SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: lp25

Number of genes found: 29

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia burgdorferi, B31

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BB_E09	protein p23	lp25	CDS	6898	864	+	0.248843
NA	BB_E23	predicted coding region BBE23	lp25	CDS	15973	186	+	0.231183
NA	BB_E11	predicted coding region BBE11	lp25	CDS	8312	135	-	0.244444
NA	BB_E25	predicted coding region BBE25	lp25	CDS	18502	105	-	0.180952
NA	BB_E20	conserved hypothetical protein	lp25	CDS	12830	564	-	0.212766
NA	BB_E18	conserved hypothetical protein	lp25	CDS	11498	582	-	0.243986
NA	BB_E17	predicted coding region BBE17	lp25	CDS	10200	510	-	0.258824
NA	BB_E08	predicted coding region BBE08	lp25	CDS	6555	147	-	0.231293
NA	BB_E21	conserved hypothetical protein	lp25	CDS	13403	1128	-	0.235816
NA	BB_E02	predicted coding region BBE02	lp25	CDS	323	3834	-	0.244131
NA	BB_E03	predicted coding region BBE03	lp25	CDS	4419	195	-	0.25641
NA	BB_E15	predicted coding region BBE15	lp25	CDS	9353	138	-	0.253623
NA	BB_E01	predicted coding region BBE01	lp25	CDS	154	102	-	0.245098
NA	BB_E05	predicted coding region BBE05	lp25	CDS	5377	153	+	0.254902
NA	BB_E22	pyrazinamidase/nicotinamidase (pncA)	lp25	CDS	15042	537	-	0.303538
NA	BB_E07	predicted coding region BBE07	lp25	CDS	6182	174	-	0.275862
NA	BB_E10	predicted coding region BBE10	lp25	CDS	7874	99	-	0.242424
NA	BB_E26	predicted coding region BBE26	lp25	CDS	18586	129	+	0.302326
NA	BB_E31	antigen, P35, putative	lp25	CDS	21946	732	-	0.254098
NA	BB_E04	predicted coding region BBE04	lp25	CDS	4719	141	+	0.297872
NA	BB_E13	predicted coding region BBE13	lp25	CDS	8863	96	+	0.25
NA	BB_E19	conserved hypothetical protein	lp25	CDS	12096	759	-	0.270092
NA	BB_E30	predicted coding region BBE30	lp25	CDS	21558	147	+	0.197279
NA	BB_E28	predicted coding region BBE28	lp25	CDS	19337	153	-	0.261438
NA	BB_E06	predicted coding region BBE06	lp25	CDS	5757	150	+	0.26
NA	BB_E12	predicted coding region BBE12	lp25	CDS	8521	126	-	0.206349
NA	BB_E14	predicted coding region BBE14	lp25	CDS	9163	216	+	0.240741
NA	BB_E16	predicted coding region BBE16	lp25	CDS	9567	621	-	0.236715
NA	BB_E27	predicted coding region BBE27	lp25	CDS	19055	144	+	0.208333