SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: pl11

Number of genes found: 8

Free access


Hide UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	UniProt / TrEMBL protein name	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_16001	antigen P35-like protein, lipoprotein	SubName: Full=Antigen P35-like protein, lipoprotein;	pl11	CDS	974	852	+	0.284038
NA	BDU_16008	immunogenic protein P35	SubName: Full=Immunogenic protein P35; Flags: Fragment;	pl11	CDS	10384	843	+	0.278766
NA	BDU_16003	Probable lipoprotein	SubName: Full=Probable lipoprotein;	pl11	CDS	5012	819	-	0.247863
NA	BDU_16005	putative lipoprotein	SubName: Full=Putative lipoprotein;	pl11	CDS	7128	783	-	0.263091
NA	BDU_16007	uncharacterized conserved protein	SubName: Full=Uncharacterized conserved protein;	pl11	CDS	9662	594	+	0.296296
NA	BDU_16006	uncharacterized conserved protein	SubName: Full=Uncharacterized conserved protein;	pl11	CDS	8183	930	+	0.307527
NA	BDU_16002	putative lipoprotein	SubName: Full=Putative lipoprotein;	pl11	CDS	2252	996	-	0.266064
thyl	BDU_16004	thymidylate synthase-complementing protein	RecName: Full=Thymidylate synthase ThyX; Short=TS; Short=TSase; EC=2.1.1.148;	pl11	CDS	6055	834	-	0.273381