SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: cp26

Number of genes found: 26

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia garinii, PBi

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BGB09	conserved hypothetical protein	cp26	CDS	6570	1044	+	0.230843
NA	BGB19	conserved hypothetical protein	cp26	CDS	18596	1356	-	0.304572
NA	BGB01	conserved hypothetical protein	cp26	CDS	45	282	+	0.230496
NA	BGB03	conserved hypothetical protein	cp26	CDS	844	1350	-	0.237037
NA	BGB08	conserved hypothetical protein	cp26	CDS	5796	633	-	0.197472
NA	BGB12	conserved hypothetical protein	cp26	CDS	9157	762	+	0.245407
NA	BGB20	conserved hypothetical protein	cp26	CDS	20061	1356	-	0.294248
NA	BGB21	conserved hypothetical protein	cp26	CDS	21484	507	-	0.203156
NA	BGB14	conserved hypothetical protein	cp26	CDS	10804	516	-	0.257752
NA	BGB02	conserved hypothetical protein	cp26	CDS	310	447	-	0.246085
NA	BGB23	conserved hypothetical protein	cp26	CDS	22524	696	+	0.225575
NA	BGB07	outer surface protein, putative	cp26	CDS	4678	1098	+	0.290528
NA	BGB24	conserved hypothetical protein	cp26	CDS	23229	552	-	0.246377
NA	BGB25	conserved hypothetical protein	cp26	CDS	24096	1041	+	0.222863
NA	BGB22	conserved hypothetical protein	cp26	CDS	21965	486	-	0.216049
NA	BGB10	conserved hypothetical protein	cp26	CDS	7729	945	+	0.202116
NA	BGB11	conserved hypothetical protein	cp26	CDS	8663	519	+	0.186898
NA	BGB13	conserved hypothetical protein	cp26	CDS	9986	549	+	0.176685
celA	BGB06	PTS system, cellobiose-specific IIB component	cp26	CDS	4349	318	+	0.330189
celB	BGB04	PTS system, cellobiose-specific IIC component	cp26	CDS	2471	1332	-	0.316817
celC	BGB05	PTS system, cellobiose-specific IIA	cp26	CDS	3993	348	+	0.304598
guaA	BGB17	GMP synthase	cp26	CDS	15721	1587	-	0.295526
guaB	BGB16	IMP dehydrogenase	cp26	CDS	14482	1215	-	0.335802
malX	BGB26	PTS system, maltose and glucose-specific IIABC component	cp26	CDS	25437	1629	+	0.33763
oppAIV	BGB15	oligopeptide ABC transporter, periplasmic oligopeptide-binding protein	cp26	CDS	12545	1602	+	0.296504
ospC	BGB18	outer surface protein C	cp26	CDS	17531	624	+	0.310897