFKWE
GKPEKKSAMNRTRNEIQKVKEDFDFELRKVRNGKTIQHRFQLFQVYLPNR
V
>LBJ_1766 Transcriptional regulator, AcrR-family
MAKDTRDLILKTSLKLFSEQGYHGTTMRQVASKAGMSLGLAYRYFDSKEA
ILEGIIESHDKILKRYITDEVVSNPSREDLIVNVSESIISLVKENEDYLR
LYWNLMLQPKIHRLKRRNIRLVNMIFFETSKKTIRSIKPNYTEFEIKNLA
STTIGYMINYLTNKKEFSLDDFRNYLVHTLKNT
>LBJ_1908 RNA polymerase sigma subunit
MSAKKEIWEECSILIRKTGDRSSYEKFLQLVTGILRSYLIPRISNPEDRE
DLVQEILIGLHKARDSYREDRHPAPWIFAIARYKTIDYLRKKKVGDRTFS
MDHLEIFASPEPVQEELENVREILKKWLNVLDERQKQILTHLKLEGMSVR
EVSERTGLSEFNVKVITHRAIQKIRKHFSLDL
>LBJ_4013 two component regulatory system response regulator
MRAKLLLVEDDRSLGETLQERLQKEGYEVFWTVSAIFAKKLVKDEKPHLI
LLDVRLPDGDGFTLAEELKKTKDCPPFLFLTAQAGAPERLRGFELGAEEF
IPKPFHLKELLLRVKHVLESHKHSIEETRFFYKDYVLDFRGFQVRKGSEE
FPLSKRDCALLHFLVTERNRTISRAEILDKLWGEESFPTNRTIDNSIVRL
RHAFGKEGERVIRSVRGVGYQWTGEIKDAK
>LBJ_0697 Serine phosphatase, regulator of sigma subunit
MSSQDYSLYTVLAVDDSEINLKLIVHTLKPLGFQIFTAESAADARSVLLT
NRVDVLLLDVSMPDQDGFSFCRELREIERFKLLPILFITGINREVGFDEA
ISHGGDDFIQKPFQPKELIAKIRAFIRIKILQDEVLEQKRNYERELIMAR
KVQQELLPEKELEWNGVSVSTIFQPLMQIGGDYTDAWIENDSLHIFIADC
SGHGPSAALLAAMLKMQVSSLSPNQSLQEKVQTLRHNLEKILPDEFSITF
FYGILRKDLNFEYSNGGHPPPILYQNGEVTILSGMGPLIIPIEINVKEEF
KSVRFEKGSYLLLYTDGATEITDKSMNILGEEKLKKIFQESVSKGGDILV
SMMEAILAHSDRGTNDDDIAMMVLKL
>LBJ_0887 Sigma factor regulatory protein
MTWIKQFSKLKSGFLNPFTFFEREFNYGEAQSWKDQTKIDQSFIRLAFLL
HFMMYSTFAISEVRNSERGILYLGVIFLVNVMSLALSFQEKFLSWVIHIS
NTVIIFFMMNLFHESFYGFQDLENLQIYNNYFLLISLIVIFQMFRLKKSS
CLLTGMISICLHIIFVSIKRMELGLEDFPIILFVPDVVYGLCIVIGTSSV
IIVKRLISISSELDLEYKYIQQDLTVAKQVQENLFPGRLSIKGIRYEVMR
ITPNHIGGDFFDFVQLREGNTGIFLTDVAGHGIASALVASMVKIMVSTMP
YILKVHPSRLMDYIDDSLNEQFHSYHASAIYMFLDFISREVTFSNAGHPY
LIRGSFQKEFHEVETEGAILGFGIKKPIAEQVKLPLVAQDRFFLYTDGLI
ENKNREGKLLGTEGLLEILNGNRFEKDLGVFKANVQKAVENFFGNVALED
DTLFLIVEVE
>LBJ_4095 Serine phosphatase RsbU, regulator of sigma subunit
MSERQLSLSLISNITAKINSTDNLEELLNIIIETTKDVLNTEGCSLLLYD
RNEDCLVFNIAKGTKEKSLTELKVPRGKGIAGMVLETLEPVIVNDAKNDP
RIYRNIDETVGFVTYNLICVPMSTQGEIQGVLEAVNSLERKEFTNKDIKI
LQYLSDLAAIAIRNRRLIRDLKSRANELDCLFQLSQAISNISEMDQFFNL
TVNSVSEIMGAERVSLIFFNPKNGKYELKKSIGFSLKEEEHFINEKEGVI
RKVIETGKPILVQNTSSIMEDCVRPERYKTKSFISVPIRQDGKIIGILNS
ADKKSGNNFDNADQNVLSTISNQIAEAYNSLLSKEQKEKLNSIHRDMQIA
SQIQVNSLPNIPKKIQGLELETSYIASKEIGGDFYDLIYHNPDEVSVLIA
DVSGKGIAAALFMEFSKTIIAGEVSRNSSTSISLMSANRIIQEKSGYFMF
VTVMLARINMAKRKICYSSAGHNEQLLYKAKEKNVVSLSGKGMPLGIKES
EIDEHELDYYPGDLLILYTDGVSEAMNESNEMYGLENLTKLIERNGDMPL
GALKELIIDTTDAFRGDADPHDDYTLFMIRLP
>LBJ_1299 Transcriptional regulator, ArsR family
MSKEKSALKKNQLESAIRGIKGIAHPDRLQILFFLSQKEHSVGELVDLLG
ISQSAASQHLSKMKINGILSSRKESNQVFYYLKDGKYKDLIRTIIKIYG
>LBJ_0400 ATP-dependent DNA helicase, recG-related
MKNSVSKTENTNVKNELLLPVTVIKGVGSSKAAALASIGIHTLQDLLNFF
PRRYLDRSLTDNVLLKTGETVTLIVEVVDAYLAHGKKSRFVVGAKTKNNE
RISIVFFRGVVFFQKIFQPGTTLVVTGRLEYFRGFQLIHPDYEILANAIK
PSYTINSTNLDKKSRQQEPELAELPEMIHAGRIIPLYSSGEVLKSQGLDS
RGFRKILYLALERLKGGISEILPNEIVKRRNLIPREESYREIHFPTDEVS
LDAAKYRLKYEELFYFNLLIEHKKREREKIKRVLWPLPKSETADSVRKNL
LFQLTEDQSSALRKIEELTKRDQPIAVLLQGDVGSGKTLVSLLTALRYMD
NQIQVCMVAPTEILARQHYQTILSFLGNMPFLGIELLVGKEPKKNRYEKL
YRIKKGDTLFVIGTHSVFQEDVLFSELGLVIIDEQHKFGVDQRETLRSKG
KNPDILAMTATPIPRTLCLTLYGDLDLLTIKSKPKGRMPIQTKWFQENRR
EGVYKSIRKYVSSGRQCYIVYPLVEESEKVDLKSCIAAYEHLKHEIFSDF
AVGLVHGKMETEEKDRVMQEFSKNRIQILVSTTVIEVGIDVPNATVMMIE
HADRFGISQLHQLRGRVGRGDEESFCILMTDSKVTEDAKVRLDAMVNFSD
GFALSEIDLQLRGPGELMGVRQSGLPDFRIADLRKDSKLIELTREDAILF
GNPGDLEKEEIRGRFSEGRLLFSN
>LBJ_2951 Transcriptional regulator, AraC family
MYKNSNFKTFILIFGISFSSIFAHTEPVVLLDQDTSSKNISSLIEYRYRD
QKFAGCSPNHIDGLEDLEWHSISADVLRVKRTSFGNWLRFSVQNSEPTIQ
NRILLLGWLNVPDTQLCFFDKNGKFVSVKSGYSNPTTDEKILTTLPHFKI
DLQPNENRIFYLFVLSNEDINYRIRIMGLEEFELHKRLKFITSYSIVGII
GFAVLYSFFGYYRFKNSTFIFFPLYVFSVILTFYFLHGRTFAEVFGNTNN
LFRHSYFLFLGTSYVFLFLYLFAIDKANQKKVYRSVFFWIAGAFGILYSL
IPLLQSWYDHRILLLVATVGLSFFYFIRVHYQFFSSNSSIGLLYTTSWAI
FLVLDTYKTIFHFDFYPFNYFSVFGVVLFFPFHSILVSFSLNEFFNRRKN
QEIVGKEFAQARKSITSSLNVNEVVQNIKDLLEKKKVFLQKSLKEENIAK
ELGLNLHQLSEIVNVEFGNNFPSLINQYRIEEAKKLLLDHPEKTTSEIGS
RAGFSSKSTFYMEFKKFTGTNPNAYRRKKLKSAAAFNKNI
>LBJ_2042 Transcriptional regulator
MNPTMEEIETDKESSSSEHITEVVKENLKLIRHTKGFSLDKLASRCGVSR
AMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKEKGAEGVIVMKAENTK
VLFSSSKVFSSRALFPFNGNRKTEFYELILKPGGIEVAEPHSSGTTENIV
VVSGKLRLRVGEKVVELEPKDSVFFRADIPHEYSNPTDQETLMYLVMDYR
DEIN
>LBJ_2583 Transcriptional regulator
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASITGINNRKDLKEQLGELFF
LGATPHIADLIQVDYDSETDTFGLILPFRFDSSLRLSIREWLTLRKILEE
ITETSSDPQTNSTARKILQKIVSIVPVAGQEALSSYKADIQEAIRNEKSI
DLEYQSRTGEKPTRRKVDPWFLFHSLEDYLLGYCHERNAPRNFRLDNILF
LKVGSDPISQPAGRKKSEYIREFEEFRKNRENSSGIAEIWHTKEVFYNLN
RKLGLERTDETKKSNHVVYHLSKAKIREENWFLETLLPFGKNVVLKSPTH
LVKRILGEIELILR
>LBJ_2322 Transcriptional regulator, AcrR-family
MEQDEVKHRIMDKALELFLKYGYAKTKMEEIARILKISRKTLYKHFENKN
HLLFEILSHKHNLMNTKLGQISEDDSLPVHEKIQAINEFKISQFPAGANE
LIMEIRDQAPDHYAYIKKVKMESVSKTVQALVEQGIERGEIRKDLDPTIF
AALLNSAIEITATPELLLNSSYSMMQLQGEIHEILFYGIMNSPEAVERS
>LBJ_0035 Transcription antiterminator
MIENSKVNEWYALYTNPRAEKKLKRLLQERKIECFLPLISKKKKWSDRWK
VVEEPMYPSYIFVKISFFQDRVKILQLPGAHHFVFYSGKPYVIPDEDLNL
IRIFLETYPDRIQVEIQERLLPGKKILIQEGPFAGFKAEIIQRKNEKQII
VKFPGMNLMTSVTLDIKTLKLEETLGSNF
>LBJ_4001 ParB-like protein
MSSKSKRLGSLADVFQAEKLEGTIRKIRLDKILPSENQPRQDRKKGIEDL
ARSLDKDGLLQPIIVTKQNPEDENYKIVAGERRYHAAKQLGWAEIECKIL
DRDEKETFRLAIIENLQRENLSPYEEVEAMSHLKNSFKYTDQELGTLFGK
SRSYMTELLGISNLSKEELRSCKEAGIESKNLLIQAVAASRKGTFSEFLN
LFQTGALKTVKDAKSFNREEENLSTPKITSATNPKVSNLNSTEYKITKKQ
GLIQISSDNEELLGNIFKLIKKEIRKKFNSI
>LBJ_2727 Transcriptional regulator, ArsR family
MADDTRREIVKLVAKNGELTSTEISQNFKMSPPAISQHLKVLKEAKVLHM
KKEAQKRIYSLNNSGMNEMENWLLDIKNLWNKRLDNLDKYVLKIKKEKFR
DKK
>LBJ_1691 RNA binding protein
MKISVGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTGRSLSYGSVEMD
DSAGTQAIAALNKKEIQGKQIAVIDSEELKREFEKKQSVKGGGASGKIHG
NQSKFGGFSGAGVRRTGGRGK
>LBJ_1965 Sensor protein of a two-component response regulator
MRTILLTEDEPGIRDTIRVVLESEGFKMISAMTGKECLSLLKESPDLLVL
DVGLPDGNGFEILKELRKKNSIPVILLTARESELDRVLGLELGADDYMVK
PFSPRELVARIKAVLRRYDGSSEKKRTEFLTDEDRKIIYYYGKSLTLTPY
EYKTLLLFLKRPGKIFTREEIMDSVWTEPEESFDRAVDTVIKNIRSRLKE
IRPDTDPIETRRAQGYGLKEIV
>LBJ_0690 Transcriptional regulator, ArsR family
MVQQEEKTDQLSLTFAALADPTRRKILAFLRHGETTVKQLAKPFSMSLPA
ITKHLKVLEKAGLISRGREAQWRPARLEPGALKGVADWIDEYRQIWEAGL
DRLDKYLQEFQKMQTNQGRKTDYESGKN
>LBJ_1646 ParB-like protein
MKIRVSDIKVKNRIRKDLGDLGSLKESIQKLGLLHPILIDLNNTLISGER
RLQSVKTLGWEYVEVRIVDIRNKKERVQIEAEENNIRLEFTSEEQERVRE
LLKRYSYTTIFGRILSWILDLFDWLKRFFQKK
>LBJ_0766 Receiver component of a two-component response regulator
MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPDSQK
AIEDIPENIPDIVILDIGLPGKNGLECLKELKEKTPNTKYVIFTVFEDEE
KIVEAIQGGVSGYLLKDTPPELFLAELKVIILGGASLTPRIADKIIREFT
KKEENQNPPIQNTLGLTKRQLQILNFVALGMTVADIADELDISSHTVSRH
IEKIYKKMEVHSKSEAIIRGRRMGIIRDVPGYP
>LBJ_4021 ParB-like protein
MAKRSDFAGMDLLTAFGEKESSSSEIQVSDIVPNPSQPRVFGKEEVSDLV
ESMKRLGLIEPIVVRKQGKKYQIVAGERRYQAAKVLKWNTITAIETSASE
DRCFEMALAENEKRKSLNPWEVGRAIQFLRKEKRKTAEEVSKVLGFTERY
VKQLSSIARLDQKSVQDLIRSGKDPSVKNLEALLKQKEGRGGEMISSRKS
VPTKMTIQLVGLTLQQREKFLKELSSLKKKYGIKN
>LBJ_0157 Conserved hypothetical protein
MYKKFSDRLKRLIETLGFSQAEFARSIDLKPAFISDLINERAKSFSQESL
LRLRIVHNVNPLWLIAGEGEMLITEIEMKTDFDTDRYRTILRKIRTRPQI
EILLESLLEVPDSELEALGLIIEKFRKKK
>LBJ_0931 Transcriptional regulator
MIEALLFVSGEPLKLASIAKSAGIEKIDAREILDELVLDYSEKNGGFLLK
EIAGAYQFVTNESFAELLGNVFREKRREQLSKSSLDTLAIIAYKQPITLP
EIDEIRGVSSRAMVTSLISKKLIKPIGNKEVPGRPALYGTTKEFLIHFGL
NKLSDLPAPVEVKELKFENLDDLLEHE
>LBJ_2173 Transcriptional regulator/sugar kinase
MKSYLGIDIGAGSIKASLVAEDGTILGSTSRTTGAETDETQFLDSLAGIV
SEMKNSSLAAVGIGSPGPIDCENGILIQSANLPLLKNVALVDHLKKKFSI
PVYYNNDANLAALGEYRFGLGKGSPSLVILTLGTGLGGGWVYQGKLFDGY
KGSGMEAGHVTYIPNGPLCGCGQRGCTEAYFSASGFLNRYQEKTGNSLNS
AEEFFDRNRKGETVASILLNEGIEALAQLCRGLIHTINPEKIVFTGGLVY
SWDLFGNSLKERIQELIFPIFRTYTQILPGGNISGTLGAAALCMENQK
>LBJ_1025 Transcriptional regulator, AcrR-family
MAAVEIFAQKGFSAATTGEIAKKAGVAEGLIFKYFKSKKELLLSLVLPIL
KDFIAPISLKRLQAIFTREFSTLEEFLTAIFEERVTFIVKNRHLIRVIFQ
EASTTFEIQAVLKRVFKEKLAPKLKECLKNFQEKGMIIDMPIDSLFRLIA
TNIAGYVLFTEILYRPEAEGEGYSDQEVELKRTIEFIARGLRPNTKAKPA
LKPRAKKKPSVPTTTKVKKKRNLSIGADSYQEFV
>LBJ_0436 Transcriptional regulator
MEETYNGKILISNSSIVMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIG
DVIQGIPDHVSHTLPIYSGGPVDPTFISVLHEDKKISQPGIEVIPGLYLA
RSYDTLLELLKSTSKFHVYQGYSGWSAGQLETEMNRKSWVVHEATKDFVL
NQDPETTWQEALKSKGGIYKYFVEHTKDPMLN
>LBJ_0705 greA, greA transcription elongation factor-related protein
MSNEISATTESRPASDLDKLTSLFNEEIYVRTDASSIPASKFKIFDDLIE
FYKSAGKIDEAKRKIEEYLSEHEDSISARYLLGILSLERGEISDSGLLKN
LLESFKVAGKWAIIEHITDQILKYGDQRLALKYKAEALEKLKKNKELKVV
LEKLAKHDRKNPEILKKYALSILEENKERAITYLKQAIETFAKTKDYVQL
EEIWSIIVSNNHEDLQFFERIERIMLGHRERTRLVGYLYPIVEPYKQLED
WDKVIYLLKKILEHEASSNKARNELIRAYKAKYANHSLLEDFLKMSEIGN
NRKPIKVCIANFERNIVFDTNNYVLHRNWGVGKITSISPNGDSIFVDFKD
KKDHKLSIQMAITSLKPLKKDHIWVKYYENKEEIVDLFQNNIPDFFKELL
TSFNNRMLTADIKSEVAGKFLPALEWSKWWNKAKNIIKKEPNIGFDPKKK
DELVYREKAISLSEELSEKFTHQTDANKKLDIAMEALDNREDAEGAIEAF
NHFYYEEEEAADPVRKIVAFLYLQAASEELGDEEIPRHLSEQKIAELIKS
LPVNNLTEISTKIGNVEIKKSYVNLIRKHAHNPEEVLVGILFEVPIKVNK
YVFSILEEEGKFDLLNSFIKSAGTRAKEAPEVFIWVAKSILTKTWEGEWL
VSSRSEERLELILKVFRLFKPLAKIEDKGTKLKNACKEILHGNDDEVLRE
AIHSGDSEYIRKLYALYKEVPYFTDLEKERLYSLIVELKPDVAWDEDEDE
DEEGDDDILNRIPEGAILVTRRALNRKKEEFEHLLNVEMPENSKDIGEAQ
ERGDLRENAEYKAAMERQVQLQAAIKRLEAEIKSAIILDLTNVKTDKINI
GVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQSPLAKSLLGKKVGDA
AVLNLTGAETRYTVLEIGRFSLQTQED
>LBJ_0431 hrcA, Heat-inducible transcriptional repressor, HrcA
MDLTERHKRILKALVDEFIQENRPVGSKTLFDKHDIGLSPASIRTVLKDL
EDYGYLASKHTSGGRIPTERGYRFYVDSLVILYELTLKEKQRIQQEYLKM
QFKLDQILKATASVLSSLSNAAGIVIGPAKNLDTLKHLELIHVRGDEILM
ILVMRSGTVLHRNIFVDRNYSQEALYQVSKYLNDNLKGYDIYEIQNVVVP
NLMVRRDGPEDFTRIAELLSSAMNPDNSEVTLYIDGFKNLYANFRDEEQQ
LSQVLSLLDDQGFLKEFFSEYIDQDGVYTIIGKDGNRSMSGVSIITSNYK
MGEKKIGALGIIGPQRMDYNRALPLVDFTSKLVSEMVTRISK
>LBJ_1985 lexA, Repressor lexA
MKDLTDKQQAVLAFITTIIKERGFPPTIREIGDEFGITAKGAYDHLKAIE
KKGYLKTAKNQSRAIELIRQSPMESIPVQATSIPVIGRVAAGLPIFADEN
IESYIPVPDEMAKGNVPMYALRVQGDSMIEVGIDSGDIAIIEKRDIARNG
EIVVALIEDEATLKVYYKEQDQIRLEARNPKYKPIKTKKATVIGKLVGLY
RIY
>LBJ_0498 marR, Transcriptional regulator (MarR family)
MSPRLIIYMISRIRDEFHKHLNLELKEKGLSPLTTTHADILFALVKKKKA
QMQEIAKMINRDKSTLTALVDKLEVLGFVSRTKDSEDQRIVHLELTPKAS
SIRPVLLGISRSLVNNLYRGFTEDEKKELVRLLMKLYQNQNRESATAIEL
LQ
>LBJ_1666 mfd, Transcription-repair coupling factor
MKDLLRIIGEGLFARFEFSFPAKKNPARKVKAAAAPERETDLFSVDQYPS
VNLSITGNVYSVTEGSHSILASSLFQKLNRTIVVVSENNTAAEFLFREAL
SFISASDLVYLPGQEVLPYEYLRYPSEMKRERIKAIGKILNGGPSLIFTS
VAGFLKTLPPVQTMQGRAITLEKGKEIDLESLLIQLIDLGYKRTDVCETF
GEFSLKGGILDIYSSYSQEPVRIDLFGEEIESIRTFDPDTQRSMVDLNRA
VLLPVDEYILSDEQKKEYQNILKYYSSSLHIPEIPEAGYGIYYEELVPLV
RENHGILSYFSEPPILLFPSPNSVNQRILHLEREYLSLFEKRSQEVLCAP
PDKLLSFGEEFRVLSELVGLSFVGLPPRNGSDLVSCLKEAPAFKGKIREV
REKISELRAEGGWKIVLTSSFEAQTKRLQGLFEKEGIVLLNEGATEPIPF
HLGKHKSDAFLVLSELRNGFIFENQKILILSENDIFGREYKRKTRFKKQN
SKALQSFIDLKEGDPVVHIHHGVGRFLKIERTNAGGKERDFLKLEYAGGD
SLFVPLDQISLIQRYIGGTESPRLDSLGKNTWKKTKDRVQKAVETLAEDL
VQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEAIEAVKKDLES
SVPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPTTILALQHYNT
FKNRFRNYPLRVELVSRFKTSAEIREILSDFSLGKIDMIIGTHAILSSKL
KPKNLGLLIIDEEQRFGVNHKEAIKRFKNLVDVLTLTATPIPRTLHMALT
GIRELSIIATPPKNRQSVETYVLEEDEDLIAEAIRNEIQRDGQVFYLYNR
VETIEQETKYLGEIVPEVSIGILHGQMTEDEIEETLLDFYNRKYDILVTT
TIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDRKAFAYLLLPK
DRVVTEQAEKRLNTIYEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIM
EVGFDLYVRMLEEAIARIKGEEVVVEVRTSVTLNTNFFIPETYISDTRQK
IEFYKKFEGARDLQEIDEVYREMVERFGDPPEDARTFILLEKIRTLASNL
GFESVTETKDEIKLKSGSYFKGDHSKIIQLISAGTGLTLNPREPNVLIFQ
IGKTSEKEKLDTLIFLLSEMLPSKKL
>LBJ_0945 nusA, Transcription elongation factor
MAVKKTQSEGNLLEVIQQFCADKSLDREAVMGVIRDSLITAYKKKSGLEG
LEEFEESEKPSPVTVEFASGKDSVVIAIAKKVVEGTPSSALEIGLEDAKA
IDASAEIGSVISFREKPVELSRIISSQAKQMVFQRLKDMEKELLYNEYKA
KEGELTHGYFQRWKKDAMSIDLGKVEGIMPRREQNPGEKYHSGDRLKAII
QRVELRPREPIPVITLSRASADFVRKLFEMEIPEIYDGLVEIINVARQPS
IRTKVVVRATRGEIDPVGACVGMKGVRIQSIVRELGNERIDIVEASDDAS
EFIANAISPAKPVEVKVDGSGREAMVVVPDDQLSLAIGINGSNVKLASQL
AGYKIDIKTVAQYNAELASPEARERLERLFYSPAEEAKVAAPQEEEELTP
LEDLPGLSARIVGILKSEGIKDLETLIEYSQDDLAKLQGIGHTTAGQILK
LLRESVEWVEDN
>LBJ_2505 nusB, Transcription antitermination protein
MSARRTSREIAVMALYQLELTGPPLKEVLKFKWYDKKTEPEERDFAVSIV
NGVVKNQEQIDTLIKKYSKNWDFSRISIVNKAILRLSVFALLYSWEVPKN
VTIDEAVELTKEFESEESARFVNGILDAILKNETKSDG
>LBJ_2370 nusG, Transcription antiterminator
MGTKKWYALQTYSGHENKVQKNIEKLVQQKKLEEKIFQVKIPTMDVAEMK
NGKKKVTKRKLMPGYVLIEMEMDDDTRFLIQSLPSVSTFVGSKDGGPEPL
SLEEVKNLFSESGDVASEEPVAPKILFKVGDSLKIIDGPFANFTGLVDEI
FPDKGRLRVKVEIFGRSTPVELDYLQVKTEN
>LBJ_0728 rho, Transcription termination factor Rho
MATVRRDNKNKHHNQNNNYSQNETTGSIEEESAGQESQDLESSDNADHRS
RKRKRGGYEGPTPAPIDLVELKKKAIADLIEAAKGLGVENTSGLKKQNLI
FAILQAQAERDGQVHAAGVMEKLPDGYGFLRSPDYNYVPGPDDIYVSPSQ
IKLFGLRTGDTVEGQIRPPKESERFFAMLRVETVNGYTPDVAGKRALFDN
LTPLYPNERLKMEYDPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTILM
QNIANAITSNHPECTLIVLLIDERPEEVTDMARHVRGEVVSSTFDEPAQR
HVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNQVIPTSGKILSGG
VDSNALHKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKGT
GNMEIHLDRKLSDKRIFPAIDINKSGTRKEELLITKDVLQKVFVLRKVLS
PMSITESMELLLEKMRLSKTNDAFLASMNTQ
>LBJ_2111 rnc, Ribonuclease III
MVFKKTQPSPSLKNPERIQSFKKLSKKIGIKFSKIEYYNTAFIHSSYKNE
NPEILEDNERLEFLGDSVLGLVAARSLFQKYPKASEGELSRIKSKIVSTP
ILNSIAEKLNLGEYLLLGKGEKNSQGKGRRKIAANLFESLVGAIYLDRGF
EVAEKFIVQHLLEFAENPDMEESVRDYKTQLQEYSQKHFKTLPVYRMKGE
SGPDHSKTFQVSVRIRDQWEASGYGASKKIAEQNAAKELYIRIRRGF
>LBJ_2632 rpoA, DNA-directed RNA polymerase, alpha subunit
MSLKSLLKGFKRPKKIEFNTEASTPNYGKFVAEPFERGFATTIGNSLRRT
LMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEE
KDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDL
EIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSD
YEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEELEEEDDELDE
ADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKH
YSDQCLQELKGKLSTLGLSFGMRDF
>LBJ_2365 rpoB, DNA-directed RNA polymerase, beta subunit
MYGQVERKRVNFGKITNLDYLPNLIQIQKRSFDWFLQADVKDETKRKHQG
LEAVFRETFPIESPNNDMIMEYSHYILGEPKRSPQECKDTDATFAMPLKA
VIRLIIKETGEIREQTVYMGDLPVMTEQGTFIINGAERVVVSQLHRSPGI
FFSYDMERDVFSARVIPYRGSWLEFEMDNKGILIAKIDRKKKFPATLLIK
SLGHGTNEEVLRLFYSSKKEKIAGATSKDLKKILGRRTINDIINMETGEV
MLEAGSKVNEDNISILKEMKVKEVELIEFPKGKDNPILINALEKDGVNDY
EDAILKFHSLMRQGEPSTIENATTELTRLFFSPKTFDLGEVGRYKINSKF
EFNNPKEFSGEKARVLRPADIIETVRYILNLFSETENYYPDDIDHLGNRR
IRSVGELISNQLKTGFSRVERVIKERMTVQEIETQTPQLLISIKPITAVI
NEFFGSSQLSQFMDQTNPLAELTHKRRLNALGPGGLSRDRAGMEVRDVHY
SHYGRMCPIETPEGPNIGLILSMSSYARVNDYGFLETPYRTVKNGKVTGQ
IEHLTADKEEYHYIAQASGVIDEKGELKNKLISTRHRGDFPFRNPSEIQY
MDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLREEAPFVGT
GMETRAAYDSRICIVNKHDGVVTSVDAETIVVERKGGKESDTYSLTKFKK
TNQGTCFNQKPIVGVVHSEINGKVSKVSKEKIEVTGENGELKEYVLQIGS
KQYAPIVSSGEEVKRGTTLAGQVVVGEKLDEMGNILVKGTVLADGPAVDN
GVLALGRNVLAAFMPWEGYNFEDAILISERIVRDDVFSSIHIEEFEIQAR
ETKLGPEQITRDIPNLSDKAFRDLDETGVIRIGAEVKPGDILVGMVTPKG
ETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGFEGTVIDIKRFSRENQDE
LPAGVEEMVKVFVARKRKLLVGDKMAGRHGNKGVVARVMAEEDMPYMEDG
TPLDIVLNPLGVPSRMNLGQIFETQLGFAASKLGISFETPVFDGAEESDV
DNFCKEANLPLNSKFKLYDGRTGLPFMNEVFCGYIYILKLAHLVEDKIHA
RSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASHTLQELLTIKS
DDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIITDSEGN
TVDISDYEDEYSKSKKKIKFETIENA
>LBJ_2364 rpoC, DNA-directed RNA polymerase, beta subunit
MRSHNDFESITIRLASPERIKEWSYGEVKKPETINYRTLKPEKDGLFCEK
IFGTTKDWECYCGKFKSIRYKGVICDKCGVEVTHSKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLDMTVNQLKSVLYFEKYVIIDPADSGRSRGELI
DEEEYHGYLDEYGDKFVAGIGADAIKELLARIDVDAEARMIRQKIQDKDK
ISDKRILKRLEVLEAFRDSGNRPEWMVLDIVPVIPPELRPMVQLEGGRFA
TSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVDALFDNSR
RKRAVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KYHEMGLPKKMALELFKPFIMKRLVDLDLAPNIKSAKKKVEAEDKEVFDV
LEYVVKEHPVMLNRAPTLHRLGIQAFLPVLVEGKAIKLHPLVCHAFNADF
DGDQMAIHVPLTPKAQLETWMLMLSPHNILNPANGHPICGPTQDIVLGIY
YLTSELPSEPGAPLKSFSNLDEVHYAIDRGVVEFRTKISVYHQGKILETT
PGRLIFNTILPEGYAYVNRPLSDKETNRIIADVYDKYGPAKTVLMLDDIK
KLGYRYATLFAPTISIEDIRVSPGKVGLVGDANKEVEKADSEYRKGIITN
EERRKKVIEIWTKTNDLITESMFKELEKDKGGFNPVFIMAASGARGSKQQ
IRQLAGMRGLMAKPSGEIIELAIRSNFREGLSVLEFFISTHGARKGLADT
ALKTADAGYLTRRLVDISQDVIISEDDCGTEESISLGIVKEGENVIVSLN
DRVFGRYTAEDVIDPVTDKVVYPRNTLITREVGQKVENLGYDKIRVRSPL
TCESKQGVCIRCYGMDMARLIPAEIGEAVGTIAAQSIGQPGTQLTMRTFH
IGGAASAKVQEKEHKVSYTGIVNNINGRLITNEKSQSVFSRRGSIVIQRL
IQQYKTEELSNLRVENGQKVDKGELVATSPSGENITSAMPGAVHIENGIF
RILGEEAVIPVKTGTVVNVKVNDITQPNQPLAEFDPYNEVGISEIDGTVQ
WMDLEIGKNVRRDEDLRTSNILLKVIEQRREKLNPRIAVISGGSREEYSV
PVDAIISVQDGDKVKAGDILFKIPTVAEKTRDITGGLPRVDELFEARRPK
DATTLAETDGKIEISGEIVKEKRVLYIHPDNPDQEKVKVTIPIGKQIRVR
NGDFVKRGDQIDDGNLDPHDILRVKGVTALQVYLVQEVQEVYRLQGVHIN
DKHIEVVVRQMLRKVLITDSGDTSFVNQQQIDRLMFNEENKRVIAEGGSP
AESVPILLGLTKASLNTESFFSAASFQETTKVLTDAAIKGKTDNLMGLKE
NVIIGHMIPAGTGTKKYKDISVFKSAYGDLDRPLEEEEEEEIPQSIADDS
DGDE
>LBJ_1376 rpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
MENLQSMPEVQKIISLGKANGEVSYDDINEILPDKILNSEKIDDFFTLLH
EMGIEIVEEYTRNTLEPASTLVPKDDSKPARKKKESSASASGSEDPIKLY
LREIGKVSLISGETEVFLAKRIEKGEKIIEETILSSSILRANYIKLLPKI
RSKKIKVYDLIRVDKMYALNAEEAHKLEELFFKNILVIQEQEKVLQEAVS
KIRKYSETSKKFKEFKEKIDASTEIIHNAIQELGVSQKEIQKISQKIKSM
VFRIKEIDRHFLKIKAQYGQDVRDIKAFNRFIEKNEKLDDIEVKMGVNID
EVREVIKDIRNNERKLRRMEQEAGSTVQEIKDWGEKIIKGEREISQAKKE
LVKANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFS
TYATWWIRQAITRAISDQARTIRVPVHMIEQVNKVIRETRLFIQEFGRDP
NNEEIAERLGWPVQKVKMVKNVAREPISLEIPVGSEEDSELGDFIPDTEV
ETPVNTAASSILAEQIRQVLHTLPAREQKVIRMRFGLDDGYPQTLEEVGY
QFKVTRERIRQIEAKALRRLRHPSRSKKLKDYIDG
>LBJ_0518 rpoE-1, RNA polymerase sigma subunit
MSQNSESQIFDFDGLYSRNYEKIYRFLLSKGASKEEAEETCQETFIKVLN
NWDKFDPSKGNETSWMFTIAKNQFLDLVRKKGTSEKREVENSHKVLEFIS
KKEIEYEEDKHQLDLLNASLENLPHLEKNIIILRFLRNYTIKETAEKLGI
SARTVNRKTYVSLIFLRKKLQNSNFDFESI
>LBJ_0173 rpoE-2, RNA polymerase sigma subunit
MDQKEFTELINSTKHIVLSAIKKNLFDEFYDSIDDVVQETYFRAYKSLSA
NKFRGDSSVSTWLYTIARNESLRMNQKRSRQTALANKLKEKVTLDNSIQE
KEAVSIGFTDFELKDLLAVLPWKYKSVLSLVGEGYKEQQIAEKLSIPEGT
VKSRAFRGKQILKKFFVDK
>LBJ_1446 rpoN, DNA-directed RNA polymerase sigma-54 subunit
MNLSQSLVQKQTQKLVMTQDLRQSIELLPLSTLELSDRINSELVENPMLE
EEYVSERNKTPDLYSRDDLRRKEKNDFLKNSDVTWQDHFSLDKAGSFGSD
ASDRNQKYIESSPERSSLSEHLLWQLRLSSLKPEEISIGEMLISMLDDHG
FITIPISNLCKEMKLNEKKVRKILDQIQRLDPIGIGTKNVQETLLIQAQI
VKPEDQKLHTLIRDHIKDLEKLDYKSISKKMEISLETVESLASEIKKLEP
YPATLYTPNKPDYVIPDVIVREVEGEFDIYINDEWIPRLKINKEYKNILK
NAKESDKEYITSKLGSAEWLIRSVNQRRQTLFKVTSAIIEMQTEFFQKGI
QYIKPLTLKDIAEKLEMHESTISRITSNKYVQTSRGIMELKWFFSSGVRS
SEGGIESSKKIHDLIRNLVKEEQSDRPLSDQEIVEAIGKQGIEIARRTVA
KYRKILKILPSSQRKKVKSLESR
>LBJ_0248 rsbU-1, Serine phosphatase RsbU, regulator of sigma subunit
MQFSKIFFFLVGPFALIILVMISSPWRTGDGLKAYQGKIDLRGIPNPAGM
TKLNGEWEFNWLKESDENHSKGFIEVPGSWTNEFKNYRAYPKFGYATYGL
KVFLPEVWKKRILSISLGAIASAYQVKINGQIIGECGVPGIDADSTISRV
EPKEFLFFADQNEIQIEIFAANYSSTIPGVLLPISIGPSDSAGVSKAITL
FFDIFSFSSLLIMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRSSLINSK
ILMLFFPQIPWPWINKLNHLTLSMGVPFFLLFFSSLFAPYVNRKLVNAGV
VFSILFSVVTLFGNMQFNNQNISIYHYFILITICYLFYAILKIDFDKERN
YAYILYGSGILFIAVLVDLFYVRILKTGSIQTSHYALVLFVFLQSLLLAS
ERSRKFAETRELALNLRTSNLELFEMKEQLVQKIEDRTRVLNDNIVQINR
ELEIAQNVQRKILTPLDRNISGIRFYYEYMPLEKVGGDFLDISEILPGKV
RVLIADAVGHGVQASLMTMALKTEYEELKNLENPAQILKELNSRFLKKFD
SLESIFPCMIGDIDTKKEEFTYASAGHPDQILQAPGEFPSLLQKTGPILG
LFESLEIVSKTVLFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKAL
HEGKKSELNVLIQELIKIEELTRGENPRYDDITLIVVESYTVERS
>LBJ_0643 rsbU-2, Serine phosphatase RsbU, regulator of sigma subunit
MNPYILIPFSTLIINGFLFSYVSALKGKSETVTLYQRYSFLLFLWHVSII
LYWSFLPNNWPTIVFKASSFCWIFIGLLFFEFVVRFTNSSYRFTIYFFRG
FCLVSFLLTISTDLVITGTIRSYWGDMILAGPLYLPISNFVSVIPTLIGC
FILIRNGFRSSNPLLKQQSKLVAYGTILTFLFSFTTTLLPRYWSASLTFP
PLSGSATLIQSVCIFIAIHKYGFMALKLERIALRLYSEIREGLILLSSKG
TLLFSNLSARRMLHLPDSLNLGSNFDLRDYLENFPSDSFFKRKEFVNLSV
KTESSSLNSPEEFLQIIENKYLEVSSSPISLSGKNRDKIYILRDITEKKN
ALEKIRELLYRLDLDLDFARDIQQMITTRDFPASPDYKIHSHFQPYVKVG
GDILNVIKEKDESLHILFGDVSGHGISAAMVAAMISIAFNAATGRSGSTD
KNLLFIHELLKDTTTLHSLSSVYMRYVSSERKLEYSYGGHHAGLLIRNGI
CNPIEGSGEILFATLSPKIQRYELDLIKGDRVLFYSDGLFEVKNREGNIL
GKDHFLKAVGSLIVEDTNSMIRSILSYSDSYGEGEVSDDITIFCLEIL
>LBJ_0644 rsbU-3, Serine phosphatase RsbU, regulator of sigma subunit
MNYYLFFPMAAFVANTMFIAFVYARRTNNPIIRSYLLYTISLDAWLFTYA
FGWSFPPKPWMTWAFKILSITWLPLGTLYLEFVFTFLNRKPGIFLWLFRI
GIPISYLIILSTDWVIQGSIHYYWGNEGEPGPLYFFVIFNFVALPALIGL
GVLTQSFFASGKDQRKQTGLAILGSMFAIFLSFYSEIIQVDDQGRMLSMP
LTSIGIVIQSFLIFTAITRYGFLRINVEGLAADLFRDIHDGMILVRRDRS
LFFMNESAIRILGISNSPPSHFYPSDFLKGYRESPDHFSKEYEPIFNVDC
RGVELTRSHIELTGKESGYLYILRDISEKIESREKIERFYSDFNKDLEIA
KIAQTSAISTIFPESSKYKFYSHFQPFELVGGDFLRALERSDGKLDILFA
DVSGHGISSAMVAGMLSISFQLVIETNPTPKKALEKTQTLLLNAVLNHHV
SAIYLSFDPDTKTLEYSYAGHHPILIFREGEIIPLRGVGRILLITPDTEL
NNYTFQLKKGDILFLYSDCLFEVRSPEGEILGYENFMLKMNEISVYTPVN
ILKTCIGQALAFGNGKLTDDLTILILEIF
>LBJ_1820 rsbU-4, Serine phosphatase RsbU, regulator of sigma subunit
MISSKKQDSLLRQDSDGNLYLEDNPGLTVVFKSLLTELIRLTSAQFGIFG
FRLEDGTLKPICENLPSNMVKEARLVSEFCFRTGQDFNLKKGDSPSKLIP
SLEQNSICCVLHVGELGASSSEDQKKIFGTILIGRSEGGEFREPDLVHLK
TTARTISDLLEESFISGESSLVVLSLMTTSRVALESVQMRKQTDRFDFLL
TEIIRVSGLINKSLDLSQLLEAIMLSSKSVFRTEACSVLLLDDTKEYLYF
HTVLGEKRDEVTRIRVPVGKGVAGMVVRDKKPMIINDATNDPRVYREVDK
ASHFVTRNIMAAPLLVEGQVIGVIEAINTIDRTSFTEEDLELFSSFSGTS
ALAIQKTELLQNLEDANKDLRKKVSELESLFELSQVVSSAKSQADLMKYS
IPVIHNEMDAGKTGIFLINRKMGILTLIVCTSERAVEIFRTTNYHNSFIH
RSIEQETTTVKEDIQDFAFDHELDLEYLKGSYIVLPLTQQGRNAFGVITV
SDRVDKLSYNHSHLRLLQTFASLIARGHETLKLQNEMISRKATQRSLQRE
IEITREIQKNILPELKSFHSNFDIGVKSVPAKDVSGDFYDYYQYQDGQYS
FLVSDVSGKSLPAAIFMAMSSSVIRTLARNHDLDPEEILKQGNALIYEDS
HNGMFVTTFFIHYNPAIFTLDYASAGHNEQVLIRKDNSWEFLKASGPPLG
VIPSANYKGGSLIVEPGDMVILYTDGAIEEKNARDEEFGLERMIREIIAR
KHLPAGQIVEELFGLVRKFSGASELFDDFTVMILKFNDNYQFSRTFEANI
SSIPLFREFVYETIKVRNLEESQRDDILLACDEAGTNIVMHSYENTSLKN
PEFECKIRFTGDWITIVLIDSGKTFQRKEVQKPSIEDNLSGKRKGGFGVY
LIEKLMDLVDYSSESGKNVLILKKNFQNKASNGNNF
>LBJ_0842 spoT, GTP pyrophosphokinase
MGFVKTPATKDMLLEGVRETLGESAYESVQKAYDVSERAHQGQFRLSGEP
YIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDIT
DLVEGVTKISKIKSQSKETEAAENIRKIIVATIKDIRVILIKLADKTHNM
RTLSFQLPEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEE
YQEVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVDGRAKHFYSIY
RKMKLKEKTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDY
IATPKTNMYQSLHTTVIGPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEG
KPSLSEKNVKVRWLELLSSWQDSALDPKEFVEELKYDLHEDEVFVFTPKG
EILQLPKGATILDFAFRIHTDVGLKAKGGRINGRMLPLRTELRSGDQIEI
ITDKRTKPSPIWLRIVRTPSARQKLRSYFRKLKEENKKDLQQEAEFAAEI
TLNVEVLEELKKKPLAKPAKQIDLGAGKVIVAGLRGILARLSGCCSPLPG
DGIIGFVTRGRGVSIHKKGCATAKQQEQEESMRIITVEWDYGQSESIPVL
IEVKSKDRQGIFMEIVKSISNTQTNIRESKASTDQRGNLVANFEVDVEHL
DQLKEILSNLKQIPDVYQAHRIKN
>LBJ_0225 srmB, ATP-dependent RNA helicase (superfamily II)
MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQT
GTGKTAAFAIPAIELLEVESKHLQALILCPTRELVIQVSEQFRKLMKYKG
NFEVVPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGSIRLNDIKI
VVLDEADEMLDMGFREDMEFILKDTPIDRQTIMFSATMTEDILTLMKRFQ
KHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARLIEYRNVKLALVFC
NTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRNGNIEILVAT
DVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGK
QIYNLKKIERINGIKIEAGKIPTLDDLEETKIHSYTSKVRSIVDAGHIGK
YVNQVEKLMGDDYTALDIAAALFKMTILRDSVTFDDSVQFESNFKYEERN
SFKKKPGKYRDRNFGRSGSGARTKSNPGSHSGNSSGNGSHSKFSKGDKNQ
KSGGLSSFKKKKK
>LBJ_2992 vacB, Exoribonuclease R
MNIKKKQTKQNKTAKPDTKKKIFGRSDKNKKNRFARRSEGFPESEIGRKI
LRYLRSRAGSVIQFKDLTAKILKEENQNSYGKKREKWQFEEREREITEIL
QILEAEGLIELEKKNILVNSNQKLLGTISTSKKGDGFVKLPSGMEVFVPG
QYVQSAIQGDLVEVQPNAIGKKGRLEGEVTKILRRGRDLYRMIVIEKDPK
FIFGKLLDIDGEEKEGYLLRKTILMNLQDEIQLGDVLIVKLREETEHERN
LYEVQFLRFESDTKEDLDLMRMLMKYNYSILYPENIVLNLPEEVDESTVD
DWGSRVDLRNLKCITIDGEYSKDFDDAISFVEEKSRIRFYVHVADVSYYV
RLGTDLDEEAYNRATSVYLGSRVVPMLPPDLSENLCSLVAGKNRLAFTVE
MEADWKGKITHVKYYKSVINVAERYTYNRAESEILSGDPGNWIFRMNEFA
KALRARRIEDGRVDLNLKENKVVTDSEHNVVEISVQDRLQAHILIEEFML
SANIKIAESIRKKKHPTLYRIHEPMNEEKLESLNAFLQLNGIKILLKDSS
YEAIRAVLKELEGKPAERLFNMFLLRTFMQAYYSGEYLGHWGLGFEDYCH
FTSPIRRYPDLVCHRVLQQILLGKKPLYGPEEVVTLGLHCSHQERKASDA
ERDYYKLKACRYLEKTGIKEFSATITGCKPHLIFVDLENPSVDACLISSE
FTDEGEIRLETDFSFYSKKYSKIYTLGDKIEVELDRVDYEEIKIFVKMKK
FQKKV


# Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

>LBL_0529 Transcriptional regulator
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASITGINNRKDLKEQLGELFF
LGATPHIADLIQVDYDSETDTFGLILPFRFDSSLRLSIREWLTLRKILEE
ITETSSDPQTNSTARKILQKIVSIVPVAGQEALSSYKADIQEAIRNEKSI
DLEYQSRTGEKPTRRKVDPWFLFHSLEDYLLGYCHERNAPRNFRLDNILF
LKVGSDPISQPAGRKKSEYIREFEEFRKNRENSSGIAEIWHTKEVFYNLN
RKLGLERTDETKKSNHVVYHLSKAKIREENWFLETLLPFGKNVVLKSPTH
LVKRILGEIELILR
>LBL_0280 Transcriptional regulator
MAAKKKNSEIEHKVGDYVVYPIHGVGEILEISKKNILGKKKDCYVLEIQG
SKMKVMIPVDKAEQVRIRPIIDKKEIKKVIALLKKDEVDTEEDWKIRYQN
NLNKIKSGSIYEVGEVCRNLFRRASGKELSIMERKLYESAYNLVKMEVAL
SKGVTQEEAGNLVSDVLASTLAPSEKKAEED
>LBL_0536 Superfamily II DNA and RNA helicase
MKFEELSLHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDIIGLAQTGTG
KTVAFLIPVVHTILTKNIQKVSALVLAPTRELTIQIADEAKKLLKHSDGI
RAVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMVKSGSIDISNVEFFV
LDEADRMLDMGFIQDIRWLLHKCKNRKQTLLFSATLSVEVMRLAYRFLNE
PVEIQINPEKIITERIDQKIVHLGREEKIPYMTNLIVNSKDEGQGIIFTN
YKANIPKIVYTLRKYGIPITGISSELDQKKRLRLLRDFKSGKYRYMVATD
VASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRMGKAIGFCSESD
YVELEKIEKYLKQKIEILEVNEEYIQFPTGKFPPFIGGDSYDREKEVHFK
QNGRRPHDRGDRAPHKHDRDRRGDKRHTSHIHSHSPTRDSHKKKPAAAIQ
EAEFFLQKADSVLSAELKGSKSENKNQHRFQGNKGKQRQQQGGGQQLHKQ
QNRNQNKQHVNQNYDKSKRNLFDINDTVREDTKKKKGSIWQKIKSIFGR
>LBL_1376 RNA polymerase sigma subunit
MSAKKEIWEECSILIRKTGDRSSYEKFLQLVTGILRSYLIPRISNPEDRE
DLVQEILIGLHKARDSYREDRHPAPWIFAIARYKTIDYLRKKKVGDRTFS
MDHLEIFASPEPVQEELENVREILKKWLNVLDERQKQILTHLKLEGMSVR
EVSERTGLSEFNVKVITHRAIQKIRKHFSLDL
>LBL_0107 Transcriptional regulator, marR family
MSTKDLFLENQICFPLYACSRALTSLYRPILDQLGLTYPQYLVLLVLWKG
DGCSVKEIGRKLYLDSGTLTPLLKRLEDSELVVRKRSEKDERSVRIFLSL
KGKKLKERAVGIPSKLLEILEVDKKSLIDLKNSLDRLWLILSEKTE
>LBL_2725 Receiver component of a two-component response regulator
MKPTNTKIFLVDDHAILREGLKMILSGQFEICGESGDAEKALDQIGKLNP
DLVITDISMPGLSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGI
NGYVLKDDAGNDLLRAIEAVHKGETYLSPGITAHFLSGFVGSGKPGEENQ
DAKKAFSVLSDREREILKLVAEGNSNESIGKILGISPATVKVHRANIMKK
LNLHKVADLVMYAIRAGLIES
>LBL_2037 Acetyltransferase
MPKSKTNSGKFQIANLLPEHREAAIELVNQFFRLVNSLTLDGVFRIRPRA
GTKMIDVYLKLRGTGKVLLLGGFLGEELVSLLIARTEDKPYLEEQKILFI
DLAVTKRGKQKTGYMKPLVLACESWAKDQSFQSIELRAIIENENAISFWK
AMGYQPFYIRFRKSV
>LBL_2789 Transcriptional regulator, marR family
MNEFQIENTLGYRINRGAIIMKIELQNRFKNAGFSITPEEWVILNRLWES
NGMNQNEISQKTLKDKTTVTRFLNGMEKDGLIRRVVAEEDRRSRLIFLTD
KGKLLKEKLIPIAKSLLVDSSTEINKEHLTVTMNVLAQIERNISNLKAK
>LBL_2782 RNA polymerase sigma subunit
MKLNQDHDFSLFYRNYKDSIYKIIRFLSSDPEEVEDIAQEVFLNIYKAFP
NFSPEKGSFYAWAATIAKNTYYTYRKKRKKDLLMEGGGAFVESVSVKDDF
IRTIETQIVENELREIIASLPEPEKSIILLKEINNYTLEKTSQALNISSR
TVSRKLLKALDLLRIELERKKVVL
>LBL_2901 Serine phosphatase RsbU, regulator of sigma subunit
MRNILLLFISLILLSIVLLIGVLQTSSETLRPPFYYYPNGTIIQSSKEFP
SILGKKVDLLELEIAVKMAESGKSYENGIHIYGKGVSETIPVILAPKSYY
SVIQEFTRDILISLLYLSVAIWFFFYTRDLYMLLLFGSLSCLSLFNFFLV
GFHEFHFLFFFFLYFTAFVILNISFRLRGKELPIRWFAPEVIFSLIAGFV
GRSQKADPHIFGILATNGVYFILFCSIICIFFLVLDSIRNLFPLQSLFKK
LSLIFAFSAISILPFVSVEFSELISPDLSKLLILSAFLIFPALIIYGTFT
YSIVPVQIAFSSSLTSIYLILILAGSYLLLLGAFFKFNPIAADKYLEEFN
ILFLCSSVYTISSINRRLSNLVDTWSFKRNHKLHSAMETISAMISAPISM
RATINSLMKKVSEALDITKILVLIPADKFPRTDLKNINFIRISSNSEIWQ
YFATNTEVTVTTHLAYGLGIRESVYKFLHNSGVQLTYPIFNYSRGKEVSG
VFLVGEKNNRKNFNLGELHFLKECTRMASMLLQNYTLLAEEVEKKRIVRD
LNMASIIDKTLHVAENEHIKEIKIGFFSIPAVGISGDYLDIRKLNSNTML
LALGDVSGHGLGTGYLVSAIRGIIQNQIRKKSDLSTIFKVINSFLIERYR
GSEFMTFICGEYNSQEETFEYINAGHSSPICIRKNGKIELRAETQRVLGV
LPTEYKRLTIPIHPGDKLILFTDGVTETFNDNEEIFGDENFLNLLKNNHQ
LNPQDLTDLVLKTIQDFRGKKDPSDDISFICLEVNEKTHELKGNQLDK
>LBL_2894 RNA polymerase sigma subunit
MRENTPIVCNQEDWDCIQKVLHGDFNSFEILMNRYQGLIYSQVIKAFRNE
TEAEDFTQDIFLKAFESLSTFQGRSQFSTWLFVIARNEIIRRYRREHPEI
SGLDTLLLTESEVEKKNETSSEQETKLLKQEISEKIRSLVESLPELYRKP
IMLHYFENMSYKEISQKLNLKMNTLKSYIFRGKEIMRDWLNKEENEKQE
>LBL_1769 Transcriptional regulator, HTH domain
MFKSLHSREAKIFCKNLIAARKSADLTQLEIAKRLGEPQSYISKIESGER
RLDVIEFWRIYKILGKSFEFYFQFDEKPEGSEKRSKTLKAASGKRKKKRS
KF
>LBL_2897 Response regulator
MKNQSGNPGQKVLVVDDEEDIAELIRFHLEENGYQVDTCQNGLEVLPKLE
KNTPDLVILDLMLPGIGGMDLCKKIKEKYSMPIIMVTAKSGETEAVLGLE
LGADDYVRKPFSTRELIARVRSVLRRTKEGEEEEQFEGNITIGNIFLNLK
AHKAFINNFEVDLTLIEYKILNLFMTNPGVAFTRDKLLDRVWGKDIYVTD
RAVDVNIKRLRDKLGDEKERLETIRGIGYRFNEA
>LBL_2588 Transcriptional regulator
MLLVVDVGNTNTVFGIFENGKNVPLFHKRTVTRKDRTSDELGLFFRGFLR
EFKIENEAITGGIYSSVVPTLNPILERMFQDWFKIEAIRVHYQMKLPFSI
SYPRPYEIGADRLVNAAACVIDSPGKFIIIDLGTATTFCVVSEKPEYLGG
VIAPGLKVSMDALTRNTSQLPPIVFQSPEKILGDSTIESIQAGFFFGWIG
LLEGIIREIKKDKGQDYRVIGTGGLVTVIDAAHPGIFDKIDPLLTLRGLQ
ILHQMNS
>LBL_4219 RNA polymerase sigma subunit
MTSRKDFMDALYREYSGRIFDFLYKYSSGNPEVAMDLMQDTFLNFFRKYS
DSNVDREQAIRLLYTIARNRSINYSQQFSTVKENGNSEMEDFQEQKLSFV
RKAELKDLEERLLICLDELEENEKYALILRFMEDYSLATIAEIMNISVST
VSRLIVKATAKVTEIAEKKNLKP
>LBL_2234 Transcriptional regulator (ArsR family)
MLYYTNMYKLDKQDLIFKALADSKRREILDLLRKKPKTTGEICSYFEPLD
RCTVIQHLKILENAGLLIVKRKGRVRWNYLDNVPIQEIYDRWISKYAKPT
SYLCGDRD
>LBL_2677 ATP-dependent DNA helicase, recG-related
MKNSVSKTENTNVKNELLLPVTVIKGVGSSKAAALASIGIHTLQDLLNFF
PRRYLDCSLTDNVLLKTGETVTLIVEVVDAYLAHGKKSRFVVGAKTKNNE
RISIVFFRGVGFFQKIFQPGTTLVVTGRLEYFRGFQLIHPDYEILANAIK
PSYTINSTNLDKKSRQQEPELAELPEMIHAGRIIPLYSSGEVLKSQGLDS
