SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

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+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

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+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: PBI300a21a10.s1

Number of genes found: 21

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia garinii High passage (300), PBi

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	PBI300a21a10.s1_21	hypothetical protein	PBI300a21a10.s1	CDS	20733	825	-	0.261818
NA	PBI300a21a10.s1_4	hypothetical protein	PBI300a21a10.s1	CDS	4324	252	+	0.293651
NA	PBI300a21a10.s1_9	hypothetical protein	PBI300a21a10.s1	CDS	8004	528	-	0.229167
NA	PBI300a21a10.s1_16	hypothetical protein	PBI300a21a10.s1	CDS	11934	1908	+	0.23847
NA	PBI300a21a10.s1_14	hypothetical protein	PBI300a21a10.s1	CDS	10228	825	+	0.252121
NA	PBI300a21a10.s1_5	hypothetical protein	PBI300a21a10.s1	CDS	5491	345	-	0.26087
NA	PBI300a21a10.s1_3	hypothetical protein	PBI300a21a10.s1	CDS	2128	822	+	0.291971
NA	PBI300a21a10.s1_20	hypothetical protein	PBI300a21a10.s1	CDS	19237	333	-	0.231231
NA	PBI300a21a10.s1_6	hypothetical protein	PBI300a21a10.s1	CDS	6002	621	-	0.236715
NA	PBI300a21a10.s1_19	hypothetical protein	PBI300a21a10.s1	CDS	18273	195	+	0.179487
NA	PBI300a21a10.s1_12	hypothetical protein	PBI300a21a10.s1	CDS	9620	204	+	0.230392
NA	PBI300a21a10.s1_10	hypothetical protein	PBI300a21a10.s1	CDS	8533	351	+	0.239316
NA	PBI300a21a10.s1_1	hypothetical protein	PBI300a21a10.s1	CDS	692	117	+	0.333333
NA	PBI300a21a10.s1_8	hypothetical protein	PBI300a21a10.s1	CDS	7448	564	-	0.216312
NA	PBI300a21a10.s1_18	hypothetical protein	PBI300a21a10.s1	CDS	17133	120	+	0.225
NA	PBI300a21a10.s1_17	hypothetical protein	PBI300a21a10.s1	CDS	14667	900	-	0.251111
NA	PBI300a21a10.s1_7	hypothetical protein	PBI300a21a10.s1	CDS	6720	756	-	0.231481
NA	PBI300a21a10.s1_2	hypothetical protein	PBI300a21a10.s1	CDS	1264	555	-	0.304505
NA	PBI300a21a10.s1_15	hypothetical protein	PBI300a21a10.s1	CDS	11247	450	+	0.288889
NA	PBI300a21a10.s1_11	hypothetical protein	PBI300a21a10.s1	CDS	8811	108	-	0.212963
NA	PBI300a21a10.s1_13	hypothetical protein	PBI300a21a10.s1	CDS	9872	312	+	0.24359