SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: pl36

Number of genes found: 26

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_6007		pl36	pseudo	7373	827	-	0.376058
NA	BDU_6005		pl36	pseudo	4441	768	-	0.377604
NA	BDU_6026	hypothetical protein	pl36	CDS	35296	536	+	0.291045
NA	BDU_6012	ORFk-like protein	pl36	CDS	14444	558	+	0.234767
NA	BDU_6004		pl36	pseudo	3710	225	-	0.337778
NA	BDU_6018	uncharacterized conserved protein	pl36	CDS	21449	945	+	0.297354
NA	BDU_6001	hypothetical protein	pl36	CDS	70	441	+	0.222222
NA	BDU_6019	uncharacterized conserved protein	pl36	CDS	23764	1065	+	0.271362
NA	BDU_6024		pl36	pseudo	32462	881	+	0.397276
NA	BDU_6017	uncharacterized conserved protein	pl36	CDS	19404	945	-	0.266667
NA	BDU_6003		pl36	pseudo	2847	804	-	0.373134
NA	BDU_6011		pl36	pseudo	13059	852	-	0.39554
bdr	BDU_6020	bdr protein	pl36	CDS	26192	657	-	0.245053
pf32	BDU_6015	PF32 plasmid partition protein	pl36	CDS	17319	762	+	0.265092
pf49	BDU_6016	PF49 plasmid partition protein	pl36	CDS	18115	546	+	0.208791
ppap1	BDU_6014	plasmid partitioning associated protein 1	pl36	CDS	16783	561	+	0.237077
ppap2	BDU_6013	plasmid partitioning associated protein 2	pl36	CDS	15703	1071	+	0.246499
vlp-a_1	BDU_6008	vlp protein, alpha subfamily	pl36	CDS	8977	1074	-	0.366853
vlp-a_2	BDU_6010	vlp protein, alpha subfamily	pl36	CDS	11531	1143	-	0.391951
vlp-a_3	BDU_6023	vlp protein, alpha subfamily	pl36	CDS	29981	1146	+	0.38918
vlp-c	BDU_6022	vlp protein, gamma subfamily	pl36	CDS	28466	978	+	0.376278
vlp-d_1	BDU_6002	vlp protein, delta subfamily	pl36	CDS	1058	1005	-	0.379104
vlp-d_2	BDU_6006	vlp protein, delta subfamily	pl36	CDS	6135	1053	-	0.368471
vlp-d_3	BDU_6009	vlp protein, delta subfamily	pl36	CDS	10263	1032	-	0.369186
vsp_1	BDU_6021	vsp protein	pl36	CDS	27404	483	+	0.343685
vsp_2	BDU_6025	vsp protein	pl36	CDS	33423	672	+	0.331845