SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: lp21

Number of genes found: 11

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia burgdorferi, B31

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BB_U09	conserved hypothetical protein	lp21	CDS	16228	321	-	0.29595
NA	BB_U06	conserved hypothetical protein	lp21	CDS	14633	603	+	0.19403
NA	BB_U01	hypothetical protein	lp21	CDS	184	435	+	0.195402
NA	BB_U08	hypothetical protein	lp21	CDS	15791	294	+	0.214286
NA	BB_U03	hypothetical protein	lp21	CDS	1238	120	-	0.308333
NA	BB_U07	conserved hypothetical protein	lp21	CDS	15349	465	+	0.223656
NA	BB_U05	plasmid partition protein, putative	lp21	CDS	2868	789	+	0.264892
NA	BB_U04	conserved hypothetical protein	lp21	CDS	1486	1143	+	0.219598
NA	BB_U10	hypothetical protein	lp21	CDS	16603	198	+	0.181818
NA	BB_U02	hypothetical protein	lp21	CDS	746	369	+	0.254743
NA	BB_U11	conserved hypothetical protein	lp21	CDS	16886	993	+	0.267875