SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

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+ Horizontal gene transfer (predicted by SIGI-HMM)

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+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

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+ Protein variations (protein-based analysis)

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+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: PKO134-G-p-1.p318

Number of genes found: 24

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia afzelii, PKo

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BAPKO_6033	hypothetical protein	PKO134-G-p-1.p318	CDS	7831	114	+	0.324561
NA	BAPKO_6040	hypothetical protein	PKO134-G-p-1.p318	CDS	12671	249	-	0.240964
NA	BAPKO_6043	hypothetical protein	PKO134-G-p-1.p318	CDS	15201	150	+	0.306667
NA	BAPKO_6032	hypothetical protein	PKO134-G-p-1.p318	CDS	7678	138	+	0.384058
NA	BAPKO_6031	hypothetical protein	PKO134-G-p-1.p318	CDS	7485	168	+	0.386905
NA	BAPKO_6029	hypothetical protein	PKO134-G-p-1.p318	CDS	7091	210	+	0.366667
NA	BAPKO_6028	hypothetical protein	PKO134-G-p-1.p318	CDS	5813	294	+	0.27551
NA	BAPKO_6041	hypothetical protein	PKO134-G-p-1.p318	CDS	13048	138	-	0.166667
NA	BAPKO_6022	hypothetical protein	PKO134-G-p-1.p318	CDS	1061	87	-	0.252874
NA	BAPKO_6030	hypothetical protein	PKO134-G-p-1.p318	CDS	7366	117	+	0.350427
NA	BAPKO_6039	hypothetical protein	PKO134-G-p-1.p318	CDS	11164	1101	-	0.200727
NA	BAPKO_6038	hypothetical protein	PKO134-G-p-1.p318	CDS	10582	573	-	0.239092
NA	BAPKO_6023	hypothetical protein	PKO134-G-p-1.p318	CDS	1454	1077	+	0.214485
NA	BAPKO_6026	hypothetical protein	PKO134-G-p-1.p318	CDS	3750	84	+	0.238095
NA	BAPKO_6021	hypothetical protein	PKO134-G-p-1.p318	CDS	168	99	-	0.252525
NA	BAPKO_6042	hypothetical protein	PKO134-G-p-1.p318	CDS	13568	687	-	0.358079
NA	BAPKO_6036	hypothetical protein	PKO134-G-p-1.p318	CDS	9261	540	-	0.224074
NA	BAPKO_6037	hypothetical protein	PKO134-G-p-1.p318	CDS	9854	768	-	0.28125
NA	BAPKO_6024	hypothetical protein	PKO134-G-p-1.p318	CDS	2540	564	+	0.207447
NA	BAPKO_6025	hypothetical protein	PKO134-G-p-1.p318	CDS	3301	105	+	0.219048
NA	BAPKO_6035	hypothetical protein	PKO134-G-p-1.p318	CDS	8788	180	-	0.4
NA	BAPKO_6027	hypothetical protein	PKO134-G-p-1.p318	CDS	4269	561	-	0.299465
NA	BAPKO_6034	hypothetical protein	PKO134-G-p-1.p318	CDS	8189	231	+	0.329004
NA	BAPKO_6020	hypothetical protein	PKO134-G-p-1.p318	CDS	1	184	-	0.184783