SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: pl23

Number of genes found: 22

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_13010	uncharacterized conserved protein	pl23	CDS	8987	1263	+	0.21536
NA	BDU_13016	uncharacterized conserved protein	pl23	CDS	15929	939	+	0.259851
NA	BDU_13009	putative lipoprotein	pl23	CDS	8324	567	-	0.239859
NA	BDU_13002	uncharacterized conserved protein	pl23	CDS	1303	966	-	0.258799
NA	BDU_13013	uncharacterized conserved protein	pl23	CDS	13035	492	-	0.221545
NA	BDU_13015	uncharacterized conserved protein	pl23	CDS	15027	642	-	0.224299
NA	BDU_13005	guanine-hypoxanthine permease	pl23	CDS	5087	1356	-	0.30531
NA	BDU_13006	uncharacterized conserved protein	pl23	CDS	6564	459	-	0.233115
NA	BDU_13020	uncharacterized conserved protein	pl23	CDS	19227	528	-	0.232955
NA	BDU_13007	putative lipoprotein	pl23	CDS	7061	513	-	0.251462
NA	BDU_13001	uncharacterized conserved protein	pl23	CDS	623	258	-	0.255814
NA	BDU_13004		pl23	pseudo	4028	417	-	0.338129
NA	BDU_13008	uncharacterized conserved protein	pl23	CDS	7620	693	+	0.242424
acyP	BDU_13012	acylphosphatase	pl23	CDS	12776	285	+	0.252632
guaB	BDU_13003	inosine-5'-monophosphate dehydrogenase	pl23	CDS	2544	1452	-	0.332645
malX	BDU_13011	PTS system, maltose and glucose-specific IIABC component	pl23	CDS	11062	1632	+	0.333946
pf32	BDU_13018	PF32 plasmid partition protein	pl23	CDS	17435	765	+	0.247059
pf49	BDU_13019	PF49 plasmid partition protein	pl23	CDS	18255	555	+	0.25045
ppap1	BDU_13017	plasmid partitioning associated protein-1	pl23	CDS	16899	561	+	0.272727
resT	BDU_13014	telomere resolvase	pl23	CDS	13582	1359	-	0.257542
vlp	BDU_13022	vlp protein	pl23	CDS	22345	959	+	0.354536
vlp-d	BDU_13021	vlp protein, delta subfamily	pl23	CDS	20445	1038	+	0.370906