RGFRKILYLALERLKGGISEILPNEIVKRRNLIPREESYREIHFPTDEVS
LDAAKYRLKYEELFYFNLLIEHKKREREKIKRVLWPLPKSETADSVRKNL
LFQLTEDQSSALRKIEELTKRDQPIAVLLQGDVGSGKTLVSLLTALRYMD
NQIQVCMVAPTEILARQHYQTILSFLGNMPFLGIELLVGKEPKKNRYEKL
YRIKKGDTLFVIGTHSVFQEDVLFSELGLVIIDEQHKFGVDQRETLRSKG
KNPDILAMTATPIPRTLCLTLYGDLDLLTIKSKPKGRMPIQTKWFQENRR
EGVYKSIRKYVSSGRQCYIVYPLVEESEKVDLKSCIAAYEHLKHEIFSDF
EVGLVHGKMETEEKDRVMQEFSKNRIQILVSTTVIEVGIDVPNATVMMIE
HADRFGISQLHQLRGRVGRGDEESFCILMTDSKVTEDAKVRLDAMVNFSD
GFALSEIDLQLRGPGELMGVRQSGLPDFRIADLRKDSKLIELTREDAILF
GNPGDLEKEEIRGRFSEGRLLFSN
>LBL_2983 ParB-like protein
MAIKPKALGRGLGNLIPVNENKTPINSSAEGALREIRISEIRPNPSQPRK
TFSEESLRELSETIKAHGVIQPIVVKQLDVGYEIISGERRYRACKLAGFV
KIPAIVKNVSENQSMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITD
ISTRVGKNRSTISNLIRLLQLPDSVQDLIKNGRISEGHARPLLSLADKKK
IEQLAYQIAEKGLTARQVEDLVSNLTEERSSVPEKKKSRKDVNIVELENK
FRKKYSMKIEISHNQNSGKGKMAIVYPNLEAMEKILNALGL
>LBL_2847 DNA/RNA helicase Superfamily II
MEGALQLSLDFESKSRSGYRGDFCYLTDSPESGIGKIVSSINGKVTIEFA
AVSSKKTVAEDSPYLKILSDYPSPLRNVGEQGELMDLALTAYELKLTHAF
DKLSALSNSRTRLLPHQIESTYIVVNSLRPRFILADEVGLGKTIEAALVM
KELIFRRGYKKVLIVTPSPLLVQWQQELKNKFNEDFEIVKRRNFSTDGDK
NWKNFQHIITSVDFIKNPKYAEEILKTKWDIVIFDEAHRLRRDYHKITRS
YLFAEKISKKCECLLLLTATPFRGKLEELYYLMHLIDPNILGPYHTFVND
YILGNKTDLKDKISKVLLRRRKIEVGGFTKRFAKTVKIELSIVEREFYEE
TTNYVRREYNLAMRTQNRAIGFVMIVFQKLLDSSVFALISALTKRKFLLE
NRLHHIQQMECKLEEWDLDETEDVEEFVSGLDESVQLDLQSLKRELLSLN
RLILLGKKIKEDKKSIKLKETILKLRKEGHSKFIIFTQFRTTQDFLASVL
SDFQVTLFHGSLGADAKENAIVEFKTKTEILICTEAGGEGRNLQFANVLF
NYDLPWSPLKIEQRIGRIHRFGQKDNVFIFNFASKDTVAERILEVLTNKI
RLFEESIGSSDELLGAIEDELDFNSSFMKFVTGNKSRTEMEEEIDNRIKI
AKKGFEKLGALVTPKLIDFNLLDYYNHTLEERSFNNTHLEEFISRFTKIF
PEEAGFKLIRKKSQIYEIDSSQYKGKYGTFDSELALQNDSLEFLAFGHLL
IDRTVSYLIQNQKGWGVSFHSVSNKEYYVFLVEFQFILNRTELFYFETNP
ETGSVRQIEGLPAELRKSHSLSKSSASESSHVELPTNLEESLIRTFLVLD
EIVEFRKKELGDQTLDLFQKEEFKIRTSNQNTLRQLEEKLMRQEAAFKWE
GKPEKKSAMNRTRNEIQKVKEDFDFELRKVRNGKTIQHRFQLFQVYLPNR
V
>LBL_1087 Transcriptional regulator, HTH domain
MNAVYRVYVFFKDFYFSKVPFLRRKRLNSLSGQAKSNIGGEISDEERKSF
FNQLRAARIEVNLTQAQVSERLGKYQSYISKVESGKKRLFIEDFIRLCEL
YNKPPEYFYSVFSK
>LBL_0695 AraC-family transcriptional regulator
MTEFHSIFDINTIGILDYESFLKLGMFYFHAFGVVIGFLLGFSKFFSSDG
FSKSYGSVLQSAAFFLILNNGILIDQGTLRHEYKITFGSYYGLVLYSSLA
VFVCFQYVLESLDNPWIYCKRLLGIIPVTVLFSYFIPNLHFISFIDTLGF
GISIFTFVWSLRKVLKSNKSILYFNLPFLSLLISICFVFDFLGTMFDKKD
FFFITEIIPGSAICYTILLERFFPSLFSKVTIPDINKDKEIELETIPKVK
EIKKYKYPSRDLLEGIDLEKVKTKLNHFLDSKGFIDEELRLPDFATDVGL
TTHQASYYLNRYLNMSFTDFLQFHRINEVKNMIRINANFNLLNIALECGF
NSASSFHRACIKFTGKSPRRLKKEIFLNESSSLTIPQKSKTQSDSFKDVD
S
>LBL_4111 Serine phosphatase RsbU, regulator of sigma subunit
MSERQLSLSLISNITAKINSTDNLEELLNIIIETTKDVLNTEGCSLLLYD
RNEDCLVFNIAKGTKEKSLTELKVPRGKGIAGMVLETLEPVIVNDAKNDP
RIYRNIDETVGFVTYNLICVPMSTQGEIQGVLEAVNSLERKEFTNKDIKI
LQYLSDLAAIAIRNRRLIRDLKSRANELDCLFQLSQAISNISEMDQFFNL
TVNSVSEIMGAERVSLIFFNPKNGKYELKKSIGFSLKEEEHFINEKEGVI
RKVIETGKPILVQNTSSIMEDCVRPERYKTKSFISVPIRQDGKIIGILNS
ADKKSGNNFDNADQNVLSTISNQIAEAYNSLLSKEQKEKLNSIHRDMQIA
SQIQVNSLPNIPKKIQGLELETSYIASKEIGGDFYDLIYHNPDEVSVLIA
DVSGKGIAAALFMEFSKTIIAGEVSRNSSTSISLMSANRIIQEKSGYFMF
VTVMLARINMAKRKICYSSAGHNEQLLYKAKEKNVVSLSGKGMPLGIKES
EIDEHELDYYPGDLLILYTDGVSEAMNESNEMYGLENLTKLIERNGDMPL
GALKELIIDTTDAFRGDADPHDDYTLFMIRLP
>LBL_2441 RNA polymerase sigma subunit
MMTESEFTEIVSSTREIVLSAIEKNLAERFSYAIDDVAQETYFRVYKALK
KDQFRKESKLSTWLYTIARNESLRMNDKLRKEEDFLISHTDLNENSKRLN
SQEMIGTLRALLVKIPDKYRKVLEFYLAGYSESQIAETMGVKPGTVKSRA
FRGKEMIKRVGIKEKFYEK
>LBL_2587 RNA-binding protein
MPINIYVGNLSYDLNEGTLGDLFRVHGTVNSVKIITDQYSGKSKGFGFVE
MPNKDEADKAIKDLDGKNVLTRNLKVNVAKPKNDRF
>LBL_2801 Transcriptional regulator, AcrR-family
MRSGGDTKEKIVTIARDYFQSVGFQSFSFQDIANDLGIKKASIHYYYPSK
EKLGLEILEAYDKDFKKYIENIRERSPRVRLFGLFKLYVSYAGENGNICP
FGVVGTEYHVLSQTIRDKTLILQNQHRDFLIQTLYDGVKDGSFVLTLSIR
DTADLFISAIQGAMQISRIRKDKEYFPKMIQSLKSMIQMKEHKNAGF
>LBL_0988 Hypothetical protein
MKSFRSHLKTKIKNEKFKEKFQEEKELINLSLELHDLREKKGLSQSELAK
MAHVTQQQLSKIENGVNCNLATFLKVCHALDLEVKVKSRKNIVRALLSES
YDSKVLGQVLRELSNKVQNPFR
>LBL_1303 Transcriptional regulator
MKNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQSCVK
YLKTTLERLFNEQPVEDVYPEFTEGLTNRLWAKRRELGIKQYDMAKKLKV
STPFLSKVELGLLEPPEDFKNMASKALKMKKEELFLQKVEY
>LBL_1396 Sigma factor PP2C-like phosphatase
MNLTDYIKSYFQRVGWLLLSINLICLTIAIGFLQTQPFSPKVRIVLYLFI
LIFIYLVNYVSFILFSTEKILPKEKIQETTTKRYRKGDYRMQNYLFPVPI
DDENYEIYGRTLTYNPIGGDFYNFLTDAQENYWIGIGDSVGHGYQAGIFS
MMIFQKMALLVKHDSDPYRVIEDINEDLLKRTEQNPTINSSLYATFLLIK
ADKQGNVEHSGLHPSFVIYKKRTGENRIVETDGKFISTTMNACLKNVQSK
NCFHLESGDIVFCFTDGLYEQKNNGNLYFGESLFRFLEGVPKNHLGKIAD
DLFTEILKHTNGRIQDDMTILMIRKK
>LBL_3001 RNA polymerase sigma subunit
MVILNDQPQEKIKPDWPDLIRRSFAGNREVLDQLLASLQPFVFNLAQKML
LNPDDAADATQEILLKVVLGLQTYDANKAKFTTWAYAIARNQLLKFRTGK
IEALTGSFDQFAEEIHAVADEVIEARELQNPETQLLVKEANVGCMLGILL
CLTREQRMVFILGEFFSLKSDVAGEICGVSSENYRQQLSRARKDLYSFMH
NKCGLVNKANPCRCHRKTRGFIKAGYVDPQNIRFAAHHYKNARIFSEEHA
DAMCDLDDEYGQLFRRLPAYDAGRALLTVQNLLNNEQFKDTFKV
>LBL_1897 RNA binding protein
MKISVGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTGRSLSYGSVEMD
DSAGTQAIAALNKKEIQGKQIAVIDSEELKREFEKKQSVKGGGASGKIHG
NQSKFGGFSGAGVRRTGGRGK
>LBL_0290 RNA polymerase sigma subunit
MNLSKDKTIDLVSRCGDGEEEALRQFFEIYSEDIYNFPMKIFHLSEDDAG
DFFIYAFERLKTGSRFGSFKGKSSFRTWFYSVLRNMLIDWQRTKRELKVT
NLGKISKEGKEYATIEDEPDTRPEMQEEASEFSDRFNQALEEIGVDKRVI
FKLSYIYYLNLNEDEVQYLLEKTGLTPDALKEKILHLRSELSNREEENIR
MEDKITTLYLNILELKEKQQNTAKIAPILPMEVDKTSHALKKKYEQRKKL
LEKKKKGHFLARTPYREVADLIGISEGNVSVTLLRLIEKIQKKLDFSDLD
F
>LBL_2167 Transcriptional regulator/sugar kinase
MKSYLGIDIGAGSIKASLVAEDGTILGSTSRTTGAETDETQFLDSLAGIV
SEMKNSSLAAVGIGSPGPIDCENGILIQSANLPLLKNVALVDHLKKKFSI
PVYYNNDANLAALGEYRFGLGKGSPSLVILTLGTGLGGGWVYQGKLFDGY
KGSGMEAGHVTYIPNGPLCGCGQRGCTEAYFSASGFLNRYQEKTGNSLNS
AEEFFDRNRKGETVASILLNEGIEALAQLCRGLIHTINPEKIVFTGGLVY
SWDLFGNSLKERIQELIFPIFRTYTQILPGGNISGTLGAAALCMENQK
>LBL_4013 Response regulator of a two component regulatory system
MRAKLLLVEDDRSLGETLQERLQKEGYEVFWTVSAIFAKKLVKDEKPHLI
LLDVRLPDGDGFTLAEELKKTKDCPPFLFLTAQAGAPERLRGFELGAEEF
IPKPFHLKELLLRVKHVLESHKHSIEETRFFYKDYVLDFRGFQVRKGSEE
FPLSKRDCALLHFLVTERNRTISRAEILDKLWGEESFPTNRTIDNSIVRL
RHAFGKEGERVIRSVRGVGYQWTGEIKDAK
>LBL_0343 Transcriptional regulator, ArsR family
MADDTRREIVKLVAKNGELTSTEISQNFKMSPPAISQHLKVLKEAKVLHM
KKEAQKRIYSLNNSGMNEMENWLLDIKNLWNKRLDNLDKYVLKIKKEKFR
DKK
>LBL_0785 Transcriptional regulator, AcrR-family
MEQDEVKHRIMDKALELFLKYGYAKTKMEEIARILKISRKTLYKHFENKN
HLLFEILSHKHNLMNTKLGQISEDDSLPVHEKIQAINEFKISQFPAGANE
LIMEIRDQAPDHYAYIKKVKMESVSKTVQALVEQGIERGEIRKDLDPTIF
AALLNSAIEITATPELLLNSSYSMMQLQGEIHEILFYGIMNSPEAVERS
>LBL_4253 Transcriptional regulator, AcrR-family
MKSSRSKSNNPQMKDNFVSEVTIRKRNRAATETSILLAAIQVFAKKGYDA
ANTKDIAKLANANEALIFRYFGNKKGLLEAILTRSEDIKQENSLSSRVRK
TSKNYQDLEASIRYLISGKCKDFKDAEDFMKVAVSQIILDPEVSQIIQKK
IYTKALPEFITELEKFKKAGKINPKADLKSAAYAISSFAFALGFMGQCVY
KIPPSEIQATIKEVARIFRKGLEPGPTKKKSK
>LBL_0222 Acetyltransferase
MKPTVAEITENYVKLHKALSKLIKASIFNYKSFDFYSNPDSHWFTRAILK
GNPSLSDLSSEIEDLRNKGFHPNILDFLNTITHEISIRELGYNSRNEQVG
MFLKGDPISFNKKSNMELDIRKIRTKKDLKVWLGILNDSFRSDDRENLYL
KLLNQNSFRLYGGFINGQMTTTGMTFYDGKSFGLYSITTDRDHRGFGHAS
ALIEHILGEIRKKFPGFIILHATEMGKGIYEKFGFEKSTLLRHWSIY
>LBL_2989 Transcription antiterminator
MIENSKVNEWYALYTNPRAEKKLKRLLQERKIECFLPLISKKKKWSDRWK
VVEEPMYPSYIFVKISFFQDRVKILQLPGAHHFVFYSGKPYVIPDEDLNL
IRIFLETYPDRIQVEIQERLLPGKKILIQEGPFAGFKAEIIQRKNEKQII
VKFPGMNLMTSVTLDIKTLKLEETLGSNF
>LBL_2820 Transcriptional regulator, AcrR-family
MERLSSRERLIQTTAQLLQEKGYYGTGLKDILKLSGTPSGSLYHYFPDGK
EELTAAAIRSAGRRLEKQIETTIENHPDLYRALQEITSRLSQELIDSDFQ
KGCSSIYLKWQNLLSTFLQRSEMKEDQVKPVSILLLAVIEGALVLCRANR
SIEPLEIVSKQLENILNILT
>LBL_2382 Serine phosphatase, regulator of sigma subunit
MSSQDYSLYTVLAVDDSEINLKLIVHTLKPLGFQIFTAESAADARSVLLT
NRVDVLLLDVSMPDQDGFSFCRELREIERFKLLPILFITGINREVGFDEA
ISHGGDDFIQKPFQPKELIAKIRAFIRIKILQDEVLEQKRNYERELIMAR
KVQQELLPEKELEWNGVSVSTIFQPLMQIGGDYTDAWIENDSLHIFIADC
SGHGPSAALLAAMLKMQVSSLSPNQSLQEKVQTLRHNLEKILPDEFSITF
FYGILRKDLNFEYSNGGHPPPILYQNGEVTILSGMGPLIIPIEINVKEEF
KSVRFEKGSYLLLYTDGATEITDKSMNILGEEKLKKIFQESVSKEGDILV
SMMEAILAHSDRGTNDDDIAMMVLKL
>LBL_4073 AraC-family transcriptional regulator
MNTLIQNFLNYMYNLKILSDFEARISLKKFTLQRLIEKNIFFTFVFFFVV
YLAIWNQTIPEIATSQDLSKFKLISLICGISVYSFLLLRLVILTILGIQV
SCQIILRNAAFAIVLSCLFLMYFEKSFSMVITGELFCFGVCAFTVLESGY
LIHFRNFKKEYYSLLPILGGIGFGALLNLIGTLFYNVYWNNISYYTYMFS
IFILYLLKRKIKIQNETDVQKPILNPEIQEIIEQTSPKLEMEVFESNEYA
VEEKNLLKEDDLKRAEDRIKGFIQEKLYADDSIRLIDLSAYLGISLHQAS
FYLNNYKNIGFSDFINQNRINDAIRLLVEKRNMNLLDIAFECGFNSYTSF
HRACKKWTGYSPKGLRINTFLTNGSKNEHLNVPINSHKVEVLVNNFKSNG
>LBL_2531 Transcriptional regulator, AcrR-family
MKTRPNKKKESGTGVRERILDTVTSLFYKQGFSNTGMRQIIQESNSVAAS
LYDHYPSKKELGLAYLSRQEEKTLSDLQDLMDRYPDLGEFLRAWVILKEK
QIRHGEFVGCPFAGFASQVMDSDPEYTEFLKDIVTKWTRIISDYLQKAIG
SGQLKRNMDIQYVARRILMAYHGSVTMWRMTKELRFIREMDHSLREIVEE
YRIF
>LBL_0902 Sigma factor regulatory protein
MTWIKQFSKLKSGFLNPFTFFEREFNYGEAQSWKDQTKIDQSFIRLAFLL
HFMMYSTFAISEVRNSERGILYLGVIFLVNVMSLALSFQEKFLSWVIHIS
NTVIIFFMMNLFHESFYGFQDLENLQIYNNYFLLISLIVIFQMFRLKKSS
CLLTGMISICLHIIFVSIKRMELGLEDFPIILFVPDVVYGLCIVIGTSSV
IIVKRLISISSELDLEYKYIQQDLTVAKQVQENLFPGRLSIKGIRYEVMR
ITPNHIGGDFFDFVQLREGNTGIFLTDVAGHGIASALVASMVKIMVSTMP
YILKVHPSRLMDYIDDSLNEQFHSYHASAIYMFLDFISREVTFSNAGHPY
LIRGSFQKEFHEVETEGAILGFGIKKPIAEQVKLPLVAQDRFFLYTDGLI
ENKNREGKLLGTEGLLEILNGNRFEKDLGVFKANVQKAVENFFGNVALED
DTLFLIVEVE
>LBL_2641 Transcriptional regulator
MEETYNGKILISNSSIVMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIG
DVIQGIPDHVSHTLPIYSGGPVDPTFISVLHEDKKISQPGIEVIPGLYLA
RSYDTLLELLKSTSKFHVYQGYSGWSAGQLETEMNRKSWVVHEATKDFVL
NQDPETTWQEALKSKGGIYKYFVEHTKDPMLN
>LBL_2389 Transcriptional regulator, ArsR family
MVQQEEKTDQLSLTFAALADPTRRKILAFLRHGETTVKQLAKPFSMSLPA
ITKHLKVLEKAGLISRGREAQWRPARLEPGALKGVADWIDEYRQIWEAGL
DRLDKYLQEFQKMQTNQGRKTDYESGKN
>LBL_2312 Receiver component of a two-component response regulator
MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPNSQK
AIEDIPENIPDIVILDIGLPGKNGLECLKELKEKTPNTKYVIFTVFEDEE
KIVEAIQGGVSGYLLKDTPPELFLAELKVIILGGASLTPRIADKIIREFT
KKEENQNPPIQNTLGLTKRQLQILNFVALGMTVADIADELDISSHTVSRH
IEKIYKKMEVHSKSEAIIRGRRMGIIRDVPGYP
>LBL_1293 Transcriptional regulator, MarR family
MKEKLSKQSIDTWAAGLKFYTSASSKIESNLTKMKAISLTWYDVLYAVYT
KPKKRSRMSDIAQEIILSKSALTRSVDKLVAEGFLKRERSEEDAREFIIE
ITPSGIQALRDSWPIYEEGIREIFVSKLTPKETSELLRIFRKLNKY
>LBL_4076 AraC-family transcriptional regulator
MLNANTLFDTIFSEINLFYAHAAGVGTGIVMAITKLHAGRRDEFSKAYGT
ILLSVSIFLMTNNKVIFPQETDPRLMKDPMFLGIYFGLVLYASIAVLICI
MFILDGLENPWYYCKRLTVAIPITMVGAFFLPGTIYICFCDSATVLITLY
ASGWAIFKIHSSKKANVFFNFPFITLIITFSLILDLAGTLTSSTKMLMFS
ELIPGFMIAYITLIERFFPVLFNKTYIESNKTLADNQALSDFPVNNLIES
EENQTEFTRNILEGVELDKIEERINSFLQVRGYADEELRLPDFASYLGLS
THQASYYLNKHMSMKFADFLNMNRIEDVKRNLRDKSHMNLLQVALECGFN
SASLFHRACVKFTGKSPREFRKELISSQN
>LBL_0589 Transcriptional regulator, PadR family
MTLKEESLEAKGITPAMFHILLSLAEGPQHGYGIGKSIETSSGGNFRLGP
GTLYRTLESIRGFGWIRYSRKKILENDDTRRLYYEITSDGKEILVSELKK
LEVTLKKAKKLKLLGN
>LBL_0203 RNA polymerase sigma subunit
MAHTSELKKLYNHNKDDLFHYIKKSFYDENSAQDILHDSFLNFFRYYEDK
SIPDPTSCRMILFRIARNLMINHAKSYYQRNVSLVGEDASSNFTSKTPSP
EFSVLEKIDQSDVKNIIDSLLDIISPEYKEVLLLRYQQDLKLEEISKILG
ISISGVSRLIERAEKALAQEGKKIGFQPGNYL
>LBL_0697 Hypothetical protein
MNFSIILKDLMSRKGWNQEDLAKAGEVKQPTVSRYLSGHTIPTLTFVVNL
YKNEKIDPIIFVRDFELDPIDLGLRKSREEKESLTKEVTVFLRFLKNSPD
ALEIFWKIYKMDQSGRKSMNALAERIIEE
>LBL_4085 Regulator of sigma subunit
MKKSLRLQIIVIYTILTVVNLTFVAVMIFENQTDLLISNFTLESDRVARE
ILKKVESFGNTSFEDSSQADEFQSKLLSIGLTNFSVIAAEDNSLEKTRTL
LSNGATASISDLKTKLTNMSNAKAALNTSYDIELDTDHFIVNLIFYLNPK
TFLISQIKMKEMVDRLRSLYIQLGLLLVWGFAFHILFGIFLYRKIFVRLF
LLKEVSETMATGNLNARISWNVSAHDELDVLGNTFNGMAEQISSQFDTLK
LKNAQIQTELEIGKNVQECFLPEKRKKFNLVNVEIVYQPMREVSGDIYDI
IEISDTRTAFFLADATGHGVSAALITSIIHYNVENIMKETVNPAHIFNRL
SDNLFEILQGTFFATGIFILFEKEEGYAYFCSAGHNPIYYYRKAQNKIVA
LESTGFVLGIGIPDEYNVLKIKTSPGDKILVYTDGVLDATNETTEQFGDD
RLLNTFQKYATLPTEELTEKIRNEIHSFANVFPDDVTFGILEIT
>LBL_1319 Sensor protein of a two-component response regulator
MRTILLTEDEPGIRDTIRVVLESEGFKMISAMTGKECLSLLKESPDLLVL
DVGLPDGNGFEILKELRKKNSIPVILLTARESELDRVLGLELGADDYMVK
PFSPRELVARIKAVLRRYDGSSEKKRTEFLTDEDRKIIYYYGKSLTLTPY
EYKTLLLFLKRPGKIFTREEIMDSVWTEPEESFDRAVDTVIKNIRSRLKE
IRPDTDPIETRRAQGYGLKEIV
>LBL_1838 RNA polymerase sigma subunit
MSKKYEKYNQQDETELWKSYRDTKDQDIRSYLVEKYSPLVKHVAGRIAIG
MPQNVEFDDLVSYGVFGLLDAIEKFDPDRLIKFKTYAMTRIRGSIFDELR
SIDWIPRSIRQKAKQLEQIIGMLENKEGQQVDDDAIAKELGISMEEYNSL
LTKISGTSLVSLNDIWFLGDENDEVSFMETLESPMNMNPDTIIEKEEIKN
VIVEAIKTLPEKEKKVIVLYYYEDLTLKEIGEVLEVTESRISQLHTRAVS
RLRSKLGKVKSVISRK
>LBL_1865 ParB-like protein
MKIRVSDIKVKNRIRKDLGDLGSLKESIQKLGLLHPILIDLNNTLISGER
RLQSVKTLGWEYVEVRIVDIRNKKERVQIEAEENNIRLEFTSEEQERVRE
LLKRYSYTTIFGRILSWILDLFDWLKRFFQKK
>LBL_2815 Bi-functional protein, with a transcription regulator domain
MLEKELSPVFKALSDESRRRILDILKNKPGISVGELTDFFEFSRFAVMKH
LKVLLEANLLKIEKKGKFRNIYLNAIPIQMIYDRWISQYSKHWASSLTQL
KYEIEGESRIMEELKQVYTLYIKTNANKLWDTLIQSSITPEWFDGMAVTF
EPKVGAKLTYDIKGQDGNKLSVVEGNVLEFDPQKKLAYTFRLSAEPKATK
DRASRVTYELEPSGPDSVKLTVTHDDFDGKTTTFFGVSQGWPRHLSNLKT
YLETGKGMNLPSMH
>LBL_4072 Transcriptional regulator, AcrR-family
MRLFLSAGFAKTNTDEIAKHIGISKRTLYRYYDAKEKLINAVFNFLKERI
TTQHEAIIKDKSKNPREKLNEILLIITELGSKMGKPFVNDIQNFRPDLFM
MMQEFRKERLRRLADIIKEGQDSGIFRKELNRELTIDTLIAALDGIINPK
YLSETTFSISSAFDTVFNIFIHGIENEKNNSQFKNPILHSHLDTDAHILF
FQIMDFDTEQEISSNGVIDLQSIRGKKNLFG
>LBL_2870 Response regulator
MKLLILDSGTTFRKIISSFFPAEDFQIVEAGSAKEGLDLTFRENFDLITI
GMILPDSDGFTICKTIRNDLRENKYNACKNSKIYLVTSGDVESNRTKSME
FGFDGIFPKPSGIEELKLVIKEIIKFSYQKNSIEQRKVGKILIVDDSELN
LLLLGKILERNGYSFQAFTEGKKAYEYLQTSGENISYILTDWIMPGFSGQ
ELVETIRKQEKFDKIPITVITGLEENVGLNISVSQKNVSILQKPYFERKI
LEYIRKV
>LBL_4259 Response regulator
MKTILVIEDDPDIGNLIRKSLDSAHYSTTLQTSGEEGLKFYKANHPDMVI
LDLSLPDIDGIEVCRTVRRNDENTPIFIVTARNEEIDRIMGLELGADDYI
TKPFSVRELKTRVDVFFRRWDKKAGIKPNVGASGEIIRGALKIDPVRRRV
TLKDNIVNISRKEFDILQLMAASPGKVFSREMILEAVWGMEWDGFERMID
SHVKRIRSKLEKNSAQPEWIETIWGIGYRFTDNYDNIVIPD
>LBL_4001 ParB-like protein
MSSKSKRLGSLADVFQAEKLEGTIRKIRLDKILPSENQPRQDRKKGIEDL
ARSLDKDGLLQPIIVTKQNPEDENYKIVAGERRYHAAKQLGWAEIECKIL
DRDEKETFRLAIIENLQRENLSPYEEVEAMSHLKNSFKYTDQELGTLFGK
SRSYMTELLGISNLSKEELRSCKEAGIESKNLLIQAVAASRKGTFSEFLN
LFQTGALKTVKDAKSFNREEENLSTPKITSATNPKVSNLNSTEYKITKKQ
GLIQISSDNEELLGNIFKLIKKEIRKKFNSI
>LBL_1164 Transcriptional regulator
MDDALRHKLLRILEENPEVNQREISEILGISLGKVNYCLKALMDKGWIKA
KNFKNSNNKFAYAYFLTPMGIEEKARITVRYLKMKIQEYEQIQKEIEELK
KEVGED
>LBL_0036 Transcriptional regulator, AcrR-family
MQIVNREKNADPLNPRKEPSRKRSINRVQRILDVVVGLLEKNGVEAITTN
MIAAEASIPIGSLYQYFPNKHAVLNAVGQRHLERINSMLSEIFQSDLTGK
SWEDLVDLVIDSFANFYLTEPGFAPLWSSMKQDFKLQENNLKISENVSTI
LSQFNVNLAENRIISKIIVEVTDAILNLWIREQNNHRIKDHFKILSDSIL
PRRTKLP
>LBL_1900 Serine phosphatase sigma subunit regulator
MDGSRQSEQKGHGDPRYSILFEIDSIIFLDGNFRVILANSATEKTFGYLS
SELIGNSIEHLFSLRIRKRFYRILKNIAELPDKRSQKPFGPIRMIRKDKT
VLISEISVSVTGPEEDYQYHVIIRNISEKHRILMDLKRANESLRKMDREK
EELLEKLEEKVRQRSRLLAGYYKGMKEELNLAKKLQTEILSDIPSVAGIQ
IHSMYLPMMEVGGDLYDLFQIRPGALRVFLADATGHGIQAALLTMTLKGI
LESIKKKDTDPGTILTEFNHEYCRNFGNIGMFFSCFLADIDTVSKKISYA
SGGHSTQFFLSKDLVLGLDRTGSLLGLDSNNRYGVFKFSYQYGDRLFLFT
DGIYEEFNSDKQQFGELAVQNILAKKFSEPMEETIPAILQSLIEHLGSQK
IQDDITAILLALNFPDL
>LBL_0113 Transcriptional regulator, AraC family
MYKNSNFKTFILIFGISFSSIFAHTEPVVLLDQDTSSKNISSLIEYRYRD
QKFAGCSPNHIDGLEDLEWHSISADVLRVKRTSFGNWLRFSVQNSEPTIQ
NRILLLGWLNVPDTQLCFFDKNGKFVSVKSGYSNPTTDEKILTTLPHFKI
DLQPNENRIFYLFVLSNEDINYRIRIMGLEEFELHKRLKFITSYSIVGII
GFAVLYSFFGYYRFKNSTFIFFPLYVFSVILTFYFLHGRTFAEVFGNTNN
LFRHSYFLFLGTSYVFLFLYLFAIDKANQKKVYRSVFFWIAGAFGILYSL
IPLLQSWYDHRILLLVATVGLSFFYFIRVHYQFFSSNSSIGLLYTTSWAI
FLVLDTYKTIFHFDFYPFNYFSVFGVVLFFPFHSILVSFSLNEFFNRRKN
QEIVGKEFAQARKSITSSLNVNEVVQNIKDLLEKKKVFLQKSLKEENIAK
ELGLNLHQLSEIVNVEFGNNFPSLINQYRIEEAKKLLLDHPEKTTSEIGS
RAGFSSKSTFYMEFKKFTGTNPNAYRRKKLKSEAAFNKNI
>LBL_0557 Transcriptional regulator, AcrR-family
MFRKDGSPLYPLNRDYKNSRERILEGAAIAFSRSGFHGTSLREISKECGL
EQPSIYHHFHSKENLFRKTLIATHLLVLNEIRRRVIRDQGLHVEVVSIFK
AVAETAKIYPDKTRLPFSLIYSAPVNLQNEYTERYGNQYRKLLEAAFERN
DRIGRKEEKLSLCVDLLYSLILACSVEVLYLDRVSGLEDRVRLILEF
>LBL_0335 Receiver component of a response regulator
MKVAPTYSILLAEDDENNAELLIRYLERYNFDVDHVIDGVAAEIRLRKTR
YDLILTDNRMPKFDGIDLLERIPEMNEATPIIFLTVSNEKETIIQAAHNK
KLVAYLLKPIDMRVLIEKICQALKIGAGSLIDKKEYPFEIILLNHTQQGV
EIELKGCPYGKNIEKLVQEISLFLKELSKPNSILIKVNPEFFYFKNGTQV
LYALKVRLATKYEIGKEDVIIQTEH
>LBL_2102 Transcriptional regulator
MIEALLFVSGEPLKLASIAKSAGIEKIDAREILDELVLDYSEKNGGFLLK
EIAGAYQFVTNESFAKLLGNVFREKRREQLSKSSLDTLAIIAYKQPITLP
EIDEIRGVSSRAMVTSLISKKLIKPIGNKEVPGRPALYGTTKEFLIHFGL
NKLSDLPAPVEVKELKFENLDDLLEHE
>LBL_0187 Transcriptional regulator
MGTHYKGNNRETAVLNAFIKLSRCSDSIRQLEEKIFSKYGLTTGQFGCLE
SLIHLGPMCQKEIGQKLFSCEGNITQIVDNLEKRKLVQRVRSKEDRRYVI
IHLTPKGRKLVEEAFPDLLVSLVHKFDSLSENQLLDLGDYCKEIGLKAV
>LBL_0791 Serine phosphatase RsbU, regulator of sigma subunit
MPQTVLESLKLKSILSTSTILNANLDLYQLLPLIMLYSKDLLEADASSLF
LLDETEEFLYCEVALGEKGEIIQKYGRLDIGEGIAGWVAKEKKPIILEDA
YSDSRFNPSWDQKTGYRTRSLVCVPLFIENKIIGTLEILNKTQNRSFNAC
DLNYLTSLSEVAAIAIQNAKIHENLKKRILELSLLYEFEKLIVSEKSIHE
LGSWVLERVLEFLEAKTGTIYIADHTSQTLRILAAKGIPKDAIHTIIVPF
GEGVAGWVAKERKNLLIQNLEEDKRYNLNVKYKFEANSLISSPLIYKDEL
LGVISVNNKKSGFAFHKNDLEMLGAIANRLSMTIKNADLFHKVVNSDREL
QRAREVMSKVIPTTIPYIKGLEVGAEHIPYSNVGGDFYSIFKLDSERTGF
LVADVSGHGLSASVIATVMNTIISTYDKEILSSPSQFFSGLNHALNNKMV
GNFVTAFYCVIDTKKDTILYSNAGHNYPLLLQNSTDSMISLETKGKLIGI
ISDLFFEEKSIHFKIGDRLVLYTDGISEHYSDDRTKRYSEEFISISIHKC
ASKTAQETSAQIISDCIEYCNYSKFSDDVTLLVIDRK
>LBL_1086 Transcriptional regulator
MIHEVLRLLRVFHDLKAKDLAEKLSISPSYLSEIENGKKEPTLELLNKYS
VVFNMPVSSIFLLSEGTEKQSDKKSFKGSLSKLIINFLHKVEGEENAHSS
R
>LBL_4021 ParB-like protein
MAKRSDFAGMDLLTAFGEKESSSSEIQVSDIVPNPSQPRVFGKEEVSDLV
ESMKRLGLIEPIVVRKQGKKYQIVAGERRYQAAKVLKWNTITAIETSASE
DRCFEMALAENEKRKSLNPWEVGRAIQFLRKEKRKTAEEVSKVLGFTERY
VKQLSSIARLDQKSVQDLIRSGKDPSVKNLEALLKQKEGRGGEMISSRKS
VPTKMTIQLVGLTLQQREKFLKELSSLKKKYGIKN
>LBL_1985 Transcriptional regulator, AcrR-family
MAKDTRDLILKTSLKLFSEQGYHGTTMRQVASKAGMSLGLAYRYFDSKEA
ILEGIIESHDKILKRYITDEVVSNPSREDLIVNVSESIISLVKENEDYLR
LYWNLMLQPKIHRLKRRNIRLVNMIFFETSKKTIRSIKPNYTEFEIKNLA
STTIGYMINYLTNKKEFSLDDFRNYLVHTLKNT
>LBL_1524 Transcriptional regulator, ArsR family
MSKEKSALKKNQLESAIRGIKGIAHPDRLQILFFLSQKEHSVGELVDLLG
ISQSAASQHLSKMKINGILSSRKESNQVFYYLKDGKYKDLIRTIIKIYG
>LBL_2926 Conserved hypothetical protein
MYKKFSDRLKRLIETLGFSQAEFARSIDLKPAFISDLINERAKSFSQESL
LRLRIVHNVNPLWLIAGEGEMLITEIEMKTDFDTDRYRTILRKIRTRPQI
EILLESLLEVPDSELEALGLIIEKFRKKK
>LBL_0908 RNA polymerase sigma subunit
MDSSSTKIEQKQIIPKKPTLREIEIGLLKKIKEGDDEAYIQLVNPFRERL
YRKAVSMVKDGDDAEDIVQDALISGYRSIRNFRADSGVYTWLYRIVVNKS
KDMLAKRKRAKENSMDDKEYQVTDDRVGFEKKIELSDESNYLISKINGLE
DLYKEVIELRYFEEMSYAQIAEVLGTNVGTVKSRLFKAKEFLKHLILQDD
KGEGYFR
>LBL_1008 Transcriptional regulator
MNPTMEEIETDKESSSSEHITEVVKENLKLIRHTKGFSLDKLASRCGVSR
AMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKEKGAEGVIVMKAENTK
VLFSSSKVFSSRALFPFNGNRKTEFYELILKPGGIEVAEPHSSGTTENII
VVSGKLRLRVGEKVVELEPKDSVFFRADIPHEYSNPTDQETLMYLVMDYR
DEIN
>LBL_2009 Transcriptional regulator, AcrR-family
MAAVEIFAQKGFSAATTGEIAKKAGVAEGLIFKYFKSKKELLLSLVLPIL
KDFIAPISLKRLQAIFTREFSTLEEFLTAIFEERVTFIVKNRHLIRVIFQ
EASTTFEIQAVLKRVFKEKLAPKLKECLKNFQEKGMIIDMPIDSLFRLIA
TNIAGYVLFTEILYRPEAEGEGYSDQEVELKRTIEFIARGLRPNTKAKPA
LKPRAKKKPSVPTTTKVKKKRNLSIGADSYQEFV
>LBL_1942 Transcriptional regulator
MTSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNRG
IVRNQMGPNGGYVLAKTPSAINLKEIYVAIDEKIFQMHSKSPNKKCICGH
AIQPILSKVYEKAQKVLEDELGSTNLDLIAREILSFSKK
>LBL_1617 Transcriptional regulator, AcrR-family
MPKIVNHEKYKTEILSKCVDILARRGYSAVSMREIATELDVSTGALYHYF
ATKEDIFKELVKFLLNKDVEEIQLYSKGNLGQALESKVESLFQMIQDRET
YFQNLLYIICDASRLKNHEEEKSLIADAMKEYVNIISKHFGITNPGLSRI
LISVILGTVIQRIVDEDGVNLSDSSEIMKDFLSILLSNSFTF
>LBL_2769 Serine/threonine kinase with GAF domain
MKLQLHGFKTLGYFSVDHQFLIYRSLDQRSGKRVLLKLLRQKKPTIKDIQ
KVYHDFRISNFVKGLRIQNSLELIRHEGIPILVIEDCDSVPLSRLFPNGV
NSIEKFFEIAMGISLALKEIHEKKILHQALRPDNIWVQAKTGIVKITDFS
SATFSDKEISISITPDLPVEILSYISPELTGRLSRIPSFRTDFYSLGVVF
YQMITGILPFISRNGNEILHAHLARKPTPVHIIRKELPITISLVISKLLK
KDPDQRYASIDGLIYDLKLCLQNFQKRGIDSTFIPGSRDIPELIFDSSIL
HGRDKEKAVLESSFNKVLQGDTELVFITGDSGCGKSALAKIFLKSISERG
GIIIQGKFDQYERSIPFGGLMHSLRDLVPILLSKEEKEIRKLKRLINQYI
GDNGKILLDQLPELEFILGPQPELSELPPDENRNRFYYTFHNFIRTLSEM
SRPLVLYMDDLQWADPASLNLIETFFIHSKIKNFLCILSFRPEAVESPNP
FSGILKSIETNKIQKSLITIDSLDKKSVYRLIQDLVPSPEEQIRSVASIL
HKKTLGNPLAIIQLLRTCKKTNIISYEFESQLWKWDLEKVDSLSAADNVV
DFLCDRIKELTPEIQELLGICSCLGEQFTLEFISKLSFFDIPKLNQTLWE
AVKEGLLVPFHNQNQSIFEKSLSSERTFGFSHDRVRQAAYSLLKESKRKK
FHKQAGLTLLAIHGPQPKNRILFEITNHLNQALDQIEEETLRNNLTILNY
KTGLQAKSLGSYESSLQYLNSALKNQEICIKDLEFYSNVILETAETEYLL
NNYERAISLLGLLENLSISNLQYIRANMIRVRLYSKMNKVEKAVSAGLCA
MKRCKIHIPSSRFKINLALFKELFLSLILSKGKSDFELAHLKENSEPEYQ
ALIDLFADLGPSAFTYNQNLFVLLALKIFNISLTKGISRSSPIAYSGYGM
IVNQILKDPNQGIRYSKIAMDLNERIPFDLVKWKVQYVYSAYLCHWKKHI
TPDIKLLDEVHKGALQNGDILYAGFSLQAKIQKKIFSSYPIEELLIHADF
AERYFRTTRDNFAFTIAKSSHQLLKALAGKTSSPNSLNDSEFQTENFERK
ILRDKNYTALFYYYHDLTKLHYFSGQFSKALSYGQKGEDLIQNAFGLIPF
AEFWFYYGLTILANFEEFPFSYRIIYSKKLNLIFSYFTQWSKNCPENFMG
LLELLHAERERVRKKTSEAITGYEKAIKLFQEAGFVSFQALSSEIAARFH
YKIGNFSLGNHYIRLAINFYSEWGASAKVIDLKNRFAKRLNPTFYHETTQ
KKLNNPNTSLDQEVVLKTYNVLSEEIVLDNLLKKLIQIAIETAGATRAIY
FHLHNKNLTVYLTGQSGETEIIVENFPEIDETQYPVSYLNYVFRTHRIIS
TRELDSSLIKDFTDPYIKEKKPQSMICIPLLHTGELKGILYLENQLVKGV
FTENNIQTLKLIAGQAAILIENANLYAELETKVEKRTAELNNTINLLQKD
LLYAQKIQDKILPKPEATLDKIYILTKYVPMTQVGGDIYDYAEISPGKVR
IFLADATGHGVQAALVTMLIKSEYESLKYLDLPPGKIISELNQEIIAKYK
TLKSFFSCLVADIDVEQGILSYSAAGHPDQFYLSGNTIIRLPRSGPIIGI
LENTKYNSQFLEISKGNKLFFFSDGMTEEFNPFHEEFGDRRLSESILKQA
SKPVSEIVQFVFEDLQSFLSGQKIQDDITFLSVEIL
>LBL_2374 greA, greA transcription elongation factor-related protein
MSNEISATTESRPASDLDKLTSLFNEEIYVRTDASSIPASKFKIFDDLIE
FYKSAGKIDEAKRKIEEYLSEHEDSISARYLLGILSLERGEISDSGLLKN
LLESFKVAGKWAIIEHITDQILKYGDQRLALKYKAEALEKLKKNKELKVV
LEKLAKHDRKNPEILKKYALSILEENKERAITYLKQAIETFAKTKDYVQL
EEIWSIIVSNNHEDLQFFERIERIMLGHRERTRLVGYLYPIVEPYKQLED
WDKVIYLLKKILEHEASSNKARNELIRAYKAKYANHSLLEDFLKMSEIGN
NRKPIKVCIANFERNIVFDTNNYVLHRNWGVGKITSISPNGDSIFVDFKD
KKDHKLSIQMAITSLKPLKKDHIWVKYYENKEEIVDLFQNNIPDFFKELL
TSFNNRMLTADIKSEVAGKFLPALEWSKWWNKAKNIIKKEPNIGFDPKKK
DELVYREKAISLSEELSEKFTHQTDANKKLDIAMEALDNREDAEGAIEAF
NHFYYEEEEAADPVRKIVAFLYLQAASEELGDEEIPRHLSEQKIAELIKS
LPVNNLTEISTKIGNVEIKKSYVNLIRKHAHNPEEVLVGILFEVPIKVNK
YVFSILEEEGKFDLLNSFIKSAGTRAKEAPEVFIWVAKSILTKTWEGEWL
VSSRSEERLELILRVFRLFKPLAKIEDKGTKLKNACKEILHGNDDEVLRE
AIHSGDSEYIRKLYALYKEVPYFTDLEKERLYSLIVELKPDVAWDEDEDE
DEEGDDDILNRIPEGAILVTRRALNRKKEEFEHLLNVEMPENSKDIGEAQ
ERGDLRENAEYKAAMERQVQLQAAIKRLEAEIKSAIILDLTNVKTDKINI
GVTAKLKNESTGEVVAYSILGAWDADTEKHIISYQSPLAKSLLGKKVGDA
AVLNLTGAETRYTVLEIGRFSLQTQED
>LBL_2646 hrcA, Heat-inducible transcriptional repressor, HrcA
MDLTERHKRILKALVDEFIQENRPVGSKTLFDKHDIGLSPASIRTVLKDL
EDYGYLASKHTSGGRIPTERGYRFYVDSLVILYELTLKEKQRIQQEYLKM
QFKLDQILKATASVLSSLSNAAGIVIGPAKNLDTLKHLELIHVRGDEILM
ILVMRSGTVLHRNIFVDRNYSQEALYQVSKYLNDNLKGYDIYEIQNVVVP
NLMVRRDGPEDFTRIAELLSSAMNPDNSEVTLYIDGFKNLYANFRDEEQQ
LSQVLSLLDDQGFLKEFFSEYIDQDGVYTIIGKDGNRSMSGVSIITSNYK
MGEKKIGALGIIGPQRMDYNRALPLVDFTSKLVSEMVTRISK
>LBL_1071 lexA, Repressor lexA
MKDLTDKQQAVLAFITTIIKERGFPPTIREIGDEFGITAKGAYDHLKAIE
KKGYLKTAKNQSRAIELIRQSPMESIPVQATSIPVIGRVAAGLPIFADEN
IESYIPVPDEMAKGNVPMYALRVQGDSMIEVGIDSGDIAIIEKRDIARNG
EIVVALIEDEATLKVYYKEQDQIRLEARNPKYKPIKTKKATVIGKLVGLY
RIY
>LBL_2581 marR, Transcriptional regulator (MarR family)
MSPRLIIYMISRIRDEFHKHLNLELKEKGLSPLTTTHADILFALVKKKKA
QMQEIAKMINRDKSTLTALVDKLEVLGFVSRTKDSEDQRIVHLELTPKAS
SIRPVLLGISRSLVNNLYRGFTEDEKKELVRLLMKLYQNQNRESATAIEL
LQ
>LBL_1885 mfd, Transcription-repair coupling factor
MKDLLRIIGEGLFARFEFSFPAKKNPARKVKAAAAPERETDLFSVDQYPS
VNLSITGNVYSVTEGSHSILASSLFQKLNRTIVVVSENNTAAEFLFREAL
SFISASDLVYLPGQEVLPYEYLRYPSEMKRERIKAIGKILNGGPSLIFTS
VAGFLKTLPPVQTMQGRAITLEKGKEIDLESLLIQLIDLGYKRTDVCETF
GEFSLKGGILDIYSSYSQEPVRIDLFGEEIESIRTFDPDTQRSMVDLNRA
VLLPVDEYILSDEQKKEYQNILKYYSSSLHIPEIPEAGYGIYYEELVPLV
RENHGILSYFSEPPILLFPSPNSVNQRILHLEREYLSLFEKRSQEVLCAP
PDKLLSFGEEFRVLSELVGLSFVGLPPRNGSDLVSCLKEAPAFKGKIREV
REKISELRAEGGWKIVLTSSFEAQTKRLQGLFEKEGIVLLNEGATEPIPF
HLGKHKSDAFLVLSELRNGFIFENQKILILSENDIFGREYKRKTRFKKQN
SKALQSFIDLKEGDPVVHIHHGVGRFLKIERTNAGGKERDFLKLEYAGGD
SLFVPLDQISLIQRYIGGTESPRLDSLGKNTWKKTKDRVQKAVETLAEDL
VQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEAIEAVKKDLES
SVPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPTTILALQHYNT
FKNRFRNYPLRVELVSRFKTSAEIREILSDFSLGKIDMIIGTHAILSSKL
KPKNLGLLIIDEEQRFGVNHKEAIKRFKNLVDVLTLTATPIPRTLHMALT
GIRELSIIATPPKNRQSVETYVLEEDEDLIAEAIRNEIQRDGQVFYLYNR
VETIEQETKYLGEIVPEVSIGILHGQMTEDEIEETLLDFYNRKYDILVTT
TIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDRKAFAYLLLPK
DRVVTEQAEKRLNTIYEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIM
EVGFDLYVRMLEEAIARIKGEEVVVEVRTSVTLNTNFFIPETYISDTRQK
IEFYKKFEGARDLQEIDEVYREMVERFGDPPEDARTFILLEKIRTLASNL
GFESVTETKDEIKLKSGSYFKGDHSKIIQLISAGTGLTLNPREPNVLIFQ
IGKTSEKEKLDTLIFLLSEMLPSKKL
>LBL_2088 nusA, Transcription elongation factor
MAVKKTQSEGNLLEVIQQFCADKSLDREAVMGVIRDSLITAYKKKSGLEG
LEEFEESEKPSPVTVEFASGKDSVVIAIAKKVVEGTPSSALEIGLEDAKA
IDASAEIGSVISFREKPVELSRIISSQAKQMVFQRLKDMEKELLYNEYKA
KEGELTHGYFQRWKKDAMSIDLGKVEGIMPRREQNPGEKYHSGDRLKAII
QRVELRPREPIPVITLSRASADFVRKLFEMEIPEIYDGLVEIINVARQPS
IRTKVVVRATRGEIDPVGACVGMKGVRIQSIVRELGNERIDIVEASDDAS
EFIANAISPAKPVEVKVDGSGREAMVVVPDDQLSLAIGINGSNVKLASQL
AGYKIDIKTVAQYNAELASPEARERLERLFYSPAEEAKVAAPQEEEELTP
LEDLPGLSARIVGILKSEGIKDLETLIEYSQDDLAKLQGIGHTTAGQILK
LLRESVEWVEDN
>LBL_0634 nusB, Transcription antitermination protein
MSARRTSREIAVMALYQLELTGPPLKEVLKFKWYDKKTEPEERDFAVSIV
NGVVKNQEQIDTLIKKYSKNWDFSRISIVNKAILRLSVFALLYSWEVPKN
VTIDEAVELTKEFESEESARFVNGILDAILKNETKSDG
>LBL_0738 nusG, Transcription antiterminator
MGTKKWYALQTYSGHENKVQKNIEKLVQQKKLEEKIFQVKIPTMDVAEMK
NGKKKVTKRKLMPGYVLIEMEMDDDTRFLIQSLPSVSTFVGSKDGGPEPL
SLEEVKNLFSESGDVASEEPVAPKILFKVGDSLKIIDGPFANFTGLVDEI
FPDKGRLRVKVEIFGRSTPVELDYLQVKTEN
>LBL_2351 rho, Transcription termination factor Rho
MATVRRDNKNKHHNQNNNYSQNETTGSIEEESAGQESQDLESSDNADHRS
RKRKRGGYEGPTPAPIDLVELKKKAIADLIEAAKGLGVENTSGLKKQNLI
FAILQAQAERDGQVHAAGVMEKLPDGYGFLRSPDYNYVPGPDDIYVSPSQ
IKLFGLRTGDTVEGQIRPPKESERFFAMLRVETVNGYTPDVAGKRALFDN
LTPLYPNERLKMEYDPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTILM
QNIANAITSNHPECTLIVLLIDERPEEVTDMARHVRGEVVSSTFDEPAQR
HVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNQVIPTSGKILSGG
VDSNALHKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKGT
GNMEIHLDRKLSDKRIFPAIDINKSGTRKEELLITKDVLQKVFVLRKVLS
PMSITESMELLLEKMRLSKTNDAFLASMNTQ
>LBL_0940 rnc, Ribonuclease III
MVFKKTQPSPSLKNPERIQSFKKLSKKIGIKFSKIEYYNTAFIHSSYKNE
NPEILEDNERLEFLGDSVLGLVAARSLFQKYPKASEGELSRIKSKIVSTP
ILNSIAEKLNLGEYLLLGKGEKNSQGKGRRKIAANLFESLVGAIYLDRGF
EVAEKFIVQHLLEFAENPDMEESVRDYKTQLQEYSQKHFKTLPVYRMKGE
SGPDHSKMFQVSVRIRDQWEASGYGASKKIAEQNAAKELYIRIRRGF
>LBL_0480 rpoA, DNA-directed RNA polymerase, alpha subunit
MSLKSLLKGFKRPKKIEFNTEASTPNYGKFVAEPFERGFATTIGNSLRRT
LMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEE
KDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDL
EIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSD
YEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEELEEEDDELDE
ADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKH
YSDQCLQELKGKLSTLGLSFGMRDF
>LBL_0440 rpoA-1, DNA-directed RNA polymerase, alpha subunit
MSLKSLLKGFKRPKKIEFNTEASTPNYGKFVAEPFERGFATTIGNSLRRT
LMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEE
KDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDL
EIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSD
YEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEELEEEDDELDE
ADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKH
YSDQCLQELKGKLSTLGLSFGMRDF
>LBL_0743 rpoB, DNA-directed RNA polymerase, beta subunit
MYGQVERKRVNFGKITNLDYLPNLIQIQKRSFDWFLQADVKDETKRKHQG
LEAVFRETFPIESPNNDMIMEYSHYILGEPKRSPQECKDTDATFAMPLKA
VIRLIIKETGEIREQTVYMGDLPVMTEQGTFIINGAERVVVSQLHRSPGI
FFSYDMERDVFSARVIPYRGSWLEFEMDNKGILIAKIDRKKKFPATLLIK
SLGHGTNEEVLRLFYSSKKEKIAGATSKDLKKILGRRTINDIINMETGEV
MLEAGSKVNEDNISILKEMKVKEVELIEFPKGKDNPILINALEKDGVNDY
EDAILKFHSLMRQGEPSTIENATTELTRLFFSPKTFDLGEVGRYKINSKF
EFNNPKEFSGEKARVLRPADIIETVRYILNLFSETENYYPDDIDHLGNRR
IRSVGELISNQLKTGFSRVERVIKERMTVQEIETQTPQLLISIKPITAVI
NEFFGSSQLSQFMDQTNPLAELTHKRRLNALGPGGLSRDRAGMEVRDVHY
SHYGRMCPIETPEGPNIGLILSMSSYARVNDYGFLETPYRTVKNGKVTGQ
IEHLTADKEEYHYIAQASGVIDEKGELKNKLISTRHRGDFPFRNPSEIQY
MDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLREEAPFVGT
GMETRAAYDSRICIVNKHDGVVTSVDAETIVVERKGGKESDTYSLTKFKK
TNQGTCFNQKPIVGVVHSEINGKVSKVSKEKIEVTGENGELKEYVLQIGS
KQYAPIVSSGEEVKRGTTLAGQVVVGEKLDEMGNILVKGTVLADGPAVDN
GVLALGRNVLAAFMPWEGYNFEDAILISERIVRDDVFSSIHIEEFEIQAR
ETKLGPEQITRDIPNLSDKAFRDLDETGVIRIGAEVKPGDILVGMVTPKG
ETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGFEGTVIDIKRFSRENQDE
LPAGVEEMVKVFVARKRKLLVGDKMAGRHGNKGVVARVMAEEDMPYMEDG
TPLDIVLNPLGVPSRMNLGQIFETQLGFAASKLGISFETPVFDGAEESDV
DNFCKEANLPLNSKFKLYDGRTGLPFMNEVFCGYIYILKLAHLVEDKIHA
RSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASHTLQELLTIKS
DDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIITDSEGN
TVDISDYEDEYSKSKKKIKFETIENA
>LBL_0744 rpoC, DNA-directed RNA polymerase, beta subunit
MRSHNDFESITIRLASPERIKEWSYGEVKKPETINYRTLKPEKDGLFCEK
IFGTTKDWECYCGKFKSIRYKGVICDKCGVEVTHSKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLDMTVNQLKSVLYFEKYVIIDPADSGRSRGELI
DEEEYHGYLDEYGDKFVAGIGADAIKELLARIDVDAEARMIRQKIQDKDK
ISDKRILKRLEVLEAFRDSGNRPEWMVLDIVPVIPPELRPMVQLEGGRFA
TSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVDALFDNSR
RKRAVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KYHEMGLPKKMALELFKPFIMKRLVDLDLAPNIKSAKKKVEAEDKEVFDV
LEYVVKEHPVMLNRAPTLHRLGIQAFLPVLVEGKAIKLHPLVCHAFNADF
DGDQMAIHVPLTPKAQLETWMLMLSPHNILNPANGHPICGPTQDIVLGIY
YLTSELPSEPGAPLKSFSNLDEVHYAIDRGVVEFRTKISVYHQGKILETT
