SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: lp17

Number of genes found: 23

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia burgdorferi, B31

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BB_D11	conserved hypothetical protein	lp17	CDS	6681	954	+	0.237945
NA	BB_D09	conserved hypothetical protein	lp17	CDS	5058	684	+	0.226608
NA	BB_D18	conserved hypothetical protein	lp17	CDS	10986	663	-	0.273002
NA	BB_D19	predicted coding region BBD19	lp17	CDS	12057	114	+	0.175439
NA	BB_D12	predicted coding region BBD12	lp17	CDS	7621	132	-	0.30303
NA	BB_D21	conserved hypothetical protein	lp17	CDS	13341	741	+	0.298246
NA	BB_D03	predicted coding region BBD03	lp17	CDS	1117	105	+	0.2
NA	BB_D07	predicted coding region BBD07	lp17	CDS	4257	117	-	0.188034
NA	BB_D05	conserved hypothetical protein	lp17	CDS	2389	156	+	0.24359
NA	BB_D22	conserved hypothetical protein	lp17	CDS	14072	270	+	0.255556
NA	BB_D14	conserved hypothetical protein	lp17	CDS	8269	1113	+	0.212938
NA	BB_D15	conserved hypothetical protein	lp17	CDS	9593	423	-	0.217494
NA	BB_D24	conserved hypothetical protein	lp17	CDS	15891	231	-	0.168831
NA	BB_D16	predicted coding region BBD16	lp17	CDS	10425	96	-	0.291667
NA	BB_D25	predicted coding region BBD25	lp17	CDS	16212	159	+	0.232704
NA	BB_D01	conserved hypothetical protein	lp17	CDS	332	474	+	0.280591
NA	BB_D04	conserved hypothetical protein	lp17	CDS	1412	357	+	0.22409
NA	BB_D06	conserved hypothetical protein	lp17	CDS	3143	465	+	0.206452
NA	BB_D17	predicted coding region BBD17	lp17	CDS	10591	96	+	0.239583
NA	BB_D08	predicted coding region BBD08	lp17	CDS	4707	99	+	0.222222
NA	BB_D10	conserved hypothetical protein	lp17	CDS	5876	579	-	0.250432
NA	BB_D13	conserved hypothetical protein	lp17	CDS	7787	327	+	0.259939
NA	BB_D02	predicted coding region BBD02	lp17	CDS	873	150	+	0.26