SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: cp9

Number of genes found: 11

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia burgdorferi, B31

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BB_C01	conserved hypothetical protein	cp9	CDS	163	1110	+	0.210811
NA	BB_C02	conserved hypothetical protein	cp9	CDS	1282	558	+	0.229391
NA	BB_C03	conserved hypothetical protein	cp9	CDS	1892	561	+	0.224599
NA	BB_C10	rev protein (rev)	cp9	CDS	6281	528	-	0.270833
NA	BB_C11	conserved hypothetical protein	cp9	CDS	6974	798	+	0.258145
NA	BB_C05	conserved hypothetical protein	cp9	CDS	2804	909	+	0.288229
NA	BB_C04	predicted coding region BBC04	cp9	CDS	2590	111	-	0.234234
NA	BB_C12	conserved hypothetical protein	cp9	CDS	7911	1293	-	0.258314
NA	BB_C07	predicted coding region BBC07	cp9	CDS	4504	285	-	0.214035
NA	BB_C06	exported protein A (eppA)	cp9	CDS	3853	525	-	0.249524
NA	BB_C08	conserved hypothetical protein	cp9	CDS	5534	447	+	0.225951