PGRLIFNTILPEGYAYVNRPLSDKETNRIIADVYDKYGPAKTVLMLDDIK
KLGYRYATLFVPTISIEDIRVSPGKVGLVGDANKEVEKADSEYRKGIITN
EERRKKVIEIWTKTNDLITESMFKELEKDKGGFNPVFIMAASGARGSKQQ
IRQLAGMRGLMAKPSGEIIELAIRSNFREGLSVLEFFISTHGARKGLADT
ALKTADAGYLTRRLVDISQDVIISEDDCGTEESISLGIVKEGENVIVSLN
DRVFGRYTAEDVIDPVTDKVVYPRNTLITREVGQKVENLGYDKIRVRSPL
TCESKQGVCIRCYGMDMARLIPAEIGEAVGTIAAQSIGQPGTQLTMRTFH
IGGAASAKVQEKEHKVSYTGIVNNINGRLITNEKSQSVFSRRGSIVIQRL
IQQYKTEELSNLRVENGQKVDKGELVATSPSGENITSAMPGAVHIENGIF
RILGEEAVIPVKTGTVVNVKVNDITQPNQPLAEFDPYNEVGISEIDGTVQ
WMDLEIGKNVRRDEDLRTSNILLKVIEQRREKLNPRIAVISGGSREEYSV
PVDAIISVQDGDKVKAGDILFKIPTVAEKTRDITGGLPRVDELFEARRPK
DATTLAETDGKIEISGEIVKEKRVLYIHPDNPDQEKVKVTIPIGKQIRVR
NGDFVKRGDQIDDGNLDPHDILRVKGVTALQVYLVQEVQEVYRLQGVHIN
DKHIEVVVRQMLRKVLITDSGDTSFVNQQQIDRLMFNEENKRVIAEGGSP
AESVPILLGLTKASLNTESFFSAASFQETTKVLTDAAIKGKTDNLMGLKE
NVIIGHMIPAGTGTKKYKDISVFKSAYGDLDRPLEEEEEEEIPQSIADDS
DGDE
>LBL_1601 rpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
MENLQSMPEVQKIISLGKANGEVSYDDINEILPDKILNSEKIDDFFTLLH
EMGIEIVEEYTRNTLEPASTLVPKDDSKPARKKKESSASASGSEDPIKLY
LREIGKVSLISGETEVFLAKRIEKGEKIIEETILSSSILRANYIKLLPKI
RSKKIKVYDLIRVDKMYALNAEEAHKLEELFFKNILVIQEQEKVLQEAVS
KIRKYSETSKKFKEFKEKIDASTEIIHNAIQELGVSQKEIQKISQKIKSM
VFRIKEIDRHFLKIKAQYGQDVRDIKAFNRFIEKNEKLDDIEVKMGVNID
EVREVIKDIRNNERKLRRMEQEAGSTVQEIKDWGEKIIKGEREISQAKKE
LVKANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFS
TYATWWIRQAITRAISDQARTIRVPVHMIEQVNKVIRETRLFIQEFGRDP
NNEEIAERLGWPVQKVKMVKNVAREPISLEIPVGSEEDSELGDFIPDTEV
ETPVNTAASSILAEQIRQVLHTLPAREQKVIRMRFGLDDGYPQTLEEVGY
QFKVTRERIRQIEAKALRRLRHPSRSKKLKDYIDG
>LBL_2561 rpoE-1, RNA polymerase sigma subunit
MSQNSESQIFDFDGLYSRNYEKIYRFLLSKGASKEEAEETCQETFIKVLN
NWDKFDPSKGNETSWMFTIAKNQFLDLVRKKGTSEKREVENSHKVLEFIS
KKEIEYEEDKHQLDLLNASLENLPHLEKNIIILRFLRNYTIKETAEKLGI
SARTVNRKTYVSLIFLRKKLQNSNFDFESI
>LBL_2910 rpoE-2, RNA polymerase sigma subunit
MDQKEFTELINSTKHIVLSAIKKNLFDEFYDSIDDVVQETYFRAYKSLSA
NKFRGDSSVSTWLYTIARNESLRMNQKRSRQTALANKLKEKVTLDNSIQE
KEAVSIGFTDFELKDLLAVLPWKYKSVLSLVGEGYKEQQIAEKLSIPEGT
VKSRAFRGKQILKKFFVDK
>LBL_1670 rpoN, DNA-directed RNA polymerase sigma-54 subunit
MNLSQSLVQKQTQKLVMTQDLRQSIELLPLSTLELSDRINSELVENPMLE
EEYVSERNKTPDLYSRDDLRRKEKNDFLKNSDVTWQDHFSLDKAGSFGSD
ASDRNQKYIESSPERSSLSEHLLWQLRLSSLKPEEISIGEMLISMLDDHG
FITIPISNLCKEMKLNEKKVRKILDQIQRLDPIGIGTKNVQETLLIQAQI
VKPEDQKLHTLIRDHIKDLEKLDYKSISKKMEISLETVESLASEIKKLEP
YPATLYTPNKPDYVIPDVIVREVEGEFDIYINDEWIPRLKINKEYKNILK
NAKESDKEYITSKLGSAEWLIRSVNQRRQTLFKVTSAIIEMQTEFFQKGI
QYIKPLTLKDIAEKLEMHESTISRITSNKYVQTSRGIMELKWFFSSGVRS
SEGGIESSKKIHDLIRNLVKEEQSDRPLSDQEIVEAIGKQGIEIARRTVA
KYRKILKILPSSQRKKVKSLESR
>LBL_2832 rsbU-1, Serine phosphatase RsbU, regulator of sigma subunit
MQFSKIFFFLVGPFALIILVMISSPWRTGDGLKAYQGKIDLRGIPNPAGM
TKLNGEWEFNWLKESDENHSKGFIEVPGSWTNEFKNYRAYPKFGYATYGL
KVFLPEVWKKRILSISLGAIASAYQVKINGQIIGECGVPGIDADSTISRV
EPKEFLFFADQNEIQIEIFAANYSSTIPGVLLPISIGPSDSAGVSKAITL
FFDIFSFSSLLIMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRSSLINSK
ILMLFFPQIPWPWINKLNHLTLSMGVPFFLLFFSSLFAPYVNRKLVNAGV
VFSILFSVVTLFGNMQFNNQNISIYHYFILITICYLFYAILKIDFDKERN
YAYILYGSGILFIAVLVDLFYVRILKTGSIQTSHYALVLFVFLQSLFLAS
ERSRKFAETRELALNLRTSNLELFEMKEQLVQKIEDRTRVLNDNIVQINR
ELEIAQNVQRKILTPLDRNISGIRFYYEYMPLEKVGGDFLDISEILPGKV
RVLIADAVGHGVQASLMTMALKTEYEELKNLENPAQILKELNSRFLKKFD
SLESIFPCMIGDIDTKKEEFTYASAGHPDQILQAPGEFPSLLQKTGPILG
LFESLEIVSKTVLFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKAL
HEGKKSELNVLIQELIKIEELTRGENPRYDDITLIVVESYTVERS
>LBL_2436 rsbU-2, Serine phosphatase RsbU, regulator of sigma subunit
MNPYILIPFSTLIINGFLFSYVSALKGKSETVTLYQRYSFLLFLWHVSII
LYWSFLPNNWPTIVFKASSFCWIFIGLLFFEFVVRFTNSSYRFTIYFFRG
FCLVSFLLTISTDLVITGTIRSYWGDMILAGPLYLPISNFVSVIPTLIGC
FILIRNGFRSSNPLLKQQSKLVAYGTILTFLFSFTTTLLPRYWSASLTFP
PLSGSATLIQSVCIFIAIHKYGFMDLKLERIALRLYSEIREGLILLSSKG
TLLFSNLSARRMLHLPDSLNLGSNFDLRDYLENFPSDSFFKRKEFVNLSV
KTESSSLNSPEEFLQIIENKYLEVSSSPISLSGKNRDKIYILRDITEKKN
ALEKIRELLYRLDLDLDFARDIQQMITTRDFPASPDYKIHSHFQPYVKVG
GDILNVIKEKDESLHILFGDVSGHGISAAMVAAMISIAFNAATGRSGSTD
KNLLFIHELLKDTITLHSLSSVYMRYVSSERKLEYSYGGHHAGLLIRNGI
CNPIEGSGEILFATLSPKIQRYELDLIKGDRVLFYSDGLFEVKNREGNIL
GKDHFLKAVGSLIVEDTNSMIRSILSYSDSYGEGEVSDDITIFCLEIL
>LBL_2435 rsbU-3, Serine phosphatase RsbU, regulator of sigma subunit
MNYYLFFPMAAFVANTMFIAFVYARRTNNPIIRSYLLYTISLDAWLFTYA
FGWSFPPKPWMTWAFKILSITWLPLGTLYLEFVFTFLNRKPGIFLWLFRI
GIPISYLIILSTDWVIQGSIHYYWGNEGEPGPLYFFVIFNFVALPALIGL
GVLTQSFFASGKDQRKQTGLAILGSMFAIFLSFYSEIIQVDDQGRMLSMP
LTSIGIVIQSFLIFTAITRYGFLRINVEGLAADLFRDIHDGMILVRRDQS
LFFMNESAIRILGISNSPPSHFYPSDFLKGYRESPDHFSKEYEPIFNVDC
RGVELTRSHIELTGKESGYLYILRDISEKIESREKIERFYSDFNKDLEIA
KIAQTSAISTIFPESSKYKFYSHFQPFELVGGDFLRALERSDGKLDILFA
DVSGHGISSAMVAGMLSISFQLVIETNPTPKKALEKTQTLLLNAVLNHHV
SAIYLSFDPDTKTLEYSYAGHHPILIFREGEIIPLRGVGRILLITPDTEL
NNYTFQLKKGDILFLYSDCLFEVRSPEGEILGYENFMLKMNEISVYTPVN
ILKTCIGQALAFGNGKLTDDLTILILEIF
>LBL_1463 rsbU-4, Serine phosphatase RsbU, regulator of sigma subunit
MISSKKQDSLLRQDSDGNLYLEDNPGLTVVFKSLLTELIRLTSAQFGIFG
FRLEDGTLKPICENLPSNMVEEARLVSEFCFRTGQDFNLKKGDSPSKLIP
SLEQNSICCVLHVGELGASSSEDQKKIFGTILIGRSEGGEFREPDLVHLK
TTARTISDLLEESFISGESSLVVLSLMTTSRVALESVQMRKQTDRFDFLL
TEIIRVSGLINKSLDLSQLLEAIMLSSKSVFRTEACSVLLLDDTKEYLYF
HTVLGEKRDEVTRIRVPVGKGVAGMVVRDKKPMIINDATNDPRVYREVDK
ASHFVTRNIMAAPLLVEGQVIGVIEAINTIDRTSFTEEDLELFSSFSGTS
ALAIQKTELLQNLEDANKDLRKKVSELESLFELSQVVSSAKSQADLMKYS
IPVIHNEMDAGKTGIFLINRKMGILTLIVCTSERAVEIFRTTNYHNSFIH
RSIEQETTTVKEDIQDFAFDHELDLEYLKGSYIVLPLTQQGRNAFGVITV
SDRVDKLSYNHSHLRLLQTFASLIARGHETLKLQNEMISRKATQRSLQRE
IEITREIQKNILPELKSFHSNFDIGVKSVPAKDVSGDFYDYYQYQDGQYS
FLVSDVSGKSLPAAIFMAMSSSVIRTLARNHDLDPEEILKQGNALIYEDS
HNGMFVTTFFIHYNPAIFTLDYASAGHNEQVLIRKDNSWEFLKASGPPLG
VIPSANYKGGSLIVEPGDMVILYTDGAIEEKNAKDEEFGLERMIREIIAR
KHLPAGQIVEELFGLVRKFSGASELFDDFTVMILKFNDNYQFSRTFEANI
SSIPLFREFVYETIKVRNLEESQRDDILLACDEAGTNIVMHSYENTSLKN
PEFECKIRFTGDWITIVLIDSGKTFQRKEVQKPSIEDNLSGKRKGGFGVY
LIEKLMDLVDYSSESGKNVLILKKNFQNKASNGNNF
>LBL_2240 spoT, GTP pyrophosphokinase
MGFVKTPATKDMLLEGVRETLGESAYESVQKAYDVSERAHQGQFRLSGEP
YIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSRDDMIRDFGEDIT
DLVEGVTKISKIKSQSKETEAAENIRKIIVATIKDIRVILIKLADKTHNM
RTLSFQLPEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEE
YQEVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVDGRAKHFYSIY
RKMKLKEKTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDY
IATPKTNMYQSLHTTVIGPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEG
KPSLSEKNVKVRWLELLSSWQDSALDPKEFVEELKYDLHEDEVFVFTPKG
EILQLPKGATILDFAFRIHTDVGLKAKGGRINGRMLPLRTELRSGDQIEI
ITDKRTKPSPIWLRIVRTPSARQKLRSYFRKLKEENKKDLQQEAEFAAEI
TLNVEVLEELKKKPLAKPAKQIDLGAGKVIVAGLRGILARLSGCCSPLPG
DGIIGFVTRGRGVSIHKKGCATAKQQEQEESMRIITVEWDYGQSESIPVL
IEVKSKDRQGIFMEIVKSISNTQTNIRESKASTDQRGNLVANFEVDVEHL
DQLKEILSNLKQIPDVYQAHRIKN
>LBL_2858 srmB, ATP-dependent RNA helicase (superfamily II)
MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQT
GTGKTAAFAIPAIELLEVESKHLQALILCPTRELVIQVSEQFRKLMKYKG
NFEVVPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGSIRLNDIKI
VVLDEADEMLDMGFREDMEFILKDTPIDRQTIMFSATMTEDILTLMKRFQ
KHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARLIEYRNVKLALVFC
NTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRNGNIEILVAT
DVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGK
QIYNLKKIERINGIKIEAGKIPTLDDLEETKIHSYTSKVRSIVDAGHIGK
YVNQVEKLMGDDYTALDIAAALFKMTILRDSVTFDDSVQFESNFKYEERN
SFKKKPGKYRDRNFGRSGSGARTKSNPGSHSGNSSGNGSHSKFSKGDKNQ
KSGGLSSFKKKKK
>LBL_0073 vacB, Exoribonuclease R
MNIKKKQTKQNKTAKPDTKKKIFGRSDKNKKNRFARRSEGFPESEIGRKI
LRYLRSRAGSVIQFKDLTAKILKEENQNSYGKKREKWQFEEREREITEIL
QILEAEGLIELEKKNILVNSNQKLLGTISTSKKGDGFVKLPSGMEVFVPG
QYVQSAIQGDLVEVQPNAIGKKGRLEGEVTKILRRGRDLYRMIVIEKDPK
FIFGKLLDIDGEEKEGYLLRKTILMDLQDEIQLGDVLIVKLREETEHERN
LYEVQFLRFESDTKEDLDLMRMLMKYNYSILYPENIVLNLPEEVDESTVD
DWGSRVDLRNLKCITIDGEYSKDFDDAISFVEEKSRIRFYVHVADVSYYV
RLGTDLDEEAYNRATSVYLGSRVVPMLPPDLSENLCSLVAGKNRLAFTVE
MEADWKGKITHVKYYKSVINVAERYTYNRAESEILSGDPGNWIFRMNEFA
KALRARRIEDGRVDLNLKENKVVTDSEHNVVEISVQDRLQAHILIEEFML
SANIKIAESIRKKKHPTLYRIHEPMNEEKLESLNAFLQLNGIKILLKDSS
YEAIRAVLKELEGKPAERLFNMFLLRTFMQAYYSGEYLGHWGLGFEDYCH
FTSPIRRYPDLVCHRVLQQILLGKKPLYGPEEVVTLGLHCSHQERKASDA
ERDYYKLKACRYLEKTGIKEFSATITGCKPHLIFVDLENPSVDACLISSE
FTDEGEIRLETDFSFYSKKYSKIYTLGDKIEVELDRVDYEEIKIFVKMKK
FQKKV


# Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

>LIC12807 response regulator
MVLQKISTTTKSNYSVSIVEDNPHTALNLQELLSKSNEFKFLEHYPNSHK
AIEKIPLNIPDIVILDIGLPEKSGLECLKELKEKTPNTKYVIFTVFEDEE
KIVEAIQEGASGYLLKDTSPELFLAELKVIVLGGAPLTPRIADKIIRKFT
KKEESKNQPIQNTLGLTKRKLQILNFIALGMTVSDIADELDISSHTVSRH
IEKIYKKMEVHSKSEAIIRGRRMGIIQDIPGYP
>LIC11617 transcriptional regulator (ArsR family)
MSKEKSALKKNQLESAIRGIKGIAHPDRLQILFFLSQKEHSVGELVDLLG
ISQSAASQHLSKMKINGILSSRKESNQVFYYLKDGKYKDLIRTIVKIYG
>LIC20275 ParB
MSSKSKRLGSLADVFQAEKLEGTVRKIRLDKILPSENQPRQDRKKGVDDL
ARSLEKDGLLQPIIVTKQNPEDENYRIVAGERRYHAAKQLDWTEVECKIL
DRDEKETFRLAIIENLQRENLSPYEEIEAMSHLKTSFKYTDQELGTLFGK
SRSYMTELLGISSLSKEELRSCKEAGIEGKNLLIQAVAASRKGTFFEFLN
LFQTGALKTVKDAKSFNREEENLFTPKIATNTNSKTSNSKLTEYKITKKQ
GLIQITSHDEALLGEILKLIKKEIRKKFGDT
>LIC10559 RNA polymerase ECF-type sigma factor
MMTESEFAEIVNSTRNTVLSAIEKNLAERFYYAIDDVAQETYFRAYKALK
KNQFRQESKLSTWLYTIARNESLRMNDKLRKEEARAEKLINSKKEEDFLE
VKSNLNENSERNSQEVIGLLRSLLIKIPNKYRKVLEFYLAGYSEKQISET
MGVKPGTVKSRAARGKEMMKRVGAKEKFYEE
>LIC11380 RNA polymerase sigma-28 factor
MSKKYEKYNQQDETELWKSYRETKDQDIRSYLVEKYSPLVKHVAGRIAIG
MPQNVEFDDLVSYGVFGLLDAIEKFDPERLIKFKTYAMTRIRGSIFDELR
SIDWIPRSIRQKAKQLEQIIGMLENKEGQQVDDDAIAKELGISMEEYNSL
LTKISGTSLVSLNDIWFLGDENDEVSFMETLESPMNMNPDTIIEKEEIKN
VIVEAIKTLPEKEKKVIVLYYYEDLTLKEIGEVLEVTESRISQLHTRAVS
RLRSKLGKVKSVISRK
>LIC10375 transcriptional regulator (TetR family)
MIRKKTTKQKETGKSQQTRSLLFKTAILSFQKEGYDETTMRTIAKKAGLA
VGASYYHFKTKEEIVLEFYRTTQEEANIQNIEFCKSNLDLKDRIKNIIRF
KLGQFIGYEKFLHVLSRSGGDPKHPLSPFSKETKQIREDAISIFRNAILD
SKNPFPSDLKEDLPLLFWLFQLGIIYVWLFDESTHKRKTELLIDKGLDLI
FQLLKLSSLPIFKSVRKSILSLVNLFKK
>LIC13039 transcriptional regulator (MarR family)
MGTHYKGNSRETAVLNAFIKLSRCSDSIRQLEEKVFSKYGLTTGQFGCLE
TLLHLGPMCQKEIGQKLFSCEGNITQIVDNLEKRKLVQRVRSEEDRRYII
IHLTSEGKKLIQKAFPDLLNSLVHKFGNLSENQLLDLGDFCKEIGLKTI
>LIC13408 transcriptional regulator (ArsR family)
MLYFLYMNAFAALADDTRREIVRLVAKNGKLTSTEISQNFKMTPPAISQH
LKVLKEAKVLHMKKEAQRRIYSLNNSGIDEMEDWLLDIKNLWNKRLDNLD
KYLLKIKKEKSHDKKLR
>LIC13273 sigma factor regulatory protein
MRNILLLFISLILLSIVLLIGVLQTSSETLKPPFYYYPNGTIIQSSEEFP
GILGKKVDLLELEIAIKMAESGQSYENGIHVYDKGVSETIPVILAPKSYY
SVVKEFTRDILISLLYLSVAIWFFFYTRDLYMLLLFGSLSCLSLFNFFLV
GFHEFHFLFFFFLYFTAFVILNISFRLRGKELPTRWFAPEIIFSLIAGFV
GRTQKADPHIFGILATNGVYFILFSSVICIFFLVTDSIRNLFPIQSLFKK
LSLILAFSAISILPFVSVEFSEFISPDFSKLMILFAFLIFPALIIYGTFT
YSIVPVQIAFSSSLTSIYLILILAGGYLFLLGAFFKFDPIATDKYLEEFN
VLFLCSSIYTMSSINRRLSNLVDTWSFKRNQKLHSAMETISAMISAPISM
RATINNMMRKVSEALDISKILVLIPADKFPRTDLKNINFIRISSNSEIWQ
YFATNTEVTVTTHLAYGLGIRESVYKFLHNSGVQLTYPIFNYSRGKEVLA
VFLVGEKKNRKNFNLGELHFLKECTRMASMLLQNYTLLAEEVEKKRIVRD
LNMASIIDKTLHVAESRHIQGVKIGFFSIPAVGISGDYLDIQKLDSNTML
LALGDVSGHGLGTGYLVSAIRGIIQNQIRKKSDLSKIFKVINSFLIERYR
GSEFMTFICGEYNSQKETFHYINAGHSSPICIRKDGKIELRSETQRVLGV
LHTEYKHLTIPIYSGDKLILFTDGVTETFNDNEEIFGDENFLNLLKNNHH
LDPQDLSDLVLKTIQEFRGKKDPSDDISFICIEVNKNYDSNQ
>LIC12792 conserved hypothetical protein
MLLVVDVGNTNTVFGIFENGNKIPLFHKRTVTRKDRTSDELGLFFRGFLR
EFKIENEMITGGIYSSVVPTLNPILDRMFQDWFKIEAIRVHYQMKLPFSI
SYPRPYEIGADRLVNAATCAIDFPGKSIIIDLGTATTFCVVNEKPEYLGG
VIAPGLKVSMDALTRNTSQLPPIVFQSPGKILGDSTIESIQAGFFFGWIG
LLEGIIREIKKDKGQDYQVIGTGGLVTVIDAAHPGIFDKIDPLLTLRGLQ
ILHLMNS
>LIC12757 RNA polymerase ECF-type sigma factor
MSQNSESQIFDFDGLYSRNYEKIYRFLLSKGASKEEAEEICQETFIKVLR
HWEKFDPSKGNETSWMLTIAKNQFLDMIKKKDTVEKRELGDSQKVLEIIS
KKETEYEEDRYQLDLLNASVESLPQLEKNIIVLRFLRKYTIKETADKLGI
SVRTVNRKTFATLTVLRKKLEALNFDFESI
>LIC11110 histidine kinase response regulator hybrid protein
MTPMRILFLDDEEMIRDLFREIFGTIHDLTLIGSAEEALEVCKDKSFDLI
ITDVRLPKMSGIDFISRLRDKEINTPFIVITGNQDIEISIRALRLGAVDF
FIKPFRMDAIRHSLQKFESLFISSQELISKNHFQLTHSKQNFAIKPSLKN
LNQYVNLVMRSISLTPGIHTDDILSIKLALYELLGNAIEHGFAGISYEHK
ASLLSSDVDYVDHVDKICADINECVLLEIGFEDQKVYVSLKDRGAGFDPS
KVPDPVTDPNASYLSGRGIFLARMNVDELVYNDIGNEVSFSKTLKRANSK
VNAS
>LIC13047 conserved hypothetical protein
MFKSLHSREAKIFCKNLIAARKNSKLTQLEVAKRLGEPQSYISKIESGER
RLDVIEFWRIFKILGKSIEFYFQFDEKQDGSEKKSKTLKVASNKRKKK
>LIC13088 response regulator
MKPTDTKIFLVDDHAILREGLKMILSGQPGFEICGESGDAEKALDQIGKL
NPDLVITDISMPGLSGIDLVKNLRKYYPNIRTIILSRHDNKEYVQKLLEL
GINGYVLKDDAGNDLLRAIEAVHKGETYLSPGITTHFLSGFVGSGKPGED
NQDAKKAFSVLSDREREILKLVAEGNSNESIGKILRISPATVKVHRANIM
KKLDLHKVADLVMYAIRAGLIES
>LIC11191 transcriptional regulator
MFKSLHSREAKIFCKNLIAARKDAHLTQLEVANRLGEPQSYISKIESGER
RLDVVEFWRIFKILGKSLEFYFQFDDKHDGFEKKSKTIKAASSRRKKK
>LIC10395 transcriptional regulator (TetR family)
MTVTRHKRRSRNSLNRENIVQVAMEILQEKGIDRLSMRKIAEKLNCSVAS
PYSHFTSQEEIIQVLIAKGETELTQLLRNAQKNGKNAFEQLAGIARAYWD
FSLNNKELHKVMFNTVHGHMHRKAFPSLPTSYRVFLETIRNGCINQEFKL
PKSEYPAIARMMWAWMYGLMVLDLTNMLKRRRGGKDDPLAEGFLYFQKIL
LEE
>LIC12582 transcriptional regulator (ArsR family)
MLYYNNMLKLDKQDSVFKALSDPKRREILDLLSIKPKTTGEICSHFKSLD
RCTVMQHLKVLEHAGLLIVKKVGRIRWNYLDHVPIQEIYDRWISKYAQPS
LEKLTRWKNELESIID
>LIC13441 transcriptional regulator (MarR family)
MGKTAKDLFLENQVCFPLYACSRALTAIYRPILEELGITYPQYLVLLILW
KEDGCSVKEIGKKLYLDSGTLTPLLKRLEDSEFVIRKRSIEDERSVEIYL
SAKGKKLRDKAVCVPSKLIESLEIDKKSLIDLKKDLDRLLLTLSEKVE
>LIC11896 response regulator
MGQKSSFPKNEIDFLFSWMRTILLTEDEPGIRDTIQIVLESEGFKMIYAM
TGKECISLLKESPDLLVLDVGLPDGSGFEILKELRKKNSIPVILLTARES
ELDRVLGLELGADDYMVKPFSPRELVARIKAVLRRYDGNSEKKQTEFLTD
EDRKIIYYYGKSLSLTPYEYKTLLLFLKRPGKIFTREEIMDRVWTEPEES
FDRAVDTVIKNIRFRLKEIRPDLDPIETKRGQGYGLKDTL
>LIC11146 putative transcriptional regulator (DeoR family)
MRADRLLSILLQLQAKGRISSRDLAKKLEVSERTIHRDMEALSASGIPVY
AERGSKGGWELSEGYRTNLTGMKKEEIFSMILTSSTRIASDLGRKKDLDS
ALMKFMASLPPAYQKEAEMVRQRIYVDGAGWSCSEEELPFLSLIQEAVWQ
GKKIVLRYKTDEESKKRNVSPLGLVAKGKIWYLVAKYEKEFRTFRVSRIV
EAKLGDSFERPKRFDLEKYWKDSTQNFLSKIPSYPVRFKIHVSKIDFLKN
ILYIRILKYSKINKDWIEVIADLETREWALHHILGLGDSVVLWEPEELRE
SILISVRKILDSYSKNL
>LIC20115 RNA polymerase ECF-type sigma factor
MATRKDFMDALYREYSGKIFDFLYKYSSGNPEIAMDLMQDTFLNFFRKYS
DTDIDQEQAIRLLYTIARNRSINYSRKFSTVKESGNSEMQEFQEQKLSFV
RKAELKDLEERLLVCLDELEEDEKYALILRFMEDYNLTTIAEIMNISVST
ASRLIVKATAKVTEIAEKKNLKP
>LIC13214 putative cytochrome oxidase subunit
MELFLNYALYVIVSIGFLIPFTGFVIGAGTIIKATLVGFAVNFSSQVLEE
NKLQDFIERNKDNKLGKFLQEVVLKGQEKLKSSPTKEAHKEESHGSHHVI
SVKTYSLIFATLIFFTFVTVWVAGIDFGAMNVIIAMAVATAKASLVLGYF
MHLKYDTLMNRVIFGSGFFFLLLLFGFSAADIFTRFKVLLSFAF
>LIC11584 transcriptional regulator (TetR family)
MQKIAHTKQEMITAARKLIQAKGVASTGLMEIVAAAETSRGSIYHHFPGG
KDELICLAIEEAAILAELGILRAGKKGKNAAEVIQKIASLFRQVPENSKW
QVGCPVAATAIEGHSQSKIVRDAVANAFSRWSKAIEFTLSEAGLKPEDAK
SIGIGIVAALEGGLLLARGLSSSKPYDTIIDLIIAGVATKDKNPPKNKQS
>LIC20029 conserved hypothetical protein
MAAIAFLCVSLFLSFYFLKNTEYIPKDAIAVSNHFLRLLITKKLKEAYSL
TNENAIVGTSYERFQKKVDQELGNGDGMGNCDLSIKSYGPKQTYGNRLKR
YWNQDTVEVDPLYVEYYPCGLPFQIVLHLNRNGEWKIVNFQSHAD
>LIC13150 ATP-dependent DNA helicase protein
MKNSVSKTETQSNGLLLPVTVIKGVGPSKAAALASIGIDTLQDLLNFFPR
RYLDRNLTDNVLLKTGETVTLIVEVIDAYLAHGKKSRLVVGTKTRNNERI
SIVFFRGVNFFQKIFQPGTTLVATGKLEYFRGFQLIHPDYEILTSAIKTT
YPISSTGSKKKKQEQEPEEELSELPEMIHAGRIIPLYPSGEVLKSEGLDS
RGFRKILYSALEKLKGKIPEILPNEIVKRRGLILREESYREIHFPTDENS
LDTAKYRLKYEELFYFNLLIEHKKKEREKIKRVLWPLPESETANKVRKNL
PFQLTEDQNSALQKIKELTNKEQPIAVLLQGDVGSGKTLVALLTALRYID
NQIQVCMVAPTEILARQHYQTILSFLGNMPFLGIELLVGKEPKKNRYEKL
YRIKKGDTLFVIGTHSVFQEDVYFSELGLVIIDEQHKFGVDQRETLRSKG
KNPDILAMTATPIPRTLCLTLYGDLDLLTIKSKPKGRMPIQTKWFQEDRR
EGIYKSIRKYVSSGRQCYIVYPLVEESEKVDLKSCIEAYEYLKHEIFPDF
EVGLVHGKMEVEEKDRVMREFSKNRIQILVSTTVIEVGIDVPNSTVMVIE
HADRFGISQLHQLRGRVGRGDQESFCILMTDSKVTEDAKVRLEAMVNFSD
GFALSEIDLQLRGPGELMGVRQSGLPDFKIADLRKDSNLIELTREDATLF
GNPGDLEKEEIRGRFSEGRLLFSN
>LIC12431 transcriptional regulator (TetR family)
MDSPNQEMHESIELDSKWPEGQKKIFLAAIEIFAQKGFSAATTIEISKKA
GVAEGLIFKHFKSKKELLLRLVSPILEKFFAPLTLRRLQTMVFSQKFTSL
EQFLTAIFEERIGFVRSNKNLMRIILQEAFVTLEVRSLLERVFRQRVVPL
VQEHLKKFQDAGMISKEISISSAFRLVAVNLAGFVLLTEIFYPPKPEDGW
DQETELKRTIEFIARGLAPKIQEVPAPVLKPKKKPTVRKTATKVKKKKKR
S
>LIC12654 transcriptional repressor (LexA family)
MNRQRSRRNELHPTQKKLLELLKRWKDEPRTIRELMEALDLKYPNLVYHH
IEQLENKGYLKRNPNNPKDYEIVSDPEESNIVYLNRYGEAQCGPNGTILD
GDPVERIPLSRKMLPFSSSDGFIVKARGNSMIPRIKDGDLVIAKKASDAN
DKALIVCVQNGKVLIKQLRKSETGILLLSLNDEFDPITINPDKDDFKIEG
EVKLILSYT
>LIC12490 RNA polymerase ECF-type sigma factor
MDSSTKKEQKQIVPKKPTLREIEIGLLKKIKEGDDEAYIQLVSLFRERLY
RKAISMVKDGDDAEDIVQDALISGYRSIRNFRADSGVYTWLYRIVVNKSK
DMLAKRKRAKENSMDDKEYQVTDDRLGFEKKIELSDESNYLISKINGLED
LYKEVIELRYFEEMSYAQIAEVLGTNVGTVKSRLFKAKEFLKHLILQDGK
GEGYFR
>LIC12738 transcriptional regulator (MarR family)
MSPRMVIYLISRIRDEFHKHLNQELKEKNLSPLTTSHADILFALVKKNKA
QMQDIAKMINRDKSTLTALVDKLEVLGLVARTKDSEDQRIIHLELTPKAD
SVRPVLLGISRSLLGNLYRGFTENEKKELVRLLMKLYQNQNPESVTVDLL
Q
>LIC12496 sigma factor regulatory protein
MTWIKRFSRFKSDFLNPFTFFEREFNYSEAQSWKDQTRIDQSFIRLAFLL
HFMMYSTLAIPEVRSSQRGGVYLGIIFLVNVMGLVLSFQERFLSWVIHIS
NVIIIFLLMNLFHESFYHFRDLESLQIYNNYFLLISFIVIFQMFRLKKGS
CFLTGTVSICLHIFFVSIKRMELGLDDFPRILFVPDVVYVLCIVIGTSSV
IIVKRLISISSELDLEYKFIQQDLIVAKQVQENLFPGKLSIKGIRYEVMR
IAPNHIGGDFFDFVQLREGNTGIFLTDVAGHGIASALVASMVKIMVSTMP
YILKVHPSRLMDYIDDSLHKQFQSYHASAIYMFLDFISREVTFSNAGHPY
LIHGSFSKEFHEVETEGAILGFGIKKPIAEQVKFPLVEKDRFFLYTDGLI
ENKNREGKLLGTEGLLEILNANRFEKDLSTFKANVQKTVEDFFGNVALED
DTLFLIVEVE
>LIC20013 response regulator
MRAKLLLVEDDRSLGETLQERLEKEGYEVLWTVSAVSAKKLVKDERPHLI
LLDVRLPDGDGFALAEELKESKDCPPFLFLTAQAGAPERLRGFELGAEEF
IPKPFHLKELLLRVKHVLESHKHSVEETRFIYKDFMLDFQGFQIKRGGEE
FPLSKRDCALLHFLVSERNRTVSRAEILDKLWGEESFPTNRTIDNSIVRL
RQAFSEEGEKVIRSVRGVGYQWTGEIKNAE
>LIC10557 response regulator
MKVAPTYSILLAEDDESNAELLIRHLERYNFDVDHVVDGVAAEIKLRKIR
YDLILTDNRMPKLSGLDFLERIPDMNRMTPIIFLTVSNEKETIIQAAHNK
KLVAYLLKPIDTHVLIEKICQALGIKTNSLIDKKEYPFEILPFTHTDKGV
GVGIELKGCPYGKSIEKLVQEIAFFLKELPSLRSILIKVNPEFFYFKSGT
QLLSSLKDRLAIKYEISKEDITIQTEH
>LIC12206 transcriptional regulator (MarR family)
MDDALRHKLLRILEENPEVNQREISEILGISLGKVNYCLKALMDKGWIKA
RNFKNSKHKLAYAYFLTPSGIEEKARITVRYLKLKMQEYEEIQKEIEELK
KEIGEQ
>LIC12798 transcriptional regulator (TetR family)
MKTQPRKKKESGTGVRERILDTATSLFYKQGFSSTGMRQIIQESNSVAAS
LYDHYPSKKELGLAYLARQEEKTLSDLQSLMDRYPDLGEFLRAWVILKEK
QIRHGEFVGCPFAGFASQVMDSDPEYTEFLKDIVNKWIRMISDYLQKAIG
SGQLKRNMDIQYVARRILMAYHGSITMWRMTQELRFIREMDDSLREIVEE
YRIL
>LIC10378 transcriptional regulator (PadR family)
MMTKEESIETKGITPAMFHILLSLAEGPQHGYGIGKSVEISSEGNFHLGP
GTLYRTLELIRGFGWVRYSKKKVMENDDPRRLYYEITSDGKEILVYELKK
METTLKRAKKLKLLGN
>LIC13024 conserved hypothetical protein
MQKEFTFYKNYREKEKLREAFFQFTPKALYGADFRLWYQLGFWENSYIPY
SFFKDEIIVSNASVCEMKIILNGQEFDAVQLATVGTLPEYQHQGLSRKLI
EHILEDYKSKTSFFFYLETKTY
>LIC11317 conserved hypothetical protein
MFFGLENCFFILIKESQKIKLKKIQYSFLRFVKMKDNKLWLLKSFSIVSF
FAKMFSNFYRMFFGVLSKHFLFYFLIIFSVSSESIQKIQSLDEIVSLDST
KEHGWEITLQKIDPVAFSDSYLKGQKNSNIQLEAYEAPGVYILPEESIQT
AFIVKKFIAPKNWKGSGLAVRLGTLTDKDKTYLNGTLIGETGDMNSTLPQ
AYDKIRIYQIPNGLIRKDEVNILIIEVKKYFQKEIGIEQDKTAIGDSLLI
QKELLETEYIKILLLMIYTTAGVYFLFLYLRRRADRENLYYGLFTILLVL
YQFLRNQIKYDLGIEFIYMKKLEYMVLATLVPLFANFIRLYFKYPKTTIL
KVLDGLYVSFAIFYFFSNNVEHYNFINKNLVQYGWILYLGITLNHLIRRV
IAKDRDAFLILIGVLITVFAAILDTLGARNVFVFPRLVGYSFLFFILSIA
TILANKFVRLNEEVEELNLGLEKKVEQRTEELRLSLEQVNRLKVQQDADY
FLTSLLINPLSSNKNTSEVIKTEFYTKQKKSFEFKNRTYEIGGDILISGN
VKLCGKKYVVFVNGDAMGKSIQGAGGALVLGTVFNTILTRSSISLYQNKQ
PEKWLEEAFLELQKIFESFDGSMYISIVLGLVEENTGLLYYINAEHPWTV
LYRNGVACYIEEELTLRKIGIPENEEHLVIKNFQMLPGDTIVIGSDGRDD
LLVGKEGNRVVNEDQNQFLKRVEEGNADLRKVYEEIIKFGVILDDLSLLK
VTYNPEDSKTKE
>LIC12368 conserved hypothetical protein
MTDWFCRLEWNWDGASLESKESSKKKSGWLLYIAAGILLFSALIFLISKF
NRTGLEEKIAAGKPIYFLFHAVNDSQEYEFGLLATLFPSNNRCALYFIHP
ITSFDDPDDSLDLLKSGAKSSVKSAITDLIDTKPNYTISISSSQWIRIVD
LLGGLDVYTDNKTVRSSSEYNREPGVYTMSGQDVYDYTSKIDKKETLDYL
ERISRQESVVLTLYEALSQKKEFLTTPLLIFAHSLIESDLSKEDFVSLIK
FVNSRRIQFGISELPGEPMNDPKTKKLYLKTDIARARIAFRKFSKDMNSD
VFTDAEFARTEVLNGTEVAGLAKDVRGILSDKRIKVLAADNAWKKGFPKT
VVIDRSGNTAIMDRISTVLEKAEVHHVLRKDLGLDATVVVGSDYEPRK
>LIC10214 transcriptional regulator (CarD family)
MCYFLKQSFNGSYHTYLAAKKKNSEIEHKVGDYVVYPIHGVGEILEISKK
NILGKKKDCYVLEIQGSKMKVMIPVDKAEQVRIRPIIDKKEIKKVIALLK
KDEVDTEEDWKIRYQNNLNKIKSGSIYEVGEVCRNLFRRASGKELSIMER
KLYESAYNLVKMEVALSKGVTQEEAGNLVSDVLASTLSPSEKKAEEE
>LIC20021 ParB
MAKRSDFAGMDLLTAFGEKESSKLEIQLSDIVPNPSQPRVFGKEEVSDLV
ESMKRLGLIEPIVVRKSGKKYQIVAGERRYQAAKILKWNTIPAIETSASE
DKCFEMALAENEKRKSLNPWEVGRAIQFLRKEKKKTAEEVSKILGFTERY
VKQLSSIARLDQKSVGDLIKSGKDTSVKNLEALLKQKEGRGGEIISSRKL
IQSKIVLQIGKLSLQQREKFLKELSSLKKKYGIKD
>LIC12616 conserved hypothetical protein
MNFEYIESIMNKMISEVVGMGQSIPLILADQAVLPSSCPYGTYKVIQLVQ
DPISNASRSIQKLDPTNFKEIIRINQSVLINITFLHDSSIAVCWELSEKS
MDWFDSKEGTIECDKFGITPVLISPNIQDKTVLTESGIYIYKVSFDVLLK
LRKYNEQPGESTASAPTVEYQEEA
>LIC10275 conserved hypothetical protein
MGSMFFKDSNFTKKNFLKNLFLVREPEIEFLKSSEQTKINISRKISEEEW
ESFFNRLTTARIEANLTQAQVAKSLGKYQSYISKIESGEKKIVYGRFCQI
IQTL
>LIC12046 hypothetical protein
MNSVNFEKTILELRKIAKRNTRDKSKKQFDEELFEGQFFNYIKEKKIDSN
SLYNIASSLMQGKDNFDKDMAIFIISFSDFPQNLISNFLEKNLTSMNEEQ
TSSGMFLINKYQLKDLYYPLVNHLKLNLFFNSESFKERLTYSGILFDKEE
GYKEFQKALEKDLLDENKDYESILKYTGNILSSFLFNKNYEKIQAIFQRY
SDQKTKDFLEQQAFLAVKRWNAGFKEKFMIKKAIIIAQIKNLVKLT
>LIC13427 response regulator
MRNKKSNLILISSNQKIIIVDDNQKYAQQLSSLLLSKKETIQISCAENIR
SGYKKILKGNFEVFFCDITIRKRLVGFYLVHRLRKRNDRIKIILMSTIFD
YRIFFILFYRIIKFSFALNGICRKSDVINGKLVIY
>LIC20104 DNA binding protein
MGFSKTFSREFILMFSANNLYDVISSLFSEMNLFYAHAAGVGTGIVMAIT
KLYTGRKDEFSKAYGTILLSVSIFLMANNRVIFPQQTDPRLLKDSLFLGI
YFGLVLYASAAVLVCMMFILDRLQNPWYYCKRLTAIIPLALTAAFFLPGT
IYICFCDSVAILITLYTSGWSIYKIRSSQKSNVFFNFPFITLAITSSLIL
DLTGTVIQSTKMLMFSELIPGFMIAYTTLIERFFPILFSKAYGESNKVLM
DQELTDFSDDDLLESEEEIQSESTRNILEGVELEKIEERINSFLQVRGYA
DEELRLPDFASYLGLSTHQASYYLNKHMSMKFADFLNMNRIEDVKRNLRN
KSHMNLLQIALECGFNSASSFHRACVKFTGKSPREFRKLINSDN
>LIC13073 transcriptional regulator (TetR family)
MKMKVMDQDEVKHRIMDKALELFLKYGYAKTKMEEIARVLKISRKTLYKH
FENKNHLLFEILSHKHNLMSSTLEKISEDDSLSVHEKIQAINEFKISQFP
TGANEFILEIRDQAPDHYAYIKEVRMESVAKSVQALVKQGIEKGEIRKDL
NPTIFAALLNSAIEMTATPELLLNSPYSMMQLQGEIHGILFYGIMNSSET
QSVEKVSSD
>LIC11676 transcriptional regulator (TetR family)
MQKKIDIQHYFVHYKLSKKISRGNSMPKIVNHEKYKTEILAKCVDILARR
GYSAVSMREIAAELDVSTGTLYHYFATKEDIFKELVKFVLNKDIEELQIH
SKGDLGQTLETRIESLFQMVQAREAYFQNLLYIICDVSRLKNHEEEKSLI
ADTIKEYVHIITKHLGVTNPALNRILISVILGTVVQRILDSEAISLSETS
DVVKDFLSILLSNSFTF
>LIC12016 conserved hypothetical protein
MLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQACVKYLKTTL
EKLFNEEPVEDVYPEFTEGLTNKLWAKRRELGIKQYDMAKKLKVSTPFLS
KVELGLLEPPEDFKNMASKALKMKKEELFLQKVEY
>LIC11653 conserved hypothetical protein
MRIFALLFCLFLISTAELFAQLPDETPTPNRRQPTNTTQQAINLLEGFAE
SSWGESYANLREKFLSLSTNPQNDEKVEIVYEDKEKTLLIRRNGILYSYR
FYSTPKIVTESRPKDQRQPTTENKSEIEEENHSAPGVLFSVGVLFRYLPG
KEVQQKLEQKYGKPKKESLAENKIGGAVLWEKTDEKQSPPRGGYVVQWKE
AYKKMPFTRRVDYFSSSIKFQIEKEYKEFFNAEEIKTLRDLIP
>LIC10144 RNA polymerase ECF-type sigma factor
MVQSDSVDFSVLYEDNYRTVYHFLLKICGDPEVAEDLTQEAFLKAFTFFH
KFDSKIASFSTWTCSIAKNLYFKHYNKQKKEFGNIRLSDLVGDIEIDPEI
PENLEKVFLEKAIKDTIESLPEPEKSIILYKELKKKTLKETAQVLGISER
TVSRRLISAISLLRTKLEQQGFQF
>LIC11012 guanosine polyphosphate pyrophosphohydrolases/synthetases
MGFVKAPVTKDILLEGVCQKLGDHAYESVQKAYDVSERAHQGQFRLSGEP
YIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDIT
DLVEGVTKISKIKSQSKETEAAENIRKIIVATIKDIRVILIKLADKTHNL
RTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDE
YQEVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVDGRAKHFYSIY
RKMKLKEKTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDY
IATPKTNMYQSLHTTVIGPDGKPLEVQIRTRDMNDIAEYGIAAHWIYKEG
KPSASEKNVKVKWLELLSSWQDSALDPKEFVEELKYDLHEDEVFVFTPKG
EILQLPKGATILDFAFRIHTDVGLKAKGGRINGRMLPLRTELRSGDQIEI
ITDKRTKPSPIWLRIVRTPSARQKLRSYFKKLREENKKDLQQEAEFAAEI
TLNVDVLEELKKKPSSKPTKQIDLAAGKVIVAGLRGIPVRLSGCCSPLPG
DGIIGFVTRGRGVSIHKKGCVTAKQQEQEESMRVITVEWDYGQSESIPVL
IEVKSKDRQGIFMEIVKSISNTQTNIRESKASTDQRGNLVASFEVDVEHL
DQLKEILSNLKQIPDVYQAHRIKN
>LIC11154 transcriptional regulator
MNPAMEELEEGKESSSEHITEVVKENLKLIRHTKGFSLDKLASRCGVSRA
MLSQIEQGKSVPTISVLWKIANGLNVPFSELLKEKGTEGVIVMKAENTKV
LFSSSKVFSSRALFPYNGNRKTEFYELILKPGGIEVADSHSSGTTENIVV
VSGKLRLRVGEKVVELEPRDSVFFRADIPHEYSNPTDQETLMYLVMDYRD
EIN
>LIC13285 RNA polymerase ECF-type sigma factor
MEQKEFTELIDSTKHIVLSAIKKNLFEEFHDSIDDVVQETYFRAYKSLSA
NKFRGDSSVSTWLYTIARNESLRMNQKRSRQTALASKLKEKVIFDNNSNQ
EKESISFTDFELKDLLAMLPWKYKSVLSLVGEGYKEQQIAEKLSIPEGTV
KSRVFRGKQMLKKNLIDKQ
>LIC11684 transcriptional regulator (Sir2 family)
MKEFITKHRDKFQKISAISGAGISAESGIPTFRGSEGLWKNFRAEDLATP
QAFSKNPKLVWEWYLWRRNIIETKRPNPGHFALVELERIHPDFFLITQNV
DGLHSQAGSKKLTEIHGNIFINRCISCGQESKETISENTTPLPPQCQNCN
SFLRPGVVWFGESYDDFKLNFSIQRMKHTDLLLVLGTSGSVSMPVYLAQI
AKDSGALLVEINPERSSFSSSVDLFLQGKTGEVLPELIREILDNPS
>LIC10644 RNA polymerase ECF-type sigma factor
MKLSQDHDFSVFYKNYKDSIYKVIRFLSSDPEEVEDVAQEVFLNLYKSFS
NFSPEKGSFYTWAATIAKNTFYTYRKKQKKDMIVEGDAVFIESLQVEDDF
IQNIESKIVEEELREIISSLPEPEKSIILLKEINNYTLEKTSQALNISTR
TVSRKLLKALDLLREELERRKVVL
>LIC10666 transcriptional regulator (ArsR family)
MVQQETDSLSLTFAALADPTRRKILATLRYGEVTVKQLAEPFAISLPAIT
KHLKVLEKAGLISRGREAQWRPSRLEAGPLKEAADWIDEYRQMWEARLDR
LDEYLRELQQKESQQKRKTDHESGKN
>LIC11796 sigma factor regulatory protein
MNLKDYIKSYFQRVGWIPPIINLVCFIAPIVFLQNSSFSEKEKILLYLGI
IGFIYLVNYISFIFFLTKKILPEEEIRSKMRKRYRKGDDRMQSYLFPLPL
DDENYEIYGRTLTYNPIGGDFYNFLTDPQGNYWIGIGDSVGHGYLAGIFS
MMIFQNMSLLVKHNLSPYEVIEQINEDLLKRTEQNPKINPNLYATFLLIK
IDKEGNLEHSGLHPSFVIHQKKTRKNKIIETDGKFVSITMNSTLKNVQGK
SKFQLETGDIVFCFTDGLYEQKNNGNLYFGESLFQFLDEIPKNDLTKIAD
VLFTEILKHTGGKLQDDMTILMIRKK
>LIC10167 conserved hypothetical protein
MKQEVLTTIAEKNPILSRDNLDPIVLSDIEEKMIVQIAEYVREQFTTFDW
RWDDHSEMHDKTVTSLFLVKNDILQICGKNQSKTQEFIRILEYILEEEFD
E
>LIC10168 phage-related protein
MYKSDKKFPDRLKKLIEILGLSQAEFARSIDLKPAFISDLINQRAKSFSQ
ESLLKLRVAHNVNPLWLISGEGQMLITELEIKTDLETDHYRSLLRKIKTR
PQIEVLLESLMEVSDSELEALRVVIEKFRKKK
>LIC12825 conserved hypothetical protein
MMKNKNVIIKPVDKNNWRDFETLFESKGGPHYCWCMAWRMTGEERKNNTT
ENRKKFIKQRVESKISIGILGYLNEEAIAWCSVAPRETYRSLGGDENLES
VWSIVCFFVKKEYQGRGVATTIIENAKDYAKKNGAKYLEAYPVEKNSPSY
KFMGFTSMFKKIGFTFVKKAGTRRNVMTYKL
>LIC10598 conserved hypothetical protein
MIILVMISSPWQAGDGLRAYQGKIDLRGIQDPDFGMTKLNGEWEFSWLQG
PEKGIENHSVEFIGVPGSWTNESKSNQTYPKFGYGIYRLKVFLPEIWKKK
ILSVSLGAIASAYRIKINEQIIGECGTPGIDPDSIVSRIEPRDFLFFADE
DEVQIEIFVSNYTSTMPGILLPISIGPSDSAGVSKAIPLFFDIFSFSSLL
IMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRTSLINSKILMLFFPQIPW
SWVHKINHLTLSVGVPFFLLFFSSIFAPYVSRKFINVGVVFSILFSIVTL
FGDMTFNNQSISIYHYFIIIIICYLFYTILKIDFDKERNYTYILYGSGIL
FIAVLVDLFYARVLKTGSIQTSHYALVFFVFLQSLLLASERSRKFAETRE
LALNLRTSNLELFEMKEQLVQKIEDRTRVLNDNIIQINRELEIAQNVQRK
ILTPLDRNIPGIRFYYEYKPLEKVGGDFLDISEISSGKTRVLIADAVGHG
VQASLMTMALKTEYEELKNLENPAQVLKELNFRFLKKFDSLESIFPCMIG
DIDTEKEEFTYASAGHPDQILQLPGEFPSLLQKTGPILGLFESLEIVSKT
IIFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKTLHEGRESELKNL
IQEIIKIEELTRGENPRYDDITVIAVEFYSVKRS
>LIC12472 acetyltransferase
MFIDLNIHSFECSEFNFELELVEIRRVYTCEELSEFAKINAMSWDPIDVN
VLDFYEQNQELFLEENCPLRFYLGFADGIPIVTCEASYDKDTVGFYNICT
RQEFRKRGYASHILKCAL
>LIC10521 conserved hypothetical protein
MEENYSGKILISNSSIVMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIG
EVIQGIPDHVSRNLLIYSGGPVDPTFISVLHEDNKISQPGIEIIPGLYLA
RSFDTLLELLKSSSKFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFVL
NQDPETTWQEALRSKGGIYKYFVEHTKDPMLN
>LIC12189 conserved hypothetical protein
MINYNLQTKVSEEVYHSTQNFLGIQKGDIQELIEIAKGTKRQRARICSHL
NGNELLQEMFIVHPKGVYVRPHKHIEKPESMMILEGEVDFVTFNDNGEIE
NTMSMGAYHTGKIFYDSMRSSTYHTLMIRSEWLVFLEITKGPFRKEDTIF
APWSPEENDAEKVREFMNKIEQRLK
>LIC10321 conserved hypothetical protein
MTGLKLRIAILILSVLSFFYYRFIPYFPDGIYYKNRMNSAFTNLNEELRH
LETGLGQINSISELENLQLEFPIVSGLKFVTESDLSSRKDPEGKLLKETL
KDGTSRLFFLKPSLVFCLPHPEKKKLILAELREDLFRVSFSGVESMLIPD
LKFGGYAEPGGFNKGRISFLLIEELSRSENAVNRIEIGSSPFIGYYYATP
ENSYGFLKGILILKPGNDGLFFLFLSGFLILLFLIDFMIRILRIKRNFFT
HKEGKEIQEIIGQISKRIDALQTAKQKAIESAQKSEVEEIQTLTSEEVDF
DLQNVPIPMKEVKQEDGPSIFVLPFELKREGYVSPAFLRDPEKFKEPEPI
APEIEKKRSEIFTPELQDLISKVNEPIREKPDIQIAKQEIEPEPISTNHT
ELGPGYMKWLNTLPIRERRKILEVLDELRYGLESEYSFILKYYISVFLDL
KLYGFAIHYYDRRNGSYSPFVTQGLRERTSGNMIFLYDDQYIGKESGTYS
IIEITDERKMDRFFRKKFDPIDLEICTSILTIPLSNFGIPFRFFLFFKDP
LTKENAQEIENLIFHSLEPVIPAFEEYDRKILGELFRDKRDVVSSRVHLM
RIATDGERGLTRSFKIEFHGKNFKTLESLRKKTMSQISEIIGPEDICFGI
GVGAFGLYTRKNLEKQIRSLIDQTGNPYDFVEDIYPENGKNLFIYL
>LIC10386 RNA polymerase ECF-type sigma factor
MAHTSELEKLYNHNKDDLFHYIRKSFYDENSAQDILHDSFLNFFKYYENR
DIPDPTSCRMILFRIARNLIINHSKSYYQRNVSLVGEDAGSSFTSKSPSP
EFSVMEKIDQLDVKNIIDSLLDTISTEYKEALLLRYQQDLKLDEISKILG
MSISGVSRLIERAEKALAQEGKKIGFQPADYI
>LIC10041 transcription activator or transcription antitermination factor
MIENSDVNEWYVLYTNPRSEKKLKRLFQERKIECFLPLISKKKKWSDRWK
VIEEPMYPSYIFVKISFFKDRVRILQLPGAHHFVFYLGKPYIIPEEDLDL
VRTFLETYPDKIQVEIQEKLLPGKKVLIQEGPFAGFKAEIIQRKNEEQIV
VKFPGMNLVTSVTLDIKTLKLEETLGSNF
>LIC20081 transcriptional regulator (TetR family)
MKISATQAATIRKSILQIGIHLIRQNGPTVGIQEIADKAKIPKGSFYNYF
SSKDQFLIEALEEYTQNAILWNDQTLKKGKQKLFYLYEQKVILEKKFLQD
GISCLINVLSQYSSPKQQKLRNKLKLSLNSISKGILNSLLLNPQNYSKEI
SIHIQVLESSWRGAMLIAKATGDPSYLENFLSVHRKSIKEFL
>LIC20178 DNA binding protein
MKIQYSNPIILKSLSFMNAYIENFLNRIYNSKILSNFEHKISLKSFLQKW
FEKNIFSTFLIFFGLYLIIWNRTIPEILTPGDLYKFKLISIICGISIYSF
LLLRLIILGIFEIQISYRYILRNAITAMILSFAFLMYFEKPFSMMITGEL
FCLGICIYTLLESGYLIFSRPYKKEYYFLFPILGGIGFGVLGNFIGTAFY
NVEWNSISYYFYAFFIFTLYLLKRKIKAQNEATTSQNLVLSLNSETQEII
EQPYSMLEDEILEFIEPLEEKNLLKEDDLKRAEERINGFIREKLYADDSI
RLIDLSAYLGVSLHQASFYLNKYKNMGFSDFINQNRMNDAIQFLVEKKNM
NLLDIAFECGFNSYTSFHRACKKWTGCSPKGLRKNAIQLNGSNYEHFKIS
INLQKAEILNKNLESNKFDTVVV
>LIC11231 transcriptional regulator (TetR family)
MAKDTRDLILKTSLKLFSEQGYHGTTMRQVASKAGISLGLAYRYFDSKEA
ILEGIIESHDKILKRYIPDEIVTNPRREDLIVNVSESLISLVKENEDYLR
LYWNLMLQPKIHRLKRRNIHLVNMIFFETSKKTIRSVKPNYSEFEIKNLA
STTIGYMINYLTNKKEFSLDDFRNYLLFTLKNT
>LIC11848 conserved hypothetical protein
