SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: pl31

Number of genes found: 33

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_9024		pl31	pseudo	19365	1351	+	0.26943
NA	BDU_9031		pl31	pseudo	26820	1158	+	0.274611
NA	BDU_9029	ORFk-like protein, lipoprotein	pl31	CDS	25422	693	-	0.278499
NA	BDU_9023		pl31	pseudo	18834	288	+	0.315972
NA	BDU_9028		pl31	pseudo	24386	653	+	0.390505
NA	BDU_9004		pl31	pseudo	3471	498	-	0.281125
NA	BDU_9003		pl31	pseudo	2925	394	-	0.28934
NA	BDU_9018	uncharacterized conserved protein	pl31	CDS	14754	369	-	0.257453
NA	BDU_9005	ORFk-like protein, lipoprotein	pl31	CDS	4124	651	+	0.274962
NA	BDU_9002		pl31	pseudo	1461	1122	-	0.384135
NA	BDU_9019		pl31	pseudo	15696	357	+	0.268908
NA	BDU_9022	ORFk-like protein, lipoprotein	pl31	CDS	17960	699	-	0.276109
NA	BDU_9030	family 115-like protein	pl31	CDS	26269	540	+	0.285185
NA	BDU_9016	uncharacterized conserved protein	pl31	CDS	13649	885	+	0.242938
NA	BDU_9017		pl31	pseudo	14500	219	+	0.251142
NA	BDU_9007		pl31	pseudo	5763	760	+	0.246053
NA	BDU_9006	MlpL-like protein	pl31	CDS	5019	432	+	0.233796
NA	BDU_9011		pl31	pseudo	8874	1084	-	0.259225
NA	BDU_9020		pl31	pseudo	16051	261	+	0.252874
NA	BDU_9021		pl31	pseudo	16466	448	-	0.258929
bdr_1	BDU_9025	bdr protein	pl31	CDS	20759	639	+	0.255086
bdr_2	BDU_9032	bdr protein	pl31	CDS	28021	561	+	0.272727
bppB	BDU_9009	BppB protein	pl31	CDS	7476	483	-	0.254658
mlpJ	BDU_9008	MlpJ protein	pl31	CDS	6848	579	+	0.274611
pf32	BDU_9013	PF32 plasmid partition protein	pl31	CDS	11033	774	-	0.257106
pf49	BDU_9012	PF49 plasmid partition protein	pl31	CDS	10450	525	-	0.238095
ppap1	BDU_9014	plasmid partitioning associated protein-1	pl31	CDS	11782	561	-	0.247772
ppap2	BDU_9015	plasmid partitioning associated protein-2	pl31	CDS	12352	1167	-	0.258783
ssb	BDU_9010	single stranded DNA-binding protein	pl31	CDS	8004	474	-	0.305907
vlp-c_1	BDU_9027	vlp protein, gamma subfamily	pl31	CDS	23140	1125	+	0.384889
vlp-c_2	BDU_9033	vlp protein, gamma subfamily	pl31	CDS	29081	1107	+	0.390244
vlp-d	BDU_9001	vlp protein, delta subfamily	pl31	CDS	165	1050	-	0.364762
vsp	BDU_9026	vsp protein	pl31	CDS	22011	609	+	0.376026