SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: PKO134-g-b-19e02.r1

Number of genes found: 14

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia afzelii, PKo

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BAPKO_6011	hypothetical protein	PKO134-g-b-19e02.r1	CDS	7393	87	-	0.425287
NA	BAPKO_6001	hypothetical protein	PKO134-g-b-19e02.r1	CDS	469	687	-	0.276565
NA	BAPKO_6013	hypothetical protein	PKO134-g-b-19e02.r1	CDS	7774	756	-	0.494709
NA	BAPKO_6009	hypothetical protein	PKO134-g-b-19e02.r1	CDS	5920	192	-	0.208333
NA	BAPKO_6003	hypothetical protein	PKO134-g-b-19e02.r1	CDS	1460	504	-	0.232143
NA	BAPKO_6007	hypothetical protein	PKO134-g-b-19e02.r1	CDS	4766	564	-	0.25
NA	BAPKO_6004	hypothetical protein	PKO134-g-b-19e02.r1	CDS	1994	801	-	0.229713
NA	BAPKO_6002	hypothetical protein	PKO134-g-b-19e02.r1	CDS	1181	216	-	0.277778
NA	BAPKO_6006	hypothetical protein	PKO134-g-b-19e02.r1	CDS	4157	579	-	0.221071
NA	BAPKO_6000	hypothetical protein	PKO134-g-b-19e02.r1	CDS	33	444	-	0.277027
NA	BAPKO_6008	hypothetical protein	PKO134-g-b-19e02.r1	CDS	5403	180	-	0.277778
NA	BAPKO_6005	hypothetical protein	PKO134-g-b-19e02.r1	CDS	3094	735	-	0.235374
NA	BAPKO_6012	hypothetical protein	PKO134-g-b-19e02.r1	CDS	7476	324	-	0.530864
NA	BAPKO_6010	hypothetical protein	PKO134-g-b-19e02.r1	CDS	6121	1092	-	0.190476