MKLQKLFLAVLIAISTAVFSQQNSGSDQKSQPSSAQLGQSILETERKLDE
KIFELNQRLTRHTVLMKMKVRVLPFRTVLFKGKANNDECTPAINQEDPAN
NCIRVEVYDFIRDEERGLNKNVQGALAKYMEIYFEGQNSNDPEPRTEPPR
NINKLKSKIYKNNMVLEDKIISEVMDRGPNTQPSHNDKVEVFFQKDNYPE
YGRPETPAEKGVGKYILAGVENTKTHPIRNSFKKEFYIKHLDQFDRLFTK
IFDYNDQLGNENYKENVDALKDSLRY
>LIC20082 transcriptional regulator (ArsR family)
MRISRYLDILSLVEQLLEAKIHSGNGPKQILSALKALSDETRIRILHILS
LSPLNVQEITEVLRMGQSRVSRHLKILTDAGFLIPEREGSWVYYRIPEEK
KEPDFVSEITELLLSYKDDLPFRTPDQLQISEILSRRDQRNTFYFNNVAQ
DWESIQKDVLDPAIYRKKILSYLPDSSSVIYDLGCGPGGLIPYLLTKSDQ
VIGVDSSPKMVEEAQVAFAGNSHVSLIHSQLENVASSATWSADAVVASMV
LHHLSNPPAVIREIYKILKPGGVFCLVDLKKHNQEFMRDNFSDLWLGFDY
SLLQDWLELSGFTITAHEEFDTDNVFKILIIQATKKED
>LIC13266 RNA polymerase ECF-type sigma factor
MREPILCNREDWDCIQKVLHGDFNSFELLMNRYQGLVYSQAIKAFRNETE
AEDFTQDIFLKAFESLSTFQGKSQFSTWLFVIARNEIIRKYRKEYPEISG
LDALLLAENEKEGEIYSEQESKFLKQENSEKIRNLVARLPELYRKPITLH
YFENMSYKEISKKLNLKMNTLKSYIFRGKEIMKDWLNNEKKE
>LIC10975 transcriptional regulator (AraC family)
MDFFPDLNFLDYLIFVKEVLNRYLEYLYSASIVISFLTGLSGFYKATKNR
LNFVRGIFLMSACFLIIGHSKAFSLMTSDPNGILSLEKRVFFSYYYGFAV
CASLSSTFYVMYLFGALKNPLRLSLYSFLSFPTIFLISLMIENLISIVYF
GKSVLFTLQFSAGIFNLYYVIKYKMKKIYFNYPIQNFTLCTALIVHSIGM
WLGTPNLMILALSFTGFFIIYFFILEYNHPEFWKVSFSSELIEIKSEDNK
IQTLQTNTSPKNLVERLDISRIEEKIQKFVEDREYLDEEIRLSDFSAYIG
LSLHQASYYLNNYKDLSFTDFLSFHRLEEAKRMIEQRPDINLLEVALASG
FNSPSSFRRACLKFTGKPPKEFRNYVLHQTTPSITLELQNQLG
>LIC10678 response regulator
MSPTPNYSSYTVLAVDDSEINLKLIVHTLQPFGFQIFTAESAADARNVLL
TNRIDVLLLDVSMPDQDGFSFCRELREIERFKLLPILFITGINREVGFDE
AISHGGDDFIQKPFQPKELIAKIRAFIRIKILQDELLEQKKNYERELIMA
RKVQQELLPEKELEWNGVSLSTIFQPLMQIGGDYTDAWIEDDSLHIFIAD
CSGHGPSAALLAAMLKMQVSSLSPDQSLQEKVQTLRHNLEKILPDEFSIT
FFYGILHKDLSFEYSNGGHPAPMLYQNGEVSILPGMGPLIIPIEINVKEE
FKSVQLQKDSYMLLYTDGATEISDKSMNILGEDKLKKIFQESVSIGGDIL
VSMMESILAHSDRGTNDDDIAMMVLKL
>LIC13269 response regulator
MKNQSGNPGQKVLVVDDEEDIAELIRFHLEENGYQVDTCQNGLEVLPKLE
KNTPDLIILDLMLPGIGGMDLCKKIKEKYSMPIIMVTAKSGETEAVLGLE
LGADDYVRKPFSTRELIARVRSVLRRIKDEEEDEFEGNITIGNIFLNLKA
HKAFINNSEVDLTLIEYKILNLFMTNPGVAFTRDKLLDRVWGKDIYVTDR
AVDVNIKRLRDKLGDEKERLETIRGIGYRFNEA
>LIC13025 conserved hypothetical protein
MNVNSEKDRILFRKITSSAKSTTNRFGVIQYEFILSFYWIYVYPENFYYF
PENDSILVLHLDKKVLWIYDILCRDSFSISKFLLDWNLEDIEEIRFGFCP
DRFDLLNLEIKNDIITQTDSPLFVKGFQSALKSTFLFPMLARA
>LIC10279 conserved hypothetical protein
MEPFKPKPLLNKSELRQIKKSRTRVEGKKVITDDVKKLKSLNVTPDLPKK
ELVDYYKEPIWIEYYIPRESRFAYEVKYLFIKLIDPKPEPKDVILQEAIS
KEEFIDVLDVMFRYPEKENLIRSSYVNTFSFLESISANYKQFLKTKDVYD
LRVPLFHTEALMKWEPTVATLEFLGPYTIYNLNWLIRKLNEMEEEFSLED
ETISLLIKRRNEYWEENSLPIDEDFELFAALFYEQAFPHRGSEFEDNLLF
KDTNKE
>LIC10425 conserved hypothetical protein
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASVTGINNQKDLKEQLGELFF
LGATPHVADLIQVDYDSETDTFGLILPFRFDSSLRLSIREWLTLRKILEE
VVEASSDPKTNSTARKILQKIISIVPIAGQEALSVYKTNIQNAIQNEKSL
ILEYQSRMGEKSTLRKVDPWFLFHSLEDYLLGYCHERKAPRNFRLDNILS
LKIGSDPILQPAGQKKSDYIREFEEFRKSWENSSGIAEIWHTREVFYNLN
RKLDLERTEKTQKLDNVVYHLSKAKIREENWFLETILPFGKNVILERPTH
LAKRILRELESILH
>LIC12619 conserved hypothetical protein
MAGKITHLEVLSQICKHLDHGTADQRKIAVLMRAESNRKFANIGAIAPDI
FYFYHIFSPHKTKKATRWGDMSHHNSVAELVLSFLDLILQTEEGIHRDRY
IAFTLGYICHCVVDIVTHPYIFYISGDFYNKDKKISSLAQYNHMRVENAL
DSWLLDYRWGMTPKEYDFVHHVDAIFKSEKKIWKMDPMLWHFWLRGLKST
FSEEFKKYYIGSEDKIIPGDLLNESFLGYLEFHKLMDSRSRWVRGTLKFL
DQITFHKVRSSVLMLPLKEHIDKRIMNEEKKKWNYPADPSIVREDSFVEL
INSSAQNGKEALTHAWNYLENKMSRSAFLKEYQGYNLDTGLRFQGVDSMK
EFSPLEEV
>LIC13242 response regulator
MKVLVLDSGTTVRKIISSFFPTEDFQIFEAGTAKEGLDLTFQEHFDLITI
GMVLPDSDGFTVCKTIRNGLIDNKQSICKNSKIFLITSGNIETNRIKSVE
SGFDGIFPKPTGIEEFKTVIEEIIKLAYQSSPIESKKAGKILIIDDSELN
LLLLGKILEKNGYSFQAFTEGKKAYEYLQSSNEVSYILTDWIMPDFSGEE
LVEAIRKQEKFNDIPIAVITGIEEKEDFKISIPQKNIYLLQKPYFERKIL
EYIQKV
>LIC10013 sigma 54 activator
MNSEEHIFIGNASNSIKIFNRLKSLSQSNLPLFVTGGPGSGKTFVSNLIA
SLSGTNPQIFIIDSDHHENQRSLESALSVKDNVYFLFKDFPNFPKENQAY
LLKRIRENQNNSRFVFISGKEWKQKLEAGQILESLYFEISNFRLDLPDLR
ERKEDIPLLIKHFLEILSDKYKRKEIRLSEKLYHILLNYDFPGNIRQLRN
LLESMISLFAVRILDVKHLPPQMFETSYVYSEFIEVKTGIPLRDYEREII
KKNLILVNGNREKAAKILGISERTIYRKIIEFGLSDEVEGKNLPSDV
>LIC20254 response regulator
MVMKTILVIEDDPDIGNLIRKSLDSAHYSTTLQTSGEEGLKFYKANHPDM
VILDLSLPDIDGIEVCRTVRRNDENTPIFIVTARNEEIDRIMGLELGADD
YITKPFSVRELKTRVDVFFRRWDKKAGIKPNVGASGEIIRGALKIDPVRR
RVTLKDNIVNISRKEFDILQLMAASPGKVFSREMILEAVWGMEWDGFERM
IDSHVKRIRSKLEKNSAQPEWIETIWGIGYRFTDNYDNIVIPD
>LIC11353 ParB family protein
MKIRVSDIKVKNRIRKDLGDLQPLKESIQKLGLLHPILIDLENTLISGER
RLESVKILGWEYVDVRIVDIRNKKERVQMEAEENNIRLEFTSEEQERVRE
LLKRYSYTTVFGRIFAWILDLLDWLKRFFQKK
>LIC13292 conserved hypothetical protein
MKFWFPQERRFYFFSMYIFLILLWIIEEVLTFAFDINWIERSQAYFTTIE
AAFGLLSIIGIYFLFQEIRNTKTDIESAKIMIEGLKNKNQFLVQTNQSFW
ESLQRQLEEWDLSDKEKEIALLLLRGMSNHQIAAIRGKSLKTIENQTFSI
YQKSGTTGKLEFIAYFISPLLPEED
>LIC12666 acetyltransferase
MRLPASPRYLEMHVHVRKARSDDQIQLFPLVSDFATSFLPDPSAFAKAFV
QILQQDDAALLVAVHDSHLVGYCLAFDHFTFYANGRVTWIEEIMVQPALR
RKGIGHMLMKEAEAWATTRSSKLVALATRRASEFYARISYAESAIYFRKI
LE
>LIC12257 conserved hypothetical protein
MPKSKTNSKKFQIANLLPEHREASIELVNQFFRLINSLQLDGIFKIRPRA
GTKMIDVYLKLKGTGKVLLLGGFLGDELVSLLIARTEDKPYLEEQKTLFI
DLAVTKRGKQKSGYMKPLVLACESWAKDQEFKSIELRAIVENENAVSFWK
AMGYDPFYIRFRKSFKMDSI
>LIC11817 RNA polymerase ECF-type sigma factor
MSAKKEIWEECSTLIRKTREGDQISFEKFLRLVTGILRSYLSPRISNEED
REDLIQEILIGLYKAWDSYREDRHPAPWIFAIARYKTIDYLRKKKSGDRV
FATDNLEFFASPEPIEEEPEKAREILKKWLDVLDERQKQILTHLKLDGMS
VREVSEKTGLSESNVKVITHRAVQKIRKHFSLDL
>LIC11482 conserved hypothetical protein
MASDLSFVDFIVDQVKDAGQIVSKKMFGEYAIYCNGKIVALVCDNRLFIK
PTEGGRKWIGNVQEASAYPGAKPSFLILDRLEDKEWMSHLVKITVQELPE
PKIKSKKKNVSSQKKVRINKK
>LIC20111 sigma factor regulatory protein
MTMKKSLRLQIIVIYTILTVVNLTFVAVMIFENQTDLLISNFTLESDRVA
REILKKIESYGNINFENSSQTDEFQTKLLSIGLTNFSVIAAEDNSLEKTR
TLLSNGATATISDLKTKLTNMSNAKAALNTSYDIELDTDHFIVNLIFYLN
PKTFLISQIKMKEMVDRLKSLYIQLGLLLIWGFAFHILFGIFLYRKIFVR
LFLLKEVSETMATGNLNARISWNASAHDELDVLGNTFNGMAEQISSQFDT
LKLKNAQIQTELEIGKNVQECFLPEKRKTFNLINVEIIYQPMREVSGDIY
DIIEISDTRTAFFLADATGHGVSAALITSIIHYNVENIMKETVNPAHIFN
RLSDNLFETLQGTFFATGIFILFEKEGGYAYFCSAGHNPIYYYRKEQNKI
VVLESTGFVLGIGIPDEYSVLKIKTSPGDKILVYTDGVLDAANEKTTEPF
GDDRLLSAFQKYATLPTTELTEKLREEIHSYANVFPDDVTFGILEIT
>LIC10568 conserved hypothetical protein
MQAKVVEITENYVNLLKTLSNLMGTSIINYKSFDFYSNPASNWFTRIVLK
ENLQSEDLLLEIEDLRLKGFDPYILDFLNTRAHEVFIYELGYNSCDEQIG
MFLEGDAISFNKKLNTNLNIQKIELEKDLKIWLKILNDSFESEDRLSLYS
KLLNIESFRLYGGFVNGQMTTTGMTFYDGESFGLYSITTDRNYRGLGYAS
NIVEHILGEIREVFSGFIILHATQAGKKIYEKFGFENSILLRHWGKL
>LIC20134 conserved hypothetical protein
MACHEIAALRLGMMNLIGIKDETTIRHEQSEIGTVLESPGPIRSLAEAKD
FESLIKFYEISLTDLEEKISKMKKDDPKMAYYRSLLILTKKIEFELKNSV
FIFQNFFRDLEEIHDFVHEIFPA
>LIC10332 response regulator
MKEKVLNLLIVEDNERLRKSLIEGMKEFAKLKISYDCAKGEEAIDFALKN
EFDVLLADVRLAGTLSGIETIVAIRKEYPRKPVVIYSIQDSDEYFRAFRK
AGILSHYAYVRKSNYLLPQMIVPLIELAYEGKSFIDPEIETRIVEVKDQD
ENSPMAILEPNEKIVAKMLGEGLSNEQIAARLGFKDKRTISRINGQIYAA
WDLNESNSDEKVARTRAALIVRENRFLQWEEDGNVYYRNGSGDWIRWESN
LEL
>LIC11283 conserved hypothetical protein
MTSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNQG
IVRNQMGPNGGYVLAKTPASINLKEIYEAIDEKIFQMHSKSPNKKCICGH
AIQPILSKVYEKAQKVLEEELGSTDLDSITKEILNFSKK
>LIC12438 transcriptional regulator
MTKSIFKVVIKRAFITYFSKFIKKDLYLKIESTLSMANKIITIPLENIDF
SSPGKRLRYAIKNILAMNDEDFATSIGKSQNYISYICNDKRPLLDKLAAD
IETTHGISGLWLIKGQGSPEVNSSLNENSGTVKKMKKRDYLWNKISNDKA
EDILISFYDDIPNETRSLIYQMIVAVSKNSRYS
>LIC12066 transcriptional regulator (MarR family)
MQLQLKNYILFLMNEKLSEQSIQAWAAGLKFYSSASSQIESALAKTNAIS
LTWYDILYTVYTKSKKRSRMSDIAREIILSKSALTRSVDKLVTEGFLKRE
KSEEDAREFIVEITFSGIQALRNSWPIYEEGIREIFASKLTFKETSELLR
IFRKLNKY
>LIC20105 DNA binding protein
MMNILDSILNQEILLSLIRFGAGFALVLGIGNWIRARKQIDYLVSSVLIF
TAIFQFIDESVLNTIPQTWLRKLLFLIDIVALAASGTLIFLISTMSFKRY
SKLPLIYYWNLIGPLILSLPIATFYEQQGSKELEFFLFAADLYVFVYFVI
AVANIFIDKKYESSAMSFKTILSLVILISLCIPLEILGIVFENKSLILLS
SVHTTFTVIFYYFLTLIRPNLLDIISSESGKSFVKRSLLHDVDISALEKK
LIHIIKEERIYLDEDIRLPDVSEELGISVHQLSFFLNNHLGMNFNNYINR
FRVEEAKSMLINDPSRSVVSVGIAVGFNSNSSFYKAFLKETGMSPKQFRE
TQTKVIHFQSSSADIQFRN
>LIC20276 conserved hypothetical protein
MLKINVLSNKEGFRKPMGEHYPYIKIFADIIESGAWANLSSAAKTLYLVL
LKFSDQHFKPVWPSTEVLLRLTGFKTKKSIIQGKRDLIQAGLLQVTPGTG
HTSSRYYFCFNYPGSKIPPQGYNFGNPGGGEKETQGVGKNGSQGSGEVTP
NHINITITNNQHQEPEKTKKQVSLDELGKEYGPATLTEALAIAKGRGMET
NLRYVKGICKNLTKTNESLVPEFNQNQGEPYEKETTWNGFLRWSKDRLTK
SSIETLEKIRVEPDGRTLCILDPVTESLRMIIAKYFTEEIRPPILVIFSA
KNEENRITSTKH
>LIC12452 conserved hypothetical protein
MERDRTAIKGLIEALLFVSGEPLKLASIAKSAEIEKTEAREILDELILDY
SEKNGGFLLKEIAGAYQFVTNEGFAELLGNIFKEKRREQLSKSSLDTLAI
IAYKQPITLPEIDEIRGVSSRAMVTSLISKKLIKPVGNKEVPGRPALYGT
TKEFLIHFGLNKLSDLPAPVEVKELKFENLDDLLEDE
>LIC11192 chpI, ChpI
MKTAISIPDELFRAAEKIAKKLGIPRSQLFAKALEEFIQSHSKESVTEKL
NKIYSNKSKETRNNITDLSVESLRKSLKNDSW
>LIC13230 dead, ATP-dependent RNA helicase
MKGTSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDII
GHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKL
IKYKGNFEVVPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHL
DEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFSATMTDDVLTL
MKKFQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARLIEYRNVKL
ALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMSGFRKGSIE
ILVATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFS
FIVGKQIYNLKKIERINGIKIEAGKIPTLDDLEETKIHSYTSKVRSIVDA
GHIGKYVNQVEKLMGDDYTALDIAAALFKMTILKDSVTFDDSVQFESDFK
YEEKHSTKKKSGGGRYRDRNFGRSGSGSRSKSNSNSHFGNNSKDGSRSKF
SKGDKNQKQGGGATSFKKKKK
>LIC12312 glcK, glucokinase
MKSFLGIDIGAGSIKASLIDSNGNVLKSSFRKTGAETNEKQFLDSICDIV
SEMKNSSLTAVGIGSPGPIDSENGILIESANLPLLKNVTLVSHLKEKFSI
PVYYNNDANLAALGEYHFGLGKGSPNLVILTLGTGLGGGWVYQGKLFNGY
KGSGMEAGHVTYLPNGSLCGCGQRGCTEAYFSASGFLNRYKEKTGEVLDS
AEEFFEKTRKGDKTASILLNEGIDALAQLCRNLIHTINPEKIVFTGGLVK
SWDLFGDSLQNRIRELIFPIFRTYTQILPGGNVSGTLGAAALCMENLE
>LIC13220 hepA, ATP-dependent RNA helicase
MEEVLQLSLDFEPKSSSGYRGDFCYLTNSPESGIGKIVSSAEGKFTIEFS
VSQTKKTVSENSTYLRILPGYPSSLRNVEEYSSLMNLALTAYELKLTHAF
DKLSALSNSRTRLLPHQIESTYIVVNSLRPRFILADEVGLGKTIEAALVM
KELIFRRGYKKVLIVAPSPLLVQWQQELKNKFNEDFKIVKRKNFHTDGEK
NWRNFQHVITSIDFIKNPKYAEEILKTKWDIVIFDEAHRLRRDYHKITRA
YLFAEKISKKCECLLLLTATPFRGKLEELYYLMHLIDPNILGPYHTFVND
YILGNKADLKDKISKVLLRRRKIEVGGFTKRFAKTVRIELSSVEREFYEE
TTNYVRREYNLAMRTQNRAIGFVMIVFQKLLDSSVFALLSALTKRKFLLE
NKFHHIQKMESNLEEWDLDETEDVEEFVSGLDESVQLDLQSLKRELLSLN
RLILLGKKIKEDKKSIKLKETILKLQKEGHSKFIIFTQFRTTQDFLASVL
SDFQVTLFHGSLSADAKEKAIVEFKTKTEILICTEAGGEGRNLQFANVLF
NYDLPWSPLKIEQRIGRIHRFGQKDNVFIFNFASKDTVAERILEVLTNKI
RLFEESIGSSDELLGAIEDELDFNSSFMKFVTGNKSKTEMEEEIDNRIKI
AKKGFEKLGALVTPKLIDFNLQDYYSHTLEERSFNNTHLEEFVSRFTKIF
PEEAGFQLLRKKPQIYEIDSPQYKGKYGTFDSELALQNDSLEFLAFGHPL
IDKTVSYLIQNQKGWSTAFHSVSNKEYYVFLVEFQFTLNRTELFYFETNP
NTGSVKQIETLPEELREYNSSVRPSEISSHPELPSRLEENLIRTFISLDE
IVESRKKELGDQTLDLFQKEEFKIRTSNQNTLRQLEEKLMRQEAAFKWEG
KPEKKSAMNRTRNEIQKVKEDFDRELRKVRNGKTIQHRFQLFQVYLPS
>LIC10526 hrcA, heat-inducible transcriptional repressor
MDLTERHKRILKALVDEFIQENRPVGSKTLFDKHDIGLSPASIRTVLKDL
EDFGYLASKHTSGGRIPTERGYRFYVDSLVILYELTLKEKQRIQQEYLKM
QFKLDQILKATASVLSSLSNAAGIVIGPAKNLDTLKHIELIHVRGDEILM
ILVMRSGTVLHRNIFVDQNYSQEALYQVSKYLNDNLKGYDIYEIQNVIIP
KLMIRKDGPEDFIRIADLISSAMTPDNSEVTLYIDGFKNLYANFRDEEQQ
LSQVLSLLDDQGFLKAFFSEYIDQDGVFTIIGKDGDRSMSGVSIITSNYK
MGEKKIGALGIIGPQRMDYNRALPLVDFTSKLVSEMVTRISK
>LIC10994 kdpE, response regulator
MNPKILVADDDDRIRKMIRISLNASHYEVIESATIQETILKAAKNSPDLI
LLDLQFPDGNGITALREIRSWSETPVIVLSVLASDPEKISLLDGGADDYI
TKPFSMGELLARIRVALRNKTQDPGSPIFISGNLYVDLSNRNVKVSGITV
HLTPTEYIFLTFLIQHAGKVLTQEQIIRHVWGPFAKNESGSLRVHVASLR
KKIELDPSSPELLLTEPGVGYRLAIHL
>LIC12305 lexA, transcriptional repressor (LexA family)
MFSMKDLTDKQQAVLAFITAIIKERGFPPTIREIGDEFGITAKGAYDHLK
AIEKKGYLKTAKNQSRAIELIRQSPMESLPVQATSIPVIGQVAAGLPIFA
EENIESYIPVPDEMAKGNVPMYALRVQGDSMIEVGINDGDIAIIEKRDIA
RNGEIVVALIEDEATLKVYYKEQDQIRLEARNPKYKPIKTKKATVMGKLI
GLYRIY
>LIC11455 mfd, transcription-repair coupling factor
MKDLLNMIGDGVFSRFESSLKKKNSTSKIKSSFADSSNLKTQSNLTLKTQ
SVSASEKKISVNTEVVGSVYSVTTGSHSILASSLFQKLNQTILVVSENNT
SAEFLFREALSFLPSNDLIYLPGQEVLPYEYMRYPSEMKRERIKAIAKIL
SGEPVLIFTSVSGFLKTLPPIQTMQGRAIVLKKGKEIDLESLLIQLIDLG
YKRVQVCETFGEFSLKGGILDIFSSYSTEPVRIDLFGEEIESIRTFDPDS
QRSMTDLDQAVLLPADEYILSEEQKKEYQNFLKSSDSSLHLPEIPEGNYG
IYYEELIPLVRENHGILSYFSKPPILIFPSANSVKERLFHLEKEYLSLFE
KRSREVLCAPPEKLLSFGEEFKVLSESIGLSFVGLPPRNENDLVSLLKEA
PSFKGKIREVREKISELRAKGGWKIVLTSSFEAQTKRLQGLFEKEGVILL
NEDSTEPLPFHLGNHKSDTFLVLSELRNGFILENQKILILSENDIFGREY
KRKTRFKKQNSKALQSFIDLKEGDYVVHIHHGVGKFLKIERTSAGGKERD
FLKLEYSGGDSLFVPLDQISLVQRYIGGTESPRLDSLGKSTWKKTKDRVQ
KAVEALAEDLVQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEA
IEAVKKDLESSRPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPT
TILALQHYNTFKNRFENYPVRVELVSRFKTPAEIRDILADFSAGKVDMVV
GTHAILSSKLKPKNLGLLIIDEEQRFGVNHKETIKKFKNLVDVLTLTATP
IPRTLHMALTGIRELSIIATPPKNRQSVETYVLEEDDDLISDAIRNEIQR
GGQVFYLYNRVETIEEETNYLSKLVPEVSIGILHGQMTEDEIEETLLDFY
NRKYDILVTTTIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDR
KAFAYMLLPKDRVVTEQAEKRLNTIFEYQELGSGFKVAMRDLEIRGAGNL
LGKEQSGDIMEVGFDLYVRMLEDAIARIKGEEIVVEVRTSVTLNTNFFIP
ETYISDTRQKIEFYKKLEGARDLDEIEEIYSEMLDRFGEPPEDAKTFILL
EKIRTLASNLGFEFVTEMKDEIKMKSGSYFRGDHTKIIQLISARTGLTLN
PKEPNVLIFQTEKKLEKEKLDTLIFLLSEMLPSKKV
>LIC12706 nusA, NusA
MAVKKIQSEGNLLEAIQQFCADKSLDREAVMGVIRDSLITAYKKKSGLEE
SSELEKPSPVTVEFASGKDSVVIAIAKKVVSGNPSSALEISLEDAKAIDA
SAEIGSVISFREKPVELSRIISSQAKQMVFQRLKDMEKELLFNEYKAKEG
ELTHGYFQRWKKDAMSIDLGKVEGIMPRREQNPGEKYHSGDRLKAIIQRV
ELRPREPIPVITLSRASADFVRKLFEMEIPEIYDGLVEIINVARQPSIRT
KVVVRATRGDIDPVGACVGMKGVRIQSIVRELGNERIDIVESSDDASEFI
ANAISPAKPVEVKVDGSGREAMVVVPDDQLSLAIGINGSNVKLASQLAGY
KIDIKTVTQYNAELASPEARERLERLFYSPVEETKVSMEQEEEEELTPLE
DLPGLSARIVGILKSEGIKDLETLIEYSQDDLAKLQGIGHTTAGQILKLL
RESVEWVEDN
>LIC10404 nusB, transcription termination factor
MALYQLELTQPPLKEVLKFKWYDKKTEPEERDFAVSIVNGVVKNQEQIDT
LIKKYSKNWDFSRISIVNKAILRLSIYALLYTWEVPKNVTIDEAVELTKE
FESEESARFVNGVLDAILKNEIKSDG
>LIC10748 nusG, transcription antitermination protein
MGTKKWYALQTYSGHENKVQKNIEKLIQQKKLEEKIFQVKIPTMDVAEMK
NGKKKVTKRKLMPGYVLIEMEMDDDTRFLIQSLPSVSTFVGSKDGGPEPL
SLEEVKNLFSESGDVASEEPVAPKILFKVGDSLKIIDGPFANFTGLVDEI
FPDKGRLRVKVEIFGRSTPVELDYLQVKTEN
>LIC13488 parB, ParB
MALKPKALGRGLGNLIPVNESKTPIDSSSEGALREIKISEIRPNPGQPRK
TFSEESLKELSETIKAHGVIQPIVVKQLDSGYEIISGERRYRACKLAGFI
KIPAIVKNVSENQSMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITD
ISARVGKNRSTISNLIRLLQLPDVVQDLIKNGRISEGHARPLLSLADRKK
IEQLAYQIAEKGLTARQVEELVSNISEGRSSIPEKKRSRKDVNIVELENK
FRKKYSMKIEIGHNQNSGKGKMTIVYPNLEAMEKILNALGL
>LIC11791 recG, ATP-dependent DNA helicase
MSKPLIVQSDRTMLLEVDNPEFEACQSVVSKFAELEKSPEYLHTYRISPL
SLWNAASIKMSADEIVECLEKFSRYSVPKNIVNEIREQISRYGKVKLVKE
ESGELAILSNEKGFLQEIGNHRAVQPFIESTFPDKIYIKKEYRGHIKQAL
IKIGFPVEDLAGYDEGNKYGFNLRPTSISGKKFGMRDYQRACVEVFHAGG
GNEGGSGVVVLPCGAGKTIVGIGVMQIVGAETLILVTNTLSIRQWRNEIL
DKTDIPPEDIGEYSGEVKEIRPITIATYNILTHRKKKGGDFTHFHLFGAN
NWGLIVYDEVHLLPAPVFRMTSELQAKRRLGLTATLVREDGLEEDVFSLI
GPKKYDVPWKELESKSWIAEAKCKEIRVNMEDDLRLKYSIADDREKFRLA
SENPEKMKAIGLIMKKHSESHLLVIGQYINQLEEISKKFNIPLITGKTPL
PERQTLYDAFRSGKIKSLVVSKVANFSIDLPDANIAIQVSGTFGSRQEEA
QRLGRILRPKGHDNTAVFYSLISRDTNEERFGQNRQLFLTEQGYEYEIYT
LDQFREAQEELAQLQLNNV
>LIC10738 rhlE, ATP-dependent RNA helicase
MKFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTG
KTVAFLIPVIHNILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGI
RSVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMIKSGSIDISNVEFFV
LDEADRMLDMGFIQDIRWLLHKCKNRKQTLLYSATLSVEVMRLAYRFLNE
PVEIQINPEKIITERIDQKIVHLGREEKIPYMTNLIINSKEEGQGIIFTN
YKANIPKIVYTLRKYGVPVTGISSELDQKKRLRLLRDFKSGKYRYMVATD
VASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRKGKAIGFCSESD
YVELEKIEKYLKQKIEILEVNEEYIQFPAGDFQSFIGGDSYDREKETHFK
QNGKRPHDNDRAPHKHDRNRKRDKRHTSHTHSTAKDSHKKKPAAAIQEAE
LFLQKADSVLSSEPKGKKSAKDQHRFQNKDKQSRTGRGAQNSRNQNKNQQ
FGKQYDKNKRNLFDINDTVKEDTKKKKVSIWQKIKSIFGG
>LIC12636 rho, Rho
MATARRDNKNRHQHSNHNHNNQNDSGDSFEEESTNQESQEFDSSENSDPR
SRKRKRGGYEGPAPAPIDLVELKKKAISDLIEVAKSLGVENTGGLKKQNL
IFAILQAQAERDGQVHAAGVMEKLPDGYGFLRSPDYNYVPGPDDIYVSPS
QIKLFGLRTGDTVEGQIRPPKESERFFAMLRVETVNSYTPDVAGKRALFD
NLTPLYPNERLKMEYDPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL
MQNIANAITSNHPECSLIVLLIDERPEEVTDMARHVRGEVVSSTFDEPAQ
RHVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNQVIPTSGKILSG
GVDSNALHKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKG
TGNMEIHLDRKLSDKRIFPAIDINKSGTRKEELLITKDVLQKVFVLRKVL
SPMSITESMELLLEKMRLSKTNDAFLASMNTQ
>LIC20066 rnC, dsRNase III
MSFKKAQSHFFLKNPERVRSLQKLSKKIGIKFSKVEYYNTAFIHSSYKNE
NQEILEDNERLEFLGDSVLGLVAARSLFRKYPKANEGELSRIKSRIVSTP
ILNSISEKLELSEYLLLGKGEKNSLGKGRRKLSANLFESLVGAIYLDQGF
EIAEKFILRHLSEFVENPEKEESVRDYKTQLQEYSQKHFKILPIYRTKSE
SGPDHAKTFQVVVRIRDQWEASGSGVSKKSAEQNAAKELYNRIRKKT
>LIC10035 rnR, ribonuclease R
MNIKKKQTTENKSVKSNRKKKTFDKSNKTKKERTDGFRENEIGKKILKYI
QSRAGSVIQFKDLNAKILREENQNSYGKKREKWEFQEKEREILETLKILE
TEGLIELEKKNIIINSNQKLQGTISISKKGDGFVKLSSGVEIFVPNQYTQ
SAIQGDLVEVRPYGVGKKRRLEGEVTEILRRGRDLYRMIVTEKEPKFIFG
KLLDIDGEEKEGYLLRKTILTDLQEEIQSGDVLIVKLKEETEHEKNLYEV
QFLRFESDTKEDLDLMRMLMKYNYNILYPENIILDLPEEVNESTVDDWNE
RVDLRNLKCITIDGEYSKDFDDAISFIEEKNRIRFYVHIADVSYYVRPGN
DLDEEAYNRATSVYLGSRVVPMLPPELSESLCSLIAGKNRLAFTVEMEAD
WKGKITHAKYYKSIINVKERYTYNKAESEILSGDSDNWIFRMNEFAKILR
TKRIEDGRVDLNLKENKVVTDSEHNVIEIAIQDRLQSHILIEEFMLSANI
KVAEYIRKKKHPTLYRVHEAMNEEKIESLNAFLQLNATKILLKDSSYESI
RSVLKELEAKPAERLFNMFLLRTFMQAYYSGEHLGHWGLGFEDYCHFTSP
IRRYPDLVCHRVLQNILLGKKPIYTPEEIVTFGLHCSHQERKASDAERDY
YKLKACRYLEKTGIKEFSATITGCRPHLIFVDLENPAVDACLFSSEFTDE
GEIRLETDFSFYSKKYSKIYTLGDKIEVELDRIDYEEIKIFVKMKKFQKK
V
>LIC12846 rpoA, DNA-directed RNA polymerase alpha chain
MSLKSLLKGFKRPKKIEFNTEANTPNYGKFVAEPFERGFATTIGNSLRRT
LMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEE
KDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDL
EIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSD
YEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEELEEEDDELDE
ADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKH
YSDQCLQELKVKLSTLGLSFGMRDF
>LIC10753 rpoB, RNA polymerase beta subunit
MYGQVERKRVNFGKITNLDYLPNLIQIQKRSFDWFLQADVKDETKRRHQG
LEAVFRETFPIESPNNDMIMEYSHYILGEPKRSPQECKDTDATFAMPLKA
VIRLIIKETGEIREQTVYMGDLPVMTEQGTFIINGAERVVVSQLHRSPGI
FFSYDMERDVFSARVIPYRGSWLEFEMDNKGILIAKIDRKKKFPATLLVK
SLGHGTNEEVLRLFYSSKKEKIAGATSKDLKKILGRRTINDIINMETGEV
MLEAGSKINEDNISILKEMKVKEVELIEFPKGKDNPILINALEKDGVNDY
EDAILKFHSLMRQGEPSTIENATTELTRLFFSPKTFDLGEVGRYKINSKF
EFNNPKEFSGEKSRVLRPADIIETVRYILNLFSETENYYPDDIDHLGNRR
IRSVGELISNQLKTGFSRVERVIKERMTVQEIETQTPQLLISIKPITAVI
NEFFGSSQLSQFMDQTNPLAELTHKRRLNALGPGGLSRDRAGMEVRDVHY
SHYGRMCPIETPEGPNIGLILSMSSYARVNDYGFLETPYRTVKNGKVTGQ
IEHLTADKEEYHYIAQASGVIDEKGELKNKLISTRHRGDFPFRNPSEIQY
MDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLREEAPFVGT
GMETRAAYDSRICIVNKHDGVVTSVDAENIVVERKGGKESDTYQLTKFKK
TNQGTCFNQKPIVGVVHSEINGKVSKVSKEKIEVTGENGELKEYVLQIGS
KQYSPIVSAGEEVKRGSTLAGQVVVGEKLDEMGNILVKGTVLADGPAVDN
GVLALGRNVLAAFMPWEGYNFEDAILISERIVRDDVFSSIHIEEFEIQAR
ETKLGPEQITRDIPNLSDKAFRDLDETGVIRIGAEVKPGDILVGMVTPKG
ETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGFEGTVIDIKRFSRENQDE
LPAGVEEMVKVFVARKRKLLVGDKMAGRHGNKGVVARVMAEEDMPYMEDG
TPLDIVLNPLGVPSRMNLGQIFETQLGFAASKLGISFETPVFDGAEESDV
DNFCKEANLPLNSKFKLYDGRTGLPFMNEVFCGYIYILKLAHLVEDKIHA
RSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASHTLQELLTIKS
DDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIITDSEGN
TVDISDYEDEYSKSKKKIKFETIENA
>LIC10754 rpoC, DNA-directed RNA polymerase beta' chain protein
MRSHNDFESITIRLASPERIKEWSYGEVKKPETINYRTLKPEKDGLFCEK
IFGTTKDWECYCGKFKSIRYKGVVCDKCGVEVTHSKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLDMTVNQLKSVLYFEKYVIIDPADSGRNRGELI
DEEEYHGYLDEYGDKFVAGIGADAIKELLARIDVDAEARMIRQKIQDKDK
ISDKRILKRLEVLEAFRDSGNRPEWMVLDIVPVIPPELRPMVQLEGGRFA
TSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVDALFDNSR
RKRAVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KYHEMGLPKKMALELFKPFIMKRLVDLDLAPNIKSAKKKVEAEDKEVFDV
LEYVVKEHPVMLNRAPTLHRLGIQAFLPVLVEGKAIKLHPLVCHAFNADF
DGDQMAIHVPLTPKAQLETWMLMLSPHNILNPANGHPICGPTQDIVLGIY
YLTSELPSEPGVPLKSFSNLEEVHYAIDRGVVEFRTKISVYHQGKILETT
PGRLIFNTILPEGYAYVNRPLSDKETNRIIADVYDKYGPAKTVLMLDDIK
KLGYRYATLFAPTISIEDIRVSPGKVGLVGDANKEVEKADSEYRKGIITN
EERRKKVIEIWTKTNDLITESMFKELEKDKGGFNPVFIMAASGARGSKQQ
IRQLAGMRGLMAKPSGEIIELAIRSNFREGLSVLEFFISTHGARKGLADT
ALKTADAGYLTRRLVDISQDVIISEDDCGTEESISLGVVKEGENVIVSLN
DRVFGRYTAEDVIDPVTDQVVYPRNTLITREVGQKVENLGYDKIRVRSPL
TCESKQGVCIRCYGMDMARLIPAEIGEAVGTIAAQSIGQPGTQLTMRTFH
IGGAASAKVQEKEHKVSYTGIVNNINGRLITNEKSQSVFSRRGSIVIQRL
IQQYKTEELSNLRVENGQKVDKGELVATSPAGENITSEMPGTIHIENGLF
RILGEEAVIPVKTGTIVNVKVNDITQPNQPLAEFDPYNEVGISEIDGTVQ
WMDLEIGKNVRRDEDLRTSNILLKVIEQRREKLNPRIAVISGGSREEYSV
PVDAIISVQDGDKVKAGDILFKIPTVAEKTRDITGGLPRVDELFEARRPK
DATTLAETDGKIEISGEIVKEKRVLYIHPDNPDLEKVKVTIPIGKQIRVR
NGDFVKRGDQIDDGNLDPHDILRVKGVTALQVYLVQEVQEVYRLQGVHIN
DKHIEVVVRQMLRKVLITDSGDTSFVNQQQIDRLVFNEENKRVIAEGGSP
AESVPILLGLTKASLNTESFFSAASFQETTKVLTDAAIKGKTDNLMGLKE
NVIIGHMIPAGTGTKKYKDIAVFKSAYGDLDRPLEEEEEEEIPQAIAEES
DAEE
>LIC11701 rpoD, RNA polymerase sigma-70 factor
MENLQSMPEVQKIISLGKANGEVSYDDINEILPDKILNSEKIDDFFTLLH
EMGIEIVEEYTRNTLEPASTLVPKDDSKPARKKKESSASTSGSEDPIKLY
LREIGKVSLISGETEVFLAKRIEKGEKIIEETILSSSILRANYIKLLPKI
RSKKIKVYDLIRVDKMYALNAEEAHKLEELFFKNILVIQEQEKVLQEAVS
KIRKYSETSKKYKEFKEKIDASTEIIHNAIRELGVSQKEIQKISQKIKSM
VFRIKEIDRHFLKIKAQYGQDVRDIKAFNRFIEKNEKLDDIEVKMGVNID
EVREVIKDIRNNERKLRRMEQEAGSTVQEIKDWGEKIIKGEREISQAKKE
LVKANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFS
TYATWWIRQAITRAISDQARTIRVPVHMIEQVNKVIRETRLFIQEFGRDP
NNEEIAERLGWPVQKVKMVKNVAREPISLEIPVGSEEDSELGDFIPDTEV
ETPVNAAASSILAEQIRQVLHTLPAREQKVIRMRFGLDDGYPQTLEEVGY
QFKVTRERIRQIEAKALRRLRHPSRSKKLKDYIDG
>LIC11545 rpoN, RNA polymerase sigma-54 factor
MNLSQSLVQKQTQKLVMTQDLRQSIELLPLSTLELSDRINSELVENPMLE
EEYASERNRTPDLYSRDDLKRKEKNDFLKNSDVSWQDHFSLDKAGGAGTD
ASDRNQKYIESSPEKSSLSEHLLWQLRLSNLKPDEISIGEILISMLNDHG
FIPIPIPDLCTEMKLNEKKVRKVLDQIHRLDPIGIGAKDVQETLLIQAKI
LKPEDLNLHILIRDHIKDLEKLDYKSISKKMEIQLESVESLASEIKKLEP
YPATLYTPNKPDYVIPDVIVREVDGEFDIYINDEWIPRLKVNKEYKNILK
NAKESDKEYIATKLSSAEWLIRSVNQRRQTLFKVTSAIIEMQIAFFKKGI
QHIRPLTLKDIAEKLEMHESTISRITSNKYIQTSRGIMELKWFFSSGVRS
TEGGIESSKKIHDLIRNLVKEEQSDNPLSDQEIVDAIGKQGIEIARRTVA
KYRKILKILPSSQRKKVKSLESR
>LIC13189 wecD, acetyltransferase
MEKFKMNIKEASLLDLPEIAKLFDEYRQFYKQKSDLKGAEKFIEERILKQ
ESKIYLLMDGNTCCGFTQLYPIFTSLSMKRAWILNDLFVRLEHRKKGGGR
ALIEKTAELARETRAKYIQLSTAFDNRIAQKLYESIGFVKDEEFIYYTWV
V
>LIC12019 yoaA, ATP-dependent helicase
MNRSLEYFDKLSSLWDDFEPRKVQIQLSQKIEDSLYNGTHLIAEAGTGVG
KSLAYLIPAALISIETEEPVVISTETKSLQQQLLSKDIPMVSKILGIDLK
AEVAMGASNYVCKRKMNHVFRDGTFGPEMIPHLDSFNQWIQNTESGRKQE
FNGTASYDFWNRITREADNCLGRNCPNFSHSFYFLEREKWKRSNILIINH
HLLAAHIASDFKILPEFNRIILDEAHNFPDIIGSSFRREIRSQEIQKLLQ
QIWLPNKNSGVAVSIGSSPLKDLATQAGEALTIFFNALSGEVPLNFYSPQ
RIKRPLKLDRGKFAEILFEIVEILQKHLSKLSKDNEDITEKESALVLEML
AGRLNEIASSLETFRQVDDTNLVYWIEPPDQNSKEIYYKICMEPLSPDEI
IRDQFASRMQSIVFTSATLSTSGNDFKYFQKKIGNLNTSNLSVPSPFPYQ
KNALLYVPKEIRDPVADPDGYHADLAKQILWLVELTQGNTFVLFTSFKSL
KLVYDAIRPHTDLPLFSQSDLGPDGAKQMYLQTPNSVLFGVSTFWQGIDI
RGDKLKSVIIAKLPFQVPNDPVLETKSEKLKESGGNPFAELQLPYACTVL
KQGFGRLIRSGTDTGIVSILDPRMFTKTYGRDLLKSLPPAKLIQNREDLR
REFSNLPK


# Leptospira interrogans serovar lai str. 56601

>gid:4327    conserved hypothetical protein
MINYNLQTKVSEEVYHSTQNFLGIQKGDIQELIEIAKGTKRQRARICSHL
NGNELLQEMFIVHPKGVYVRPHKHIEKPESMMILEGEVDFVTFNDNGEIE
NTMSMGAYHTGKIFYDSMRSSTYHTLMIRSEWLVFLEITKGPFRKEDTIF
APWSPEENDAEKVREFMNKIEQRLK
>gid:7038    hypothetical protein
MRNKKSNLILISSNQKIIIVDDNQKYAQQLSSLLLSKKETIQISCAENIR
SGYKKILKGNFEVFFCDITIRKRLVGFYLVHRLRKRNDRIKIILMSTIFD
YRIFFILFYRIIKFSFALNGICRKSDVINGKLVIY
>gid:5638    Predicted transcriptional regulator
MNPAMEELEEGKESSSEHITEVVKENLKLIRHTKGFSLDKLASRCGVSRA
MLSQIEQGKSVPTISVLWKIANGLNVPFSELLKEKGTEGVIVMKAENTKV
LFSSSKVFSSRALFPYNGNRKTEFYELILKPGGIEVADSHSSGTTENIVV
VSGKLRLRVGEKVVELEPRDSVFFRADIPHEYSNPTDQETLMYLVMDYRD
EIN
>gid:6460    conserved hypothetical protein
MEENYSGKILISNSSIVMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIG
EVIQGIPDHVSRNSLIYSGGPVDPTFISVLHEDNKISQPGIEIIPGLYLA
RSFDTLLELLKSSSKFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFVL
NQDPETTWQEALRSKGGIYKYFVEHTKDPMLN
>gid:6783    cytochrome oxidase subunit IV
MELFLNYALYVIVSIGFLIPFTGFVIGAGTIIKATLVGFAVNFSSQVLEE
NKLQDFIERNKDNKLGKFLQEVVLKGQEKLKSSPTKEAHKEESHGSHHVI
SVKTYSLIFATLIFFTFVTVWVAGIDFGAMNVIIAMAVATAKASLVLGYF
MHLKYDTLMNRVIFGSGFFFLLLLFGFSAADIFTRFKVLLSFAF
>gid:3154    Transcriptional regulator, tetR family
MIRKKTTKQKETGKSQQTRSLLFKTAILSFQKEGYDETTMRTIAKKAGLA
VGASYYHFKTKEEIVLEFYRTTQEEANIQNIEFCKSNLDLKDRIKNIIRF
KLGQFIGYEKFLHVLSRSGGDPKHPLSPFSKETKQIREDAISIFRNAILD
SKNPFPSDLKEDLPLLFWLFQLGIIYVWLFDESTHKRKTELLIEKGLDLI
FQLLKLSSLPIFKSVRKSILSLVNLFKK
>gid:6264    two-component response regulator
MSPTPNYSSYTVLAVDDSEINLKLIVHTLQPFGFQIFTAESAADARNVLL
TNRVDVLLLDVSMPDQDGFSFCRELREIERFKLLPILFITGINREVGFDE
AISHGGDDFIQKPFQPKELIAKIRAFIRIKILQDELLEQKKNYERELIMA
RKVQQELLPEKELEWNGVSLSTIFQPLMQIGGDYTDAWIEDDSLHIFIAD
CSGHGPSAALLAAMLKMQVSSLSPDQSLQEKVQTLRHNLEKILPDEFSIT
FFYGILHKDLSFEYSNGGHPAPMLYQNGEVSILPGMGPLIIPIEINVKEE
FKSVQLQKDSYMLLYTDGATEISDKSMNILGEDKLKKIFQESVSIGGDIL
VSMMESILAHSDRGTNDDDIAMMVLKL
>gid:3929    putative regulation protein
MFVMTWIKRFSRFKSDFLNPFTFFEREFNYSEAQSWKDQTRIDQSFIRLA
FLLHFMMYSTLAIPEVRSSQRGGVYLGIIFLVNVMGLVLSFQERFLSWVI
HISNVIIIFLLMNLFHESFYHFRDLESLQIYNNYFLLISFIVIFQMFRLK
KGSCFLTGTVSICLHIFFVSIKRMELGLDDFPRILFVPDVVYVLCIVIGT
SSVIIVKRLISISSELDLEYKFIQQDLIVAKQVQENLFPGKLSIKGIRYE
VMRIAPNHIGGDFFDFVQLREGNTGIFLTDVAGHGIASALVASMVKIMVS
TMPYILKVHPSRLMDYIDDSLHKQFQSYHASAIYMFLDFISREVTFSNAG
HPYLIHGSFSKEFHEVETEGAILGFGIKKPIAEQVKFPLVEKDRFFLYTD
GLIENKNREGKLLGTEGLLEILNANRFEKDLSTFKANVQKTVEDFFGNVA
LEDDTLFLIVEVE
>gid:4506    hypothetical protein
MHVCQLKNAIRTIKNMEKFERLQKACNTLKINRKGLADILRIHPSNASRL
LGGETEFTWTYAELFQLKTNVSANWIMEGKGDFWSEESGNDKEKLIVRTI
LKIPGLSEIMEKFVKLHQEDQNAIIEIINRFYYLSMSKFKK
>gid:3040    predicted transcriptional regulator
MGSMFFKDSNFTKKNFLKNLFLVREPEIKFLKSSEQTKINISRKISEEEW
ESFFNRLTTARIEANLTQAQVAKSLGKYQSYISKIESGEKKLFMEDFVRL
YKLYNKSPKYFCSVFSK
>gid:5064    transcriptional regulator, ArsR family
MSKEKSALKKNQLESAIRGIKGIAHPDRLQILFFLSQKEHSVGELVDLLG
ISQSAASQHLSKMKINGILSSRKESNQVFYYLKDGKYKDLIRTIVKIYG
>gid:6747    Acetyltransferases
MEKFKMNIKEASLLDLPEIAKLFDEYRQFYKQKSDLKGAEKFIEERILKQ
ESKIYLLMDGSTCCGFTQLYPIFTSLSMKRAWILNDLFVRLEHRKKGGGR
ALIEKTAELARETRAKYIQLSTAFDNRIAQKLYESIGFVKDEEFIYYTWV
V
>gid:2732    transcriptional regulator, Fis family
MNSEEHIFIGNASNSIKIFNRLKSLSQSNLPLFVTGGPGSGKTFVSNLIA
SLSGTNPQIFIIDSDHHENQRSLESALSVKDNVYFLFKDFPNFPKENQAY
LLKRIRENQNNSRFVFISGKEWKQKLEAGQILESLYFEISNFRLDLPDLR
ERKEDIPLLIKHFLEILSDKYKRKEIRLSEKLYHILLNYDFPGNIRQLRN
LLESMISLFAVRILDVKHLPPQMFETSYVYSEFIEVKTGIPLRDYEREII
KKNLILVNGNREKAAKILGISERTIYRKIIEFGLSDEVEGKNLPSDV
>gid:4999    Transcriptional regulator, tetR family
MQKKIDIQHYFVHYKLSKKISRGNSMPKIVNHEKYKTEILAKCVDILARR
GYSAVSMREIAAELDVSTGTLYHYFATKEDIFKELVKFVLNKDIEELQIH
SKGDLGQTLETRIESLFQMVQAREAYFQNLLYIICDVSRLKNHEEEKSLI
ADTIKEYVHIITKHLGVTNPALNRILISVILGTVVQRILDSEAISLSETS
DVVKDFLSILLSNSFTF
>gid:3553    Transcriptional regulator, tetR family
MKTQPRKKKESGTGVRERILDTATSLFYKQGFSSTGMRQIIQESNSVAAS
LYDHYPSKKELGLAYLARQEEKTLSDLQSLMDRYPDLGEFLRAWVILKEK
QIRHGEFVGCPFAGFASQVMDSDPEYTEFLKDIVNKWIRMISDYLQKAIG
SGQLKRNMDIQYVARRILMAYHGSITMWRMTQELRFIREMDDSLREIVEE
YRIL
>gid:6359    Sigma factor sigB regulation protein rsbU
MIILVMISSPWQAGDGLRAYQGKIDLRGIQDPDFGMTKLNGEWEFSWLQG
PEKGIENHSVEFIGVPGSWTNESKSNQTYPKFGYGIYRLKVFLPEIWKKK
ILSVSLGAIASAYRIKINEQIIGECGTPGIDPDSIVSRIEPRDFLFFADE
DEVQIEIFVSNYTSTMPGILLPISIGPSDSAGVSKAIPLFFDIFSFSSLL
IMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRTSLINSKILMLFFPQIPW
SWVHKINHLTLSVGVPFFLLFFSSIFAPYVSRKFINVGVVFSILFSIVTL
FGDMTFNNQSISIYHYFIIIIICYLFYTILKIDFDKERNYTYILYGSGIL
FIAVLVDLFYARVLKTGSIQTSHYALVFFVFLQSLLLASERSRKFAETRE
LALNLRTSNLELFEMKEQLVQKIEDRTRVLNDNIIQINRELEIAQNVQRK
ILTPLDRNIPGIRFYYEYKPLEKVGGDFLDISEISSGKTRVLIADAVGHG
VQASLMTMALKTEYEELKNLENPAQVLKELNFRFLKKFDSLESIFPCMIG
DIDTEKEEFTYASAGHPDQILQLPGEFPSLLQKTGPILGLFESLEIVSKT
IIFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKTLHEGRESELKNL
IQEIIKIEELTRGENPRYDDITVIAVEFYSVKRS
>gid:3544    two-component response regulator transcriptional regulator protein
MVLQKISTTTKSNYSVSIVEDNPHTALNLQELLSKSNEFKFLEHYPNSHK
AIEKIPLNIPDIVILDIGLPEKSGLECLKELKEKTPNTKYVIFTVFEDEE
KIVEAIQEGASGYLLKDTSPELFLAELKVIVLGGAPLTPRIADKIIRKFT
KKEESKNQPIQNTLGLTKRKLQILNFIALGMTVSDIADELDISSHTVSRH
IEKIYKKMEVHSKSEAIIRGRRMGIIQDIPGYP
>gid:3987    conserved hypothetical protein
MERDRTAIKGLIEALLFVSGEPLKLASIAKSAEIEKTEAREILDELILDY
SEKNGGFLLKEIAGAYQFVTNEGFAELLGNIFKEKRREQLSKSSLDTLAI
IAYKQPITLPEIDEIRGVSSRAMVTSLISKKLIKPVGNKEVPGRPALYGT
TKEFLIHFGLNKLSDLPAPVEVKELKFENLDDLLEDE
>gid:4551    predicted transcriptional regulator, copG family
MISLRLPPELERKLNSFAKSEGKSRSEIVKDSILEYIKNHGKTKTPFELG
EDLFGKHTSDVSDLAQNRKKYLHQSVKGKNAKRSSN
>gid:6577    Transcription regulator
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASVTGINNQKDLKEQLGELFF
LGTTPHVADLIQVDYDSETDTFGLILPFRFDSSLRLSIREWLTLRKILEE
VVEASSDPKTNSTARKILQKIISIVPIAGQEALSVYKTNIQNAIQNEKSL
ILEYQSRMGEKSTLRKVDPWFLFHSLEDYLLGYCHERKAPRNFRLDNILS
LKIGSDPILQPAGQKKSDYIREFEEFRKSWENSSGIAEIWHTREVFYNLN
RKLDLERTEKTQKLDNVVYHLSKAKIREENWFLETILPFGKNVILERPTH
LAKRILRELESILH
>gid:4096    conserved hypothetical protein
MTDWFCRLEWNWDGASLESKESSKKKSGWLLYIAAGILLFSALIFLISKF
NRTGLEEKIAAGKPIYFLFHAVNDSQEYEFGLLATLFPSNNRCALYFIHP
ITSFDDPDDSLDLLKSGAKSSVKSAITDLIDTKPNYTISISSSQWIRIVD
LLGGLDVYTDNKTVRSSSEYNREPGVYTMSGQDVYDYTSKIDKKETLDYL
ERISRQESVVLTLYEALSQKKEFLTTPLLIFAHSLIESDLSKEDFVSLIK
FVNSRRIQFGISELPGEPMNDPKTKKLYLKTDIARARIAFRKFSKDMNSD
VFTDAEFARTEVLNGTEVAGLAKDVRGILSDKRIKVLAADNAWKKGFPKT
VVIDRSGNTAIMDRISTVLEKAEVHHVLRKDLGLDATVVVGSDYEPRK
>gid:3820    transcriptional regulator, ArsR family
MLYYNNMLKLDKQDSVFKALSDPKRREILDLLSIKPKTTGEICSHFKSLD
RCTVMQHLKVLEHAGLLIVKKVGRIRWNYLDHVPIQEIYDRWISKYAQPS
LEKLTRWKNELESIID
