SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: G1a07d05.r1

Number of genes found: 12

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia garinii, PBi

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
BGP195		hypothetical protein	G1a07d05.r1	CDS	41	141	+	0.283688
BGP196		hypothetical protein	G1a07d05.r1	CDS	181	123	+	0.365854
BGP197		hypothetical protein	G1a07d05.r1	CDS	506	273	+	0.260073
BGP198		hypothetical protein	G1a07d05.r1	CDS	726	228	+	0.280702
BGP199		hypothetical protein	G1a07d05.r1	CDS	2140	3585	-	0.247699
BGP200		hypothetical protein	G1a07d05.r1	CDS	5840	357	-	0.260504
BGP201		hypothetical protein	G1a07d05.r1	CDS	6141	192	-	0.21875
BGP202		hypothetical protein	G1a07d05.r1	CDS	6811	612	-	0.186275
BGP203		hypothetical protein	G1a07d05.r1	CDS	7403	78	-	0.192308
BGP204		hypothetical protein	G1a07d05.r1	CDS	8141	174	-	0.281609
BGP205		hypothetical protein	G1a07d05.r1	CDS	8337	528	+	0.232955
BGP206		hypothetical protein	G1a07d05.r1	CDS	8857	318	+	0.213836