SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: pl35

Number of genes found: 32

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_7021		pl35	pseudo	22634	669	-	0.373692
NA	BDU_7009		pl35	pseudo	10346	1085	-	0.399078
NA	BDU_7030	hypothetical protein	pl35	CDS	32234	1635	+	0.304587
NA	BDU_7031	uncharacterized conserved protein	pl35	CDS	33865	564	+	0.299645
NA	BDU_7002		pl35	pseudo	2538	255	-	0.286275
NA	BDU_7018		pl35	pseudo	20712	147	-	0.367347
NA	BDU_7010		pl35	pseudo	11174	258	-	0.383721
NA	BDU_7028		pl35	pseudo	29802	492	-	0.223577
NA	BDU_7019	uncharacterized conserved protein	pl35	CDS	21109	258	-	0.341085
NA	BDU_7016		pl35	pseudo	18214	1092	-	0.387363
NA	BDU_7029		pl35	pseudo	30740	608	-	0.261513
NA	BDU_7001	antigen P35-like protein	pl35	CDS	1224	855	-	0.263158
NA	BDU_7020	uncharacterized conserved protein	pl35	CDS	21376	957	-	0.284222
NA	BDU_7015		pl35	pseudo	17286	793	-	0.383354
NA	BDU_7006		pl35	pseudo	6609	858	-	0.367133
NA	BDU_7011		pl35	pseudo	11645	549	-	0.409836
NA	BDU_7014		pl35	pseudo	15641	1096	-	0.398723
NA	BDU_7017		pl35	pseudo	19507	963	-	0.383178
bdr	BDU_7032	bdr protein	pl35	CDS	34500	600	-	0.235
pf32	BDU_7026	PF32 plasmid partition protein	pl35	CDS	28473	765	-	0.24183
pf49	BDU_7025	PF49 plasmid partition protein	pl35	CDS	27851	618	-	0.250809
ppap1	BDU_7027	plasmid partitioning associated protein-1	pl35	CDS	29213	561	-	0.235294
vlp-b	BDU_7004	vlp protein, beta subfamily	pl35	CDS	4050	1155	-	0.384416
vlp-c_1	BDU_7007	vlp protein, gamma subfamily	pl35	CDS	7752	1068	-	0.396067
vlp-c_2	BDU_7012	vlp protein, gamma subfamily	pl35	CDS	12687	1173	-	0.387042
vlp-c_3	BDU_7024	vlp protein, gamma subfamily	pl35	CDS	26095	942	-	0.38535
vlp-d_1	BDU_7005	vlp protein, delta subfamily	pl35	CDS	5397	1029	-	0.377065
vlp-d_2	BDU_7008	vlp protein, delta subfamily	pl35	CDS	9031	1026	-	0.379142
vlp-d_3	BDU_7013	vlp protein, delta subfamily	pl35	CDS	14055	1005	-	0.368159
vlp-d_4	BDU_7022	vlp protein, delta subfamily	pl35	CDS	23528	1077	-	0.37883
vlp-d_5	BDU_7023	vlp protein, delta subfamily	pl35	CDS	24794	951	-	0.362776
vsp	BDU_7003	vsp protein	pl35	CDS	3114	828	-	0.362319