>gid:6597    Transcriptional regulator, tetR family
MKMKVMDQDEVKHRIMDKALELFLKYGYAKTKMEEIARVLKISRKTLYKH
FENKNHLLFEILSHKHNLMSSTLEKISEDDSLSVHEKIQAINEFKISQFP
TGANEFILEIRDQAPDHYAYIKEVRMESVAKSVQALVKQGIEKGEIRKDL
NPTIFAALLNSAIEMTATPELLLNYSPYSMMQLQGEIHGILFYGIMNSSE
TQSVEKVSSD
>gid:5533    Transcriptional regulator, tetR family
MAKDTRDLILKTSLKLFSEQGYHGTTMRQVASKAGISLGLAYRYFDSKEA
ILEGIIESHDKILKRYIPDEIVTNPRREDLIVNVSESLISLVKENEDYLR
LYWNLMLQPKIHRLKRRNIHLVNMIFFETSKKTIRSVKPNYSEFEIKNLA
STTIGYMINYLTNKKEFSLDDFRNYLLFTLKNT
>gid:4570    hypothetical protein
MSTLFERLSAIDDDLKLSHSRMAVELGVDRSTYYKYKNGTLAIPKSILII
LRLKGYNDHWVLSGKGQMKLKDSAQLVEMQKRLKLISKLDSYGVLDSIEK
LPETPSSVQKKIIQEFFVFLASKFV
>gid:4472    Transcriptional regulator, marR family
MQLQLKNYILFLMNEKLSEQSIQAWAAGLKFYSSASSQIESALAKTNAIS
LTWYDILYTVYTKSKKRSRMSDIAREIILSKSALTRSVDKLVTEGFLKRE
KSEEDAREFIVEITFSGIQALRNSWPIYEEGIREIFASKLTFKETSELLR
IFRKLNKY
>gid:6822    two-component response regulator
MKVLVLDSGTTVRKIISSFFPTEDFQIFEAGTAKEGLDLTFQEHFDLITI
GMVLPDSDGFTVCKTIRNGLIDNKQNICKNSKIFLITSGNIETNRIKSVE
SGFDGIFPKPTGIEEFKTVIEEIIKLAYQSSPIESKKAGKILIIDDSELN
LLLLGKILEKNGYSFQAFTEGKKAYEYLQSSNEVSYILTDWIMPDFSGEE
LVEAIRKQEKFNDIPIAVITGIEEKEDFKISIPQKNIYLLQKPYFERKIL
EYIQKV
>gid:2759    VacB protein
MNIKKKQTTENKSVKSNRKKKTFDKTKKERTDGFRENEIGKKILKYIQSR
AGSVIQFKDLNAKILREENQNSYGKKREKWEFQEKEREILETLKILETEG
LIELEKKNIIINSNQKLQGTISISKKGDGFVKLSSGVEIFVPNQYTQSAI
QGDLVEVRPYGVGKKRRLEGEVTEILRRGRDLYRMIVTEKEPKFIFGKLL
DIDGEEKEGYLLRKTILTDLQEEIQSGDVLIVKLKEETEHEKNLYEVQFL
RFESDTKEDLDLMRMLMKYNYNILYPENIILDLPEEVNESTVDDWNERVD
LRNLKCITIDGEYSKDFDDAISFIEEKNRIRFYVHIADVSYYVRPGNDLD
EEAYNRATSVYLGSRVVPMLPPELSESLCSLIAGKNRLAFTVEMEADWKG
KITHAKYYKSIINVKERYTYNKAESEILSGDSDNWIFRMNEFAKILRTKR
IEDGRVDLNLKENKVVTDSEHNVIEIAVQDRLQSHILIEEFMLSANIKVA
EYIRKKKHPTLYRVHEAMNEEKIESLNAFLQLNATKILLKDSSYESIRSV
LKELEAKPAERLFNMFLLRTFMQAYYSGEHLGHWGLGFEDYCHFTSPIRR
YPDLVCHRVLQNILLGKKPIYTPEEIVTFGLHCSHQERKASDAERDYYKL
KACRYLEKTGIKEFSATITGCRPHLIFVDLENPAVDACLFSSEFTDEGEI
RLETDFSFYSKKYSKIYTLGDKIEVELDRIDYEEIKIFVKMKKFQKKV
>gid:7055    Transcriptional regulator, marR family
MGKTAKDLFLENQVCFPLYACSRALTAIYRPILEELGITYPQYLVLLILW
KEDGCSVKEIGKKLYLDSGTLTPLLKRLEDSEFVIRKRSIEDERSVEIYL
SAKGKKLRDKAVCVPSKLIESLEIDKKSLIDLKKDLDRLLLTLSEKVE
>gid:4508    hypothetical protein
MSLVIQKTKPINKFHVMRLSGLENQEELNHVKKFASKIFNNFGYTKSLYT
AVDMDAWSTWFYVREGSEILAAMRIVEKKPNNLIPLELGIIKDTEPYQRY
AVIGDNIADWNSVSFVLSIKGSWAALATFQAAAQYCIDKNFDMVYGFYHK
NVSSIVKLYTSIGAVTSKKYTKEVYFPECYYNNEPVYLTPIEIPKVALQK
IRTRLW
>gid:2973    Transcriptional regulators
MCYFLKQSFNGSYHTYLAAKKKNSEIEHKVGDYVVYPIHGVGEILEISKK
NILGKKKDCYVLEIQGSKMKVMIPVDKAEQVRIRPIIDKKEIKKVIALLK
KDEVDTEEDWKIRYQNNLNKIKSGSIYEVGEVCRNLFRRASGKELSIMER
KLYESAYNLVKMEVALSKGVTQEEAGNLVSDVLASTLSPSEKKAEEE
>gid:6465    hypothetical protein
MRVMKKMSQEKVGQLTHLNYDHIGWYKQGNSKSFTDKLKKSLRKFSE
>gid:6281    transcriptional regulator, ArsR family
MVQQETDSLSLTFAALADPTRRKILATLRYGEVTVKQLAEPFAISLPAIT
KHLKVLEKAGLISRGREAQWRPSRLEAGPLKEAADWIDEYRQMWEARLDR
LDEYLRELQQKESQHKRKTDHESGKN
>gid:4609    ATP-dependent DNA helicase
MNRSLEYFDKLSSLWDDFEPRKVQIQLSQKIEDSLYNGTHLIAEAGTGVG
KSLAYLIPAALISIETEEPVVISTETKSLQQQLLSKDIPMVSKILGIDLK
AEVAMGASNYVCKRKMNHVFRDGTFGPEMIPHLDSFNQWIQTTESGRKQE
FNGTASYDFWNRITREADNCLGRNCPNFSHSFYFLEREKWKRSNILIINH
HLLAAHIASDFKILPEFNRIILDEAHNFPDIIGSSFRREIRSQEIQKLLQ
QIWLPNKNSGVAVSIGSSPLKDLATQAGEALTIFFNALSGEVPLNFYSPQ
RIKRPLKLDRGKFAEILFEIVEILQKHLSKLSKDNEDITEKESALVLEML
AGRLNEIASSLETFRQVDDTNLVYWIEPPDQNSKEIYYKICMEPLSPDEI
IRDQFASRMQSIVFTSATLSTSGNDFKYFQKKIGNLNTSNLSVPSPFPYQ
KNALLYVPKEIRDPVADPDGYHADLAKQILWLVELTQGNTFVLFTSFKSL
KLVYDAIRPHTDLPLFSQSDLGPDGAKQMYLQTPNSVLFGVSTFWQGIDI
RGDKLKSVIIAKLPFQVPNDPVLETKSEKLKESGGNPFVELQLPYACTVL
KQGFGRLIRSGTDTGIVSILDPRMFTKTYGRDLLKSLPPAKLIQNREDLR
REFSNLPK
>gid:3267    conserved hypothetical protein
MNVNSEKDRILFRKITSSAKSTTNRFGVIQYEFILSFYWIYVYPENFYYF
PENDSILVLHLDKKVLWIYDILCRDSFSISKFLLDWNLEDIEEIRFGFCP
DRFDLLNLEIKNDIITQTDSPLFVKGFQSALKSTFLFPMLARA
>gid:6792    ATP-dependent RNA helicase
MEEVLQLSLDFEPKSSSGYRGDFCYLTNSPESGIGKIVSSAEGKFTIEFS
VSQTKKTVSENSTYLRILPGYPSSLRNVEEYSSLMNLALTAYELKLTHAF
DKLSALSNSRTRLLPHQIESTYIVVNSLRPRFILADEVGLGKTIEAALVM
KELIFRRGYKKVLIVAPSPLLVQWQQELKNKFNEDFKIVKRKNFHTDGEK
NWRNFQHVITSIDFIKNPKYAEEILKTKWDIVIFDEAHRLRRDYHKITRA
YLFAEKISKKCECLLLLTATPFRGKLEELYYLMHLIDPNILGPYHTFVND
YILGNKADLKDKISKVLLRRRKVEVGGFTKRFAKTVRIELSSVEREFYEE
TTNYVRREYNLAMRTQNRAIGFVMIVFQKLLDSSVFALLSALTKRKFLLE
NKFHHIQKMESNLEEWDLDETEDVEEFVSGLDESVQLDLQSLKRELLSLN
RLILLGKKIKEDKKSIKLKETILKLQKEGHSKFIIFTQFRTTQDFLASVL
SDFQVTLFHGSLSADAKEKAIVEFKTKTEILICTEAGGEGRNLQFANVLF
NYDLPWSPLKIEQRIGRIHRFGQKDNVFIFNFASKDTVAERILEVLTNKI
RLFEESIGSSDELLGAIEDELDFNSSFMKFVTGNKSKTEMEEEIDNRIKI
AKKGFEKLGALVTPKLIDFNLQDYYSHTLEERSFNNTHLEEFVSRFTKIF
PEEAGFQLLRKKPQIYEIDSPQYKGKYGTFDSELALQNDSLEFLAFGHPL
IDKTVSYLIQNQKGWSTAFHSVSNKEYYVFLVEFQFTLNRTELFYFETNP
NTGSVKQIETLPEELREYNYSVRPSDISSHPELPSRLEENLIRTFISLDE
IVESRKKELGDQTLDLFQKEEFKIRTSNQNTLRQLEEKLMRQEAAFKWEG
KPEKKSAMNRTRNEIQKVKEDFDRELRKVRNGKTIQHRFQLFQVYLPS
>gid:4614    Predicted transcriptional regulator
MKNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQACVK
YLKTTLEKLFNEEPVEDVYPEFTEGLTNKLWAKRRELGIKQYDMAKKLKV
STPFLSKVELGLLEPPEDFKNMASKALKMKKEELFLQKVEY
>gid:5377    Probable chromosome partitioning protein parB
MKIRVSDIKVKNRIRKDLGDLQPLKESIQKLGLLHPILIDLENTLISGER
RLESVKILGWEYVDVRIVDIRNKKERVQMEAEENNIRLEFTSEEQERVRE
LLKRYSYTTVFGRIFAWILDLLDWLKRFFQKK
>gid:5419    conserved hypothetical protein
MFFGLENCFFILIKESQKIKLKKIQYSFLRFVKMKDNKLWLLKSFSIVSF
FAKMFSNFYRMFFGVLSKHFLFYFLIIFSVSSESIQKIQSLDEIVSLDST
KEHGWEITLQKIDPVAFSDSYLKGQKNSNIQLEAYEAPGVYILPEESIQT
AFIVKKFIAPKNWKGSGLAVRLGTLTDKDKTYLNGTLIGETGDMNSTLPQ
AYDKIRIYQIPNGLIRKDEVNILVIEVKKYFQKEIGIEQDKTAIGDSLLI
QKELLETEYIKILLLMIYTTAGVYFLFLYLRRRADRENLYYGLFTILLVL
YQFLRNQIKYDLGIEFIYMKKLEYMVLATLVPLFANFIRLYFKYPKTTIL
KVLDGLYVSFAIFYFFSNNVEHYNFINKNLVQYGWILYLGITLNHLIRRV
IAKDRDAFLILIGVLITVFAAILDTLGARNVFVFPRLVGYSFLFFILSIA
TILANKFVRLNEEVEELNLGLEKKVEQRTEELRLSLEQVNRLKVQQDADY
FLTSLLINPLSSNKNTSEVIKTEFYTKQKKSFEFKNRTYEIGGDILISGN
VKLCGKKYVVFVNGDAMGKSIQGAGGALVLGTVFNTILTRSSISLYQNKQ
PEKWLEEAFLELQKIFESFDGSMYISIVLGLVEENTGLLYYINAEHPWTV
LYRNGVACYIEEELTLRKIGIPENEEHLVIKNFQMLPGDTIVIGSDGRDD
LLVGKEGNRVVNEDQNQFLKRVEEGNADLRKVYEEIIKFGVILDDLSLLK
VTYNPEDSKTKE
>gid:7016    transcriptional regulator, ArsR family
MLYFLYMNAFAALADDTRREIVRLVAKNGKLTSTEISQNFKMTPPAISQH
LKVLKEAKVLHMKKEAQRRIYSLNNSGIDEMEDWLLDIKNLWNKRLDNLD
KYLLKIKKEKSHDKKLR
>gid:4992    Regulatory SIR2 family protein
MKEFITKHRDKFQKISAISGAGISAESGIPTFRGSEGLWKNFRAEDLATP
QAFSKNPKLVWEWYLWRRNIIETKRPNPGHFALVELERIHPDFFLITQNV
DGLHSQAGSKKLTEIHGNIFINRCISCGQESKETISENTTPLPPQCQNCN
SFLRPGVVWFGESYDDFKLNLSIQRMKHTDLLLVLGTSGSVSMPVYLAQI
AKDSGALLIEINPERSSFSSSVDLFLQGKTGEVLPELIREILDNPS
>gid:3779    hypothetical protein
MNFEYIESIMNKMISEVVGMGQSIPLILADQAVLPSSCPYGTYKVIQLVQ
DPISNASRSIQKLDPTNFKEIIRINQSVLINITFLHDSSIAVCWELSEKS
MDWFDSKEGTIECDKFGITPVLISPNIQDKTVLTESGIYIYKVSFDVLLK
LRKYNEQPGESTASAPTVEYQEEA
>gid:3561    predicted transcriptional regulator
MLLVVDVGNTNTVFGIFENGNKIPLFHKRTVTRKDRTSDELGLFFRGFLR
EFKIENEMITGGIYSSVVPTLNPILDRMFQDWFKIEAIRVHYQMKLPFSI
SYPRPYEIGADRLVNAATCAIDFPGKSIIIDLGTATTFCVVNEKPEYLGG
VIAPGLKVSMDALTRNTSQLPPIVFQSPGKILGDSTIESIQAGFFFGWIG
LLEGIIREIKKDKGQDYQVIGTGGLVTVIDAAHPGIFDKIDPLLTLRGLQ
ILHLMNS
>gid:3169    Probable RNA polymerase ECF-type sigma factor
MAHTSELEKLYNHNKDDLFHYIRKSFYDENSAQDILHDSFLNFFKYYENR
DIPDPTSCRMILFRIARNLIINHSKSYYQRNVSLVGEDAGSSFTSKSPSP
EFSVMEKIDQLDVKNIIDSLLDTISTEYKEALLLRYQQDLKLDEISKILG
MSISGVSRLIERAEKALAQEGKKIGFQPADYI
>gid:5651    transcription regulator
MRADRLLSILLQLQAKGRISSRDLAKKLEVSERTIHRDMEALSASGIPVF
AERGSKGGWELSEGYRTNLTGMKKEEIFSMILTSSTRIASDLGRKKDLDS
ALMKFMASLPPAYQKEAEMVRQRIYVDGAGWSCSEEELPFLSLIQEAVWQ
GKKIVLRYKTDEESKKRNVSPLGLVAKGKIWYLVAKYEKEFRTFRVSRIV
EAKLGDSFERPKRFDLEKYWKDSTQNFLSKIPSYPVRFKIHVSKIDFLKN
ILYIRILKYSKITKDWIEVTADLETREWALHHILGLGDSVVLWEPEELRE
SILISVRKILDSYSKNL
>gid:4861    putative sigma-B regulator
MNLKDYIKSYFQRVGWIPPIINLVCFIAPIVFLQNSSFSEKEKILLYLGI
IGFIYLVNYISFIFFLTKKILPEEEIRSKMRKRYRKGDDRMQSYLFPLPL
DDENYEIYGRTLTYNPIGGDFYNFLTDPQGNYWIGIGDSVGHGYLAGIFS
MMIFQNMSLLVKHNLSPYEVIEQINEDLLKRTEQNPKINPNLYATFLLIK
IDKEGNLEHSGLHPSFVIHQKKTRKNKIIETDGKFVSITMNSTLKNVQGK
SKFQLETGDIVFCFTDGLYEQKNNGNLYFGESLFQFLDEIPKNDLTKIAD
VLFTEILKHTGGKLQDDMTILMIRKK
>gid:3157    conserved hypothetical protein
MMTKEESIETKGITPAMFHILLSLAEGPQHGYGIGKSVEISSEGNFHLGP
GTLYRTLELIRGFGWVRYSKKKVMENDDPRRLYYEITSDGKEILVYELKK
METTLKRAKKLKLLGN
>gid:5024    putative outermembrane protein
MRIFALLFCLFLISTAELFAQLPDETPTPNRRQPTNTTQQAINLLEGFAE
SSWGESYANLREKFLSLSTNPQNDEKVEIVYEDKEKTLLIRRNGILYSYR
FYSTPKIVTESRPKDQRQPTTENKSEIEEENHSAPGVLFSVGVLFRYLPG
KEVQQKLEQKYGKPKKESLAENKIGGAVLWEKTDEKQSPPRGGYVVQWKE
AYKKMPFTRRVDYFSSSIKFQIEKEYKEFFNAEEIKTLRDLIP
>gid:6185    ATP-dependent RNA helicase
MKFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTG
KTVAFLIPVIHNILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGI
RSVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMIKSGSIDISNVEFFV
LDEADRMLDMGFIQDIRWLLHKCKNRKQTLLYSATLSVEVMRLAYRFLNE
PVEIQINPEKIITERIDQKIVHLGREEKIPYMTNLIINSKEEGQGIIFTN
YKANIPKIVYTLRKYGVPVTGISSELDQKKRLRLLRDFKSGKYRYMVATD
VASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRKGKAIGFCSESD
YVELEKIEKYLKQKIEILEVNEEYIQFPAGDFQSFIGGDSYDREKETHFK
QNGKRPHDNDRAPHKHDRNRKRDKRHTSHTHSTAKDSHKKKPAAAIQEAE
LFLQKADSVLSSEPKGKKSAKDQHRFQNKDKQSRTGRGAQNSRNQNKNQQ
FGKQYDKNKRNLFDINDTVKEDTKKKKVSIWQKIKSIFGG
>gid:6806    ATP-dependent RNA helicase
MKGTSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDII
GHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKL
IKYKGNFEVVPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHL
DEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFSATMTDDVLTL
MKKFQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARLIEYRNVKL
ALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMSGFRKGSIE
ILVATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFS
FIVGKQIYNLKKIERINGIKIEAGKIPTLDDLEETKIHSYTSKVRSIVDA
GHIGKYVNQVEKLMGDDYTALDIAAALFKMTILKDSVTFDDSVQFESDFK
YEEKHSTKKKSGGGRYRDRNFGRSGSGSRSKSNSNSHFGNNSKDGSRSKF
SKGDKNQKQGGGATSFKKKKK
>gid:6407    two-component response regulator
MKVAPTYSILLAEDDESNAELLIRHLERYNFDVDHVVDGVAAEIKLRKIR
YDLILTDNRMPKLSGLDLLERIPDMNRMTPIIFLTVSNEKETIIQAAHNK
KLVAYLLKPIDTHVLIEKICQALGIKTNSLIDKKEYPFEILPFTHTDKGV
GVGIELKGCPYGKSIEKLVQEIAFFLKELPSLRSILIKVNPEFFYFKSGT
QLLSSLKDRLAIKYEISKEDITIQTEH
>gid:3181    Transcriptional regulator, tetR family
MTVTRHKRRSRNSLNRENIVQVAMEILQEKGIDGLSMRKIAEKLNCSVAS
PYSHFTSQEEIIQVLIAKGETELTQLLRNAQKNGKNAFEQLAGIARAYWD
FSLNNKELHKVMFNTVHGHMHRKAFPSLPTSYRVFLETIRNGCINQEFKL
PKSEYPAIARMMWAWMYGLMVLDLTNMLKRRRGGKDDPLAEGFLYFQKIL
LEE
>gid:4868    DNA repair helicase
MSKPLIVQSDRTMLLEVDNPEFEACQSVVSKFAELEKSPEYLHTYRISPL
SLWNAASIKMSADEIVECLEKFSRYSVPKNIVNEIREQISRYGKVKLVKE
ESGELAILSNEKGFLQEIGNHRAVQPFIESTFPDKIYIKKEYRGHIKQAL
IKIGFPVEDLAGYDEGNKYGFNLRPTSISGKKFGMRDYQRACVEVFHAGG
GNEGGSGVVVLPCGAGKTIVGIGVMQIVGAETLILVTNTLSIRQWRNEIL
DKTDIPPEDIGEYSGEVKEIRPITIATYNILTHRKKKGGDFTHFHLFGAN
NWGLIVYDEVHLLPAPVFRMTSELQAKRRLGLTATLVREDGLEEDVFSLI
GPKKYDVPWKELESKSWIAEAKCKEIRVNMEDDLRLKYSIADDREKFRLA
SENPEKMKAIGLIMKKHSESHLLVIGQYINQLEEISKKFNIPLITGKTPL
PERQTLYDAFRSGKIKSLVVSKVANFSIDLPDANIAIQVSGTFGSRQEEA
QRLGRILRPKGHDNTAVFYSLISRDTNEERFGQNRQLFLTEQGYEYEIYT
LDQFREAQEELAQLQLNNV
>gid:6173    hypothetical protein
MGTKKWYALQTYSGHENKVQKNIEKLIQQKKLEEKIFQVKIPTMDVAEMK
NGKKKVTKRKLMPGYVLIEMEMDDDTRFLIQSLPSVSTFVGSKDGGPEPL
SLEEVKNLFSESGDVASEEPVAPKILFKVGDSLKIIDGPFANFTGLVDEI
FPDKGRLRVKVEIFGRSTPVELDYLQVKTEN
>gid:3248    Transcriptional regulator, marR family
MGTHYKGNSRETAVLNAFIKLSRCSDSIRQLEEKVFSKYGLTTGQFGCLE
TLLHLGPMCQKEIGQKLFSCEGNITQIVDNLEKRKLVQRVRSEEDRRYII
IHLTSEGKKLIQKAFPDLLNSLVHKFGNLSENQLLDLGDFCKEIGLKTI
>gid:5255    transcription-repair coupling factor
MKDLLNMIGDGVFSRFESSLKKKNSTSKIKSSFADSSNLKTQSNLTLKTQ
SASASEKKISVNTEVVGSVYSVTTGSHSILASSLFQKLNQTILVVSENNT
SAEFLFREALSFLPSNDLIYLPGQEVLPYEYMRYPSEMKRERIKAIAKIL
SGEPVLIFTSVSGFLKTLPPIQTMQGRAIVLKKGKEIDLESLLIQLIDLG
YKRVQVCETFGEFSLKGGILDIFSSYSTEPVRIDLFGEEIESIRTFDPDS
QRSMTDLDQAVLLPADEYILSEEQKKEYQNFLKSSDSSLHLPEIPEGNYG
IYYEELIPLVRENHGILSYFSEPPILIFPSANSVKERLFHLEKEYLSLFE
KRSREVLCAPPEKLLSFGEEFKVLSESIGLSFVGLPPRNENDLVSLLKEA
PSFKGKIREVREKISELRAKGGWKIVLTSSFEAQTKRLQGLFEKEGVILL
NEDSTEPLPFHLGNHKSDTFLVLSELRNGFILENQKILILSENDIFGREY
KRKTRFKKQNSKALQSFIDLKEGDYVVHIHHGVGKFLKIERTSAGGKERD
FLKLEYSGGDSLFVPLDQISLVQRYIGGTESPRLDSLGKSTWKKTKDRVQ
KAVEALAEDLVQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEA
IEAVKKDLESSRPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPT
TILALQHYNTFKNRFENYPVRVELVSRFKTPAEIRDILADFSAGKVDMVV
GTHAILSSKLKPKNLGLLIIDEEQRFGVNHKETIKKFKNLVDVLTLTATP
IPRTLHMALTGIRELSIIATPPKNRQSVETYVLEEDDDLISDAIRNEIQR
GGQVFYLYNRVETIEEETNYLSKLVPEVSIGILHGQMTEDEIEETLLDFY
NRKYDILVTTTIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDR
KAFAYMLLPKDRVVTEQAEKRLNTIFEYQELGSGFKVAMRDLEIRGAGNL
LGKEQSGDIMEVGFDLYVRMLEDAIARIKGEEIVVEVRTSVTLNTNFFIP
ETYISDTRQKIEFYKKLEGARDLDEIEEIYSEMLDRFGEPPEDAKTFILL
EKIRTLASNLGFEFVTEMKDEIKMKSGSYFRGDHTKIIQLISARTGLTLN
PKEPNVLIFQTEKKLEKEKLDTLIFLLSEMLPSKKV
>gid:3774    hypothetical protein
MAGKITHLEVLSQICKHLDHGTADQRKIAVLMRAESNRKFANIGAIAPDI
FYFYHIFSPHKTKKATKWGDMSHHNSVAELVLSFLDLILQTEEGIHRDRY
IAFTLGYICHCVVDIVTHPYIFYISGDFYNKDKKISSLAQYNHMRVENAL
DSWLLDYRWGMTPKEYDFVHHVDAIFKSEKKIWKMDPMLWHFWLRGLKST
FSEEFKKYYIGSEDKIIPGDLLNESFLGYLEFHKLMDSRSRWVRGTLKFL
DQITFHKVRSSVLMLPLKEHIDKRIMNEEKKKWNYPADPSIVREDSFVEL
INSSAQNGKEALTHAWNYLENKMSRSAFLKEYQGYNLDTGLRFQGVDSMK
EFSPLEEV
>gid:6887    probable luxR familytranscriptional regulator
MKFWFPQERRFYFFSMYIFLILLWIIEEVLTFAFDINWIERSQAYFTTIE
AAFGLLSIIGIYFLFQEIRNTKTDIESAKIMIEGLKNKNQFLVQTNQSFW
ESLQRQLEEWDLSDKEKEIALLLLRGMSNHQIAAIRGKSLKTIENQTFSI
YQKSGTTGKLEFIAYFISPLLPEED
>gid:5589    Predicted transcriptional regulator
MFKSLHSREAKIFCKNLIAARKDAHLTQLEVANRLGEPQSYISKIESGER
RLDVVEFWRIFKILGKSLEFYFQFDDKHDGFEKKSKTIKAASSRRKKK
>gid:4237    Acetyltransferases
MPKSKTNSKKFQIANLLPEHREASIELVNQFFRLINSLQLDGIFKIRPRA
GTKMIDVYLKLKGTGKVLLLGGFLGDELVSLLIARTEDKPYLEEQKTLFI
DLAVTKRGKQKSGYMKPLVLACESWAKDQEFKSIELRAIVENENAVSFWK
AMGYDPFYIRFRKSFKMDSI
>gid:4004    Predicted transcriptional regulator
MTKSIFKVVIKRAFITYFSKFIKKDLYLKIESTLSMANKIITIPLENIDF
SSPGKRLRYAIKNILAMNDEDFATSIGKSQNYISYICNDKRPLLDKLAAD
IETTHGISGLWLIKGQGSPEVNSSLNENSGTVKKMKKRDYLWNKISNDKA
EDILISFYDDIPNETRSLIYQMIVAVSKNSRYS
>gid:4170    ROK family protein
MKSFLGIDIGAGSIKASLIDSNGNVLKSSFRKTGAETNEKQFLDSICDIV
SEMKNSSLTAVGIGSPGPIDSENGILIESANLPLLKNVTLVSHLKEKFSI
PVYYNNDANLAALGEYHFGLGKGSPNLVILTLGTGLGGGWVYQGKLFNGY
KGSGMEAGHVTYLPNGSLCGCGQRGCTEAYFSASGFLNRYKEKTGEVLDS
AEEFFEKTRKGDKTASILLNEGIDALAQLCRNLIHTINPEKIVFTGGLVK
SWDLFGDSLQNRIRELIFPIFRTYTQILPGGNVSGTLGAAALCMENLE
>gid:4803    putative outermembrane protein
MKLQKLFLAVLIAISTAVFSQQNSGSDQKSQPSSAQLGQSILETERKLDE
KIFELNQRLTRHTVLMKMKVRVLPFRTVLFKGKANNDECTPAINQEDPAN
NCIRVEVYDFIRDEERGLNKNVQGALAKYMEIYFEGQNSNDPEPRTEPPR
NINKLKSKIYKNNMVLEDKIISEVMDRGPNTQPSHNDKVEVFFQKDNYPE
YGRPETPAEKGVGKYILAGVENTKTHPIRNSFKKEFYIKHLDQFDRLFTK
IFDYNDQLGNENYKENVDALKDSLRY
>gid:5694    two-component hybrid sensor and regulator
MTPMRILFLDDEEMIRDLFREIFGTIHDLTLIGSAEEALEVCKDKSFDLI
ITDVRLPKMSGIDFISRLRDKEINTPFIVITGNQDIEISIRALRLGAVDF
FIKPFRMDAIRHSLQKFESLFISSQELISKNHFQLTHSKQNFAIKPSLKN
LNQYVNLVMRSISLTPGIHTDDILSIKLALYELLGNAIEHGFAGISYEHK
ASLLSSDVDYVDHVDKICADINECVLLEIGFEDQKVYVSLKDRGAGFDPS
KVPDPVTDPNASYLSGRGIFLARMNVDELVYNDIGNEVSFSKTLKRANSK
VNAS
>gid:4840    RNA polymerase sigma-70 factor, ECF subfamily
MSAKKEIWEECSTLIRKTREGDQISFEKFLRLVTGILRSYLSPRISNEED
REDLIQEILIGLYKAWDSYREDRHPAPWIFAIARYKTIDYLRKKKSGDRV
FATDNLEFFASPEPIEEEPEKAREILKKWLDVLDERQKQILTHLKLDGMS
VREVSEKTGLSESNVKVITHRAVQKIRKHFSLDL
>gid:4310    Transcriptional regulator, marR family
MDDALRHKLLRILEENPEVNQREISEILGISLGKVNYCLKALMDKGWIKA
RNFKNSKHKLAYAYFLTPSGIEEKARITVRYLKLKMQEYEEIQKEIEELK
KEIGEQ
>gid:2917    hypothetical protein
MKQEVLTTIAEKNPILSRDNLDPIVLSDIEEKMIVQIAEYVREQFTTFDW
RWDDHSEMHDKTVTSLFLVKNDILQICGKNQSKTQEFIRILEYILEEEFD
E
>gid:2919    Predicted transcriptional regulator
MSRINTIKMYKSDKKFPDRLKKLIEILGLSQAEFARSIDLKPAFISDLIN
QRAKSFSQESLLKLRVAHNVNPLWLISGEGQMLITELEIKTDLETDHYRS
LLRKIKTRPQIEVLLESLMEVSDSELEALRVVIEKFRKKK
>gid:4748    two-component response regulator
MGQKSSFPKNEIDFLFSWMRTILLTEDEPGIRDTIQIVLESEGFKMIYAM
TGKECISLLKESPDLLVLDVGLPDGSGFEILKELRKKNSIPVILLTARES
ELDRVLGLELGADDYMVKPFSPRELVARIKAVLRRYDGNSEKKQTEFLTD
EDRKIIYYYGKSLSLTPYEYKTLLLFLKRPGKIFTREEIMDRVWTEPEES
FDRAVDTVIKNIRFRLKEIRPDLDPIETKRGQGYGLKDTL
>gid:4541    hypothetical protein
MSMKRSDKFKMKKIKKKISKRISPKKSIQKKKSFSKQSSTKNDLDQIVKF
VSLKRLKPNIKNDFDPLSKEEYQNLKQNMIANGILDPLT
>gid:6391    probable acetyltransferase
MQAKVVEITENYVNLLKTLSNLMGTSIINYKSFDFYSNPASNWFTRIVLK
GNLQSEDLLLEIEDLRLKGFDPYILDFLNTRAHEVFIYELGYNSCDEQIG
MFLEGDAISFNKKLNTNLNIQKIELEKDLKIWLKILNDSFESEDRLSLYS
KLLNIESFRLYGGFVNGQMTTTGMTFYDGESFGLYSITTDRNYRGLGYAS
NIVEHILGEIREVFSGFIILHATQAGKKIYEKFGFENSILLRHWGKL
>gid:3099    conserved hypothetical protein
MTGLKLRIAILILSVLSFFYYRFIPYFPDGIYYKNRMNSAFTNLNEELRH
LETGLGQINSISELENLQLEFPIVSGLKFVTESDLSSRKDPEGKLLKETL
KDGTSRLFFLKPSLVFCLPHPEKKKLILAELREDLFRVSFSGVESMLIPD
LKFGGYAEPGGFNKGRISFLLIEELSRSENAVNRIEIGSSPFIGYYYATP
ENSYGFLKGILILKPGNDGLFFLFLSGFLILLFLIDFMIRILRIKRNFFT
HKEGKEIQEIIGQISKRIDALQTAKQKAIESAQKSEVEEIQTLTSEEVDF
DLQNVPIPMKEVKQEDGPSIFVLPFELKREGYVSPAFLRDPEKFKEHEPI
APEIEKKRSEIFTPELQDLISKVNEPIREKPDIQIAKQEIEPEPISTNHT
ELGPGYMKWLNTLPIRERRKILEVLDELRYGLESEYSFILKYYISVFLDL
KLYGFAIHYYDRRNGSYSPFVTQGLRERTSGNMIFLYDDQYIGKESGTYS
IIEITDERKMDRFFRKKFDPIDLEICTSILTIPLSNFGIPFRFFLFFKDP
LTKENAQEIENLIFHSLEPVIPAFEEYDRKILGELFRDKRDVVSSRVHLM
RIATDGERGLTRSFKIEFHGKNFKTLESLRKKTMSQISEIIGPEDICFGI
GVGAFGLYTRKNLEKQIRSLIDQTGNPYDFVEDIYPENGKNLFIYL
>gid:5877    transcriptional regulator, AraC family
MDFFPDLNFLDYLIFVKEVLNRYLEYLYSASIVISFLTGLSGFYKATKNR
LNFVRGIFLMSACFLIIGHSKAFSLMTSDPNGILSLEKRVFFSYYYGFAV
CASLSSTFYVMYLFGALKNPLRLSLYSFLSFPTIFLISLMIENLISIVYF
GKSVLFTLQFSAGIFNLYYVIKYKMKKIYLNYPIQNFTLCTALIVHSIGM
WLGTPNLMILALSFTGFFIIYFFILEYNHPEFWKVSFSSELIEIKSEDNK
IQTLQTNTSSKNLVERLDISRIEEKIQKFVEDREYLDEEIRLSDFSAYIG
LSLHQASYYLNNYKDLSFTDFLSFHRLEEAKRMIEQRPDINLLEVALASG
FNSPSSFRRACLKFTGKPPKEFRNYVLHQTTPSITLELQNQLG
>gid:3110    two-component response regulator
MKEKVLNLLIVEDNERLRKSLIEGMKEFAKLKISYDCAKGEEAIDFALKN
EFDVLLADVRLAGTLSGIETIVAIRKEYPRKPVVIYSIQDSDEYFRAFCK
AGILSHYAYVRKSNYLLPQMIVPLIELAYEGKSFIDPEIETRIVEVKDQD
ENSPMAILEPNEKIVAKMLGEGLSNEQIAARLGFKDKRTISRINGQIYAA
WDLNESNSDEKVARTRAALIVRENRFLQWEEDGNVYYRNGSGDWIRWESN
LEL
>gid:5219    conserved hypothetical protein
MASDLSFVDFIVDQVKDAGQIVSKKMFGEYAIYCNGKIVALVCDNRLFIK
PTEGGRKWIGNVQEASAYPGAKPSFLILDRLEDKEWMSHLVKITVQELPE
PKIKSKKKNVSSQKKVRINKK
>gid:3268    conserved hypothetical protein
MQKEFTFYKNYREKEKLREAFFQFTPKALYGADFRLWYQLGFWENSYIPY
SFFKDEIIVSNASVCEIKIILNGQEFDAVQLATVGTLPEYQHQGLSRKLI
EHILEDYKSKTSFFFYLETKTY
>gid:3237    Predicted transcriptional regulator
MFKSLHSREAKIFCKNLIAARKNSKLTQLEVAKRLGEPQSYISKIESGER
RLDVIEFWRIFKILGKSIEFYFQFDEKQDGSEKKSKTLKVASNKRKKK
>gid:5471    conserved hypothetical protein
MTSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNQG
IVRNQMGPNGGYVLAKTPASINLKEIYEAIDEKIFQMHSKSPNKKCICGH
AIQPILSKVYEKAQKVLEEELGSTDLDSITKEILNFSKK
>gid:3958    hypothetical protein
MNIHYFECYEFNFELELVEIRRVYTCEELSEFAKINAMSWDPIDVNVLDF
YEQNQELFLEENCPLRFYLGFTDGIPIVTCEASYDKDTVGFYNICTRQEF
RKRGYASHILKCAL
>gid:3046    unknown protein
MEPFKPKPLLNKSELRQIKKSRTRVEGKKVITDDVKKLKSLNVTPDLPKK
ELVDYYKEPIWIEYYIPRESRFAYEVKYLFIKLIDPKPEPKDVILQEAIS
KEEFIDVLDVMFRYPEKENLIRSSYVNTFSFLESISANYKQFLKTKDVYD
LRVPLFHTEALMKWEPTVATLEFLGPYTIYNLNWLIRKLNEMEEEFSLED
ETISLLIKRRNEYWEENSLPIDEDFELFAALFYEQAFPHRGSEFEDNLLF
KDTNKE
>gid:4014    Transcriptional regulator, tetR family
MDSPNQEMHESIELDSKWPEGQKKIFLAAIEIFAQKGFSAATTIEISKKA
GVAEGLIFKHFKSKKELLLRLVSPILEKFFAPLTLRRLQTMVFSQKFTSL
EQFLTAIFEERIGFVRSNKNLMRIILQEAFVTLEVRSLLERVFRQRVVPL
VQEHLKKFQDAGMISKEISISSAFRLVAVNLAGFVLLTEIFYPPKPEDGW
DQETELKRTIEFIARGLAPKIQEVPAPVLKPKKKPTVRKTATKVKKKKKR
S
>gid:5949    hypothetical protein
MNFHSTFPKKEVSFSIQSPETIRTAIEILNIPVSALGGKRKIVKHTNEYF
HLFHLYQFLQNKNFTNI
>gid:6621    two-component response regulator transcriptional regulator protein
MKPTDTKIFLVDDHAILREGLKMILSGQPGFEICGESGDAEKALDQIGKL
NPDLVITDISMPGLSGIDLVKNLRKYYPNIRTIILSRHDNKEYVQKLLEL
GINGYVLKDDAGNDLLRAIEAVHKGETYLSPGITTHFLSGFVGSGKPGED
NQDAKKAFSILSDREREILKLVAEGNSNESIGKILRISPATVKVHRANIM
KKLDLHKVADLVMYAIRAGLIES
>gid:3521    Acetyltransferases
MMKNKNVIIKPVDENNWSDFETLFESKGGPHYCWCMAWRMTGEERKNNTT
ENRKKFIKQRVESKISIGILGYLNEEAIAWCSVAPRETYRSLGGDENLES
VWSIVCFFVKKEYQGRGVATTIIENAKDYAKKNGAKYLEAYPVEKNSPSY
KFMGFTSMFKKIGFTFVKKAGTRRNVMTYKL
>gid:3628    Transcriptional regulator, marR family
MSPRMVIYLISRIRDEFHKHLNQELKEKNLSPLTTSHADILFALVKKNKA
QMQDIAKMINRDKSTLTALVDKLEVLGLVARTKDSEDQRIIHLELTPKAD
SVRPVLLGISRSLLGNLYRGFTENEKKELVRLLMKLYQNQNPESVTVDLL
Q
>gid:6402    Probable RNA polymerase ECF-type sigma factor
MMTESEFAEIVNSTRNTVLSAIEKNLAERFYYAIDDVAQETYFRAYKALK
KNQFRQESKLSTWLYTIARNESLRMNDKLRKEEARAEKLINSKKEEDFLE
VKSNLNENSERNSQEVIGLLRSLLIKIPNKYRKVLEFYLAGYSEKQISET
MGVKPGTVKSRAARGKEMMKRVGAKEKFYEE
>gid:7135  LB015  two-component response regulator
MRAKLLLVEDDRSLGETLQERLEKEGYEVLWTVSAVSAKKLVKDERPHLI
LLDVRLPDGDGFALAEELKESKDCPPFLFLTAQAGAPERLRGFELGAEEF
IPKPFHLKELLLRVKHVLESHKHSVEETRFIYKDFMLDFQGFQIKRGGEE
FPLSKRDCALLHFLVSERNRTVSRTEILDKLWGEESFPTNRTIDNSIVRL
RQAFGEEGEKVIRSVRGVGYQWTGEIKNAE
>gid:7157  LB037  putative sucrose/H+ symporter
MNMKIRFLAAIAFLCVSLFLSFYFLKNTEYIPKDAIAVSNHFLRLLITKK
LKEAYSLTNENAIVGTSYERFQKKVDQELGNGDGMGNCDLSIKSYGPKQT
YGNRLKRYWNQDTVEVDPLYVEYYPCGLPFQIVLHLNRNGEWKIVNFQSH
AD
>gid:7204  LB084  ribonuclease III
MSFKKAQSHFFLKNPERVRSLQKLSKKIGIKFSKVEYYNTAFIHSSYKNE
NQEILEDNERLEFLGDSVLGLVAARSLFRKYPKANEGELSRIKSRIVSTP
ILNSISEKLELSEYLLLGKGEKNSLGKGRRKLSANLFESLVGAIYLDQGF
EIAEKFILRHLSEFVENPEKEESVRDYKTQLQEYSQKHFKILPIYRTKSE
SGPDHAKTFQVVVRIRDQWEASGSGVSKKSAEQNAAKELYNRIRKKT
>gid:7224  LB104  putative TetR-family transcriptional regulator
MKISATQAATIRKSILQIGIHLIRQNGPTVGIQEIADKAKIPKGSFYNYF
SSKDQFLIEALEEYTQNAILWNDQTLKKGKQKLFYLYKQKVILEKKFLQD
GISCLINVLSQYSSPKQQKLRNKLKLSLNSISKGILNSLLLNPQNYSKEI
SIHIQVLESSWRGAMLIAKATGDPSYLENFLSVHRKFIKEFL
>gid:7225  LB105  transcriptional regulator, ArsR family
MRISRYLDILSLVEQLLEAKIHSGNGPKQILSALKALSDETRIRILHILS
LSPLNVQEITEVLRMGQSRVSRHLKILTDAGFLIPEREGSWVYYRIPEEK
KSPIFSSEITELLLNYKEDLPFRLEDQTQISEILSRRDQRNTFYFNNVAQ
DWESIQKDVLDPAIYRKKILSYLPDSSSVIYDLGCGPGGLIPYLLTKSDQ
VIGVDSSPKMVEEAQVAFAGNSHVSLIHSQLENVASSATWSADAVVASMV
LHHLSNPPAVIREIYKILKPGGVFCLVDLKKHNQEFMRDNFSDLWLGFDY
SLLQDWLELSGFTITAHEEFDTDNVFKILIIQATKKED
>gid:7250  LB130  transcriptional regulator, AraC family
MFSANNLYDVISSLFSEMNLFYAHAAGVGTGIVMAITKLYTGRKDEFSKA
YGTILLSVSIFLMANNRVIFPQQTDPRLLKDSLFLGIYFGLVLYASAAVL
VCMMFILDRLQNPWYYCKRLTAIIPLALTAAFFLPGTIYICFCDSVAILI
TLYTSGWSIYKIRSSQKSNVFFNFPFITLAITSSLILDLTGTVIQSTKML
MFSELIPGFMIAYTTLIERFFPILFSKAYGESNKVLMDQELTDFSDDDLL
ESEEEIQSESTRNILEGVELEKIEERINSFLQVRGYADEELRLPDFASYL
GLSTHQASYYLNKHMSMKFADFLNMNRIEDVKRNLRNKSHMNLLQIALEC
GFNSASSFHRACVKFTGKSPREFRKLINSDN
>gid:7251  LB131  putative transcriptional regulator, araC family protein
MMNILDSILNQEILLSLIRFGAGFALVLGIGNWIRARKQIDYLVSSVLIF
TAIFQFIDESVLNTIPQTWLRKLLFLIDIVALAASGTLIFLISTMSFKRY
SKLPLIYYWNLIGPLILSLPIATFYEQQGSKELEFFLFAADLYVFVYFVI
AVANIFIDKKYESSAMSFKTILSLVILISLCIPLEILGIVFENKSLILLS
SVHTTFTVIFYYFLTLIRPNLLDIISSESGKSFVKRSLLHDVDISALEKK
LIHIIKEERIYLDEDIRLPDVSEELGISVHQLSFFLNNHLGMNFNNYINR
FRVEEAKSMLINDPSRSVVSVGIAVGFNSNSSFYKAFLKETGMSPKQFRE
TQTKVIHFQSSSADIQFRN
>gid:7259  LB139  putative regulation protein contains HAMP domain
MTMKKSLRLQIIVIYTILTVVNLTFVAVMIFENQTDLLISNFTLESDRVA
REILKKIESYGNINFENSSQTDEFQTKLLSIGLTNFSVIAAEDNSLEKTR
TLLSNGATATISDLKTKLTNMSNAKAALNTSYDIELDTDHFIVNLIFYLN
PKTFLISQIKMKEMVDRLRSLYIQLGLLLIWGFAFHILFGIFLYRKIFVR
LFLLKEVSETMATGNLNARISWNASAHDELDVLGNTFNGMAEQISSQFDT
LKLKNAQIQTELEIGKNVQECFLPEKRKTFNLINVEIIYQPMREVSGDIY
DIIEISDTRTAFFLADATGHGVSAALITSIIHYNVENIMKETVNPAHIFN
RLSDNLFETLQGTFFATGIFILFEKEGGYAYFCSAGHNPIYYYRKEQNKI
VVLESTGFVLGIGIPDEYSVLKIKTSPGDKILVYTDGVLDAANEKTTEPF
GDDRLLSAFQKYATLPTTELTEKLREEIHSYANVFPDDVTFGILEIT
>gid:7264  LB144  RNA polymerase ECF-type sigma factor
MATRKDFMDALYREYSGKIFDFLYKYSSGNPEIAMDLMQDTFLNFFRKYS
DTDIDQEQAIRLLYTIARNRSINYSRKFSTVKESGNSEMQEFQEQKLSFV
RKAELKDLEERLLVCLDELEEDEKYALILRFMEDYNLTTIAEIMNISVST
ASRLIVKATAKVTEIAEKKNLKP
>gid:7284  LB164  unknown protein confirmed by proteomics
MACHEIAALRLGMMNLIGIKDETTIRHEQSEIGTVLESPGPIRSLAEAKD
FESLIKFYEISLTDLEEKISKMKKDDPKMAYYRSLLILTKKIEFELKNSV
FIFQNFFRDLEEIHDFVHEIFPA
>gid:7348  LB228  Putative AraC-type Regulator
MSFMNAYIENFLNRIYNSKILSNFEHKISLKSFLQKWFEKNIFSTFLIFF
GLYLIIWNRTIPEILTPGDLYKFKLISIICGISIYSFLLLRLIILGIFEI
QISYRYILRNAITAMILSFAFLMYFEKPFSMMITGELFCLGICIYTLLES
GYLIFSRPYKKEYYFLFPILGGIGFGVLGNFIGTALYNVEWNSISYYFYA
FFIFTLYLLKRKIKAQNEATTSQNLVLSLNSETQEIIEQPYSMLEDEILE
FIEPLEEKNLLKEDDLKRAEERINGFIREKLYADDSIRLIDLSAYLGVSL
HQASFYLNKYKNMGFSDFINQNRMNDAIQFLVEKKNMNLLDIAFECGFNS
YTSFHRACKKWTGCSPKGLRKNAIQLNGSNYEHFKISINLQKAEILNKNL
ESNKFDTVVV
>gid:7445  LB325  transcriptional regulator, TetR family
MTLSTVLTFIGSKMKSLKSKVNVRTKDNVISEAMIRKRDRAATETAILLA
AIQVFAKKGYDGANTKDIAKVANANEALIFRYFGNKKGLLEAILTRSEKI
KKENSRRISKNSESYIDIEASLQRMISRKCKDFKEAEDFMKVAVSQVILD
SEVSRIIQRKIYTKIIPEFMGELEKFKKMGKIDSKADLKSVAYAISSLTF
ALGFMGQCVYKMPPTEIQAAIKETARIFRKGLEPESVKKRSK
>gid:7453  LB333  two-component response regulator
MVMKTILVIEDDPDIGNLIRKSLDSAHYSTTLQTSGEEGLKFYKANHPDM
VILDLSLPDIDGIEVCRTVRRNDENTPIFIVTARNEEIDRIMGLELGADD
YITKPFSVRELKTRVDVFFRRWDKKAGIKPNVGASGEIIRGALKIDPVRR
RVTLKDNIVNISRKEFDILQLMAASPGKVFSREMILEAVWGMEWDGFERM
IDSHVKRIRSKLEKNSAQPEWIETIWGIGYRFTDNYDNIVIPD
>gid:7487  LB367  hypothetical protein
MLKINVLSNKEGFRKPMGEHYPYIKIFADIIESGAWANLSSAAKTLYLVL
LKFSDQHFKPVWPSTEVLLRLTGFKTKKSIIQGKRDLIQAGLLQVTPGTG
HTSSRYYFCFNYPGSKIPPQGYNFGNPGGGEKETQGVGKNGSQGSGEVTP
NHINITITNNQHQEPEKTKKQVSLDELGKEYGPATLTEALAIAKGRGMET
NLRYVKGICKNLTKTNESLVPEFNQNQGEPYEKETTWNGFLRWSKDRLTK
SSIETLEKIRVEPDGRTLCILDPVTESLRMIIAKYFTEEIRPPILVIFSA
KNEENRITSTKH
>gid:5588  chpI  ChpI protein
MKTAISIPDELFRAAEKIAKKLGIPRSQLFAKALEEFIQSHSKESVTEKL
NKIYSNKSKETRNNITDLSVESLRKSLKNDSW
>gid:5346  fliA  RNA polymerase sigma-28 factor
MSKKYEKYNQQDETELWKSYRETKDQDIRSYLVEKYSPLVKHVAGRIAIG
MPQNVEFDDLVSYGVFGLLDAIEKFDPERLIKFKTYAMTRIRGSIFDELR
SIDWIPRSIRQKAKQLEQIIGMLENKEGQQVDDDAIAKELGISMEEYNSL
LTKISGTSLVSLNDIWFLGDENDEVSFMETLESPMNMNPDTIIEKEEIKN
VIVEAIKTLPEKEKKVIVLYYYEDLTLKEIGEVLEVTESRISQLHTRAVS
RLRSKLGKVKSVISRK
>gid:6453  hrcA  Heat-inducible transcription repressor hrcA
MDLTERHKRILKALVDEFIQENRPVGSKTLFDKHDIGLSPASIRTVLKDL
EDFGYLASKHTSGGRIPTERGYRFYVDSLVILYELTLKEKQRIQQEYLKM
QFKLDQILKATASVLSSLSNAAGIVIGPAKNLDTLKHIELIHVRGDEILM
ILVMRSGTVLHRNIFVDQNYSQEALYQVSKYLNDNLKGYDIYEIQNVIIP
KLMIRKDGPEDFIRIADLISSAMTPDNSEVTLYIDGFKNLYANFRDEEQQ
LSQVLSLLDDQGFLKAFFSEYIDQDGVFTIIGKDGDRSMSGVSIITSNYK
MGEKKIGALGIIGPQRMDYNRALPLVDFTSKLVSEMVTRISK
>gid:5852  kdpE  Regulatory protein KdpE
MNPKILVADDDDRIRKMIRISLNASHYEVIESATIQETILKAAKNSPDLI
LLDLQFPDGNGITALREIRSWSETPVIVLSVLASDPEKISLLDGGADDYI
TKPFSMGELLARIRVALRNKTQDPGSPIFISGNLYVDLSNRNVKVSGITV
HLTPTEYIFLTFLIQHAGKVLTQEQIIRHVWGPFAKNESGSLRVHVASLR
KKIELDPSSPELLLTEPGVGYRLAIHL
>gid:4180  lexA  LexA repressor
MFSMKDLTDKQQAVLAFITAIIKERGFPPTIREIGDEFGITAKGAYDHLK
AIEKKGYLKTAKNQSRAIELIRQSPMESLPVQATSIPVIGQVAAGLPIFA
EENIESYIPVPDEMAKGNVPMYALRVQGDSMIEVGINDGDIAIIEKRDIA
RNGEIVVALIEDEATLKVYYKEQDQIRLEARNPKYKPIKTKKATVMGKLI
GLYRIY
>gid:3670  nusA  probable transcription termination factor nusA
MAVKKIQSEGNLLEAIQQFCADKSLDREAVMGVIRDSLITAYKKKSGLEE
SSELEKPSPVTVEFASGKDSVVIAIAKKVVSGNPSSALEISLEDAKAIDA
SAEIGSVISFREKPVELSRIISSQAKQMVFQRLKDMEKELLFNEYKAKEG
ELTHGYFQRWKKDAMSIDLGKVEGIMPRREQNPGEKYHSGDRLKAIIQRV
ELRPREPIPVITLSRASADFVRKLFEMEIPEIYDGLVEIINVARQPSIRT
KVVVRATRGDIDPVGACVGMKGVRIQSIVRELGNERIDIVESSDDASEFI
ANAISPAKPVEVKVDGSGREAMVVVPDDQLSLAIGINGSNVKLASQLAGY
KIDIKTVTQYNAELASPEARERLERLFYSPVEETKVSMEQEEEEELTPLE
DLPGLSARIVGILKSEGIKDLETLIEYSQDDLAKLQGIGHTTAGQILKLL
RESVEWVEDN
>gid:3190  nusB  N utilization substance protein B
MSARRTSREIAVMALYQLELTQPPLKEVLKFKWYDKKTEPEERDFAVSIV
NGVVKNQEQIDTLIKKYSKNWDFSRISIVNKAILRLSIYALLYTWEVPKN
VTIDEAVELTKEFESEESARFVNGVLDAILKNEIKSDG
>gid:2766  nusG  transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin
MIENSDVNEWYVLYTNPRSEKKLKRLFQERKIECFLPLISKKKKWSDRWK
VIEEPMYPSYIFVKISFFKDRVRILQLPGAHHFVFYLGKPYIIPEEDLDL
VRTFLETYPDKIQVEIQEKLLPGKKVLIQEGPFAGFKAEIIQRKNEEQIV
VKFPGMNLVTSVTLDIKTLKLEETLGSNF
>gid:4572  parB1  Probable chromosome partitioning protein parB
MKKLGFNAKNLISTENQTPKKKDSYFQGSLTNLLGSNEITEILIDSITSI
DNPRTNFNFSSIKELAASIEAHGLLQPITVRKKGEKYDLIAGERRLRAYQ
FLKRKTIPAIIKNVEQINPENLTEIKLIENIQREDLSDLEIALTLSTLKE
RKKTTNEELAIKINKTEGWVKAKIAHITTLETLMKKGSLTNLNLFQEVPT
SVWVELSSSVKENPKAVENWLNSHFSKKEIPKQAEARIFAKGLKNGKLKK
NKNSKTESLEYLQKQEEELAEKIKKLQKKRKNILAKIAFIENS
>gid:7105  parB2  ParB-like nuclease domain
MALKPKALGRGLGNLIPVNESKTPIDSSSEGALREIKISEIRPNPGQPRK
TFSEESLKELSETIKAHGVIQPIVVKQLDSGYEIISGERRYRACKLAGFI
KIPAIVKNVSENQSMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITD
ISARVGKNRSTISNLIRLLQLPDVVQDLIKNGRISEGHARPLLSLADRKK
IEQLAYQIAEKGLTARQVEELVSNISEGRSSIPEKKRSRKDVNIVELENK
FRKKYSMKIEIGHNQNSGKGKMTIVYPNLEAMEKILNALGL
>gid:7147  parB3  ParB protein
MAKRSDFAGMDLLTAFGEKESSKLEIQLSDIVPNPSQPRVFGKEEVSDLV
ESMKRLGLIEPIVVRKSGKKYQIVAGERRYQAAKILKWNTIPAIETSASE
DKCFEMALAENEKRKSLNPWEVGRAIQFLRKEKKKTAEEVSKILGFTERY
VKQLSSIARLDQKSVGDLIKSGKDTSVKNLEALLKQKEGRGGEIISSRKL
IQSKIVLQIGKLSLQQREKFLKELSSLKKKYGIKD
>gid:7486  parB4  ParB family protein
MSSKSKRLGSLADVFQAEKLEGTVRKIRLDKILPSENQPRQDRKKGVDDL
ARSLEKDGLLQPIIVTKQNPEDENYRIVAGERRYHAAKQLDWTEVECKIL
DRDEKETFRLAIIENLQRENLSPYEEIEAMSHLKTSFKYTDQELGTLFGK
SRSYMTELLGISSLSKEELRSCKEAGIEGKNLLIQAVAASRKGTFFEFLN
LFQTGALKTVKDAKSFNREEENLFTPKIAANTNSKTSNSKLTEYKITKKQ
GLIQITSHDEALLGEILKLIKKEIRKKFGDT
>gid:6701  recG  ATP-dependent DNA helicase recG
MKNSVSKTETQSNGLLLPVTVIKGVGPSKAAALASIGIDTLQDLLNFFPR
RYLDRNLTDNVLLKTGETVTLIVEVIDAYLAHGKKSRLVVGTKTRNNERI
SIVFFRGVNFFQKIFQPGTTLVATGKLEYFRGFQLIHPDYEILTSAIKTT
YPISSTGSKKKKQEQEPEEELSELPEMIHAGRIIPLYPSGEVLKSEGLDS
RGFRKILYSALEKLKGKIPEILPNEIVKRRGLILREESYREIHFPTDENS
LDTAKYRLKYEELFYFNLLIEHKKKEREKIKRVLWPLPESETANKVRKNL
PFQLTEDQNSALQKIKELTNKEQPIAVLLQGDVGSGKTLVALLTALRYID
NQIQVCMVAPTEILARQHYQTILSFLGNMPFLGIELLVGKEPKKNRYEKL
YRIKKGDTLFVIGTHSVFQEDVYFSELGLVIIDEQHKFGVDQRETLRSKG
KNPDILAMTATPIPRTLCLTLYGDLDLLTIKSKPKGRMPIQTKWFQEDRR
EGIYKSIRKYVSSGRQCYIVYPLVEESEKVDLKSCIEAYEYLKHEIFPDF
EVGLVHGKMEVEEKDRVMREFSKNRIQILVSTTVIEVGIDVPNSTVMVIE
HADRFGISQLHQLRGRVGRGDQESFCILMTDSKVTEDAKVRLEAMVNFSD
GFALSEIDLQLRGPGELMGVRQSGLPDFKIADLRKDSNLIELTREDATLF
GNPGDLEKEEIRGRFSEGRLLFSN
>gid:6860  regX  Sensory transduction protein regX3
MKNQSGNPGQKVLVVDDEEDIAELIRFHLEENGYQVDTCQNGLEVLPKLE
KNTPDLIILDLMLPGIGGMDLCKKIKEKYSMPIIMVTAKSGETEAVLGLE
LGADDYVRKPFSTRELIARVRSVLRRIKDEEEDEFEGNITIGNIFLNLKA
HKAFINNSEVDLTLIEYKILNLFMTNPGVAFTRDKLLDRVWGKDIYVTDR
AVDVNIKRLRDKLGDEKERLETIRGIGYRFNEA
>gid:5828  relA  GTP pyrophosphokinase
MNGTKIMGFVKAPVTKDILLEGVRQKLGDHAYESVQKAYDVSERAHQGQF
RLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRD
FGEDITDLVEGVTKISKIKSQSKETEAAENIRKIIVATIKDIRVILIKLA
DKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQ
ILNPDEYQEVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVDGRAK
HFYSIYRKMKLKEKTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVP
GRFKDYIATPKTNMYQSLHTTVIGPDGKPLEVQIRTRDMNDIAEYGIAAH
WIYKEGKPSASEKNVKVKWLELLSSWQDSALDPKEFVEELKYDLHEDEVF
VFTPKGEILQLPKGATILDFAFRIHTDVGLKAKGGRINGRMLPLRTELRS
GDQIEIITDKRTKPSPIWLRIVRTPSARQKLRSYFKKLREENKKDLQQEA
EFAAEITLNVDVLEELKKKPSSKPTKQIDLAAGKVIVAGLRGIPVRLSGC
CSPLPGDGIIGFVTRGRGVSIHKKGCVTAKQQEQEESMRVITVEWDYGQS
ESIPVLIEVKSKDRQGIFMEIVKSISNTQTNIRESKASTDQRGNLVASFE
VDVEHLDQLKEILSNLKQIPDVYQAHRIKN
>gid:3749  rho  Transcription termination factor rho
MATARRDNKNRHQHSNHNHNNQNDSGDSFEEESTNQESQEFDSSENSDPR
SRKRKRGGYEGPAPAPIDLVELKKKAISDLIEVAKSLGVENTGGLKKQNL
IFAILQAQAERDGQVHAAGVMEKLPDGYGFLRSPDYNYVPGPDDIYVSPS
QIKLFGLRTGDTVEGQIRPPKESERFFAMLRVETVNGYTPDVAGKRALFD
NLTPLYPNERLKMEYDPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL
MQNIANAITSNHPECSLIVLLIDERPEEVTDMARHVRGEVVSSTFDEPAQ
RHVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNQVIPTSGKILSG
GVDSNALHKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKG
TGNMEIHLDRKLSDKRIFPAIDINKSGTRKEELLITKDVLQKVFVLRKVL
SPMSITESMELLLEKMRLSKTNDAFLASMNTQ
>gid:3492  rpoA  DNA-directed RNA polymerase alpha subunit
MSLKSLLKGFKRPKKIEFNTEANTPNYGKFVAEPFERGFATTIGNSLRRT
LMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEE
KDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDL
EIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSD
YEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEELEEEDDELDE
ADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKH
YSDQCLQELKVKLSTLGLSFGMRDF
>gid:6168  rpoB  RNA polymerase beta subunit
MYGQVERKRVNFGKITNLDYLPNLIQIQKRSFDWFLQADVKDETKRRHQG
LEAVFRETFPIESPNNDMIMEYSHYILGEPKRSPQECKDTDATFAMPLKA
VIRLIIKETGEIREQTVYMGDLPVMTEQGTFIINGAERVVVSQLHRSPGI
FFSYDMERDVFSARVIPYRGSWLEFEMDNKGILIAKIDRKKKFPATLLVK
SLGHGTNEEVLRLFYSSKKEKIAGATSKDLKKILGRRTINDIINMETGEV
MLEAGSKINEDNISILKEMKVKEVELIEFPKGKDNPILINALEKDGVNDY
EDAILKFHSLMRQGEPSTIENATTELTRLFFSPKTFDLGEVGRYKINSKF
EFNNPKEFSGEKARVLRPADIIETVRYILNLFSETENYYPDDIDHLGNRR
IRSVGELISNQLKTGFSRVERVIKERMTVQEIETQTPQLLISIKPITAVI
NEFFGSSQLSQFMDQTNPLAELTHKRRLNALGPGGLSRDRAGMEVRDVHY
SHYGRMCPIETPEGPNIGLILSMSSYARVNDYGFLETPYRTVKNGKVTGQ
IEHLTADKEEYHYIAQASGVIDEKGELKNKLISTRHRGDFPFRNPSEIQY
MDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLREEAPFVGT
GMETRAAYDSRICIVNKHDGVVTSVDAENIVVERKGGKESDTYQLTKFKK
TNQGTCFNQKPIVGVVHSEINGKVSKVSKEKIEVTGENGELKEYVLQIGS
KQYSPIVSAGEEVKRGSTLAGQVVVGEKLDEMGNILVKGTVLADGPAVDN
GVLALGRNVLAAFMPWEGYNFEDAILISERIVRDDVFSSIHIEEFEIQAR
ETKLGPEQITRDIPNLSDKAFRDLDETGVIRIGAEVKPGDILVGMVTPKG
ETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGFEGTVIDIKRFSRENQDE
LPAGVEEMVKVFVARKRKLLVGDKMAGRHGNKGVVARVMAEEDMPYMEDG
TPLDIVLNPLGVPSRMNLGQIFETQLGFAASKLGISFETPVFDGAEESDV
DNFCKEANLPLNSKFKLYDGRTGLPFMNEVFCGYIYILKLAHLVEDKIHA
RSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASHTLQELLTIKS
DDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIITDSEGN
TVDISDYEDEYSKSKKKIKFETIENA
>gid:6167  rpoC  DNA-directed RNA polymerase, beta' subunit
MRSHNDFESITIRLASPERIKEWSYGEVKKPETINYRTLKPEKDGLFCEK
IFGTTKDWECYCGKFKSIRYKGVVCDKCGVEVTHSKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLDMTVNQLKSVLYFEKYVIIDPADSGRNRGELI
DEEEYHGYLDEYGDKFVAGIGADAIKELLARIDVDAEARMIRQKIQDKDK
ISDKRILKRLEVLEAFRDSGNRPEWMVLDIVPVIPPELRPMVQLEGGRFA
TSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVDALFDNSR
RKRAVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KYHEMGLPKKMALELFKPFIMKRLVDLDLAPNIKSAKKKVEAEDKEVFDV
LEYVVKEHPVMLNRAPTLHRLGIQAFLPVLVEGKAIKLHPLVCHAFNADF
DGDQMAIHVPLTPKAQLETWMLMLSPHNILNPANGHPICGPTQDIVLGIY
YLTSELPSEPGVPLKSFSNLEEVHYAIDRGVVEFRTKISVYHQGKILETT
PGRLIFNTILPEGYAYVNRPLSDKETNRIIADVYDKYGPAKTVLMLDDIK
KLGYRYATLFAPTISIEDIRVSPGKVGLVGDANKEVEKADSEYRKGIITN
EERRKKVIEIWTKTNDLITESMFKELEKDKGGFNPVFIMAASGARGSKQQ
IRQLAGMRGLMAKPSGEIIELAIRSNFREGLSVLEFFISTHGARKGLADT
ALKTADAGYLTRRLVDISQDVIISEDDCGTEESISLGVVKEGENVIVSLN
DRVFGRYTAEDVIDPVTDQVVYPRNTLITREVGQKVENLGYDKIRVRSPL
TCESKQGVCIRCYGMDMARLIPAEIGEAVGTIAAQSIGQPGTQLTMRTFH
IGGAASAKVQEKEHKVSYTGIVNNINGRLITNEKSQSVFSRRGSIVIQRL
IQQYKTEELSNLRVENGQKVDKGELVATSPAGENITSEMPGTIHIENGLF
RILGEEAVIPVKTGTIVNVKVNDITQPNQPLAEFDPYNEVGISEIDGTVQ
WMDLEIGKNVRRDEDLRTSNILLKVIEQRREKLNPRIAVISGGSREEYSV
PVDAIISVQDGDKVKAGDILFKIPTVAEKTRDITGGLPRVDELFEARRPK
DATTLAETDGKIEISGEIVKEKRVLYIHPDNPDLEKVKVTIPIGKQIRVR
NGDFVKRGDQIDDGNLDPHDILRVKGVTALQVYLVQEVQEVYRLQGVHIN
DKHIEVVVRQMLRKVLITDSGDTSFVNQQQIDRLVFNEENKRVIAEGGSP
AESVPILLGLTKASLNTESFFSAASFQETTKVLTDAAIKGKTDNLMGLKE
NVIIGHMIPAGTGTKKYKDIAVFKSAYGDLDRPLEEEEEEEIPQAIAEES
DAEE
>gid:4971  rpoD  RNA polymerase sigma-70 factor
MENLQSMPEVQKIISLGKANGEVSYDDINEILPDKILNSEKIDDFFTLLH
EMGIEIVEEYTRNTLEPASTLVPKDDSKPARKKKESSASTSGSEDPIKLY
LREIGKVSLISGETEVFLAKRIEKGEKIIEETILSSSILRANYIKLLPKI
RSKKIKVYDLIRVDKMYALNAEEAHKLEELFFKNILVIQEQEKVLQEAVS
KIRKYSETSKKYKEFKEKIDASTEIIHNAIRELGVSQKEIQKISQKIKSM
VFRIKEIDRHFLKIKAQYGQDVRDIKAFNRFIEKNEKLDDIEVKMGVNID
EVREVIKDIRNNERKLRRMEQEAGSTVQEIKDWGEKIIKGEREISQAKKE
LVKANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFS
TYATWWIRQAITRAISDQARTIRVPVHMIEQVNKVIRETRLFIQEFGRDP
NNEEIAERLGWPVQKVKMVKNVAREPISLEIPVGSEEDSELGDFIPDTEV
ETPVNAAASSILAEQIRQVLHTLPAREQKVIRMRFGLDDGYPQTLEEVGY
QFKVTRERIRQIEAKALRRLRHPSRSKKLKDYIDG
>gid:3937  rpoE1  Probable RNA polymerase ECF-type sigma factor
MDSSTKKEQKQIVPKKPTLREIEIGLLKKIKEGDDEAYIQLVSPFRERLY
RKAISMVKDGDDAEDIVQDALISGYRSIRNFRADSGVYTWLYRIVVNKSK
DMLAKRKRAKENSMDDKEYQVTDDRLGFEKKIELSDESNYLISKINGLED
LYKEVIELRYFEEMSYAQIAEVLGTNVGTVKSRLFKAKEFLKHLILQDGK
GEGYFR
>gid:6855  rpoE2  Probable RNA polymerase ECF-type sigma factor
MREPILCNREDWDCIQKVLHGDFNSFELLMNRYQGLVYSQAIKAFRNETE
AEDFTQDIFLKVFESLSTFQGKSQFSTWLFVIARNEIIRKYRKEHPEISG
LDALLLAENEKEGEIYSEQESKFLKQENSEKIRNLVARLPELYRKPITLH
YFENMSYKEISKKLNLKMNTLKSYIFRGKEIMKDWLNNEKKE
>gid:6879  rpoE3  Probable RNA polymerase ECF-type sigma factor
MEQKEFTELIDSTKHIVLSAIKKNLFEEFHDSIDDVVQETYFRAYKSLSA
NKFRGDSSVSTWLYTIARNESLRMNQKRSRQTALASKLKEKVIFDNNSNQ
EKESISFTDFELKDLLAMLPWKYKSVLSLVGEGYKEQQIAEKLSIPEGTV
KSRVFRGKQMLKKNLIDKQ
>gid:5144  rpoN  transcription initiation factor sigma 54
MNLSQSLVQKQTQKLVMTQDLRQSIELLPLSTLELSDRINSELVENPMLE
EEYASERNRTPDLYSRDDLKRKEKNDFLKNSDVSWQDHFSLDKAGGAGTD
ASDRNQKYIESSPEKSSLSEHLLWQLRLSNLKPDEISIGEILISMLNDHG
FIPIPIPDLCTEMKLNEKKVRKVLDQIHRLDPIGIGAKDVQETLLIQAKI
LKPEDLNLHILIRDHIKDLEKLDYKSISKKMEIQLESVESLASEIKKLEP
YPATLYTPNKPDYVIPDVIVREVDGEFDIYINDEWIPRLKVNKEYKNILK
NAKESDKEYIATKLSSAEWLIRSVNQRRQTLFKVTSAIIEMQIAFFKKGI
QHIRPLTLKDIAEKLEMHESTISRITSNKYIQTSRGIMELKWFFSSGVRS
TEGGIESSKKIHDLIRNLVKEEQSDNPLSDQEIVDAIGKQGIEIARRTVA
KYRKILKILPSSQRKKVKSLESR
>gid:6864  rsbP  SigmaB regulation protein phosphatase 2C rsbP
MRNILLLFISLILLSIVLLIGVLQTSSETLKPPFYYYPNGTIIQSSEEFP
GILGKKVDLLELEIAIKMAESGQSYENGIHVYDKGVSETIPVILAPKSYY
SVVKEFTRDILISLLYLSVAIWFFFYTRDLYMLLLFGSLSCLSLFNFFLV
GFHEFHFLFFFFLYFTAFVILNISFRLRGKELPTRWFAPEIIFSLIAGFV
GRTQKADPHIFGILATNGVYFILFSSVICIFFLVTDSIRNLFPIQSLFKK
LSLILAFSAISILPFVSVEFSEFISPDFSKLMILFAFLIFPALIIYGTFT
YSIVPVQIAFSSSLTSIYLILILAGGYLFLLGAFFKFDPIATDKYLEEFN
VLFLCSSIYTMSSINRRLSNLVDTWSFKRNQKLHSAMETISAMISAPISM
RATINNMMRKVSEALDISKILVLIPADKFPRTDLKNINFIRISSNSEIWQ
YFATNTEVTVTTHLAYGLGIRESVYKFLHNSGVQLTYPIFNYSRGKEVLA
VFLVGEKKNRKNFNLGELHFLKECTRMASMLLQNYTLLAEEVEKKRIVRD
LNMASIIDKTLHVAESRHIQGVKIGFFSIPAVGISGDYLDIQKLDSNTML
LALGDVSGHGLGTGYLVSAIRGIIQNQIRKKSDLSKIFKVINSFLIERYR
GSEFMTFICGEYNSQKETFHYINAGHSSPICIRKDGKIELRSETQRVLGV
LHTEYKHLTIPIYSGDKLILFTDGVTETFNDNEEIFGDENFLNLLKNNHH
LDPQDLSDLVLKTIQEFRGKKDPSDDISFICIEVNKNYDSNQ
>gid:2888  sigW  Probable RNA polymerase ECF-type sigma factor
MVQSDSVDFSVLYEDNYRTVYHFLLKICGDPEVAEDLTQEAFLKAFTFFH
KFDSKIASFSTWTCSIAKNLYFKHYNKQKKEFGNIRLSDLVGDIEIDPEI
PENLEKVFLEKAIKDTIESLPEPEKSIILYKELKKKTLKETAQVLGISER
TVSRRLISAISLLRTKLEQQGFQF
>gid:3605  sigX  Probable RNA polymerase ECF-type sigma factor
MSQNSESQIFDFDGLYSRNYEKIYRFLLSKGASKEEAEEICQETFIKVLR
HWEKFDPSKGNETSWMLTIAKNQFLDMIKKKDTVEKRELGDSQKVLEIIS
KKETEYEEDRYQLDLLNASVESLPQLEKNIIVLRFLRKYTIKETADKLGI
SVRTVNRKTFATLTVLRKKLEALNFDFESI


# Treponema denticola ATCC 35405

>TDE1115 DNA-binding protein, putative
MFKRKKMSDEMFAELLQSVKEAVLIEKGEIPPARVFEIEPLDIAKIRSKT
NKTQEEFASMLNISIGTLRNWEQGRRKPDGAALSLLKIVSANPQYVESVL
QG
>TDE1647 DNA-binding protein
MTTLIDVQFIAGKDGKPEYAVIPFKVFQTLCNHKVREFNEKETIPHEVIK
KIHLEDMSSIQAWREYLNLTQTEIAEKMGISQAAYSQMETSKKNRKATLE
KIAQAMNIDYLQLRI
>TDE2404 RNA polymerase sigma-54 factor, putative
MLLKQRQQQILSQKMVMNQQMLNAVAMLNLSSEELQEEVIKEVKRNPALV
FKTSSRVSAASAEEGDKHQSFLESIEDDSRKTLQAHLIEQAGESITDEYV
LDAAMLIIQNLDQNGFYWVPLEELFAGLLAEKKINHAEIKKALNIVRRFE
PIGCACSGFKESLIVQAGILCESPKTHEILDIYKTIYSLCVKIIKEHYEV
LVFVSDLKLFIKKLAQKKIDIDLETAEELAGLIDALNPKPGLAYASKGDG
EKFITPIAEIKREGNEIKIIINDEEVPALEISPEYEKIKNSGSKEEKKEA
SEFLNKAALFMNVLAYRNQTILKVLTALVNFQEAFFLGRPCKPSSEGESD
KMQAGYLKPLKQIDIAEIVGLSPSTVSRVSNQKYIRCEWGLFEIKDLFSP
EVSGGLSKDFVEKAIQEIIESDTEKKTDTRISQILKERGIDIAVRTVNKY
RKEMGLPSSYHRN
>TDE1162 ParB-like nuclease domain protein
MAERKTILVSEVLPNLDRKMGGYGNIDTLAASIKEIGLINPITVRYESGD
NEFPYTIIAGRRRLEAVKTLGLKEIEAVVYAEDELIPNEEIALAENVNRL
DMHPVDEGANFKKLLKEGKTIDELSKTFDRSPSHIYQRIKLTELTDNMKE
FFKKGSINISQAARIACLPTEVQENIYNAISKDTWFDGNADYAIRRYAKN
RLDFPCTLCKNCTKRTRYTDNNLFPELNDRDDYCLDHECYEQEIVKHYRE
KIEKGVSNYSDLDFLFVNGIKEEFLMSLQKFFDFKIDLCSFMDYTQLDQR
VDVCTLFDEVRKCIIPWYDVIDDKIKFVMKDEDYNKYFKTKREITDEEKL
IIEALPDEYKEEAKKTADKQNLFNYSMERQAKTNTVCTLLKKEFLKPNPT
FYLSDNFFDCIFRSSNKDFICDAFKIMTGANLTNLKDTKRFNFKHIDFLN
LFFYAFILRILDSNIYEGLDTVIKLLGLDIKEAKKIFNEELKNLVIKDLK
KAPDEESDDESEYELEETEDEDITDDSFRSEKNEDGEKVCYI
>TDE0814 transcriptional regulator, putative
MKTVEAIKNCEPVSAIQKILMEKEIPPRVEYSLSEMGKSFMKVLKVMQKW
GEENLL
>TDE0033 DNA-binding response regulator
MLKIAVIEDNEVQSRLLKDYANEWANKNNLLPEIKLFSSGEQFWFEFEEL
SDIDIILLDIQMSRISGIELAKKIRKTKSDAVIIFITGIPDYMQEGYDVE
ALHYLLKPVKKEKLFDCLDRALKKQDKVKEENFVFSCEGRLTTLKQSEIV
FIESISHNLKIKTLKSEYITRMNLSEAEEKLNSKLFVKTHRAFIANLMHI
RQLQKDKAVLADNTLIPISRREYKNVNTLFIGFFTQGET
>TDE0713 transcription antitermination protein, NusG family
MDYYVVQVSTGKEKNFIEDAEFKNKFDELSYSIVFPQRILKIRKAGKVTE
KQLPVFAGYLFIGTDEISKDLYQHLRKCKGFYRFLPNNQEPKFLEGRDFE
ILNQFISFGGLAKISQVVFDENDRIKVIEGPLSGLEGYIVRVNKRKGRAT
VCLDMCQTAFSIDLGFEILNKEEKK
>TDE1101 acetyltransferase, GNAT family
MLKTEKAGIEEAKTILDIYNDSNKVFGVVPEQDIIETFENMIKTENTYIL
YEDNQAIGFISLKDKNTHGLISAIYIKHKIQRKGYGKYILNFIEQEAKHI
GLEYLILKALKMFEWTIEFYKKNSFTIFDKKEDELPFITEYIPPAKWEVI
MIKRIMTCK
>TDE0878 conserved hypothetical protein
MATNLAINEELLDTAYKIGGYSTKKETVNTALEEFIKRRKSEDLIKLFGQ
VEYDPHYNYKKMRLR
>TDE0339 transcriptional regulator, TetR family
MSKSEDTKQLILDTAKREFLEKGYNAASVRTIAKKAGLTTGAIFRYYADK
AALFEALVSEAADGLVEQFKAAQEAHFELIPQERTSESRDLSTEYLRHFV
NYVYDRFDEFKLVLCGAEGTKYANYIHDLVELDVARTETYYRLLREKGKI
KGSISLELHHMITSAYFTAVFETVVHDMPREQAMGYVEEIAVFFNSGWDG
LLKLI
>TDE0808 acetyltransferase, GNAT family
MKTNHPTPANIEFKEITPDNWRIINSLSVKKEQKNFAASNVTILARAFVY
RKENAKVFAVYHSDKPIGLIMQRDWIDGEKIVCIMDQFMIDKKSQGRGLG
KAALQKWLSMIEAEKKYSCVQLCYVEGDIAAKRLYENFGFYEIDKDEDEI
IMQKDL
>TDE1169 phage DNA-binding protein, excisionase family
MIMNMKQVMELTGYTQSYIYNLVHKKMIPVYKPNGGRLFFVKEEIEQWLL
GGRQMTSEEMHKEADKMLLDMAARRSKRRTK
>TDE0006 Snf2 family protein
MARQTYGTTPWGAWFLDMLKAYDDSGRLSRGKTYANTGKVNSLVVNGQTA
GAKVKGNYSPWYHVYFKFPPLSKTNKTAIRSILEKHPIELAGLRAGIMSP
ALIEALKKKKVRLIPARWNLIERDCTCPDSGDPCKHMAAVLFLLAKEIDH
DPRLLFKLAGFDIDSINVPETEVFEKGGTQKLGLLQEQPVPLSLRKNETL
NKAADLSSDSSVSETAHNSCELQSPLKFSLGESYLPLITNILPPEPNFSS
SDFIIKLTEFYHKAVLNYGLNFYGQEKQSEKQEEKSVNPFLFARVKVNID
NIRKQKRAFPLEPKSPLTVNIKLGETHEINQTLLQAQNFYKTRNSLNEMS
PSVKILFSLFALAGKLIQSSAFIPAVFTENKKLFIFWKSLSASSEIKADI
FKFAASLTKDFFLPVGKWGRLYCAELLLTALLTEYAASLKFFPNKSYTKD
KEIDKLFFLNEEIDISVPGKRNLDTVIYSWLSVLNYSNCGYEYRLTLEAL
KDDEFFLLSALVRKAKEKRIEAGDDSFALEAEAPFAELNTAAKRSKNPDD
ILRFPATLAAYLPALSILAIKKNVMLSREETGLFLQKSAKLLQRFGIDIV
LPKSLKNILTPKPVISVKSVKGAGNIVSFLNIDDVLSYDRALMLGDTLID
IDEFKKLFLNKSGLVKFNDQFLLLDPEEVAKMLKALEKPADTKEVLQAVL
SGNAVCSKPASEIIKNIFRQEEVPVPQNLNAELRPYQKQGYRWLYANIKS
GFGCLLADDMGLGKTVQIISLMLSFKNSKEAESPFLVIAPASLLSNWEHE
IAKFAPSLKTAVYHGAGRKFTTEADVIISTYQTMQKDIEKLKDKKVFCII
LDEAQAIKNSGTKKAHAVKAIQARGRVALTGTPVENNLEDMRSIFDFFLP
GYLGTADEFRKKWRIPIELHNSETEADDLKKITSPFLLRRLKTDPKVISD
LPDKIITNQYCNLTPEQLAIYENLVETELHKVMGAETKIERQAYVLKLLT
ALKQVCNHPRAYDKETPIEMKYSGKAAVLIELLNEIISSGEKAIIFSQYV
GTLDILKNIIQKELGTEPLLLHGQMPASKRKKAVEVFQTDSAYRIFLISL
KAGGTGLNLTAANRVIHFDLWYNPAVEDQATDRAFRIGQTKNVFVHRLIC
SGTFEEKIDEMIQKKREISGMSISAGETWISKLSNEELAGLFKS
>TDE1601 transcriptional regulator, TetR family
MSYCSDITKNRILECAKEEFLRNGFEKAQVGEIAKTANVTTGAIYRHFKN
KEELFFTLIEDVYEYTLDIVTDVEIRSTDKASMPLSEETDNVVIEALFSE
TMRFVDYMYEHFDEFKLLLACSKGSRVENFAEEIADRYTHKNMKLIQATA
GKKSSATKIKELEVHIITKGYITSLCECIIHAIPYNDVSRYIKSIVTFQY
YGWGGLLNELRIYHE
>TDE1670 transcriptional regulator, MarR family
MLNDIYKNEIINAWVEDNEPVDLIEKRYKNISNIVDGMYDFVLSFSYYYT
IRRDYGTGKKYTMIEMHILTDIYDNENITVSALAKKWNRTSSAISQIVHR
LIKWGLVYKEVNQADGKVFFLHTTEKAKKTVLTHKAYDNKDNVKTRKKLL
ETFTVDEMVAFDKILKAYTDILEKNNSKNKPL
>TDE0989 hypothetical protein
MLEKIKSLDNNMRFSELAKVLKTYGYIMTSPRSGSSHYTFRKKGCNPITI
PNRAPIKSIYVRMVKEVVEAEENNQKER
>TDE0608 DNA-binding protein, putative
METLKTNPKITQQEISKSLNISLRTVKRILARLQEENIVKREGSSRAGTW
LVVDEIR
>TDE0070 RNA polymerase sigma-70 factor, region 2 family
MTENLLLQYIKDSKKYPLLSAEQEAELADEVKKGNTEAIEVLVTSNLRLV
IKMAKKFSSNENQILELIQEGNMGLMKAASKFSKSFKVRFSSYAAWWIKQ
SFIRYLNSADKVIKLPVRKEALIRQVHKEEENYKIKYGILPSYSQLAEIM
KEKVDIIAQIKSFNYTDICSLDDPVDNERSANLYDFIPCNTYNPEEEFID
NEFKEKLNKCLEILNDREKDVLRNRYGLDGTMTSTTFAVLGKKYSISAES
IRQTQLRALKKLRADTNKIKAMVSV
>TDE1371 RNB-like family protein
MNTNAIVLYKNRPALIKGQADGKFEIETETGIKKVREKDFSVLAPSNSSS
LKNILTAACPEPDFNEAADFFEEGTALFSEISELVWENLNPEQMWAAWLL
VSASPLFIAESPDLPIKIRTKEEAESIAAAALKKETEKQAEEQERKEFIS
SLSKFIKEKKEENFDLKKYSHFLQEIEALALEKTDKSKLLNEAHLKETPE
SAHKILISTGYWKIEKNPYPTRFKHPLNSPKLELPPIEHNKKYEDLTHLT
SYAIDNEGSTDPDDAVCFDGENLWIHIANPADIITPDSKSDMDARKRGAT
LYIPEGVSRMLGESAVDAFALGLHDDSYALSFKLKLNDSAEILDVDILRT
KIKVSCISFEKADEEKMNTNLKHLFEIAEKNRKKREAAGAVSIDMPEVQI
KVETENENQKVFISPYNFTESFLMIKEMMLLAGEAAARFAFKNNIPFQYV
SQEAPELPKKLPEGLAGEYRKRKAMRPRNVGTIPAMHSALGIAMYSQITS
PLRRYGDLVAHQQLLKFIDGKEVMKTDDLLMRIAAGDIAGKNCSYAERAS
RQHWTLIYLLQNPDWQGEAVILETIKNTARISIPSIGYETEMRLKKELSI
NERINVKAEDIDIPNLTVRFVQV
>TDE2309 sigma-54 dependent transcriptional regulator, putative
MNKAISVLNKTNPISAEQALELILEALRELVDYELAVVMGFEDKNVLKVR
KAIGPLSSKLLDDFTINLNKRKDIARILDERKAFLFDENIPHVDTYDEIM
KLPENHSCLVAPLYIGDKAIGMMTLDHSMCSRFTPEIVRFISTISKLISV
ALVQTDASQSLIQKTESLLLERNVLLTASTNVFKDMVGSSRAWTTVLDSI
KLVAASDVPVLISGETGTGKEQAARTIHRLSNRAEKPFVPVNCSALVQSL
AESEIFGHEKGAFSGAAALRKGRFELADGGTLFLDEVGDLPFDLQPKLLR
VLQDGKFERVGGEKPVSVDVRIIAATNVDLAEAVSMGRFREDLLYRLDVF
PLRLPPLRERDDDTALLAEHFISDIRKRKGFENTSLSMAAIEKLMSMPWH
GNVRELKNVVERAAILSQGGEIPAEHLVPGTREFYISNAAKKKPLKPAVN
KETEKDKVLPEDIKPFDEAQTEIIQKALLASNGKIYGKDGAAALLNLKPG
TLQSKMKKLGIKY
>TDE2445 DNA-binding protein
MTLQEIFISNLRRIRKEKHITQEKLAELCNTDTAYIGQIETHKRFPSINF
IEKIASALQIEATELFKNHKKDKLSPSLKLELHNELINEFDKLLSETLKK
L
>TDE0937 RNA polymerase sigma-70 factor family protein
MYNRTKNNYDAEMNSLATYLKEINQIPLLTAEEEIKYAKLAEKGDEDAKN
MLVNSNLRFVVNVAKKYQNQGLPLMDLISEGNIGLMNAAERFDVSKGYKF
ISYAVWWIKQSILKAICEKSRMIRLPLNRANELVQIEKAKKEIDFSGNET
KELNEIAGILNMDNSMVHTIMNAAREPISIDAPVFDEPGSSSVNDFLQDE
THQMPEDYAMDMSLRDEVNELLKNLDDREAEIIRYRFGLGGYAPLSLKEV
GLIFNLTKERIRQIEKKALQQLKKPAEKQKLAVYVA
>TDE1100 acetyltransferase, GNAT family
MQIKTDIEFSKEEVINLYEEAGWTAYTKNKDKLWQSITSSLKIYSVFVDN
EFAAIARVLGDGITTILIQDIIVKQKYQNRGIGTALIKTIVKDYKSVRQT
ILLCDNDKKLIDFYKKNGLKNIQDYNISCYGILK
>TDE0259 transcriptional regulator, MarR family
MNDVESLIRRTAKIQYKVNANDKKPRTFGTQHKLYQSEIHFIEAIGLDGG
YSASELSEKLGITNGAVTQVADKLLKKKLIEKYKKADNKKTVYFKLTKEG
TVAYNNHEKFHAGFNEKLAAYLSSLSKKEFDAIARLAELVDNNIPDLSTQ
>TDE2277 transcriptional regulator, Sir2 family
MDKEKNDYDKLFSEITKARHLVAFTGAGISTLAGIKDFRGKDGLYKQPNT
EKMFDIDVFYRDPSVYYGMAKEFIYGLEEKQPAIVHTVLADLEKRGILKA
VITQNIDLLHQKAGSKNVIEVHGSPSVHYCINCSYTETFEETAKTAKTGE
VPRCPKCGSPIKPAITFFGEALPQKALMKAETEASKSDFMLVLGTSLLVY
PAAALPAYTLRNGGKIAIVNNQPTQFDSYTDLLFEDLEETFEEIDKRLKK
V
>TDE0441 hypothetical protein
MNCFKTIIELQDILFPKFYTAMDSENNEYIFLKTQDSMINSLDKVSDKTQ
LEAYENHIHILRFHQLWENEEPYYDVKDFPNIEVFKIRA
>TDE0393 transcriptional regulator, TetR family
MPKSTFLKLSDERKEKLRKTIYNMFIKKDYESISIRDLVKEMDISIGSFY
KYFDDKAEMYLFFFSEIEKKIFEEEKRRNASFFYPAKLLDLHEILTQEEI
DFSTSWLNVPEDVLYKFYFRGHAKQLYRSILDELTEMQQKAQLNPNIKAN
IAYHIIITSMFSFMLYIKENKITDKEDFFSRKTTYYQTVILPGILSEKYY
KQKYSKNAIKSEIIL
>TDE1900 conserved domain protein
MAKDLQISVITTKRAYDELERDGFIDSVQGKGSFVAYQNPERLKEAGTCI
IEEKIAEAIDEAKRLKITQKEFLEIVKLLFDEEY
>TDE2659 GAF domain/HD domain protein
MTEKNKYKELSKEQILIKILETESLIHSVQDVDVLLEQILTEARSVVNAD
AGSIYIAEGDRLAIRYAQNDTLQKKRPAGTKLPYIFFDFPIDNYTIAGYA
ANTKKLINIPDVYNIDADKPFKFGKATDEKTGYKTVSNLTIPILSMSGML
LGVLQVLNALDKYGKPKTFSHDDEIYLSHFASNAGIALEHAFVTRAMVMR
MIKTAELRDPRETGMHVNRVANYSVEIYDRWAFNNGIPMAEQTKYRDSLK
IASMLHDIGKVAISDLILKKAGKLTDEEFSVMKTHTWLGARLFSGNDSPL
DKLSMEIALRHHENWDGTGYPGHIDIETGEALKTDKKTGCPQGLKGEEIP
LGARIVAIADVYDALSSKRSYKDSWTEEDILKELKKMSGKKFDPEIAKAF
FEVLDRIQAIKAHLADE
>TDE1365 transcriptional regulator, TetR family
MDKKEELLASAHAIFTKKGYKETNISDITKSINVATGSFYKYYSSKEDIF
LEVYKLENTRVRQLVMEHVDWQLPIESIIESLFFVTSKHLFGNKIMAEWS
NPKISKILRKYYFSEQGKKDNQFHNFLMTVIDKKMKELKIKPQLAVRLKR
VYEFLYYIDCHVTDSDFEGCSEVIKLLTVYFVKGLVYENSAR
>TDE1606 transcriptional regulator, TetR family
MGNGDFDLTHKKILECGKKIFKEKGFEKANLREICAQAGVTTGAFYGHFK
DKEALFSELVQPVITDIEYHYSLLKQQSFTMYKKETVITKQTIESILDLK
LKGAVGMVSYFFDNKDIFELLAFCSYGTKHEHFLDEIIEKEDENHLKILE
MIHGKKKAAQVITKKGIHLLNHAYLYALSEVAVHCETKEEAEHNAYLIAD
FFNEGWKKMRTGQFNYELKLIYNYE
>TDE1114 transcriptional regulator, TetR family
MPEKDENRESRQEDRESRQNQLIDAATTLFFSKGYTNTSVRDILDEANDR
TSSPSVFYYYFESKEAIYRAVLRRYSERYVKSVQDAIDTHKDDAQSLMTQ
VTRLFLKTVKADAHGKEAAASPDNLLYSLKLKEELTQKFVEVWEIFIRSL
DWYKADAETVHKTAVFIAGGIGEMMYDFGYVHEKKEGSARKLMDCMIDFC
AGALNAPAAEKEKYRRIVYDNLA
>TDE1123 sigma factor regulatory protein, putative
MKEINTLDVYALITLSILNILLLLFLIRITATNKKKAGEISRPFVLLTHS
TLAFAFIISISTAASVFLKNYMILNIGLSVVLVVFTVYITVSEKIYLQDQ
VEKQKKDKANADYIKKLQNLPSEESLRARKLISTARLLLQKTNGLISGKK
DISSEMFPYIAESFLMELSADGAVVLAVQSFEEVLAVKALIGTFPPPYKL
PDDLARKEDHVFSNFKYARFEMGESIFTEVASQGKTLFIKDCKGNPLLPN
NGNEKFLQHGSLIFFPLMVSTVLVGVAAVSRNPDNVPFSENEVKIGEYLS
DFAAEMINLTLNISEASEHAEIENITDTVAKIQRILLPKNLKKVPGLEIG
EYFLQERGICSDYYDVIVQQKRVFIVLADVAGKSIQSAIIMIMIRAILYL
ITNTDQNTESILDWLNKGITGKIDIDHFASISLLSYEQKTNTIEFIGAGN
QAMMIWNNEKNKIELFQQKTDPIGIDVRSTYKSIKIPLHEGDVAALYTDG
IIETLNKAGEQYGAARLAKLIADNHSKNSKDIVNKIKNDMTSFIGTAQTH
DDRTLLIIKAR
>TDE1170 DNA-binding protein
MAFRENVKKLMDKHGLIAKELALRAKISVNTLNMYLGYKESLPNVDIGVK
IAKALDTTVEYLVTGIESSSGIVIAPEDIELIKKIHLLDDIDKKVVEDLI
QSFIDRKRSEVSAMETSRIG
>TDE1035 transcriptional regulator, PadR family
MLNKQEILRGLTDTLILGRLYSKDSYGYEINKQIHQKSSSLFQLTEATLY
TAFRRLEAAGLLTSYWGDGDTGARRRYYSITKTGKKLYRENVNDWEEFSA
AISGLLEL
>TDE2290 transcriptional regulator, putative
MSKKFVFSAKEVVVYPGQGVGTITDITKKEIAGEVIDYYVIYLSDSDMTV
LVPITGIDNLGIRRIVTKAEAEAALKFLSEDFEPIPIDWKARYQMNMDLF
KSGKILDTGSVVRSLYQRSKTKELPIQERKLYDSAYRIFQDEIAAALKMT
KTEVEAAIHLHLEPLGGPIEKFKDDYDDDDLIANDDERLDDDDMDEDDIE
DSDMYEDD
>TDE1789 hypothetical protein
MEESTFDKYIKNDIKQKKKFDKEYNNFLLSEFILEKMEEENISVRELARK
AEVSPTIIQKLRNNKTAGKINYQTFLSVVNSLGYRVNIERI
>TDE2115 HAMP domain protein
MKKILTIFLMFLFFISFLSAKEFYWENPSVISGRNGYFLKSASNANISAS
VWEEVVKSSDTEGLIYISTGVYVNNKWTINERIIPPIPYTADIPSIVSIA
VGNDDSILIALVKNRNTITILKSTDYGKTYTVKNIVTEIYDLLSPQLSVA
SNGKYLMFVSHGADEKFSIFYSSSEDGLNWPAFSEFNFAKKMDRIFLPAH
TASSKNDVLVFQALDKSGDRRTYQLFSSFSSDGCSSWSEPVRITDNFDFN
NQRPNLLYINSEKSIFIVWEQSSYRSEKNSPAYAVLDSKGKLASSIEILP
SGNGTMFSPRIIAYNNKPLITWSETYDGKSSILIARKEDSIWKTDSVASI
TGSLLFVNPFFVDGNLHIVWQEGVRAAKIMHIEPDHEVAKAQLQPLNFDS
KTLEGRQKITMKIKFPNDSSGIAGYSYEWSKDVPPEFVAPVIKKLKDETV
LVYEPEEDGLWYLGVRVCDYAGNWSEMTTISYERDIVPPAAPIFDLLALD
KKGFVKSNTFDIKWNPPDLDINGKPETAINGYIWNLSYLGTVDKFLSYLK
TAGSAFIDDDVVQKVLSDNLDVELNTSKISSVSNKREFKNYENGLYALTV
SAVDAFGNIGAPAVKYFALNKYIPYTYVADINAVQALDGSISLSLVGKGF
AAGGEVTSIYVDADGLPPYDLTIEKKDFSVLSDKLISNIKINYLDPGKYY
VGLMHSGRGVYFAQKTISFDDIGNIKLGDYGKVYKYNWLLSAMDSDFSDY
FLIICFTIFILLIMTLSITGVIYSVKEAIKIKYEVTVLLRGGAMSFGKEK
KLSALKVRGGGLRLKFMMFTMTLIISVILTLDLPLGFRFSETQERLLAEG
LASNTQVLLESLSSGAKAYLPSKNVLELGFLPSQVSALKEASFATITGVH
IDNKKVGYNFVWASNDEDILSKIDTPDFVVGKSELLLPQLENVYKKLDEI
DKEARDSVGEISDEIQSLTDMTMLIALNTDLKSVERRNEIQSAINQMETK
LSSELNGLSIKGSGSYPEFNSKKLSRDITSYLFYKPILYRQTGGQSNFVQ
GMVYIQVSTQSLIEQIDEATTALRKVILLISLGALSAGLVGAYILSSIIT
APIKKLVRHVAMIAATEDKELLAGKDVKLRTKDEIGVLGTTINEMTNGLV
EAAAASKDLTMGKEIQKMFLPLDLDEAGRKLTSGKTVDDNVEFFGYYEGA
RGVSGDYFDYIKLDDRYYAIIKCDVAGKGVPAALIMVEVATLFLDYFRDW
SYKKQGLKIDQVVSRINDLLESRGFKGRFAAFTLCIMDSISGNVHFCNAG
DNVINIYDAALKKMKEVILTEVSAAGVFPTFMIDMKGGFKVETVKLNSGD
VLFLYTDGIEEAKRLFRNSKLEPILCEEPGLEKDAEHETHSVGQDGEELG
KPRVCKIIESIFARSSFSLKKWHNPIENEQFDFDFTNLEGTIEDAVIGLV
SVEKIFRMYQDPKATERDMVQVDKKIDLFLNKHFRQYQTYCGNRVPNTSY
NEYLYYTNVREDQQYDDLTILGIKKK
>TDE2420 DNA-directed RNA polymerase, beta' subunit, putative
MRDIQDFDSLMIRLASPDTIRAWSYGEVKKPETINYRTLRPERDGLFCER
IFGTTKEWECFCGKFKSIRYKGVICDRCGVEVTHFKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLNLQVAALRSVLYYEKYIVIDANDTDLEPMQLL
TEDEYRDAHERYGAAFTAGMGAGAIKTLLQNINLDELAAQLRAKMIEKGA
KSDQRLLRRIEIVENFRASGNKPEWMILDVIPVIPPDLRPMVQLDGGRFA
TSDLNDLYRRVIHRNSRLSKLMELKAPDIIIRNEKRMLQEAVDALFDNSK
RKKAIKGASNRPLKSISDLLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLWQCGLPTKMALELFKPFIMKKLVQKEVVSNIKKAKLLVEQEAAEVFAV
LDEVVSEHPVLLNRAPTLHRLGIQAFEPVLVEGKAIRLHPLVCKAFNADF
DGDQMAIHVPLTQAAQMECWTLMLSARNLLDPANGKTIVFPTQDMVLGLY
YLTKERALPEGKKERLYSSVPEVLMAAECHAVGWQEPVLIDYETEPGKIE
TVRTTPGRILFNEEMPEGVPFTNYALNDKKIRKLIENVFKDKGPWLAVQL
LDKLKAVGYKYATYFGATLSMEDMIIPPEKAGMLEKANKEVLEIYNQYKG
GHITQEERYNRVVDVWQKTNSNLKEILMKRLQEDKGGFNTIHMMETSGAR
GSKDQINQLAGMRGLMSKPTGDIIELPIRSNFKEGLNVMEFFISTNGARK
GLTDTALKTSDAGYLTRRLVDIAQNVVVNEEDCGTINGIEYAAIKRGDEI
RESLSERIAGKYTLERVIHPITGELLIDVNEYITDETAKKIEEAGVETVK
LRTVLTCESKHGVCVKCYGRDLARNRIVRIGEAVGIIAAQSIGQPGTQLT
MRTFHEGGTASKNVEENRIVFNDYSIIVRGIKGSYVTLKNGHFLFTRKGE
FTFSRVLNEYALKKGETALVSTGTRVVKGNPLYTLKNGKEVLSENIAIAE
VRDNIIYLTGQEQTIEIRNGSEVVVKENDVIKAGETVGTFDPFADPILAE
YDGFVRFEDILPGTTLKEEADEETGVVEKRISDAHFDKMQPRIFISDESG
NTVGEDSYFLPGGAQLLVEEGQEIKAGAILAKIAKESVKTKDITGGLPRV
SELLEARRPKSPAVLAAIAGVVTIKKGLLKGKRTIMVRDEYGHDVKHLVP
IGKRMLVRDGDTVKAGEPLCDGSFDPHDILNILGENALQNYLMKEIKEVY
DAQGVTINDKHVGIIVRQMLRKVKIVSVGDTKFIFDQQIDKYRFHEENKR
VKEEGGQPAVARPMFQGITKAALNIDSFISAASFQETTKVLTNAAIAGSS
DELRGLKENVIIGHLIPAGTGMKQYRDIKLFDKNKSDLDIQMNEILERRR
LEAEAAQALEEKELIEEENFLDDL
>TDE0655 response regulator
MKQLIKILIVEDDNTIASVLKKNLEQWNFNVRCAKNFSNILEEFEDYKPS
LVIMDIGLPAFNGYHWCSEIRNKSQVPIIFLSSRNDKMDIVMAMQMGGDD
YIEKPFDMDITIAKIQAVIRRTYQFTASMNEIGFAGTVLNLSTLTLVYNN
KTTLLTANEIKILKCLYLAQGEFVSREKIMDVLWQNNQFVDDNTLSVNIT
RLRKKMENAELFNFIENKKGLGYKLNEHHGNR
>TDE0079 DNA-binding protein
MDISIGSKIRALRKVRSISLQQMAKDLGMSYSYLSGLENDKYSVSITNLQ
KIASYFKVNLVSFLTPNGPVPRVFRKKDLYSNANTYDNIAYKVITPESYT
HLQVSYAYLPPNEPSERNIHKHGEGQEMVLVLDGCVCVMVEAEKFKIEQG
DCIIFDSDAEHLIYTEEQPATLVIVSSPPYGQQILPEKKKP
>TDE0348 transcriptional regulator, TetR family
MAKAFTEQERIKIKEKILEAALELFHDKGTKALSIAELTKRAGIAQGSFY
NFWKDKEALIMELIAYRSSQKLNYIEKKFSNSLSDPAKFLTDIIYRYSVD
LMVKMQKQPVYEDAFKILEAKNRNEVHRIESLYDDFLTKLIEYWEQNGSI
KRADKKGLLNAFSGSFLLCSHYYQFDKEYFNEMLLTFISGIVNKYIEK
>TDE1690 hypothetical protein
MLSFDSNKEFALTRDLGVLKGIYLAPYMQVATALIGKARHAGGNMFRHQV
DTMAILIDYGYIDSVLLKASLIHDVIEDIEDFNVNEILSIDSESGQVYEL
VLEVTKKKGQEKTEYLKNIIKNGSEKAKILKCADRISNMISLGFVTDSEF
IERYCNETELYIFPIALEVNFEMYKELMALVVSRRQYLVECGYLEERVKK
MRKAR
>TDE0222 acetyltransferase, GNAT family
MSDTRIINISKIIANDCYEISKSFEEQQWQKPIEQYIQYMDDQNNGLIDV
LLAKDNNKFAGYCIIQWKSEYTFFYKNDIPEIKDLNVLKKYQRKGIATAL
MEEAERRIFYKSNLCGLQVGLTNDYGKAHQLYIKRGYVPDGNGLIYKNIN
VKYNERVVVDDDLTIALLKAKKEN
>TDE0037 transcriptional regulator, AbrB family
MELAKLTSKGQITIPLAIRNMLGLKTGDKVFFEESRGKVYITNASQITLA
NIQTQMQGEAEKAGFQTEDDVIAYIKELRKKS
>TDE2721 helicase domain protein
MQESKPLIIQGDRSILLDIHDPEANEARFALIPFAELEKSPEHLHTYRLT
PLSLWNAAGVGLSADSIMKTLTGFSRFKVPDSILVWMKETMGRYGKIKLL
PLEKPQEEKNGAEEKTDVEESGENQADGIRHETPDAEFLRLKPENALIFK
ELKSSKILLKYLIEDPDEENSFLISLLNRGTVKQALLKQGWPVQDEVPLR
DGEPLDISLKEKTSSGAEFEIRDYQRDAASSFVGDKSAGTGFGTIVLPCG
SGKTIVGMLTMSLLKTSTLILTPNVAAVYQWRRELLDKTNIKDEDIGLYT
GEVKEIRPVTIATYQVLTWRPNTDAAFPHFKIFRERAWGLIIYDEVHLLP
APVFRITAELQVIRRLGLTATLVREDGCEGDVFSLVGPKRFDVPWKDLEQ
KGWIAKAYCTEIRVNIAPSKEIEYAVGTTREKHRIASENPAKLEIVKKLL
TKHKENQILIIGQYLSQLEAIAKEINAPLITGKNTNAERELLYDSFRKGE
INVLVVSKVANFAIDLPDASVAIQVSGVFGSRQEEAQRLGRILRPKECDS
HFYSIVTRQTIEEGFAEKRQKFLAEQGYDYSILTEAELDK
>TDE2413 hypothetical protein
MHIIYETNGLGFLGWITDLPGAYIRGKTLEEARGKVNKEIALYNEWLNFE
KAIDMQINEEIKKSDLHIEDADSDIIFDSELIDFDKQDDFLFWCDKVLLS
GTKTEEIYKRMKNKSLIDITMKRKTFYGDVYCTINDQYRHIVNVQNYYLN
QIGTEMDIGDEFRLNRMEFIEKLKEKYLKEGNKLYRNESEDWTVKKVIRR
AIWHDRIHIRAIERMENRLSG
>TDE2650 transcriptional regulator, putative
MNIFLNNSSGVPLYEQLSEQIKNQILSGSLKKEEPMPSMRALAASLRVSV
ITTKRSYEDLAREGFLYSVSAKGYFVADVNFKKIEKSIKKSIEEKLKEVC
GQAKKINLNAEDLYEILRRIY
>TDE0876 conserved hypothetical protein
MQNGSICQDFIVNLTQKQVSEKVGMKNVYSYQRLEKKSNPSLQMIKKITS
IFPAIKLEMLF
>TDE2684 hypothetical protein
MAKFRIPLICTIAALALSFLLGLISGVRFSTILLRSLIISLISGGFVLGA
QILLDHFVPDLFQPVNAEKSAKTETGKNLNISIDEPVEMPFIDDEEYDPE
SDMIEAEPVDEDSISDDATELSDADLIDEDFENIKDDSQASASKNGVSSG
TEKKQEKNTVKELEELPDLQDFIPEDEPEQDDQMDFTQRGTSAFDVSTDL
AGSGMDTNTMVNAIRTVLKRDS
>TDE0675 conserved hypothetical protein
MTEKIEKLKQVLSEAETIVIGAGSGLSTSAGFTYSGERFEKYFSDFEVKY
GFHDMYSGGFTPFESLEELWAYWSRNIMINRYMDPPKPVYKDLFSLVKDK
DYFVITTNVDHCFQKAGFDKNRLFYTQGDYGLFQCSEPCHEKTYDNEKQI
RAMWEFRDEMKVPTELVPRCPVCGKPMSMNLRADHTFVTDKGWYKASKQY
EKFLQTRNIIKNGEQEGDGKVLFLELGVGGNTPGIIKYPFWQMTEKNPNA
RYACINFGEAVVPPKIEKQSICINDDIGEVLKKMV
>TDE0874 transcriptional regulator, putative
MVEAILYLEGDPLTDEALCKISGLSPEIVSDAIKALQESYASPQSGIELA
KMMGGWVIMPKKDLWEHLKDRYGKKNEGRLSRAAMETLSIIAYSQPVTRA
EIEAIRGVSADNMIRLLIEKDLIKEVGKKDVPGKPAMFGTTKEFLKIFRL
NSIADLPKLDETERERFELAR
>TDE0606 ParB family protein
MAKKSALGRGLNALLEEQPANQIVESLNISEDSIINIDPKLLQPNPYQPR
KTFDEEKISELAESIKEHGIIQPIVAEKHEDKGYFIIAGERRTRAAISLG
LETVPVILRSFEEKKKLEVALIENIQREDLNAIDEALAYQEIMELAAINQ
EELAKRVGKSRSAITNSLRILKLPEEMKDALRVNKITAGHARSLLSIVNP
ADQKILFSRILESELSVREAESMAADLNSGIGRITKKQKKETQSLSTDDF
ELRDIEQQFINSLGTKVQIKGNLKKGVVEISYFSKDDLDMLYKKINS
>TDE1486 conserved hypothetical protein
MSIPDNTETSFDHRLIDEQLSSRLRLAVMSVLIGCEKIEFTLLREKVNAT
DGNLTAHCKKLENAGYLKVEKLFVNRKPLTLYSVTDEGRKAVKNYIKQLT
SLIE
>TDE0703 transcriptional regulator, AbrB family
MGYPKGKYAWTVKVGEKGQFVIPKEARDVFNINPGDTLIVLGDINQGIAI
PPKNMFTSIIDNIFGGNVPKEDEE
>TDE1097 acetyltransferase, GNAT family
MSIKSIGLTDKIISQKEVKDFLQKANLNQRGNLIGLFDKEKIIGAGSLYT
NSFHPYRDYINIHIEKDYRNKGLGSRLLKALKENSAKKRFQVMCSSGKEE
LIQFLLKEGFVLARRSYSFDLKKEAQNIFLSKETSTEFKNMQIKPFINLN
SKEKEEFKKIFYFNYADTHKSINPLNKDICIKEFSNEILADCDEERSSCL
ISNNEVSAYVIVYIENLPEIGYLGGKTIEEIETYLNYFQVIINNLLNAYE
QIYFEIDDTDYYAFPLMTALQINCKESYNTYILN
>TDE2324 DNA-binding response regulator
MRIAIVDDEKLICEGLKIIFQSYPDIEVIATGSNGNDALKICEEKNPELL
LMDIRMPECNGVEATKKIKKSFSDIKILILTTFNDTEYIQKALQYGASGY
LLKDSSPDVIYDGIKAAISGNIVINPEVAKTMLFENHEEAEERVIRPLAE
IQDEFGLSQKEIEIIRLVSEGLSNKQIAYKQGLSEGTIKNNISVIFDKTF
VSDRTQLAAFAFKNGIV
>TDE1107 N utilization substance protein A, putative
MSEGIIEAIREFAQEKGIDDDFVLHIVEQALKASYKKQFGTDANAVFNEE
TGKIYSKKIITEDAKNPVFDISLEEAKKLAPSCEAGDELLVEVDPKSLGI
NSVKVGMQRAIQCIREMQKDTLYAEYSTKVGEIIIGYYHRERNGNIYVDL
GKVEGLLPKKYQCPGDHFGRNAAAGEESRIKALVREVKKHRQSNVVQLIL
SRTDAEFVRQILEVEVPEIESGIVKIHNIVREPGYRTKIAVSTDRDDIDP
VGACVGAKGARIQAVIAELDDEKIDILPYSEDPKAYIKSALSPAEVMDVM
ILDAEKRKALAIVSDSQLSLAIGKHGLNVRLANRLVDWNIDVKTEEQFKQ
MDIYTDARKAVENLFTDETSDEDEEYEEISNVAELPGITEDILTVLRNNE
IEDIQDLINMEDDEIRALEGLTTEMADTLLDIIANAVEVVEDDGDESDEE
SEPVSDDEGEVEEFECPECGHKITTDMTKCPNCGVDLAFEYEDEE
>TDE0091 RNA polymerase sigma-24 factor, putative
MFKGKGILRATSDEDFRAIYEALMPVIYKVAYNIVREGDIAEDICHDSLI
KMTEKKMEFPSIDDAKYWLIRVTRNASLNHVKRCGRERKAYAKALKEDTR
KVDTGEEIILKQESINSVQAALEKLPKNLRAVLQLKEYGSLNYKEIGSIL
GISEGNVKVRVFRAREQLSKYIGESDVYMP
>TDE2509 transcriptional regulator, AraC family
MKEKTKDDTIIIKLYEGIHLEIYDTYTEKSYSLKGEPRNVFRIDYCFQGL
LEGKFENQTFSYLGEKETAINYEKVALSKSFFPLKFYKGISILFFLDKIN
SNFKNTAQLFNIDIEKICKNLDLQDGWYKIKINSEISYIMNTLYEKQSLK
HIEYFQIKLFEILYLLSVINTEEYQKEEFYSGYHINKVKKIHEYAVNNID
KNISFKKMVKNEDLSYTIFQKLFKQIYGESPYSYLKKYRLEIAAFYISST
DRKITDIAINCGYLNASKFSDAFKSVYGISPIQYRNGEKPTITK
>TDE1497 conserved hypothetical protein
MIDLKSKISGIFKNMQVSFSHHRKPVIIIVCALIFILTLSLLLIIFSQKK
DDASYSETKKAVLSSKNSDFKSGKVDTDKLQIIDEPLYLPPIQFSREQHK
IWEKEEVDYWYEPPAEKDMEELHKQNKKIADKILEAAP
>TDE0549 TfoX N-terminal domain family protein
MASSKEYLNFILNQLSELEDISYRAMMGEYILYYKGKIVGGIYDDRLLVK
SVKSAIAYMPNAGYELPYDGAKEMLLVDDVDSKDFLTGLFKTMFDELPAP
KPKRRR
>TDE1222 iron-dependent transcriptional regulator
MKISQITTENYLKAIVKFLSESDKEKITTGELAKLLHVTPGTATSMAKKL
EKEKYIEYQNRIGCRLTEKGKKYGLNILRRHRLIETFLFQTLKMDGKNIH
NEAENLEHAASDLLIDKIDKYLGHPKRDPHGAMIPRKNQKEYTCTDSSLD
KVKCGIEYSISRLTGTDAQFEYYKTINLKLNSKIILQNKNEESGLAEIII
DGNKISCSTMILKNIFVEKIII
>TDE0056 DNA-directed RNA polymerase, omega subunit, putative
MIFPLKELIEFDDNIYEITCASTRRAYQLAKIQDPNVEKSGDKVVSAGAK
QIFTGEVNYQIERHPEFN
>TDE0191 acetyltransferase, GNAT family
MIIREVTIDDYKDIRNLNKNALGYDFPLEKTKTQLEKILTGKEAKIFGAF
VDNKLIGYVHIADYECSFNDSLKNIMGIAVDPSYRKQGIGRDLLTKAETW
ARDTGAAGIRLVSSVGRTEAHKFYEAMGYTSKKEQKNFRKIF
>TDE1812 hypothetical protein
MEESTFDKYIKNDIKQKKKFDKEYNNFLLSEFILEKMEEENISVRELARK
AEVSPTIIQKLRNNKTADKINYQTFLSVVNSLGYRVNIERI
>TDE2487 acetyltransferase, GNAT family
MVRLAELKDLSRVAEINVYGWRNTYRGIVDDNFLFCELSVEKSIERLKEK
VNTQNSTSKLYVYEDDKDGIIKGMMRTGMCRDSDKPDSFELMAIYVEKAF
ERSGVGSKLITYFQKEAKEAGIHELCIWVFQENRIARSFYEHHGFKPDGK
TQVHEALKAPEMRYVKTV
>TDE2079 sigma-54 dependent transcriptional regulator, putative
MSTVESIKRDKLNTLINTSLLINSNYSDLSVLLEKIVESAMDVVEGDAAS
LLMLEPDGERLRFEIAIGPKGIEAKKMVLDLDGIAGWVIKYNRSAIINDV
LSDPRFDPTVQKVTGYKNRNMIAVPMRIKDECIGVIEVLNKREEKDFDSD
DLNVLELFATQTAIAYQNAKHYEKSREEIICLQDQLEQDRGYHTFIAKSK
VMNEKLELCRNIAASDASVLILGESGVGKELIAEQLHLNSRRVNNPFIRV
NCAALPEGLLESELFGHVRGAFTDAISDRKGRFELADKGTIFLDEIGDIP
LTLQTKLLRVLQEMAFERVGSNKTLTVDTRIIAATNKNIEELVRQGKFRS
DLYYRLNVLPIYIPPLRNRKDDIQELAHFFLKKFSKEVKKPFLGFSPDAE
KLINAYSWPGNIRELENAVERACVLGKPPYIEEKDLLLKFESSSFEPEVN
YSNPDLKSAVNDFKKSFIVKILNEHKWNQTAAAEKLGIQRTYLSRLIKEL
EIKEI
>TDE0082 transcriptional regulator, MerR family
MNGFSIGEVEKITGIKSHTLRYWEDNIPVLQPKKDLGGRRIYSSHDLGII
YRLDYLINKKKYTVEGAAAEIINQSAAQGSLTAKISELRDQLLDIYGIIR
EEKND
>TDE1579 fibronectin/fibrinogen-binding protein, internal deletion
MSLNNKEIDLILEELKLEGFFIQKIIQPSYTALVFYLYKDKPLTLFISLD
AGACRLHSTRKKIPKFDKPMRFMELLKSRIKGGKILKAEQLNEDRIIRLH
IASGAGDFFLYLRLWSGAANIVLTDENNLIIDAFYRRPKKGEISGGTWLT
PEPQKIKKQDYCVREYDKTKTFNEAVEEWYINNAPKVSKEALLDEAENLY
GTKILKIEKALLKLKAKREEFLNAQSLKNAGDLLFSNLHLIKKGMKFIEL
EDYTKNGAKITITLEPLKTPQENANLYYEKYKKAVSGLEALEEDIISAEK
EIEKLKEKIEKIKTEENPYLIQKILQKEKIPVQQKAKNTKSAPGLKFFSE
GWTILVGRTAAENDELLRHFVKGTDLWLHTRDYAGGYVFIKARAGKSIPL
PVLIKAGNLAVFYSKARKNGQADLYTTQVKYLRRAKNAPKGTVLPTHEKN
LSIKLDEKILKQLEEEKISAL
>TDE0168 transcriptional regulator, GntR family
MKVIYDQNRPIYLQIVEKIKCKIVYGELKPGDKIPSMSDMSVEMDVNPNT
IFRVYKQLEGEGITESKRGLGSFVVNEPDLVGKLTEEMADQIILPAIEGL
RNLKFSDEQIIESIKAKLKINNPDAEHRGMLFS
>TDE0820 transcriptional regulator, TetR family
MDNNTEKIFADKDELNTRTKILHAAKQEFLNKEFADTNVRAIAEKAGVTT
GALYNLFDNKDGIFEALVSGVFDEFLDIVAHRDVFDAENFGMKTSDLSAI
IELSQRRFLKMVDFFYDNWDAMKLIVCCSKGSSYEHIFDKAIDLIDRKTL
QWLKQDGVKLSRRIRFFIHVMVTISFENLKEIFYHNLKKTEAVDYVLDFN
VYHCAGWKQYWMEQVKGNG
>TDE0476 conserved hypothetical protein
MNLIIFSGPPSSGKTSVILKTIDALKKQNIKTGAVKFDCLYTDDDLLYQK
AGVPVQKGISGSLCPDHFFVSNIEEAVQWGIKEGLDLLVSESAGLCNRCS
PYIKNILGICVIDNLSGINTPKKIGPLLKSADIVVITKGDIVSQAEREVF
AARVNAVNPRAVIMHVNGLTGQGAFELSTLLTDKAEDISTVQGMELRFPM
PAALCSYCLGETRIGENFQMGNIRKMKIAEEQGRKNEQ
>TDE0400 transcriptional regulator, LysR family
MEFKQLEIFIKLVENLSFSTTASELNISQPTVSLTLKQLEEELDTPLFLR
STRELKLTEAGNKLYNEAKNILAERDKLIEKFIHPERKVITIGASTIPAG
YLLPSIVREFKKKHPDIYIKVEEKNSLETIKKVSLNTVDIGIVGMKIEDE
NCEFLPIYKDEFVFISANNSYYQKLKKSNPNLKRIAEEPFIIREAGSAVK
QNMELILKSQKIDLDSINISASINDTEVIKQLTAEGLGTSFISRIAVEDM
VKNKKLIAFELGDVPHQYRNIYLVWNKKINYASHIKDFLNCTECFKVKTA
IEEKTT
>TDE1495 hypothetical protein
MKVLVFDRKIETLAFLCEKLENHGIITIAAENGSKFICNYLDPELDAIIV
ATKELAHYSLNEARLIKKIYKDITICTYFHEDCYNIKNINIVSSSGIPEN
IRGNEKILKIILSKCKRRPDLNKDYIYSLPKKSGILLKHLIINRQKGLSD
EEISTIFWGEKIPSKQNSIYNHVYNLKKSLKKSFSNRYTILKANKRYRLI
KLKKEA
>TDE0090 hypothetical protein
MSTCPDKDLYSAYVDGELQSPWKEKIEVHLVSCEKCRSVVDSYRKISLKL
SENSFPEPDLDGSFLKLYAKRQDCLKKMEFNKSKPTSWFYKSNKIPIPAL
AAAALFLFVLTPIIVLSTQESLEPSGAVAATEFKAIDSIINGLKPVNKFK
LNVSNVLGVNEDVSVFEGKKKEINLSQYVNLYLPPSNNAEFDILKQEIKP
QVLFLNTQNAITRTSVNNGQ
>TDE1382 transcriptional regulator, ArsR family
MIEDDEIGVSNEETVAHARAKMPDEQTMSDLGDFFKNFGDSTRIKIVSAL
ISGELCVADLAEVLEMSASAVSHQLRILRQAKIVKSRRNGKQVYYTIDDN
HVGILYSVGLEHIREGR
>TDE2501 response regulator
MGRKIAKVDIALLASYGVKKVISKPVKVDELLFSIGIILGTTFPMDPTPC
ILETRVNEDVIFIELAQGLNRDKLELLQFRIIELIESYKLAEAKILIILT
DLNLTYADTANLEYLIDNILAVKVVSPKNVKLLTLNQFVTDFFSQNPDYK
MIEVVGSLGQALSALLQTTEDKIAVTQTMLNPDNEQNENASNLETRFKLD
TAEKLSIAVIDDDLVVRKMMTAIFSGLNAEVTLFENGEDFLNKVENDVYD
VVFLDMIMPGMSGIDVLNGAKKKGITTPFVILSSVTQRDSVIKALEKGAK
RYILKPIKKETVLRKMEEVLGASL
>TDE0891 transcriptional regulator, putative
MKFERILEIIIYLLNHEKVSAKYLAEYFDVSVRTIQRDMVSIAEAGIPVY
TLGGRYGGYAVLENYKIKNINIKNSEQQIIISALESLATSYTNDKLNSLI
EKYNAIIEKEGGQKVFWDFSVTKENKKVQDSNMLLEKAIGGKNYIVFDYR
NSEGKSSHVCAEPLAIHYKWYAWYLFAYPKETKEYRTFKVARMQNLVISK
ERSFIKHGDIQQKMKEAELAYYKTCINIEIIFSEKEIPLIEEYFPDSVIE
KLSSQKCKTHIHVPAKERLWKALLLSFGDAVTVVSPKDYKEDLIKTAETF
LSNYDI
>TDE1346 RNA polymerase sigma-70 factor family protein
MTDLEKNPAIIKLLEYAKRKRTIGLGDLDDLLPEDLMSPETIPDILDILE
GAGVQIKNEGISESNSESDSDSQSGNDEDYRLLDDTYEEEDDDIKSPYSD
EIETPYIEKEKPRHETAKKLVRTSHEAGVDDPIKLYLQEIGKEDLLTADE
EVSLSKSMEDGEAIIKKVIKNSGILIPEFFVIGQKAFSKLDPAESNKPRK
ELSEEMAEKKRLKQVYGDSLRNIYSEIKQYMSLKKHCYDRESLESFLESP
ELQALRKKMFNSLKRIHIESEEIEKISDRFIEATEKVQDYQHKKERKEKQ
LGIKSYADLRKLGKRLAIPREREKLEKELNISANEVKDIYTQIQVLTRKI
RKIEYDFEATVDEVIDLTSEIKNGQRMLKNAKDKLINANLRLVVSIAKKY
INRGLQFFDLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSIS
DQARTIRVPVHMIEQINKVNRESRQLMQKLGREPNDDEIALQLGWSIEKV
KQVKNVAREPISLETPIGEEEDTLLGDLIEDKGVENPSNRTELTLLQEQL
EMVLSSLPEREQEVLKMRFGIEGGYPLTLEEVGLYFDVTRERIRQIEAKG
LRRLRHPKRSRKLKDYLDN
>TDE0344 transcriptional regulator, AbrB family
MRSKKDGKLHAWTAKVGTKGQIVIPKEARKIFSIETGDDLLILGDERRGV
AIMKGDAATKILMSIQGELIDEN
>TDE0440 DNA-binding protein
MFLREQQNLVINRLRKEREKAGLSQLELALRADISQNMINYIETGKRTPS
LDTLLKICHALNINPAVLFSDTEEEKEKAKKQVLDIIQRWM
>TDE2778 PspC domain protein
MKKRLCKSSRDKKILGVCAGLAEYLGVDPVLIRLLWIIFALVVGSGIIAY
IIAAIIMPYDTEVKDDDDESYEYAPRD
>TDE2703 conserved hypothetical protein
MNKSLLKKAVILFALTVLCIGFTFAEDGKSIVQKSLDVKRPKFTHSALKM
TLVDSKGNTEERMIEQWAKDPGDKTGAAVIVFKKPASVKDTRFLQIVNKD
RANDKWIYLPALRTVRRIAGAEGSKPFMGTDADYDDLETRKIDDDTHTLL
GEETVDSYNCWKVESTAVDPKSSRYSKKITYIDKVTCIPVMAEMYDKKGA
LLKVLKVEKLEQKNGYWIPIKGNLTNVQTKHSTHLEILNIEIDKPINDKM
FTQNFLNTGRL
>TDE2592 DbpA RNA binding domain protein
MSNKIRIEDEEQLISSLKDLIEAIKTQESPEELNLYRRIFKKAVPLTMRS
YVAAYLIKQAGIGGSRIYKKDNRNGLGKGTFKQNSARPSRPKVILAEEES
TSLFIGVGRKRGIFPKDIITLLIQGAGISREHIGDIRILDNYCFVQVMQN
EAETIIEKLNNSYYRGKNLTVSHSRRPEDDNFEDSETFEHIENYAEEENN
HSQTENEV
>TDE2320 RNA polymerase sigma-24 factor, putative
MIKFSNLLRKESPEAVQDRLLCKAVLAGNTEAFSLIAAKYQKRVYSLGMS
FFKNHDDSEDFVQDIMLKTFSALPKFRGESSFSTWLMRIAYNSAINSVKR
KREFVSAFDDFEIKTNDLTPEERQIQNCVKNAIRRAVNDLPEKYRICIDL
YFFYDMPYADIESITGIPVNTIKSHIFRSKKILKTELENQGIYGQEESPE
YPVLFKLNLAYDM
>TDE2005 conserved hypothetical protein
MRSIAAMTGITAGALYKHFPSKAAIFEALVQPLIGQTLSIGSDFSEIAIH
LYETKDFLSTKEAIRISLQNLCTLVYSRFDDFRLLFNRSAGTKYENIRHD
FVMADVTACKKFIADLKKRGINVRPLNDDQLHLIYSTALTPLFEIITHEY
SYKKALSFIDILTDVMYFCWNKIMQPETEINKKN
>TDE2187 ParB-like nuclease domain protein
MQIPIEKIKVRQRARKEFIEIEELAESLNRVGLLNPIIVDQNKVLIAGQR
RLEAAKKLGWKTIEARVLSVEDESLALDIEIEENVQRQQFSNEELLNAFT
RLNRLKNPGFFVRIWRSIKAFFKRLFGKKKESA
>TDE1784 transcriptional activator, AraC family
MNSIQSFNKTIDYIESTLDTEPDEKEIMNLSRYSYPLFSRIFSILVGYPL
NEYIRLRKLSRAAADLRNGNEKVIDIALRYGYESPDSFAAAFKKFYGVSP
SEVRNGKSFKVFSPVKLSLTVTGGQTMEIRIEKKRAFSIAGLCIQSNQTT
DFPKVWNDLFNKASHEELITMGNGQSYGSCYEVKDCNSFNYMAGYDCTDE
QKAETFGLSVMHIPEAEYAVVQLKGPVPDCIHQGWKYVMDTFFPEQGYRH
AGTPDVEVYKEGDMYDKNYNMELWVPITKE
>TDE1746 conserved hypothetical protein
MKIKLMDTGKNILFLLVILIVLITSFVLVLIKMQRDTVQDYLSSDKILKV
LLVVEDKGVPISISILAYYPETKRAAMFDVPANIGLIIQSLNRTDAIGAV
YTEKGISSFKAEIEKLAGISVPFYLTCNLENFSMLTDMLGGLSVFIPSPV
DIENDNTHVLLPSGSVSLDGDKIRDFLVYEDDLDAEGESAARKQKAVLAL
FRAINDNSPEIFSKERFSVLSGNFKSNVAGSDLKNLLESISKMDSERLVP
QRLTGAVRIIEDKRLLTPFREGQQIKEIIRQTIAVLASDDSSALERVYAL
EILNGTNVQGLAKSTSELYQSFAYDVVSIGNSENPVAETVLIDRIGNPSV
AKIVAKVIRCKNIQTTQLPAEGEYGSETNVDFTLILGSDFNGFFVVEKKE
DKKDSDENDKDKN
>TDE0114 iron-dependent transcriptional regulator
MNKRIHVTGTITSSKEDYLERIYDLSLIDEQVRSIDVARALNVSRASVNK
SLGGLKEDGYIEQEPYGTITLTKKGRAIAKDVRTRHNALRTFLTQVLKVD
YEIADVDACEMEHAISKHTADKLYAYLKKLGITEDDAGK
>TDE0630 sigma factor regulatory protein, putative
MIKLRKLLSNILISVGMGSVFALFLIFVSPRFLFLGKFYSANDMTLALSR
LEIIPEITQIHRFIIGSLVFVIVAIFADSLIRSFYKKIESRAYDKPKTKV
FAEFLKKIRFCYTIENLIDTVQNELEYSGDCSVMLVDTIENIVLYNSASR
FISSPETFSSLHEITVEYKPGVYFFNADMQGCKLKDARIAAVILEKIQFF
IICGYFNEVEPEIFNTLFSEFLSYQNRVTTLEQLLYFSELSQEWNMVANT
QKAFLPQKLPEMPMLELAAYFKPLVNVSGDYYDAIKVDEHKTLLVVGDVS
GKGLSAALVMGIVVNTIKIAKNKEDLPALVLAVDSAIKRMGLLDKYTVLF
LGLVDTEKMTIKYVNASMEDPMILTESPDGYKVKVLESTCSIVGIIDFDK
IEVHERPLYRGDVILMMTDGVPEAMNNEGVELAETDMYMESIKSFVQYSA
DDIVQKVAGMAYAHAGNQPMRDDITIMCAKVKG
>TDE0660 transcriptional regulator, putative
MRSERLFEIVFILLSRKQTTAQELAKKFGVSVRTIYRDMDILSSAGIPVY
TMQGTGGGIFIDESYTINKSILTKGEQEKILLALQCLSPIDEIHTESILN
RLSAIFQKNADWIRIDYSRWDNKNDHHLFKTLKDAILERRAVKLEYLSSY
GEKTERTVYPLRLLYKSKAWYAECYCTEKNACRLFRLTRILSIIKTLKTF
NRADLLGKIPDDKKAAPPPLTNIKLKCTAKTAYRLYDEFPPELIAKNSDG
SYTLNAALPFDSWVCGFILSLGTEVEILEPENLKTEIAQLAEEIMKKHRK
V
>TDE1858 transcriptional regulator, PadR family
MIFSINTGLLEACVLALLKDSDSYGYKLTQDVKSLLPISESTLYPVLKRL
QTSGYLETYDQPIDGRNRKYYKITPAGLRQHELYIGEWKSYKELIDKIFK
GTAL
>TDE1099 acetyltransferase, GNAT family
MKNVDCNIEKMNEKSYNTIKRDMIKNLAETFIQTKKANELTAISLAEKEL
NGILTEGVKTKNHNLYVVKKDSQKIGYLWYFIITHNNETFPFVMEINIDK
QYRNKGYGKQTMLLLEKETINLGYNKIRLHVLLNNTTAYNMYKNLNYKTI
KKIDDGEILEKELNGCLAGHL
>TDE0127 DNA-binding protein
MSYDYESILAKNIRRIRHKLEISQMELALRADVSIAFINAIENKQKWVSA
ATLSKITDALNTTPYELFLTDDISQEDLTIIAGRHDELIKDLNKLLKKYT
SNCF
>TDE0895 transcriptional regulator, AraC family
MRTVEDYWEDFEHFGFIKHLKDGRRDYILDEEKGSGGFSILGDTETAVAT
ISDCTLYRPLVIKADNVNERIIELGQYYTGLASYYEKKEKSCEFEYGLNA
YVNTFSFYGYKRIEPHVRFINIGFGFREKFFSSLPITLEEDFFERAACVL
NPEPIVIPKITAICNSLKECTLEGGALKLYIQGKCLEVFSLLYDYIYKAK
PAINVHLSQKDKAVLKEVKTFIEEHFADHVTIAELAKKFAINQQKLVTGF
KDCFNATINGYTQKIRMTKALELLYDDTLSIIEIAQAVGYYGDGYFQKAF
KETYGITPSRMRRDL
>TDE0676 conserved hypothetical protein
MKISVRFTAAVHTLLCIRYFEKDMRVTSDFISASTGVNAVIIRKILLQLQ
KAGLVETAAGVGGSHLAQTADKITLLDVYNAINEGDEERDIFNFHPKPNP
KCPVGRKIHLVLDDKLDDAQNAMKDSLSKTTIADLSKDI
>TDE2367 transcriptional regulator, putative
MTTDKLITKKKSLKQDAYIKIYDLVTDNTIKPGDIINLSDLEKYLKISRA
PIRDALIELCNENVFKSIPRYGYELITLRQEDLVEMLNYRLVLECGFLEK
NWKEVANSDHAILNKLLEHTREFSNTNAVSEWQNNSVFHIGLFKLHNNSH
ALLSLEHTMKKMTRFFIQNYWEKWEEITKKTFSSHHENIIYAIKKNDKAR
ALKHLSSDIGGFKR
>TDE0801 conserved hypothetical protein
MQIGTKFSVSIHILLCVEFFKDKCKVTSDFLAESVKTNPVVIRKLMSALK
NAGLIEITQGTGGIALKKKAAQISFLDIFNAVESIKDGKLFKIHDTPPNE
CPVAQKINFLLDGYFLDAQTTLEKKLNSFTLQSILNKIKDIQIS
>TDE1990 ATP-dependent helicase, DinG family
MEYFDDDYFDDEKIYPLDPKTVSSLLEEDGPLASFFERYEAREPQLALTK
SICRCFNEEAIGVFEAGTGVGKSLAYLLPAMMWAKQNKKRVVISTGTINL
QQQLIEKDVLTAKKILGKGFQDMKACLVKGRHNFLCLRRMTQALRENDFF
TEGQEELDKIKEWATETKDGSRSDLDFMPTEKVWSTVCSEPDNCPMNKCP
YFSGCFVMKLKREAENSSILVANHHILFADLSVRAEGFGYQGTAVLPSYD
NIIIDEAHGIEDAAQSFFSSDISRFALHKQINLLYRFRRGKQAGILSGIV
SISKKAELFTEIINLLEVAAASFNILEEQALQVLQTYQSKSLAQTSSDEK
EKLLSCVDNFFKNINNLNIKLENLINAADGEEDEEGYIREGLVVLRRLKK
MASVMENFLNSSEFPNDVFWFEKIKTSQGEAVRFIQTPLNLAPIMRRSVF
MPMATVICVSATLKIGDDFNFWLNRNGLYNFTEKKIIKDFFPSPFPYEKN
VVFNIPTDMPMPDENNFQDAVNETVLALLEITQGKTLILFTSYDSLQKTC
EYVREHIDEKIKILKQGEADRMQLLYEFKDDVTSCLFATSSFWAGVDVPG
ESLSHVILVKLPFAVPTEPIFKARADLIEKSGGNSFMQLSVPEAVVQFRQ
GFGRLMRSNTDRGIVTVLDKRILVKRYGSIFIQSIPQTIQCFSETKAVLN
KIEDFLYNN
>TDE1305 DNA-binding protein
MDWYKEAEKRQTPAKTLRFYRTLNKLTQVQLAEKLGVTKQFISNMETGQK
PISRKTAYLLSEIFGIDAGRFI
>TDE0556 hypothetical protein
MARYELGAIYEIDAGKKSYYARLLNCDLYGVFAPLSGEISEEAFENTPYR
LYISTGSYAVKRGFWKKLFPSPDKTDIERWSRPLHLVVFTPWDIEGALNR
RTSFDKYGHTEILDEKTYIQFLKQGFISIIQPMYEKVPQFLNNYYDDWPA
SEIYSDVLTGAGTAEHQQKQMSSLKKIGFDVSKY
>TDE0133 transcriptional regulator, GntR family
MKSEEQSLKKEKIASLIQDEILTGRFLAGEYLLPERELADHFDVSRPVVH
EALLILQSKGLITMRPRHGCIVNDLSSSISMRLLTELYRNKQISEPEKIE
AGLVEFRQLILTHIIKKLINRISKLSVKERYHLFLPLKNKIHFSRSEDIE
TSAIEDFEFYRTLIDLSDSPIFLLSLETAKEIYKYQFKQFLCENISYADR
IPEYKQLFFNALIEADEENSIKVMIKLTQPETYRDAELDNSMRGGCRRL
>TDE2109 ATP-dependent RNA helicase, DEAD/DEAH box family
MLITFKELGLDDIVLQAVEAKGFEEPTPIQVLAIPRLLSGEANVIAKART
GTGKTAAFGLPLVQELRSNTGKVRALILVPTRELAVQVAGELESFRIEEY
PRIATVYGGAAIGPQLRSLKTGVEIVVGTPGRIMDHLERGSLKIEDIEYF
ILDEADEMLNMGFIEDIENIFSKANPEARVLMFSATMPKQILSIASDFMG
DYEIVEEEPQEERASLTEQFFWVVREGDKTEALVRLIDTSPNFYGLVFCQ
TKIDADDVAKELDERHYEAAALHGDIPQSQREKILERFRSKKTRILVATD
VAARGIDIEGISHVVNYAIPYDGPTYTHRIGRTGRAGAAGVAVSFVRPNE
VKRIEYLRKHARGELKEGKIPSIEQVIEIKRTRILKETAAQIEKRISEEK
PEQGFAAFANKLTEYGDAQTVLSFILQMQYGSFLSPAHYKTIKPVRSEGK
ARKSDDDSLRLYIGVGRKDGITKRKLAEMLSRLLSIPERLVDDIEVMDKF
SLATMPKNAANDALRLCKKKRGLPHMHIDVKSEAPTNYGSIGKGKRGQKR
KNGTQRKKEGLSSASKYKRK
>TDE0496 DNA-binding protein, putative
MNRIAEFIKTSRKSAGLTQEDFAIRAGLGLRFVRELEQGKETVRMDKVNV
ALAMFGMEAVPGKKEGVTSATK
>TDE2412 acetyltransferase, GNAT family
MDLNFRLSKDAEHIALMSKDVQELHYRLYPEYFKPFSYDEILNFFKKQLQ
EENWFCYIVSCDGKDAGYALFYIRDYQENPFRKAYRGIHIDQIGIAPEYR
QKGIGKAFIKEIEKIAVKEKASQIELTHWELNEDAKCFYESLGFDTYIRF
VVKKI
>TDE2627 transcriptional regulator, TetR family
MPRDKTANHIKIIAAAKAEFMEKGFDKSSMRSISKRCGMTAAGIYRHCVD
KEDLFDQIVAPAVDRINAWLDAHVARYAEAVQKEKHIQWRDSEIDMMREI
IYPNMEEYHLLLAKSRGSKYEHFLHDLTEGQQTQLLKYLPMLKAQGYAVK
DIDSKELHLLLSAYTTALFEPVIHNYSLEEALHCLKAVEAFFVPGWKQLF
GF
>TDE0817 histidine kinase-related ATPase, putative
MKFTKEIEKTIKTFIIEQVSSHKNDIVTFTMKHFGISKPTTAKFLNQLVS
EGIIEMKRKGRYPDYSLVTKKYFFVYKLKDKLEEDVILRKDILPLLSGLQ
ENVQRIVQYCFTEMVNNVIDHSNADTMNVEVDLNALNIEIFVIDNGVGIF
NKIQKDLGLEDPKHSILELAKGKFTSDPERHSGEGIFFTSRLCDEFTILS
DNLFFSGHHENDWLLENPDSIPVSGTVVSMLIEKKSNLNISDIFNEYADP
DKQPGFYKTRIPVKLMQYEGALLLSRSQAKRLITRFDKFLEVILDFQGVS
EIGQAFADEVFRVFRNAHPDVHLKPINCVPAVQRMIAYISADYFQNVYNS
DSADINRLN
>TDE2474 acetyltransferase, GNAT family
MEILIRPTEKKDLPLVKALWADGDVMKFVGFPDGLVQTDEEMARWYDWVL
KNSPLSMHYSIFEGEVYCGETWYSIDTVHDNLTSLDIKLFAKARGRGIAS
KALSFAIEQARLKGAKKVWVNPVPQNEKAIKLYKRLGFSASKVPEHILKK
EGEDGYIYMEKELR
>TDE2581 hypothetical protein
MKILNNRYRIIKELPIELKTNTGFVVHDLGSDNREQLELRLIYASDLDED
FMQFIREKFLLIKQLKESVHIKNYDFTRLISIHNKIIDEDIYLYTIEHIE
KKIPILDFLPDATTKDIFELFAAILKELNYLLTYGIVYNNFDLTNIYVIK
NNGRIFIKAKDLVTEKNQYSDQIGLLSNEEIYTFNYNHDILKTIILSLFL
KKNIIKNHEKYFQELQQIETNRLNDENEKHLYKCFFKIYNKINTRKLKKN
PTPFMK
>TDE1953 transcriptional regulator, TetR family
MEACKRTADTKDLILKSAKKYFLEYGYQAAPLRKIVSEAGFTPGALYGYF
NSKEELFYAITDPVANKLMEVLDRIRSEMDALPKKERLYGMGKVYYPNIP
KIVDILIADRDAVKLIVNGAKGTKYENFLDTIAGRNALTISKTVKNIEEK
NICPIKEQTIEVLMEGYIATLFRLIISDKDRETIIRCMEMIGKIYETGII
ALIQKEWGNENDI
>TDE0149 DNA-binding response regulator
MKIIIVDDDCLVVSSLKTILKANGFDIIATGSNGNEAITLFNEYKPDILL
MDIRMQNMTGIEASEKILAEHSDAKILLLTTFNDEEYITKAINFGCKGYI
LKQNIDSLVPALNAVGAGSIVFDSEIISKIPQTKPARSQFKEDLNDRETD
ILELVADGLNNKEIANRLSLSEGTVRNYVSSILEKLNLRDRTQLVVYYYT
K
>TDE2486 hypothetical protein
MPDKISHILISKKYLEKINDIKGKEYFYYGAIYPDLYDLSKKEEYYKSHF
IQKGSGYNSKLLKNFIKKHSYAPPSFLKGVDFHIFTDHFVSKNLNKYYSF
YTEIKNKTDIELSKILSDYALYHCRNEKIIPVILKEENDEQIQSSFYEFE
KYRKTDIGDISSVNNNYLEFIDEIIDKYLKQNLN
>TDE1664 conserved domain protein
MIKKIFFVAVCSLLVVSAWAQAPSIVGTDYVRPAIHYVEEGTNYVNSDVF
FKLRSTDKETGLDFVEFALNGADFMRYKNPFQLLEEGKYDISYRGFDNSG
NLELPKTLSVIVDNTAPDTMIKTTAPLYNDGVVVYCSADTKWYVSAADIV
GGSGVAAGYMGTDLNSLKISGNGKESEQTYVSLDGEGPVNLYYTAIDNVG
NLAPIKLLAVTIDRTAPVVSIANSNRLINKDEEYMVFPSDRVVDEEGRVI
VSTSETVSFAAKDDLSGVDAIYVKVNDGEYTKYVEPIRFTQNAVYKIEVK
AIDNVGNVSEPVMYTFYVDQITPNSEVDIIDRSGNLLPATTPANAQ
>TDE0246 transcriptional regulator, TetR family
MQVLKEEVKDRILTAAEKVFYEQDYRSAKLTDIAEQADIPVALIYTYFKN
KEGLFDEVVAGVLDKIIKMMEDEEKMEAGSPYERFNRGGASQLPKLLKNR
IKLIILIDKSSGTKHENAKDMWVKRLEQHIKDGLKRYSKTKHDPMLAHIL
ANNYVEGLMEIARHYKNEKWAEDMLFVLNKCYFNGVESL
>TDE1719 transcriptional regulator, MarR family
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQEDGIP
IGSLSIKCGLAITSLTTMLERMENQGLISRVQSETDKRKILLFLTEKAHA
LKDEYNSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEEWQKS
>TDE0332 transcriptional regulator, TetR family
MAKFKRKTKEERTYEIIEAAKKVFLKKGFHNTTMEDIVAATSLSKGGVYQ
YFKSTKAIMFAIMQEGNYFRYRRNEEIFSSAKKIDDPYEIVTQALEAKLF
DNVPEKRLYLMFLAEILYDKEYETLFWKLENQAHKFINENLEHLFKEGTF
EGKKIKYKTNKTGRLYSRLFNGILIIYELFEDKTVFDEGKRELHDFLYSC
VKKSFTIE
>TDE1330 conserved hypothetical protein TIGR00244
MRCPHCGNCDDKVMESRTLAQGDCIRRRRECLACGYRFTSYEHIEEKPFM
VIKKDGRREPFDRKKLEKGIERALEKRPVSLNSIENIVTEIEDQAVLNSG
LNKEIETTVLGEMVLSHLYSIDKVAYIRFASVYKQFSNLDEFVNEVKKVR
K
>TDE0542 acetyltransferase, GNAT family
MLHLEKVNGKNIWDILKLQVSEAQKSFVAANDISIIEAYITITANGYAFP
FGIYDNETPVGFLMIGFDVHDDWIDAPEIAKGNYNLWRLMIDKAYQNNGF
GKDAVKLALDFVKTFPCGKAEYCWLSYEPENQVARKLYSSFGFVETGDTD
GEELISALKL
>TDE2683 fliA, RNA polymerase sigma-27 factor
MANTDYENIPEEELWDKYKKTSDPKIREYFILKYAPLVKYVAGKVGIGMP
TNVEFDDLVGYGVFGLLDAIEKYDLDKNVKFNTYAVNRIRGAIFDELRSI
DWVPRSVRQKSREIEETIADLEARLGRSASNEEIAYAMGLDIEEYNSLLL
KISATSVISLTDLRFSNDDSEEFSVGDIIEAPSSLNPDVIVEREDIKRVI
VEAIKELPDREKKVLIMYYYEDMTLREIGEVLHVTESRVSQIHTSANIKL
RAKLSNVTKGIK
>TDE2165 hypB, hydrogenase accessory protein HypB
MQEFKIIEIKEGVYETNNAHAEKLRKKLKEEKKFLLNLMSSPGSGKTTLL
KASIEALKKDFRIGVMEADLDSAVDAETISQTGAKVIQLHTGGMCHLDAD
MTEQGLEALGIADLDLIFLENIGNLICPAEFDTGALKNVMILSVPEGDDK
PLKYPPMFQVCDVLLITKMDASSFFNFSLEKCTGYVKKLNPNIKIFPVSA
LKGDGMEAWIEWLRSAVKGI
>TDE1287 mfd, transcription-repair coupling factor
MPQPLIDSLQSSIRSWKDMKNAFDEIDENSYPYNITGISGGLFGFFLTEY
LYKTRKPVLVVVPTEKEAEAVRADLDFSGIENFVLPWWGSLAYRPISPTA
PVFSERAEVLIRLLESGNESYTKNKPPVFITCQRSFLTPVPPADYLKQNK
VEIAAGSSLDILSLAELLSLWGYIRVPRVSVRGEFALRGEVLDICLASNS
GSEKTAYRIQFDFDKVEKIKSFDIASQGSLEEYKKINFYPVKEVIWNDER
IDCLEKNLKTYSEFSENILKIIDALKEYKTFEGEEIFYPLAFQKSSSVLE
YAELNDIPVFYSDYDRQKNSSEILLREYMGLYKKTKTQFDENEKRKALIS
EYPEPQRILLQFESNVQKYNKSIYFRTLAEQEDKNKTLKFKTDPPRSFFG
NIVYLREELNNLLNDDWSIFVFAESDNQALRIEEILHEDRIKILPYNLSG
GFGIPDLKILVIHENEIFGRRRRIPKSVKTAKSSVIDTFIELNPGDYVVH
VNYGIGKFRGIERVKILDTERDYINLLYANDETVFIPIEQADLVQRYIGN
EGEAPHLDILGSKSWENRKNKVKKSVEDIAAKLIDLYSKRKASTGFAFQK
DDEWQTAFEAAFPYEETDDQLTCIAEVKEDMEKPVPMDRLICGDVGYGKT
EVAMRAAFKAVMSGKQVAFLSPTTILTEQHFETLDKRFKNFPVKLARLSR
FVPKGEQKKVLEKLKKGEVDILIGTHRIIQKDVVFKDLGLMIVDEEQRFG
VKDKERLKQMKHNVDCLSLSATPIPRTLHMSLLKIRDMSVIATPPQNRKP
VETVIAEFNAEKVAEVIRRESERGGQVFYLHNRVESLDETLFMLQSLLPE
IMIETAHGQMSPNQLEEIFERFSLGGFQVLIATTIIENGIDIPNANTIII
DRADMYGVSQLYQLRGRVGRSDKKAYAYLLYPDDKALSEIAMKRLQVISD
FTELGSGFKIAMKDMEIRGAGNLLGREQSGDIYSVGFDLYLRLLDEAVQK
LKNQDYEPVQESVIELEYSGFIPDSYISSPETKMEVYKKIAAVKVQGDLD
RVYSEILDRFGPAPSEVESLLALSEIKIICNHLSIASLKERKAAVRIEFA
RVSKISVDKLLRMIKESAGRVSLDPKAPNVLILQTGKIGLKEKSEFIREK
LGSLM
>TDE1657 nusB, N utilization substance protein B
MSVGRRRGRILAFQALVAWDVGGAVLDDLLNFSWQNEDSIKDPNGYLFPK
MMVLGTIENITEIDKVIQENLDNWVIDRLNSVDKAILRLSVYSLIYQKDT
PPPIVIDEAINLAKDFGTDDSYKFVNAVLDSIKNKS
>TDE2426 nusG, transcription antitermination protein NusG
MAKAWYILHTYSGYENKIERTIRTLIEKGIISADFVTDIKIPEELVIENK
GGKKRNVKRKFLPGYMLVEMNLPDLGWKSVCSEIRKIQGVTGFLGTAGNE
KPQPISPDEAKEILQKTGEIKGDKNIRVIQNFSEGQHVKIIEGAFASFTG
VIDEVMADKNKLRVMVAIFGRTTPVEVEMSQAEII
>TDE2579 recG, ATP-dependent DNA helicase RecG
MLISEIQGPLTNIAGVGAAAVSQLKRLGVENAGDLLRLFPRDWEDRSKIN
VLLDWNKFQKIHVEITVAGHEWFGFGKMKTLKLIVADKNGMTASLICFNR
PFLEKSFPVGARAFVYGSFYRKYGEIQSSAFDLEKPENMQSKILPVYPLT
SGLGQAKLRKIIASALKMYAHGIDSELPESILQKYGLPPKQEVLFMLHTP
KSMAEVEKGRYALIFEEFFLFQYAIGMRSIERRGRLPNLEDERNIDKTVK
KEPVLRPLQSSLLERLNFKLTQDQLSVCAEINEDLDGPNPMARLMQGDVG
SGKTLVAFLACLKVIEQGGQTAFLAPTELLARQHAENAARLLEPLGIRLA
FLTGNTKAKGRSRLLQELQKGNIDLIIGTHSLFSQGVQYKNLRLAVIDEQ
HRFGVLQRSAIIQKGAESNEEKRSPHLLMMSATPIPRTLALSIFGDLDIS
TIKTMPPGRKPIITYVAGEDKAERVYNFIGQEILQGRQAYFVYPLIEENE
DLSLKSAERMFEELKTGFPNHSLALIHSKVAEEEQKRIMEEFRSGKLNIL
VATSVVEVGVDVPNATCMVIEHADRFGLSALHQLRGRVGRGDLQAYCFLI
YGKKITEDGRARLTVMKETNDGFIIAEEDLRLRGPGDIGGVEQSGYHLGF
TIADPARDFKILQEARSAAFELLEQTKF
>TDE1503 rho, transcription termination factor Rho
MTIRKRKTLPQVSEDTLFDTGINSDENLGLSQSDVQADDPSLSPANEIQA
AVEQTRIEQNNEADDEVLEKKVVVRSRGRKKTESFSDEVETKPAKRTSVT
AKKRIPKDIQEEKEEVPPASDSSFKIIINDLTKMRMHDLRDMAIKYGVPE
DELSLMKKQDVIYHILKNHTNQGGTIFASGSLETLPDGYGFLRSPQNSYL
TGTDDVYVSPSQIRLFNLKTGDTVYGQIRSPKEGERYFALLRVETVNFDE
PAKSQRRIPFDNLTPLYPREKLNLETTTQEISTRIMNLFCPIGKGQRGLI
VAPPRTGKTIMLQKIANAITANHPEVYLIVLLIDERPEEVTDMERTVNAE
VISSTFDEQATRHVQVAEMVLEKAKRLVEHKRDVVILLDSITRLARAYNQ
TMPTSGKVLSGGVDSNSLHKPKRFFGAARNIEEGGSLTIIATALIETGSK
MDEVIFEEFKGTGNMEVNLDRKLSDRRLFPAINIKRSGTRKEELLLTEAE
MQLMWILRKFISSMDDADIIEFLIDKMNKSKNNEAFLKSMNAGLAQKE
>TDE1027 rnc, ribonuclease III
MFPIKSGLEPKRKQELLEFQKQAGLKFKDLRLLDLAFHHRSFSNEHNNFH
ANNERLEFLGDSVLGLVAASYLYKSFEDRPEGELAKIKASAVSEDALSKT
ASKLNISNYLVLGRGEEMSGGREKKAILADALEAVIGAYYIDSGFKAAQK
FVLRLLESTIHSVLEKKFISDYKSLLQELVQKKFKTVPKYELKKASGPDH
DRTFWFSVSINGKVYGPLSGKTKKEAEQSVAKVAYENLCSESTVSK
>TDE0791 rpoA, DNA-directed RNA polymerase, alpha subunit
MARKNLLKGFKKPKGLEFAQQESTESYGKFTASPFETGFGTTIGNCLRRI
LLSSIQGYAISAVLITSHDADGVPHTISSEFENIPNVSEDTLEILNKLKQ
IRLRLSDESEQGDFHFEFKGPASITSKDFAVEGQLEILGEPFYVMELMKG
ANVSFDVQVDFGRGYVPAEVNEKYIEIVGTIPMDAIYGPVLKVSYAIEPC
RVGQRNDYDKLILEIWTDSTVRPEDVLGEAAKIAKDHFSIFINFNENDYL
GEDEDDNEEAVIKQLLATSINTLDFSVRAKNCLDSAGIKTLGELAQKSED
EIESMRNVGRMTLNEIHAKLAEYNLRLGMTDYSHLKNTIKVSRQKEETDE
A
>TDE2421 rpoB, DNA-directed RNA polymerase, beta subunit
MFARGQKIDRRYYGKDVPNFMELPNLIDIQIQSYNKFLNKEKKTDETEIE
GLESVFHTTFPIESTNEDMALQYLSYSLDYDSIKFSEIECKQKGLTYSVP
LKAEIDLFFKETKEIRRKNIYMGDIPLMTERGTFIINGAERVVVSQIHRS
PGVIFSHEKGVYSSRIIPYRGTWLEFEIDQKKELIYAKLDSKKRILGTIF
LRALGYDTREKIIDLFYKTKTAKISPDRTEYEELIGQVLARDVYVKGEDG
EKRKMHQAGEKIHPHNIDDLIQNDVKKITIIDFKGKDSLDSQIIINCFER
EEIKYTPDPAVNDEPTVEDALNAVYSVIRPGDPITYENAKEDLHNMFFTA
RRYDIGKVGRYKLNKKFDYSDDVKGTTLIEEDIFKTMKFLIKVYIGEESI
DDIDHLGNRRIRSVGEIMTDVLKKAFSRMERIARDRMSSKEMDTIKPKDL
ISIKPIVAAIKEFFGASQLSQFMDQVNPLAELTHKRRLNALGPGGLSRDR
AGFEVREVHYTHYGRMCPIETPEGPNIGLIVSMANYARVNEYGFLEAPYV
KVVNGVATREIEYLSAMDEDKYFIGQVSSAIGKDGKINTDQVSCRKLGDY
TSISPKDIQYMDVSPKQIISVSASLIPFLEHDDANRALMGSNMQRQAVPL
VFPEPPRVGTGMEKKCAYDSGVLVKAKRSGKVEFVSSDTIIIAPEKGKNK
EDKDEYTLLKYQRTNQETCYHQRPIVNVGDTVKAGQPIADGPATYNGELA
LGRNILVGFVPWNGYNYEDAILISRRVVKEDMFTSIHIKELSTDVRETKL
GAEKMTCDIPNKSEKSLDDLDSEGIIRIGSKVKPGDILVGKVTPKSESDT
TPEFKLLNSIFGEKAKEVRDTSLRVPHGTEGTVIDVQRLKRDQGDDLSPG
VDEVVKVLIATKRKLREGDKMAGRHGNKGLVARILPEEDMPYMEDGTPLD
ICLNPLGVPSRMNIGQILESELGLAGLKLNEWYESPVFESPSMEQIEAKL
KEAGYPTSSKVKLRDGLTGRLFENEVFVGVIYFLKLAHLVDDKMHARSTG
PYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAANTLQELITIKSDDMH
GRSKIYESIVKGEPSSSAGIPESFNVLVQELRGLALDFTIYDAKGQQIPL
TERDEELIKREKTSTNF


# Treponema pallidum

>gid:18  TP0019  transcription elongation factor (greA)
MVSGRGLVVTAKMLNAKKKELQDLLDVRIPENSREIGRALELGDLRENAE
YKAAREEQTRLNNMVTRLQEEIERAQVFDPTTVVAGRVSFGTVISLKNHT
SGEDETYTILGPWESAPERGIISYMSPLGSNLLNRKTGEQLAFTVGEHEK
VYEILSISAAEI
>gid:86  TP0082  formate hydrogenlyase transcriptional activator (fhlA)
MHRLREILPAHLPIRKETSEHLSTRVSCARLYPIXNARKRIRKTNTIPCT
RHAHRLHAENCTDMPFSSILGPHELFGLSCTRALPPAAEKSLEMILDALY
EIARYELAVVLSFESSQILRVRKARGPLYTPRLQHHTIDLTKRQDLARIL
SQKSPYLFDPTLAHTDTYTELIPMPQNHSCLIAPLYIDDTPIGMLTLDHR
LCEQFTPDVVRFITTLSKLISLAVAQTDASETLSQKSHALLTERNALLAP
QSPAFKNMIGTSPAWTRTLDAIKLVAASDLPVLVCGETGTGKELVARTVH
QLSTRSDKPFVPVNCSALVHSLAESELFGHEKGAFSGAVGTHRGRFELAH
GGTLFLDEVGDLPLELQPKLLRVLQDGVFERVGGERSVSVSVRIIAATNI
NLSEAVTQGKFREDLLYRLDVFPLSLPPLRERAEDVALLAEHFIQKIKTR
PGFERTQLSPSAFKKIFSLTFPGNVRELRNLLERAALLARGDTIGAEHLV
CRTPESGTQTTVYPREHTEVSESVQPAIPLCIRDSSCMVRCTQGKKEETT
LVVNFHQAQRAAIQAALDASNGKIYGANGAAEILGLKPSTLQSKMKKLGL
>gid:96  TP0092  RNA polymerase sigma-24 factor (rpoE)
MYEQLVPVLYRVAYNVVREEDIAEGLCHDAFIAMTEKRMEFPSLSDAKYW
LIRVVKNASLNYAKRRVRERHSCEQASREHVCEPDTGELRLLRIETIEQV
RAALDRLPEHLRVVLQLREYGDLNYKEIGRILGISEGNVKVRVFRARERL
AKYLGETDAYLS
>gid:97  TP0093  T. pallidum predicted coding region TP0093
MRTCPDCAAWCAYVDGEGSQLQRREMCAHLQGCTHCATCVAHYRAMRSLV
KHADRVSSRDFTMAFPYLRVRHRVASCMPRPWWQARSSPLSAAGPVRAAA
LAVAVASLCVCTLLLTHIVERRPVSRAGEASFTPIVPMRVRAPVGYARGV
KVFGPAVSANSNVLRKPAAVFTVCAFAQLYGSDPAYEMETVPVRLSVIPV
PSYVLNASKAQFFSP
>gid:118  TP0111  RNA polymerase sigma-54 factor (rpoN)
MQQLVQQQRLVLNQRLVHGLCLLQLSRGDLKTEVLRAVQRNPLLEIRPSS
ARRTGKACYLSLGDRRERMRARDRFQQLLENQPDKQVDNIRAVLREQVFY
QKHEAIVLDLACAFIQMLDDHGFFSISPAIFQNMCGSMPTALQEKIPQAI
ALIQRLEPQGCAVFNFKESLAVQARLRFERFSDPLYRCVINLLTHHSELL
FCSDNMCDGRVSVHALTTQINSMGLCVQKVSSNDVKDILLLIKELHPFPG
KCVSNAQRADTNMLLEPDVLITKTAHGFVTQINCTGIPTVVFRNDYCMHS
KAAEKNHALKACMHDALSLVSMLSYRERTLLDIAKTIVHYQCGFFDHGPA
KLTPLRMTDVAHRTGLSVSTVSRIVRDKWLQYGSQHFSLRYFFSPRVLST
EEYRDRSSLGQNYPSSPHSKVSVKYRISRLIQEVRTQRISLSDRRIAQLL
GEQGIKCARRTVNKYRSELRTCSSS
>gid:175  TP0167  cation-activated repressor protein (troR)
MSLVSDIAAENYLKTVVKALARSRRERVGTGELSRLLHVTPGTISTMVKR
LEKGGYVQRTHRLGCTLTRKGAVFGSAVLRKHRLLESFLSQVLCLEAGVV
HKEAEMLEHACSDELIDVIDRYLQYPTRDPHGQPIPRKDTLLDLYVEDDV
PGV
>gid:221  TP0212  DNA-directed RNA polymerase, alpha subunit (rpoA)
MPRRNLLKGFKRPKVLEFLSENSSECYGKFTASPFETGFGTTVGNCLRRV
LLSSIQGYAVTGVRITSFDADGVAHFISSEFEQIPHVREDTLEILNNFKR
LRFLLPQGAESSTFTYEFRGAVSLTGKDFAKKFQLEVLSQDLLIMEMMDG
AHVEVELHVEFGRGYVPAESHDRYADLVGVIPVDAIFSPVLRVRYDIQSC
RVGQRGDYDQLSLEVWTDGTVRPEDAIAEAAKIIKEHFTVFVNFDETALD
LEDEPEEDDPAVLELLNTKIADVDFSVRARNCLLTMGIKTLGELTRISEQ
TLANTRNVGKKSLSEIQGKLQEYNLRLGMADYNHVGVVSRLMRQKEEIDE
A
>gid:226  TP0218  sigma factor SigB regulation protein, putative
MIRRRLAIVKAGSFALLALFFSIFLRFLSPRYSFLGRFVSARDMALLISR
YEHLPELSSRDRALLVGFVFMIFALALTEIQRYAHGRIRLVVYRQTETRL
FEHFITLLRFCYRNEQLVAAFQEVLEYRADCAVLLMDTISNRVIYNSAAR
FVSDTRTYDLVLHKFSMDYTWHWSDGIYFFDDDLCLMSDRRRARGVCLSS
GELRLFIVCRFIRAVEREVISLLFKEFEEYLNRKRNMSTLLLYSHVSQEW
AMMARVQRALLPKALPHTKEICVGAFYQPLVNVSGDYYDVISIDEHLFLF
VIGDVSGKGLAASLVMGVVLSTIRIVEDKKNLPEILYAVDRAVKRMHLHD
KYTTLFLGLIDTAGMNIRYINASMESPLVFTQAGEAHEVYHLHSNCPVIG
IVDLPPIQIHERTLCPGDVMVMVSDGVVEVVNAQGVELRDADEYLHILER
HVGEHPAQMAQSIAALALNFSADRTTHDDMTIVTVQVKR
>gid:227  TP0219  sigma factor SigG regulation protein, putative
MGLLFFSYLFVAVFVFDVFCLKFYTRRAYALLANIALVSGVASFFLSLSL
TAVLYGKMNIQAFLFKIALIFFTHASYLFSDMAYQLPYFKKNKRFFLCNT
TIHLFGILIIIFGMGPFKWNVLVSFKFYQNYLFSSVSGIVLYAALFFLII
PCVTFATLVKKAFMMKSIAYRQQLLFLAGAVALGFITWVIILFLFAVFPW
VFVFFPLGGVFIVLFSQWAFASTGIVSFKEVVFALSRFVLCTVGFSCTAG
YISVFWVHRFSTLDMQFVFGFFIVYALFALRDYAFDACSVFFGEIADSGQ
KLAAELQALDYTAKPAQVLRTFMDTLRMRIACRGLTFLLADEAGVFKTVY
SDFEEMATHEMEHQSLQYFFNQDVLMIRKSDPVIDHARQAIRTDILHFFD
ITHAQMIVLIREAQKLIGCLCFGMKNNGVEYSNHDQHVLEKLYSHFVLVS
YYLQNIAKQDVVITVDKELKMSHQIIESIQRKRDFIQDASVEVDSIAYSA
HQLGGDFVDFIKLSEKRYLLVIGDVSGKGLAASMSMVILKSVLSTFLRGL
CLEETAVFTTFIEKINRFIKDNLPCGTFFAGVFCILDLATHTLYYANCGI
PLMSMYVASYKNVVEIQGEGRVLGFVKDVMPFLRVRKVQLGQGDVVVFST
DGMVEVQNLQRERFGNERVDRILQESHGLPVSQITRTIYARLCEFMARDM
QDDVTVLAIKCLGPR
>gid:250  TP0236  transcription antitermination protein (nusG)
MAKEWYILHTFSGREARVERAVRMLVEHARIPTNVIFDIKIPEELLTEVK
DGKKRVVRRKFFPGYLLVEMDLPEVDWRIVCNEVRRIPGVSGFLGSSGNA
KPQAVSADEARRILQKAGEIKGDRTPRIAQTFLVGQQVRIVEGPFATFSG
EVEEVMSERNKVRVAVTIFGRATPVELELVQVEAL
>gid:255  TP0241  DNA-directed RNA polymerase, beta subunit (rpoB)
MSARVCKTHRVYVGRDVRNFMDIPDLIEIQLRSYDTFLHGARNTPSGADT
LISGTREELGLEDVFKTTFPIESSTGDMTLEYQSYSLDEKNIKFSEAECK
QKGLTYAIPLKALVDLRFNNTGEIRRKDIYMGDIPKMTERGTFIINGAER
VVVSQIHRSPGVVFSHEKDKEGREVFSSRIIPYRGSWLEFEIDQKKDLIY
AKLDKKRRILGTVFLRALHYETREQIIEAFYAIEKTPVCQDRAEYELLTG
KILARSVTVENEQGETRVLYKAGEKIHPHVIDDLLQNGICEVYIINLEAE
GSLRSAVVINCLEREEMKFSKSGAQDELSREEALCIVYSALRPSDPMTMD
AAEKDLQTMFFSPRRYDLGRVGRYKLNKKFRSDSPTTECTLTLDDIVNTM
KFLIRMYSGDAQEDDIDHLGNRRIRSVGELMTNTLKTAFLRMERIAKERM
SSKETETIKPQDLISIKPIMAAIKEFFGASQLSQFMDQVNPLAELTHKRR
LNALGPGGLSRERAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSMANYA
RVNGYGFLEVPYVRVRDGVVTKEIEYLDAMDEDRYYIGQDSTAVGPDGVI
RVDHVSCRHRGDYSTRSPKDIQYMDVSPKQIISVSASLIPFLEHDDANRA
LMGSNMQRQGVPLIFPEPPRVGTGMEEKCAYDSGVLVKAKQDGTVAYVSS
EKIVVCSAAASGEEQEVVYPLLKYQRTNQDTCYHQRPIVHVGDRVQVGDA
LADGPATYRGELALGRNILVGFVPWNGYNYEDAILISHRVVKEDMFTSVH
IKEFSTEVRETKLGSERMTNDIPNKSEKNLDNLDAEGIIRIGSKVRAGDV
LIGKITPKSESETTPEFRLLNSIFGEKAKEVRDSSLRVPHGVEGTVIDVQ
RLRRSEGDDLNPGVSEVVKVLIATKRKLREGDKMAGRHGNKGIVARILPE
EDMPYLDDGTPLDVCLNPLGVPSRMNIGQILESELGLAGLRLDEWYESPV
FQSPSNEQIGEKLMQAGFPTNSKVMLRDGRTGDYFQNPVFVGVIYFMKLA
HLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAANT
LQELLTIKSDDMHGRSKIYEAIVKGEASSPTGIPESFNVLVQELRGLALD
FTIYDAKGKQIPLTERDEEMTNKIGSKF
>gid:256  TP0242  DNA-directed RNA polymerase, beta' subunit
MKDIRDFDSLQIKLASPDTIRAWSYGEVKKPETINYRTLRPEREGLFCER
IFGTTKEWECFCGKFKSIRYRGVICDRCGVEVTHFKVRRERMGHIELATP
VSHIWYYRCVPSRMGLLLDLQVIALRSVLYYEKYIVIEPGDTDLKKNQLL
TETEYNDAQERYGGGFTAGMGAEAIRTLLQNLDLDALVAQLREKMMEKGA
KSDKRLLRRIEIVENFRVSGNKPEWMILSVIPVIPPDLRPMVQLDGGRFA
TSDLNDLYRRVIHRNSRLIRLMELKAPDIIIRNEKRMLQEAVDALFDNSK
RKPAIKGASNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLWQCGLPTKMALELFKPFIMKKLVEKEIVSNIKKAKMLVEQESPKVFSV
LDEVVKEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIRLHPLVCKPFNADF
DGDQMAVHVPLTQAAQMECWTLMLSNRNLLDPANGRTIVYPSQDMVLGLY
YLTKERSLPEGARPRRFSSVEEVMMAAEKGVIGWQDQIQVRYHKCDGQLV
VTTAGRLVLNEEVPAEIPFVNETLDDKRIRKLIERVFKRQDSWLAVQMLD
ALKTIGYTYATFFGATLSMDDIIVPEQKVQMLEKANKEVLAIASQYRGGH
ITQEERYNRVVEVWSKTSEELTSLMMETLERDKDGFNTIYMMATSGARGS
RNQIRQLAGMRGLMAKPSGDIIELPIRSNFKEGLNVIEFFISTNGARKGL
ADTALKTADAGYLTRRLVDIAQDVVVNEEDCGTINGIEYRAVKSGDEIIE
SLAERIVGKYTLERVEHPITHELLLDVNEYIDDERAEKVEEAGVESVKLR
TVLTCESKRGVCVCCYGRNLARNKIVEIGEAVGIVAAQSIGQPGTQLTMR
TFHVGGTASSTTEENRITFKYPILVKSIEGVHVKMEDGSQLFTRRGTLFF
HKTLAEYQLQEGDSVQVRDRARVLKDEVLYHTTDGQTVYASVSGFARIID
RTVYLVGPEQKTEIRNGSNVVIKADEYVPPGKTVATFDPFTEPILAEQDG
FVRYEDIILGSTLIEEVNTETGMVERRITTLKTGIQLQPRVFISDESGNA
LGSYYLPEEARLMVEEGAQVKAGTVIVKLAKAIQKTSDITGGLPRVSELF
EARRPKNAAVLAQISGVVSFKGLFKGKRIVVVRDHYGKEYKHLVSMSRQL
LVRDGDTVEAGERLCDGCFDPHDILAILGENALQNYLMNEIRDVYRVQGV
SINDQHIGLVVRQMLRKTEVVSVGDTRFIYGQQVDKYRFHEENRRVEAEG
GQPAVARPMFQGITKAALNIDSFISAASFQETNKVLTNAAIAGSVDDLCG
LKENVIIGHLIPAGTGMRRYRQVKLFDKNKRDLDVQMEEVIRRRKLEEEA
LAQAVAGMEGEPEGEA
>gid:268  TP0254  transcription termination factor Rho (rho)
MKVSVGTVVGQGELGLEEGIVGNQIVSEDSAADVGECDAYGGRKKLVIRS
RSRRRVVTPKALEVEKRPRRALRFKQNFCPEDAETSESSADVKGRARLLI
DDLTEMGMHALRDFAVQRGISQEDVVVMKKSDIIFHVLKNHTENGGVIFA
SGSLEILPDGYGFLRSPQNSYLPGSDDIYVSPSQIRLFNLKTGDTIYGQI
RSPKEGERFFAMLRVETVNFEEVAKVQDRVPFDSLTPLYPREKLNLETRT
EDISTRVMNLFCPIGKGQRALIVAPPRTGKTILMQKIANAITQNHPEVYL
IVLLIDERPEEVTDMERTVDAEVISSTFDEQATRHVQIAEIVLERAKRLV
EHRKDVVILLDSITRLARAYNQTMPTSGKVLSGGVDSNALHKPKRFFGAA
RNVEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNMEINLDRRLSDRRL
FPAVSIKKSGTRKEELLLTEEEMQRIWVLRKVINPMDDAEIVELLIDKMR
KTKNNEAFLRSMNTGAFSS
>gid:289  TP0271  chromosome partitioning protein (parB)
MGKDKLGKGIDALLQESSDRYDVRDSGGVQTVHYLDPTLLQANPHQARRT
FAQESLEELAASIREHGVIQPVLAEKNQDGSWVIIAGERRTRAAILAGLN
RIPVIVRTCDHEKKLAIALIENVQRENLNPLEEARAYQHIMDLGNLSHEE
LAQRVGKNRSTITNALRLLKLPPEVQQSLSSRTLSAGHARALLSLTDMQL
CVSVAQYVVTHALSVRAAEECVACLNRGGSLHDYAGARAHTAASSPSPGG
SATDITRLPPSSPSTDAQLDARIRNADIADIEQQLLEQLGTKVRISGNLQ
RGRIEITYFSQAELERLYGLLKAH
>gid:363  TP0344  transcription-repair coupling factor (trcF)
MRGILHSWNELQHALRSLRAARFPYRVEGCTGGLRSYFFGEYVRTCCAHI
VLVVPTEQDVAAVCTDLAHAAVPTRVLPWWGSLPYRPVSPNAHVFSHRVE
ALCALAQRDATAPCAFVFTQRALLTPVPPLDYVRTLKRSFRVGEHIEIHT
LAAQLMQWGYARVDHVSACAEFSLRGEILDIAAAAQAADNTQAYRIVCDF
NTIERIHILAVSTCAVLQEVSACTLYAAKEILWSEERIAFLHQNLQKLSE
CPAHCVPCIEELTHRKTYEGEEMFYPLCFERPTCVLEYFRHSPSPPSVFY
LDYERQHNGARALQDECRNLYHKMQLAHEHVPARWYPQPEHIVLDFSAVC
ALHLHTVYFTHFFPQLPACESICLASDPARSFFGNIPYFKEELLRLSKDG
WHVFVFAESEQQALRIRALVKGCDVTVLPCALSAGFSIPALKILIVQEGE
IFGRRRKTPQSVQRARSTPIDTFVELNPGDYVVHAQYGIGLFKGIERIKT
AQSERDYVNLLYAQEETILIPIEQAHLVQRYIGNEGNKPHLDSLGSKSWE
TRKARVKKSVENIAQKLVELYSLRKTTRGHAFPKDDEWQYAFEAAFPYEE
TDDQRICIEEVKQDMQEAVPMDRLVCGDVGYGKTEIAMRAAFKAVMGGKQ
VVFLTPTTLLVEQHFRTICNRFKHFPVRIEKLSRFVPKSEQKDILAKLAH
GDIDLIVGTHRLIQKDVSFKDLGLMILDEEQRFGVQDKEKLKQMKTNVDC
LSLSATPIPRTLHMGMLKIRDMSLLTTPPEGRLPIETVIQQFDPNLVATA
IRKELDREGQIFYLHNRIENLESVKCMLQKLVPELSICVAHSLMGSEELE
DIFERFYQKTFQLLLSTTIIENGIDVPNANTIIIDRADMYGVSQLYQLRG
RVGRSDKKAYAYLLYYHDVALSDLAIKRLQVISDFTDLGAGFKVALKDME
IRGVGNLLGKEQSGDIYSVGFDLYVQLLEEAIERLQHAPNEQRIETVIDL
NYRGFIPHTYIAADEIKMELYKKIAAAHTHEELERIRTETITRFGPIPEE
AAGLFTVAEIKVRCEKLAILSLKETHESLLIEFDKVCDTAFKKILRLVQT
SNDRVRLDAKQPNMLILTSDAIEIKEKGIFICEILKRLES
>gid:400  TP0380  DNA repair helicase, putative
MTSVPKPLIIQADRSILLDVHAPEAVAARKALVSFAELEKSPEHLHSYRL
TPLSLWNAASAGFSPQMIAQTLTRFSRFTPPQTVLDWVVDIMSRYGKIRL
REDTTHSTLLRLQVRDAHIAREIAASKSLASHLSPTTACLQDGPLPTPDT
ARIAQPDTTPQVQGAQTGCSYDFLLPRLHRGTVKQLLLRHGWPVHDEVPL
REGTPLSLRLRISPASCPPPSTAYPCCHTPGTPSFVPRDYQWEAADAFVG
NRTQGSGFGVVVLPCGAGKTVVGLLVMGLLQTDTLILTPNSAAAQQWKRE
LCEKTDLDGTSIGIYSGECKEIRPVTIATYQILTWRAHADAPFSHFRLFM
ERSWGLIIYDEVHLLPAPLFRITAELQVVRRLGLTATLVREDGCAQDVFS
LVGPKRYDVPWKDLEARGWIARVRCVEVRVTMDRSLQYQYMTAPVRLRHR
LASENEAKVAVVQRLLRAHAGAPTLIIGQYVQQLLHLAHVLQVPLVSGRQ
TYAAREAIYQRFREGTLQVLVVSKVANCALDLPDASVAIQVSGTFGSRQE
EAQRLGRLLRPKICDAHFYSLVTEQTVEEDCALRRQRFLVEQGYTYETLR
VSEVHE
>gid:451  TP0431  conserved hypothetical protein
MLLIDVGNSHVVFGIQGENGGRVCVRELFRLAPDARKTQDEYSLLIHALC
ERAGVGRASLRDAFISSVVPVLTKTIADAVAQISGVQPVVFGPWAYEHLP
VRIPEPVRAEIGTDLVANAVAAYVHFRSACVVVDCGTALTFTAVDGTGLI
QGVAIAPGLRTAVQSLHTGTAQLPLVPLALPDSVLGKDTTHAVQAGVVRG
TLFVIRAMIAQCQKELGCRCAAVITGGLSRLFSSEVDFPPIDAQLTLSGL
AHIARLVPTSLLPPATVSGSSGN
>gid:478  TP0458  conserved hypothetical protein
MDQAEPCTLHGAPAPDLALLEAILFVEGVRLSYACLARKLGLSEQAVGEC
VARLGEALASGARGGGGLELHCNEQGVALLPAATVRERLATLYGKRSEGR
LSRAAMETLSIVAYAQPVTRAEIEAIRGVGADTMIRLLSERRLICEVGKK
DIPGKPAQYGTTEEFLTAFRLRSIADLPKLDEEEQRRFELTR
>gid:481  TP0461  T. pallidum predicted coding region TP0461
MLQAAACGAMRGGVLEYTGKMEGMGVRVERVRCEQNLSKTAFARELGIGV
EELDAIERGTMPLSRDLTLLLCVVFAVNRLWLESGEGEPFSASAVSPQET
VQPEEEAREPPIPPPRWRG
>gid:515  TP0493  RNA polymerase sigma-70 factor (rpoD)
MMELSRTPAVMRLLEYAREKKAITHDEVENILAHYGVETEELLHDVLDML
EQENIKVFSSEEEELEDEVFAGLKGPAADDGDGSFPLSTERVRDKLCDSS
RGARQNLLSNARNIALDDPVKLYLRDIGQEKLLTAEQEVMLSKRMEEGEG
IIKDIITQSGLLLPEFYHIGRSLSKKALAVLDPAESGRTRKEISEEMADR
RRLKQAYGEVLRSLYPEMRHYMAMKKRLDERGEPVTVLSSDEEVCKQRDK
LLSCLQKVDLQLEEIDRFSRKFLDTARKIREYKRRKDRHEKQLMIADLCD
MRKIGRGLAVPRQRAKLEETLGMSADCIQEIYTQIQKVTRRLRRIEYDFE
NTIDGILSMARAIHRGHVMLKKAKDKLINANLRLVVSIAKKYTNRGLLFF
DLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSISDQARTIRV
PVHMIEQINKVTRESRQLLQKFGREPSDEEIAQQLCWTVEKVKQVKSVAR
EPISLETPIGEEEDSSLGDFVPDADVENPSRVTERVLLKEEVRSILSALP
AREHEVLRMRFGLDGDYSQTLEEVGLYFDVTRERIRQIEAKALKRLRHPR
HSRRLKDFLDS
>gid:536  TP0511  transcription factor (carD)
MATRAWWSSLVFPLPLPTDFFPCLCYAGPMGKACAFRPHDHVVYPGQGVG
QVQEISEKTFKNETLLYYVIYLEESDMTVLIPVDKAQELGIRTIVKRKEA
ERALRFLSEDFDPSPLDWKMRYQVNLNLFKSGGILDNAAVVRSLYHRSKV
KELPIQERRLYDSAYRIFQDEMCFALGLRPPEVETLIHGYLEKAKENPVV
SGTVDVPG
>gid:696  TP0665  T. pallidum predicted coding region TP0665
MTINTCRETGLHRALKDYFSPRGSRQEVELRGSICDVVHPDGTIVEVQTS
GLGRLEAKLKKLLPYHQVMVVYPVSRRLYIRMLNEDGSERHYRKSPKEGS
FFQIYREIGRLHDLLDHEHLSLHIVYIHSEVIKVDDRKGRSRYKKPRIVD
RKLLEVQSSEEFRNKGSLAQPLLSKLPEIFCCDDLAQTGTGVHCRYALRF
LRRNGMATPHSKRGRTKLYRKEPPGDNRSPPPWQEPHGEGLAEKLSPGPA
R
>gid:721  TP0687  DNA recombinase (recG)
MLIGEIKEPVSVLKGTGKVVLAQLERLNISTIGDILSYWPRLWEDRTQEQ
MFSQWTLAHRLQVRVSVTAHCWFGFGKSKTLKLVVQDGQGCVAELLCFRR
NFLHFMFPVGSEAVVYGSFYEKDGLLESSSFDIEKIDCIEKKILPVYPLT
KGLKQMKLRMLICAAMDQWIGTVDSELPKPILEKYHLLTKRDVLLSMHTP
RTLDDVAKGKHSLIFEEFFSLQMTIGMRSLQKRGRLPLTQGESDQQSAIP
SVVSELSLLQKKLHRCLPFELTVDQKRVITEITQDLEREEPMARLIQGDV
GSGKTLVAFFSCLKIIEQGGQVALLAPTELLARQHADTAARLLAPIGIRL
AFLTGNVKSEGRAYLLEALVAGEINLVVGTHALFSKSVRYHDLRLVIIDE
QHRFGVLQRSALIQKGREGNPQGKTPHIIMMSATPIPRTLALSVFGDLDI
SIIKSMPGGRKPVITYIARKTKAEKVYEFVGNEIEKGRQAYFIYPRIHDI
GLTDLKSVQCMYMYLKNYFARYAVAMIHSKMTEEEQQRIMKYFSEGTVHI
LVATSVVEVGVDVPNANCIVIEHAERFGLSALHQLRGRVGRGDVQSYCFL
MHGDEMTECAKRRLKIMGSTADGFVIAEEDLKLRGPGDVGDTKNFEQSGY
SGFRVADPVRDYPILQVAREAAFELLRKEKGSSEAR
>gid:736  TP0701  DNA-directed RNA polymerase, putative
MIFPMQQLIEFQGNIYEITCAATRRAFQLAAVCDPVLDELGGKVVSAAAQ
QVFSGTVDYRIEPQELG
>gid:745  TP0709  RNA polymerase sigma-28 factor
MGNTAFEQQSEEELWLEYRRTRSAKIREYFVVQYAPLVKYVASKIAVGKP
GNVEFDDLVSYGIFGLFDAIDKYDPEKNIRFNTYAVTRIRGAIFDELRSI
DWVPRSVRQQTRQIEEAIADLEARLGRXATDTEIACALNIELEEYHQLLL
KVSGTSVISLADSKFGGDERDHVSVGDSIEAPASLNPDVIVEREEIKRII
AEAIRELSQREQQVLILYYYEEMTLKEIGKVLKVTESRISQIHTSANLKL
KAKLTNIKKGIR
>gid:775  TP0739  conserved hypothetical protein
MKVLDMGRHGLFLLLIFFMLVITVFAVFFGMKRDPLESSLSSDNILKVLF
VIEHENVPISSNVVAYYPATRRAAMFDIPHNMGLILQSLGRTDGIGSLYS
ERGIEEYKREVEKLTGINVPFSVVCSLDNFSKLTDLLSGLSVFIPTPIDV
HTERAGHVLLPSGSVSLDGDKMRDYLLYEDEDEGEGESASRKQKAILALL
RSVNDHSEFFVHSTRAFSLNRLIRSNVRRADLKKLIGELSKLDSERLVPQ
RFSGTKRVVDGKVLLFPSRDGQQIKEIVRQTLAVLASENGTAFERVYALE
ILNGTESHGLARTTANIYQGFGYDVVRVDNALEQSVQKTVLVDRIGNPAV
AKVVAQVIRCQNIETTSASLDEYGVETGIDFTLILGKDFNGYLVKEGT
>gid:806  TP0770  ATP-dependent RNA helicase
MQGAWLGAHRERAPRALERYGVQRSLCVFVSTRKFHFLLHFPSMDVSFEE
LGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAA
FGLPLIQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVY
GGVSIAEQLRNLEQGGEIIVGTTGRVIDHIERGSLELSYLRYFILDEADE
MLNMGFVEDIESIFSHANKDARVLMFSATMPRQILSIASTFMGSYEVVEE
VTPEEARPLIEQFMWVVRDADKIEALVRLIDVSDNFYGLVFCQTKADADT
VAKSLDERHYHVAALHGDIPQSQREKILERFRTKRARILVATDVAARGID
IEGITHVVNYSIPHDSATYTHRVGRTGRAGSQGIAISFVRPHETRRMEYL
SKHCNGELKASTVPLVEHILTQKEGRIFSSLKTHLCQLLSEGVHGTFTRF
AQRLLQEDLKARVAEALGTSADVPQEPNVSLVAALLQIHYGTALDPRQYR
DIKTITPETARARPHDAEKAYVRIEYGKKSYLTRKRVVQFICALVKIPGH
LVDRVDITERCAFARIPRRAAEEAVRLSKKRKDLPRVSFVGHASRLRNTA
TPAEKSTYPRRLPSGEGLREQISRRTSSSKKASGKPEDSLPPPQEHRLD
>gid:843  TP0805  exoribonuclease II (rnb)
MMELHVGSPVLYRKRPACVHAIERGKDAKITIETEHGLRRVRVKDVLLLH
PGTVSSLVELLSASHIARISEESVQDAREFFGTEAPSFFELAELLWGASA
AQSWAYWEQSVQSAYFVCNEPAAAVRIRSQQECASCAVQEEKKEARQALK
QAFIQELRRVARSARNMAPTAQEGMHRVHVSQVNEQFTPFLQEIEAFALG
HANRCKILQCALGCEHREQAHEILLHFGFWPVYRNPYPDRLCPLFLSPAH
VSGSDGERAAQQDVHTHRCVTQARTDCTHLAAYAIDGEGTRDPDDAISFD
GTYFWIHVASPAELVLPDSHADACARTRGRSLYLPEGAVRMLSDVVVDTC
ALARDAVSPALSFKILLDEHGDISCVHVLRSMVRVTRLSYAEADSQRDTP
ALQPLFDFARNNIARRKGRGAVDICFPDVHMRVDFPVQETGQAGKEMNAG
DVPDTQGKVPRVHIEAQQSYESMSMVREFMLLAGEAAARFAFLHNLAFPY
VSQERPQLPVQLPAGLAGEYKKRRAMKARRVSTTAAVHAALGLSQYSQVT
SPLRRYVDLLAHQQLLACIDHAYAKAPAVGSAQTNETLALKLAQADEAAR
QATQAERVSRRHWTLVYFLMHPHTRYEAIVLEPLQPRAHVWLPAVALEAD
VALGRQAQFNERVMLRVVRVRLATLEVHFSVCEHCHRGVTQAVEGEAEQP
SXEEYVFGSVLFPCGYFRRCVYXSHLAGSSLQGVPGFCVKVQCFGQIECK
GXQSSLVCG
>gid:847  TP0809  ribonuclease III (rnc)
MSLCLGHIFSRSRSPLTPERRESLRRLQETLGVKFRDPTALDQALSHRSL
FSSKEDHCGVRHNERMEFLGDAVLGAVAAACLYRALPDSHEGDLAKTKAV
LVSTDTLSDIALSLRIDHYLLLGKGEELSGGRHKKAILADATEAVIGALF
LDSGFKAAERFVLRLLLPRVRPIREKNLHHDYKSTLQVLAHQRYRSKPEY
TVVKRTGPDHSVRFWVDVTVGDARFGPGYGTSKKSAEQCAARLAWEQLSG
TLRE
>gid:928  TP0892  N utilization substance protein A (nusA)
MFGVSNDDIRKYAQEKGLDEDFAFKIVEQTLKAAYKTTFKTDENAVVTFG
EERVCIYARKRVVEEVYDRVSEVDLSTALELDPTTSLDSEVLVELESEDF
KRGSVQAAVQRITELSREIQKDALYAEYKSKEGEIIVGYYQRARNEHIYV
DLGKVEGLMPKSHQLPQDDYRQNDRIKSLVREVRKHPKSSVVQLILSRTD
SAFVKELLAVEVPEIYDGIVEVAKIVREPGYRTKIAVTSRRDDVDPVGAC
VGPRGIRIRMVIKELNDEKIDVLEYSPDPVIFIKNALSPAEVLNVVVLDE
EKRSALAIVAESQLSIAIGKQGLNVRLANRLVDWNIDVKTESQFEEMDVY
TDTRRAAENLFDNDYQEESEFSSYVGFTPELIKILQDNGIQDVQTLVDLG
EEGLRALEGMDEAHVQELLAAIEENFEVVEEGEEASVTSSPGTGGDEDQA
LQCPECGVRITTDMSECPHCGIGLSFEFEYEENEE
>gid:961  TP0924  tex protein (tex)
MTLDQDFVDALSVQEDELAERVARELHIRTAQVTAVRSLLKEGCTVPFIA
RYRKEAHHCLDEVLIRDCERLFHTHLARETRRLEIIRAVFKEGMLTPTLY
EHLRSAPTLAALEDLWAPFKKKKKTRGMQAIEKGLEPLARLIETQCATQA
EIERAAAALVAPAADSDRAVSSAQDAIAGACDILAEETAHCNANRAALKS
FYLSAGVVTATGIGDAHAAHTSVYQMYWDYAEAVRDIKAHRVLAINRGER
EGILDVKITVDLDAAVEQVQEAVHPNNRYHRDAITDGVVRLLSPAVLREI
RADLTASAEQHGINVFSENLTNLLMTQPVKGTRVLGIDPGIRTGTKCAAL
DETGQYLGSFVIYPHNTDHARAALTQALDRYRIQLVAVGNGTGSHAVQEL
IASIISETHSAVAFTVVEEDGASVYSAGDIAREEFPDLDLTIRGAISIGR
RLQDPLAELVKIDPKSIGVGLYQHDVNQKKLSEELHAVVDAVVNSVGVNL
NTASVSLLKHVSGVNSALAKRIVHHRATYGIFTSREQLKTVSGMGQKTFE
QCAGFLKIPESTNPLDNSWVHPENYATGKIIFDILRAGGTVSAAQKAQVQ
SQCAVSDRTVEDIITELQKPNRDPREDYPKPVLRQGLISFADLKVGATVQ
GKVKNVVDFGAFVDIGIKETALLHVSQMSDHFVSNPLKKVKVGDVYTCTI
IGLDEARRRISLSLRQEQRAPADHTATPSRRAPRPRAPEGKTSPERAKTR
GTSPAPGQDFARYQPFAQFFKGKTPHPK
>gid:1053  TP1012  RNA polymerase sigma-43 factor (sigA)
MLSIWYVPFEQKEYSVRQMQFRHDENTLTAYLNDLKRIPLMNEKEEYACA
CAAYAGDAQAKNALVRANVRFVISVARHYRTCGLPLADLISEGNIGLLTA
AERFNPARGCRFISYAACWIRQSILKALNEKARIIRLPVSRIRAAKSTYE
YIPPVTSVNVGISKTQGGNRYGKRRATMCRAVPTVEEVHIWHTPLSLDAP
LGASGSRGESGDVDGLRIGDCVPDDLYAQPEEHMLACALQADIAKILRLL
PARDAQVIRYRFGLGGYERRSLQEIGEIFQITKERVRQIEKKALLRIRSC
ARQHRLDSYIA
>gid:1056  TP1015  N utilization substance protein B (nusB)
MSEVFPKIGRRRARILAFQALFAWDAAGITPETLTQFTWLRRNPPPSTQD
LGFSRLLFLGTLEHLREIDGCVSSRLEHWDFVRLNKVDKAILRLSAYSLL
FQKDIPPVVVIHEAVSIARDFGTDDSFRFVNGVLDNIAKSA
>gid:1070  TP1029  T. pallidum predicted coding region TP1029
MSKISSKISSVDQEKFQAFLQQILRNVKTQEDPRVLDAYRRLFRKSVPFS
MRSYVAAHLAHTHCRAGATAGSTRRTGAREGIRTGSAHAPSCASAPASAA
RARDFERKARDYPALCPGDTTSIFISIGKNRHIYPRDIIALLMQRADVAR
EHIGTIRILDHYSFIQVLSGEAEAVIARLNGLFYRGRTLTVSHSRRADEH
PAPSTEPHAAAVAPEPDFMAEPIPALEE


# Treponema pallidum subsp. pallidum SS14, SS14

>TPASS_0458 hypothetical protein
MDQAEPCTLHGAPAPDLALLEAILFVEGVRLSYACLARKLGLSEQAVGEC
VARLGEALASGARGGGGLELHCNEQGVALLPAATVRERLATLYGKRSEGR
LSRAAMETLSIVAYAQPVTRAEIEAIRGVGADTMIRLLSERRLICEVGKK
DIPGKPAQYGTTEEFLTAFRLRSIADLPKLDEEEQRRFELTR
>TPASS_0770 ATP-dependent RNA helicase
MQGAWLGAHRERAPRALERYGVQRSLCVFVSTRKFHFLLHFPSMGVSFEE
LGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAA
FGLPLIQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVY
GGVSIAEQLRNLEQGGEIIVGTTGRVIDHIERGSLELSYLRYFILDEADE
MLNMGFVEDIESIFSHANKDARVLMFSATMPRQILSIASTFMGSYEVVEE
VTPEEARPLIEQFMWVVRDADKIEALVRLIDVSDNFYGLVFCQTKADADT
VAKSLDERHYHVAALHGDIPQSQREKILERFRTKRARILVATDVAARGID
IEGITHVVNYSIPHDSATYTHRVGRTGRAGSQGIAISFVRPHETRRMEYL
SKHCNGELKASTVPLVEHILTQKEGRIFSSLKTHLCQLLSEGVHGTFTRF
AQRLLQEDLKARVAEALGTSADVPQEPNVSLVAALLQIHYGTALDPRQYR
DIKTITPETARARPHDAEKAYVRIEYGKKSYLTRKRVVQFICALVKIPGH
LVDRVDITERCAFARIPRRAAEEAVRLSKKRKDLPRVSFVGHASRLRNTA
TPAEKSTYPRRLPSGEGLREQISRRTSSSKKASGKPEDSLPPPQEHRLD
>TPASS_1029 hypothetical protein
MSKISSKISSVDQEKFQAFLQQILRNVKTQEDPRVLDAYRRLFRKSVPFS
MRSYVAAHLAHTHCRAGATAGSTRRTGAREGIRTGSAHAPSCASAPASAA
RARDFERKARDYPALCPGDTTSIFISIGKNRHIYPRDIIALLMQRADVAR
EHIGTIRILDHYSFIQVLSGEAEAVIARLNGLFYRGRTLTVSHSRRADEH
PAPSTEPHAAAVAPEPDFMAEPIPALEE
>TPASS_0854 hypothetical protein
MNARLCFFSRLIFCVLSICALPLVAQEDKLYWEDPWALSTERAAFVKVAY
SHDVVAVVWQEVTPKNATSGEIRLSASFYDGSTWHTVRTFSPPLLYNHRS
PSLASVAVNRKNEIFVAAAFDAHTITVFKTTDFGKSFTHTVLRSQGSDIV
APYVSVASDDSLLLFASHGSEDHFSILLCRSEDGERWTPFQEFLSTEFSR
RLFLPSHVSTQAQEIVVFQAHHQEGERASYQLYSTVSFDQGNTWSAPVPV
TQPDEYHNQRPFLDRLSDDRFAVTWERSERTSTRYEMCYAELDRYGRKIG
TTLRLAEPSDRLITPNFVHIDGTTFCVWAGESAGLNTIFLAQKKEGAWST
TAVRSSEDALLFPHAVRVDNHLEVFWQEGEGARARVMRLRPDQSVQPPTL
IAENFSPNAVRKGTRARVRIVFPRDSSGIAGYNYAWQCGVQPAAPPDYVA
HFPDKPQIELEATQDGTWFLAVTVWDFAGNKSAPAYLSYTRDTTPAARPQ
LQTPLLENTHALKSNTFTLSWNQPSTDAQGNEERDHTSFLWSLQQVAPLS
ALTSLRVDTDVRTFEEFQQRCVRAFPIPVDVHGTRSRQSSVSFTNKENGI
YRFSVYALDRSGNVSEPAVVFFALRHFVPYTAIRYVDVKKDPAGSLQMSI
VGNGFRAQGTVSQVYIDRDRKAPYDLVLHAQEFAVGSDNLISDIHIDNLK
KGSYHVGVWHPARGVHFAESRVTVSEMGTVKFGAYDYEHQVRWSIPHTGG
LRVNFVSLFMLIALFLAGVVFAASLTRIGDIVGEAFVLKKQVEALMIGEL
MPSEKRRKAMALKTHGAGLRVKFILFALTLVISVIFIVSVPLGVRFSKTQ
KDLLAKNLFSRVQVLLESLVAAGKVYLPAKNKLELGFLPNQTTALHEARY
AVITGESEEPHEEGIDFVWATNFSDIETVLNEPEYRQGNSRFVDKRIAQI
LPAMEDLNRQVKKDAEKIAKGIADLTQEAVALALRTDQGSVRRRDDIQSI
TRQMDQRLLEIFSTFSNNAVGSYPEYRVDNLSKRHSSYLFYKPILYRQRG
HADSFVHGVVFVEVSTQELLEHIEGLQRDLIKMVFYVSLIALACGVFGAW
ILASIIIKPIRRLASHVAMIRDTEKKEELEGKLIAIKGQDEIALLGRTIN
DMTEGLIKAALASKDLTVGKEIQKMFIPLDTNTEGRKLTSGYTCDDHVEF
FGYYEGALGVSGDYFDYIKLDDQHYAIIKCDVAGKGVPAALIMVEVATLF
QNFFKDWNIQSHGINLSDIVSRINDLIEARGFKGRFAAFTLCIFNTVSGT
VHFCNAGDNIIHIYDAQQRKMKRITLAQTSAAGVFPSFMIDMKGGFGVET
LTLRTGDVLFLYTDGIEEAKRLFRNKRFELVLCQEQGLAHDAPHETHTVG
QAGEELGAERVSSIIESVFLRKGFSLQKWHNPVEGEKFEFDFSSCEGNLD
EAVLALVAVEQVFRMYKHPRATNLDKIRVDKKVDMFLARYFVQYPEYCAR
KEVNSEYEEYLYYTFIKEDDQYDDLTILGIRKR
>TPASS_0431 hypothetical protein
MLLIDVGNSHVVFGIQGENGGRVCVRELFRLAPDARKTQDEYSLLIHALC
ERAGVGRASLRDAFISSVVPVLTKTVADAVAQISGVQPVVFGPWAYEHLP
VRIPEPVRAEIGTDLVANAVAAYVHFRSACVVVDCGTALTFTAVDGTGLI
QGVAIAPGLRTAVQSLHTGTAQLPLVPLALPDSVLGKDTTHAVQAGVVRG
TLFVIRAMIAQCQKELGCRCAAVITGGLSRLFSSEVDFPPIDAQLTLSGL
AHIARLVPTSLLPPATVSGSSGN
>TPASS_0701 possible DNA-directed RNA polymerase
MIFPMQQLIEFQGNIYEITCAATRRAFQLAAVCDPVLDELGGKVVSAAAQ
QVFSGTVDYRIEPQELG
>TPASS_0219 possible sigma factor SigB regulation protein
MGLLFFSYLFVAVFVFDVFCLKFYTRRAYALLANIALVSGVASFFLSLSL
TAVLYGKMNIQAFLFKIALIFFTHASYLFSDMAYQLPYFKKNKRFFLCNT
TIHLFGILIIIFGMGPFKWNVLVSFKFYQNYLFSSVSGIVLYAALFFLII
PCVTFATLVKKAFMMKSIAYRQQLLFLAGAVALGFITWVIILFLFAVFPW
VFVFFPLGGVFIVLFSQWAFASTGIVSFKEVVFALSRFVLCTVGFSCTAG
YISVFWVHRFSTLDMQFVFGFFIVYALFALRDYAFDACSVFFGEIADSGQ
KLAAELQALDYTAKPAQVLRTFMDTLRMRIACRGLTFLLADEAGVFKTVY
SDFEEMATHEMEHQSLQYFFNQDVLMIRKSDPVIDHARQAIRTDILHFFD
ITHAQMIVLIREAQKLIGCLCFGMKNNGVEYSNHDQHVLEKLYSHFVLVS
YYLQNIAKQDVVITVDKELKMSHQIIESIQRKRDFIQDASVEVDSIAYSA
HQLGGDFVDFIKLSEKRYLLVIGDVSGKGLAASMSMVILKSVLSTFLRGL
CLEETAVFTTFIEKINRFIKDNLPCGTFFAGVFCILDLATHTLYYANCGI
PLMSMYVASYKNVVEIQGEGRVLGFVKDVMPFLRVRKVQLGQGDVVVFST
DGMVEVQNLQRERFGNERVDRILQESHGLPVSQITRTIYARLCEFMARDM
QDDVTVLAIKCLGPR
>TPASS_0461 hypothetical protein
MLQAAACGAMRGGVLEYTGKMEGMGVRVERVRCEQNLSKTAFARELGIGV
EELDAIERGTMPLSRDLTLLLCVVFAVNRLWLESGEGEPFSASAVSPQET
VQPEEEAREPPIPPPRWRG
>TPASS_0709 RNA polymerase sigma-28 factor
MGNTAFEQQSEEELWLEYRRTRSAKIREYFVVQYAPLVKYVASKIAVGKP
GNVEFDDLVSYGIFGLFDAIDKYDPEKNIRFNTYAVTRIRGAIFDELRSI
DWVPRSVRQQTRQIEEAIADLEARLGRXATDTEIACALNIELEEYHQLLL
KVSGTSVISLADSKFGGDERDHVSVGDSIEAPASLNPDVIVEREEIKRII
AEAIRELSQREQQVLILYYYEEMTLKEIGKVLKVTESRISQIHTSANLKL
KAKLTNIKKGIR
>TPASS_0093 hypothetical protein
MRTCPDCAAWCAYVDGEGSQLQRREMCAHLQGCTHCATCVAHYRAMRSLV
KHADRVSSRDFTMAFPYLRVRHRVASCMPRPWWQARSSPLSAAGPVRAAA
LAVAVASLCVCTLLLTHIVERRPVSRAGEASFTPIVPMRVRAPVGYARGV
KVFGPAVSANSNVLRKPAAVFTVCAFAQLYGSDPAYEMETVPVRLSVIPV
PSYVLNASKAQFFSP
>TPASS_0380 possible DNA repair helicase
MTSVPKPLIIQADRSILLDVHAPEAVAARKALVSFAELEKSPEHLHSYRL
TPLSLWNAASAGFSPQMIAQTLTRFSRFTPPQTVLDWVVDIMSRYGKIRL
REDTTHSTLLRLQVRDAHIAREIAASKSLASHLSPTTACLQDGPLPTPDT
ARIAQPDTTPQVQGAQTGCSYDFLLPRLHRGTVKQLLLRHGWPVHDEVPL
REGTPLSLRLRISPASCPPPSTAYPCCHTPGTPSFVPRDYQWEAADAFVG
NRTQGSGFGVVVLPCGAGKTVVGLLVMGLLQTDTLILTPNSAAAQQWKRE
LCEKTDLDGTSIGIYSGECKEIRPVTIATYQILTWRAHADAPFSHFRLFM
ERSWGLIIYDEVHLLPAPLFRITAELQVVRRLGLTATLVREDGCAQDVFS
LVGPKRYDVPWKDLEARGWIARVRCVEVRVTMDRSLQYQYMTAPVRLRHR
LASENEAKVAVVQRLLRAHAGAPTLIIGQYVQQLLHLAHVLQVPLVSGRQ
TYAAREAIYQRFREGTLQVLVVSKVANCALDLPDASVAIQVSGTFGSRQE
EAQRLGRLLRPKICDAHFYSLVTEQTVEEDCALRRQRFLVEQGYTYETLR
VSEVHE
>TPASS_0665 hypothetical protein
MTINTCRETGLHRALKDYFSPRGSRQEVELRGSICDVVHPDGTIVEVQTS
GLGRLEAKLKKLLPYHQVMVVYPVSRRLYIRMLNEDGSERHYRKSPKEGS
FFQIYREIGRLHDLLDHEHLSLHIVYIHSEVIKVDDRKGRSRYKKPRIVD
RKLLEVQSSEEFRNKGSLAQPLLSKLPEIFCCDDLAQTGTGVHCRYALRF
LRRNGMATPHSKRGRTKLYRKEPPGDNRSPPPWQEPHGEGLAEKLSPGPA
R
>TPASS_0739 hypothetical protein
MKVLDMGRHGLFLLLIFFMLVITVFAVFFGMKRDPLESSLSSDNILKVLF
VIEHENVPISSNVVAYYPATRRAAMFDIPHNMGLILQSLGRTDGIGSLYS
ERGIEEYKREVEKLTGINVPFSVVCSLDNFSKLTDLLSGLSVFIPTPIDV
HTERAGHVLLPSGSVSLDGDKMRDYLLYEDEDEGEGESASRKQKAILALL
RSVNDHSEFFVHSTRAFSLNRLIRSNVRRADLKKLIGELSKLDSERLVPQ
RFSGTKRVVDGKVLLFPSRDGQQIKEIVRQTLAVLASENGTAFERVYALE
ILNGTESHGLARTTANIYQGFGYDVVRVDNALEQSVQKTVLVDRIGNPAV
AKVVAQVIRCQNIETTSASLDEYGVETGIDFTLILGKDFNGYLVKEGT
>TPASS_0218 possible sigma factor SigB regulation protein
MIRRRLAIVKAGSFALLALFFSIFLRFLSPRYSFLGRFVSARDMALLISR
YEHLPELSSRDRALLVGFVFMIFALALTEIQRYAHGRIRLVVYRQTETRL
FEHFITLLRFCYRNEQLVAAFQEVLEYRADCAVLLMDTISNRVIYNSAAR
FVSDTRTYDLVLHKFSMDYTWHWSDGIYFFDDDLCLMSDRRRARGVCLSS
GELRLFIVCRFIRAVEREVISLLFKEFEEYLNRKRNMSTLLLYSHVSQEW
AMMARVQRALLPKALPHTKEICVGAFYQPLVNVSGDYYDVISIDEHLFLF
VIGDVSGKGLAASLVMGVVLSTIRIVEDKKNLPEILYAVDRAVKRMHLHD
KYTTLFLGLIDTAGMNIRYINASMESPLVFTQAGEAHEVYHLHSNCPVIG
IVDLPPIQIHERTLCPGDVMVMVSDGVVEVVNAQGVELRDADEYLHILER
HVGEHPAQMAQSIAALALNFSADRTTHDDMTIVTVQVKR
>TPASS_0511 carD, transcription factor
MATRAWWSSLVFPLPLPTDFFPCLCYAGPMGKACAFRPHDHVVYPGQGVG
QVQEISEKTFKNETLLYYVIYLEESDMTVLIPVDKAQELGIRTIVKRKEA
ERALRFLSEDFDPSPLDWKMRYQVNLNLFKSGGILDNAAVVRSLYHRSKV
KELPIQERRLYDSAYRIFQDEMCFALGLRPPEVETLIHGYLEKAKENPVV
SGTVDVPG
>TPASS_0082 fhlA, formate hydrogenlyase transcriptional activator FhlA
MHRLREILPAHLPIRKETSEHLSTRVSCARLYPIXNARKRIRKTNTIPCT
RHAHRLHAENCTDMPFSSILGPHELFGLSCTRALPPAAEKSLEMILDALY
EIARYELAVVLSFESSQILRVRKARGPLYTPRLQHHTIDLTKRQDLARIL
SQKSPYLFDPTLAHTDTYTELIPMPQNHSCLIAPLYIDDTPIGMLTLDHR
LCEQFTPDVVRFITTLSKLISLAVAQTDASETLSQKSHALLTERNALLAP
QSPAFKNMIGTSPAWTRTLDAIKLVAASDLPVLVCGETGTGKELVARTVH
QLSTRSDKPFVPVNCSALVHSLAESELFGHEKGAFSGAVGTHRGRFELAH
GGTLFLDEVGDLPLELQPKLLRVLQDGVFERVGGERSVSVSVRIIAATNI
NLSEAVTQGKFREDLLYRLDVFPLSLPPLRERAEDVALLAEHFIQKIKTR
PGFERTQLSPSAFKKIFSLTFPGNVRELRNLLERAALLARGDTIGAEHLV
CRTPESGTQTTVYPREHTEVSESVQPAIPLCIRDSSCMVRCTQGKKEETT
LVVNFHQAQRAAIQAALDASNGKIYGANGAAEILGLKPSTLQSKMKKLGL
>TPASS_0019 greA, transcription elongation factor GreA
MVSGRGLVVTAKMLNAKKKELQDLLDVRIPENSREIGRALELGDLRENAE
YKAAREEQTRLNNMVTRLQEEIERAQVFDPTTVVAGRVSFGTVISLKNHT
SGEDETYTILGPWESAPERGIISYMSPLGSNLLNRKTGEQLAFTVGEHEK
VYEILSISAAEI
>TPASS_0892 nusA, N utilization substance protein A
MFGVSNDDIRKYAQEKGLDEDFAFKIVEQTLKAAYKTTFKTDENAVVTFG
EERVCIYARKRVVEEVYDRVSEVDLSTALELDPTTSLDSEVLVELESEDF
KRGSVQAAVQRITELSREIQKDALYAEYKSKEGEIIVGYYQRARNEHIYV
DLGKVEGLMPKSHQLPQDDYRQNDRIKSLVREVRKHPKSSVVQLILSRTD
SAFVKELLAVEVPEIYDGIVEVAKIVREPGYRTKIAVTSRRDDVDPVGAC
VGPRGIRIRMVIKELNDEKIDVLEYSPDPVIFIKNALSPAEVLNVVVLDE
EKRSALAIVAESQLSIAIGKQGLNVRLANRLVDWNIDVKTESQFEEMDVY
TDTRRAAENLFDNDYQEESEFSSYVGFTPELIKILQDNGIQDVQTLVDLG
EEGLRALEGMDEAHVQELLAAIEENFEVVEEGEEASVTSSPGTGGDEDQA
LQCPECGVRITTDMSECPHCGIGLSFEFEYEENEE
>TPASS_1015 nusB, N utilization substance protein B
MSEVFPKIGRRRARILAFQALFAWDAAGITPETLTQFTWLRRNPPPSTQD
LGFSRLLFLGTLEHLREIDGCVSSRLEHWDFVRLNKVDKAILRLSAYSLL
FQKDIPPVVVIHEAVSIARDFGTDDSFRFVNGVLDNIAKSA
>TPASS_0236 nusG, transcription antitermination protein
MAKEWYILHTFSGREARVERAVRMLVEHARIPTNVIFDIKIPEELLTEVK
DGKKRVVRRKFFPGYLLVEMDLPEVDWRIVCNEVRRIPGVSGFLGSSGNA
KPQAVSADEARRILQKAGEIKGDRTPRIAQTFLVGQQVRIVEGPFATFSG
EVEEVMSERNKVRVAVTIFGRATPVELELVQVEAL
>TPASS_0271 parB, chromosome partitioning protein
MGKDKLGKGIDALLQESSDRYDVRDSGGVQTVHYLDPTLLQANPHQARRT
FAQESLEELAASIREHGVIQPVLAEKNQDGSWVIIAGERRTRAAILAGLN
RIPVIVRTCDHEKKLAIALIENVQRENLNPLEEARAYQHIMDLGNLSHEE
LAQRVGKNRSTITNALRLLKLPPEVQQSLSSRTLSAGHARALLSLTDMQL
CVSVAQYVVTHALSVRAAEECVACLNRGGSLHDYAGARAHTAASSPSPGG
SATDITRLPPSSPSTDAQLDARIRNADIADIEQQLLEQLGTKVRISGNLQ
RGRIEITYFSQAELERLYGLLKAH
>TPASS_0687 recG, DNA recombinase
MLIGEIKEPVSVLKGTGKVVLAQLERLNISTIGDILSYWPRLWEDRTQEQ
MFSQWTLAHRLQVRVSVTAHCWFGFGKSKTLKLVVQDGQGCVAELLCFRR
NFLHFMFPVGSEAVVYGSFYEKDGLLESSSFDIEKIDCIEKKILPVYPLT
KGLKQMKLRMLICAAMDQWIGTVDSELPKPILEKYHLLTKRDVLLSMHTP
RTLDDVAKGKHSLIFEEFFSLQMTIGMRSLQKRGRLPLTQGESDQQSAIP
SVVSELSLLQKKLHRCLPFELTVDQKRVITEITQDLEREEPMARLIQGDV
GSGKTLVAFFSCLKIIEQGGQVALLAPTELLARQHADTAARLLAPIGIRL
AFLTGNVKSEGRAYLLEALVAGEINLVVGTHALFSKSVRYHDLRLVIIDE
QHRFGVLQRSALIQKGREGNPQGKTPHIIMMSATPIPRTLALSVFGDLDI
SIIKSMPGGRKPVITYIARKTKAEKVYEFVGNEIEKGRQAYFIYPRIHDI
GLTDLKSVQCMYMYLKNYFARYAVAMIHSKMTEEEQQRIMKYFSEGTVHI
LVATSVVEVGVDVPNANCIVIEHAERFGLSALHQLRGRVGRGDVQSYCFL
MHGDEMTECAKRRLKIMGSTADGFVIAEEDLKLRGPGDVGDTKNFEQSGY
SGFRVADPVRDYPILQVAREAAFELLRKEKGSSEAR
>TPASS_0254 rho, transcription termination factor Rho
MKVSVGTVVGQGELGLEEGIVGNQIVSEDSAADVGECDAYGGRKKLVIRS
RSRRRVVTPKALEVEKRPRRALRFKQNFCPEDAETSESSADVKGRARLLI
DDLTEMGMHALRDFAVQRGISQEDVVVMKKSDIIFHVLKNHTENGGVIFA
SGSLEILPDGYGFLRSPQNSYLPGSDDIYVSPSQIRLFNLKTGDTIYGQI
RSPKEGERFFAMLRVETVNFEEVAKVQDRVPFDSLTPLYPREKLNLETRT
EDISTRVMNLFCPIGKGQRALIVAPPRTGKTILMQKIANAITQNHPEVYL
IVLLIDERPEEVTDMERTVDAEVISSTFDEQATRHVQIAEIVLERAKRLV
EHRKDVVILLDSITRLARAYNQTMPTSGKVLSGGVDSNALHKPKRFFGAA
RNVEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNMEINLDRRLSDRRL
FPAVSIKKSGTRKEELLLTEEEMQRIWVLRKVINPMDDAEIVELLIDKMR
KTKNNEAFLRSMNTGAFSS
>TPASS_0805 rnb, exoribonuclease II
MMELHVGSPVLYRKRPACVHAIERGKDAKITIETEHGLRRVRVKDVLLLH
PGTVSSLVELLSASHIARISEESVQDAREFFGTEAPSFFELAELLWGASA
AQSWAYWEQSVQSAYFVCNEPAAAVRIRSQQECASCAVQEEKKEARQALK
QAFIQELRRVARSARNMAPTAQEGMHRVHVSQVNEQFTPFLQEIEAFALG
HANRCKILQCALGCEHREQAHEILLHFGFWPVYRNPYPDRLCPLFLSPAH
VSGSDGERAAQQDVHTHRCVTQARTDCTHLAAYAIDGEGTRDPDDAISFD
GTYFWIHVASPAELVLPDSHADACARTRGRSLYLPEGAVRMLSDVVVDTC
ALARDAVSPALSFKILLDEHGDISCVHVLRSMVRVTRLSYAEADSQRDTP
ALQPLFDFARNNIARRKGRGAVDICFPDVHMRVDFPVQETGQAGKEMNAG
DVPDTQGKVPRVHIEAQQSYESMSMVREFMLLAGEAAARFAFLHNLAFPY
VSQERPQLPVQLPAGLAGEYKKRRAMKARRVSTTAAVHAALGLSQYSQVT
SPLRRYVDLLAHQQLLACIDHAYAKAPAVGSAQTNETLALKLAQADEAAR
QATQAERVSRRHWTLVYFLMHPHTRYEAIVLEPLQPRAHVWLPAVALEAD
VALGRQAQFNERVMLRVVRVRLATLEVHFSVCEHCHRGVTQAVEGEAEQP
SXEEYVFGSVLFPCGYFRRCVYXSHLAGSSLQGVPGFCVKVQCFGQIECK
GXQSSLVCG
>TPASS_0809 rnc, ribonuclease III
MSLCLGHIFSRSRSPLTPERRESLRRLQETLGVKFRDPTALDQALSHRSL
FSSKEDHCGVRHNERMEFLGDAVLGAVAAACLYRALPDSHEGDLAKTKAV
LVSTDTLSDIALSLRIDHYLLLGKGEELSGGRHKKAILADATEAVIGALF
LDSGFKAAERFVLRLLLPRVRPIREKNLHHDYKSTLQVLAHQRYRSKPEY
TVVKRTGPDHSVRFWVDVTVGDARFGPGYGTSKKSAEQCAARLAWEQLSG
TLRE
>TPASS_0212 rpoA, DNA-directed RNA polymerase, alpha subunit
MPRRNLLKGFKRPKVLEFLSENSSECYGKFTASPFETGFGTTVGNCLRRV
LLSSIQGYAVTGVRITSFDADGVAHFISSEFEQIPHVREDTLEILNNFKR
LRFLLPQGAESSTFTYEFRGAVSLTGKDFAKKFQLEVLSQDLLIMEMMDG
AHVEVELHVEFGRGYVPAESHDRYADLVGVIPVDAIFSPVLRVRYDIQSC
RVGQRGDYDQLSLEVWTDGTVRPEDAIAEAAKIIKEHFTVFVNFDETALD
LEDEPEEDDPAVLELLNTKIADVDFSVRARNCLLTMGIKTLGELTRISEQ
TLANTRNVGKKSLSEIQGKLQEYNLRLGMADYNHVGVVSRLMRQKEEIDE
A
>TPASS_0241 rpoB, DNA-directed RNA polymerase, beta subunit
MSARVCKTHRVYVGRDVRNFMDIPDLIEIQLRSYDTFLHGARNTPSGADT
LISGTREELGLEDVFKTTFPIESSTGDMTLEYQSYSLDEKNIKFSEAECK
QKGLTYAIPLKALVDLRFNNTGEIRRKDIYMGDIPKMTERGTFIINGAER
VVVSQIHRSPGVVFSHEKDKEGREVFSSRIIPYRGSWLEFEIDQKKDLIY
AKLDKKRRILGTVFLRALHYETREQIIEAFYAIEKTPVCQDRAEYELLTG
KILARSVTVENEQGETRVLYKAGEKIHPHVIDDLLQNGICEVYIINLEAE
GSLRSAVVINCLEREEMKFSKSGAQDELSREEALCIVYSALRPSDPMTMD
AAEKDLQTMFFSPRRYDLGRVGRYKLNKKFRSDSPTTECTLTLDDIVNTM
KFLIRMYSGDAQEDDIDHLGNRRIRSVGELMTNTLKTAFLRMERIAKERM
SSKETETIKPQDLISIKPIMAAIKEFFGASQLSQFMDQVNPLAELTHKRR
LNALGPGGLSRERAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSMANYA
RVNGYGFLEVPYVRVRDGVVTKEIEYLDAMDEDRYYIGQDSTAVGPDGVI
RVDHVSCRHRGDYSTRSPKDIQYMDVSPKQIISVSASLIPFLEHDDANRA
LMGSNMQRQGVPLIFPEPPRVGTGMEEKCAYDSGVLVKAKQDGTVAYVSS
EKIVVCSAAASGEEQEVVYPLLKYQRTNQDTCYHQRPIVHVGDRVQVGDA
LADGPATYRGELALGRNILVGFVPWNGYNYEDAILISHRVVKEDMFTSVH
IKEFSTEVRETKLGSERMTNDIPNKSEKNLDNLDAEGIIRIGSKVRAGDV
LIGKITPKSESETTPEFRLLNSIFGEKAKEVRDSSLRVPHGVEGTVIDVQ
RLRRSEGDDLNPGVSEVVKVLIATKRKLREGDKMAGRHGNKGIVARILPE
EDMPYLDDGTPLDVCLNPLGVPSRMNIGQILESELGLAGLRLDEWYESPV
FQSPSNEQIGEKLMQAGFPTNSKVMLRDGRTGDYFQNPVFVGVIYFMKLA
HLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAANT
LQELLTIKSDDMHGRSKIYEAIVKGEASSPTGIPESFNVLVQELRGLALD
FTIYDAKGKQIPLTERDEEMTNKIGSKF
>TPASS_0242 rpoC, DNA-directed RNA polymerase, beta subunit
MKDIRDFDSLQIKLASPDTIRAWSYGEVKKPETINYRTLRPEREGLFCER
IFGTTKEWECFCGKFKSIRYRGVICDRCGVEVTHFKVRRERMGHIELATP
VSHIWYYRCVPSRMGLLLDLQVIALRSVLYYEKYIVIEPGDTDLKKNQLL
TETEYNDAQERYGGGFTAGMGAEAIRTLLQNLDLDALVAQLREKMMEKGA
KSDKRLLRRIEIVENFRVSGNKPEWMILSVIPVIPPDLRPMVQLDGGRFA
TSDLNDLYRRVIHRNSRLIRLMELKAPDIIIRNEKRMLQEAVDALFDNSK
RKPAIKGASNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KLWQCGLPTKMALELFKPFIMKKLVEKEIVSNIKKAKMLVEQESPKVFSV
LDEVVKEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIRLHPLVCKPFNADF
DGDQMAVHVPLTQAAQMECWTLMLSNRNLLDPANGRTIVYPSQDMVLGLY
YLTKERSLPEGARPRRFSSVEEVMMAAEKGVIGWQDQIQVRYHKCDGQLV
VTTAGRLVLNEEVPAEIPFVNETLDDKRIRKLIERVFKRQDSWLAVQMLD
ALKTIGYTYATFFGATLSMDDIIVPEQKVQMLEKANKEVLAIASQYRGGH
ITQEERYNRVVEVWSKTSEELTSLMMETLERDKDGFNTIYMMATSGARGS
RNQIRQLAGMRGLMAKPSGDIIELPIRSNFKEGLNVIEFFISTNGARKGL
ADTALKTADAGYLTRRLVDIAQDVVVNEEDCGTINGIEYRAVKSGDEIIE
SLAERIVGKYTLERVEHPITHELLLDVNEYIDDERAEKVEEAGVESVKLR
TVLTCESKRGVCVCCYGRNLARNKIVEIGEAVGIVAAQSIGQPGTQLTMR
TFHVGGTASSTTEENRITFKYPILVKSIEGVHVKMEDGSQLFTRRGTLFF
HKTLAEYQLQEGDSVQVRDRARVLKDEVLYHTTDGQTVYASVSGFARIID
RTVYLVGPEQKTEIRNGSNVVIKADEYVPPGKTVATFDPFTEPILAEQDG
FVRYEDIILGSTLIEEVNTETGMVERRITTLKTGIQLQPRVFISDESGNA
LGSYYLPEEARLMVEEGAQVKAGTVIVKLAKAIQKTSDITGGLPRVSELF
EARRPKNAAVLAQISGVVSFKGLFKGKRIVVVRDHYGKEYKHLVSMSRQL
LVRDGDTVEAGERLCDGCFDPHDILAILGENALQNYLMNEIRDVYRVQGV
SINDQHIGLVVRQMLRKTEVVSVGDTRFIYGQQVDKYRFHEENRRVEAEG
GQPAVARPMFQGITKAALNIDSFISAASFQETNKVLTNAAIAGSVDDLCG
LKENVIIGHLIPAGTGMRRYRQVKLFDKNKRDLDVQMEEVIRRRKLEEEA
LAQAVAGMEGEPEGEA
>TPASS_0493 rpoD, RNA polymerase sigma-70 factor
MMELSRTPAVMRLLEYAREKKAITHDEVENILAHYGVETEELLHDVLDML
EQENIKVFSSEEEELEDEVFAGLKGPAADDGDGSFPLSTERVRDKLCDSS
RGARQNLLSNARNIALDDPVKLYLRDIGQEKLLTAEQEVMLSKRMEEGEG
IIKDIITQSGLLLPEFYHIGRSLSKKALAVLDPAESGRTRKEISEEMADR
RRLKQAYGEVLRSLYPEMRHYMAMKKRLDERGEPVTVLSSDEEVCKQRDK
LLSCLQKVDLQLEEIDRFSRKFLDTARKIREYKRRKDRHEKQLMIADLCD
MRKIGRGLAVPRQRAKLEETLGMSADCIQEIYTQIQKVTRRLRRIEYDFE
NTIDGILSMARAIHRGHVMLKKAKDKLINANLRLVVSIAKKYTNRGLLFF
DLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSISDQARTIRV
PVHMIEQINKVTRESRQLLQKFGREPSDEEIAQQLCWTVEKVKQVKSVAR
EPISLETPIGEEEDSSLGDFVPDADVENPSRVTERVLLKEEVRSILSALP
AREHEVLRMRFGLDGDYSQTLEEVGLYFDVTRERIRQIEAKALKRLRHPR
HSRRLKDFLDS
>TPASS_0092 rpoE, RNA polymerase sigma-24 factor
MYEQLVPVLYRVAYNVVREEDIAEGLCHDAFIAMTEKRMEFPSLSDAKYW
LIRVVKNASLNYAKRRVRERHSCEQASREHVCEPDTGELRLLRIETIEQV
RAALDRLPEHLRVVLQLREYGDLNYKEIGRILGISEGNVKVRVFRARERL
AKYLGETDAYLS
>TPASS_0111 rpoN, RNA polymerase sigma-54 factor
MQQLVQQQRLVLNQRLVHGLCLLQLSRGDLKTEVLRAVQRNPLLEIRPSS
ARRTGKACYLSLGDRRERMRARDRFQQLLENQPDKQVDNIRAVLREQVFY
QKHEAIVLDLACAFIQMLDDHGFFSISPAIFQNMCGSMPTALQEKIPQAI
ALIQRLEPQGCAVFNFKESLAVQARLRFERFSDPLYRCVINLLTHHSELL
FCSDNMCDGRVSVHALTTQINSMGLCVQKVSSNDVKDILLLIKELHPFPG
KCVSNAQRADTNMLLEPDVLITKTAHGFVTQINCTGIPTVVFRNDYCMHS
KAAEKNHALKACMHDALSLVSMLSYRERTLLDIAKTIVHYQCGFFDHGPA
KLTPLRMTDVAHRTGLSVSTVSRIVRDKWLQYGSQHFSLRYFFSPRVLST
EEYRDRSSLGQNYPSSPHSKVSVKYRISRLIQEVRTQRISLSDRRIAQLL
GEQGIKCARRTVNKYRSELRTCSSS
>TPASS_1012 sigA, RNA polymerase sigma-43 factor
MLSIWYVPFEQKEYSVRQMQFRHDENTLTAYLNDLKRIPLMNEKEEYACA
CAAYAGDAQAKNALVRANVRFVISVARHYRTCGLPLADLISEGNIGLLTA
AERFNPARGCRFISYAACWIRQSILKALNEKARIIRLPVSRIRAAKSTYE
YIPPVTSVNVGISKTQGGNRYGKRRATMCRAVPTVEEVHIWHTPLSLDAP
LGASGSRGESGDVDGLRIGDCVPDDLYAQPEEHMLACALQADIAKILRLL
PARDAQVIRYRFGLGGYERRSLQEIGEIFQITKERVRQIEKKALLRIRSC
ARQHRLDSYIA
>TPASS_0344 trcF, transcription-repair coupling factor
MRGILHSWNELQHALRSLRAARFPYRVEGCTGGLRSYFFGEYVRTCCAHI
VLVVPTEQDVAAVCTDLAHAAVPTRVLPWWGSLPYRPVSPNAHVFSHRVE
ALCALAQRDATAPCAFVFTQRALLTPVPPLDYVRTLKRSFRVGEHIEIHT
LAAQLMQWGYARVDHVSACAEFSLRGEILDIAAAAQAADNTQAYRIVCDF
NTIERIHILAVSTCAVLQEVSACTLYAAKEILWSEERIAFLHQNLQKLSE
CPAHCVPCIEELTHRKTYEGEEMFYPLCFERPTCVLEYFRHSPSPPSVFY
LDYERQHNGARALQDECRNLYHKMQLAHEHVPARWYPQPEHIVLDFSAVC
ALHLHTVYFTHFFPQLPACESICLASDPARSFFGNIPYFKEELLRLSKDG
WHVFVFAESEQQALRIRALVKGCDVTVLPCALSAGFSIPALKILIVQEGE
IFGRRRKTPQSVQRARSTPIDTFVELNPGDYVVHAQYGIGLFKGIERIKT
AQSERDYVNLLYAQEETILIPIEQAHLVQRYIGNEGNKPHLDSLGSKSWE
TRKARVKKSVENIAQKLVELYSLRKTTRGHAFPKDDEWQYAFEAAFPYEE
TDDQRICIEEVKQDMQEAVPMDRLVCGDVGYGKTEIAMRAAFKAVMGGKQ
VVFLTPTTLLVEQHFRTICNRFKHFPVRIEKLSRFVPKSEQKDILAKLAH
GDIDLIVGTHRLIQKDVSFKDLGLMILDEEQRFGVQDKEKLKQMKTNVDC
LSLSATPIPRTLHMGMLKIRDMSLLTTPPEGRLPIETVIQQFDPNLVATA
IRKELDREGQIFYLHNRIENLESVKCMLQKLVPELSICVAHSLMGSEELE
DIFERFYQKTFQLLLSTTIIENGIDVPNANTIIIDRADMYGVSQLYQLRG
RVGRSDKKAYAYLLYYHDVALSDLAIKRLQVISDFTDLGAGFKVALKDME
IRGVGNLLGKEQSGDIYSVGFDLYVQLLEEAIERLQHAPNEQRIETVIDL
NYRGFIPHTYIAADEIKMELYKKIAAAHTHEELERIRTETITRFGPIPEE
AAGLFTVAEIKVRCEKLAILSLKETHESLLIEFDKVCDTAFKKILRLVQT
SNDRVRLDAKQPNMLILTSDAIEIKEKGIFICEILKRLES
>TPASS_0167 troR, cation-activated repressor protein
MSLVSDIAAENYLKTVVKALARSRRERVGTGELSRLLHVTPGTISTMVKR
LEKGGYVQRTHRLGCTLTRKGAVFGSAVLRKHRLLESFLSQVLCLEAGVV
HKEAEMLEHACSDELIDVIDRYLQYPTRDPHGQPIPRKDTLLDLYVEDDV
PGV