SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: pl32

Number of genes found: 31

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia duttonii Ly, Ly

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BDU_8031	hypothetical protein	pl32	CDS	31150	270	+	0.314815
NA	BDU_8017	hypothetical protein	pl32	CDS	17615	138	+	0.275362
NA	BDU_8030	hypothetical protein	pl32	CDS	30727	264	-	0.193182
NA	BDU_8018		pl32	pseudo	18464	957	-	0.343783
NA	BDU_8002		pl32	pseudo	1785	1030	-	0.38835
NA	BDU_8025		pl32	pseudo	24969	919	+	0.36235
NA	BDU_8022	hypothetical protein	pl32	CDS	21639	678	-	0.238938
NA	BDU_8015	putative lipoprotein	pl32	CDS	15865	531	+	0.278719
NA	BDU_8009		pl32	pseudo	9803	942	-	0.376858
NA	BDU_8007		pl32	pseudo	7256	1012	-	0.367589
NA	BDU_8027	uncharacterized_conserved protein	pl32	CDS	27665	900	+	0.267778
NA	BDU_8001	antigen P35-like protein	pl32	CDS	34	855	-	0.276023
NA	BDU_8003		pl32	pseudo	2799	508	-	0.372047
NA	BDU_8010		pl32	pseudo	11018	983	-	0.361139
NA	BDU_8026		pl32	pseudo	26199	568	+	0.295775
NA	BDU_8023		pl32	pseudo	22536	554	+	0.270758
NA	BDU_8028	hypothetical protein	pl32	CDS	29493	243	+	0.296296
NA	BDU_8013	uncharacterized conserved protein	pl32	CDS	14459	594	-	0.291246
NA	BDU_8014	hypothetical protein	pl32	CDS	15441	171	-	0.298246
NA	BDU_8016	putative lipoprotein	pl32	CDS	16613	888	-	0.27027
bdrR	BDU_8029	hypothetical protein	pl32	CDS	30017	639	+	0.309859
pf32	BDU_8020	PF32 plasmid partition protein	pl32	CDS	20325	753	-	0.272244
pf49	BDU_8019	PF49 plasmid partition protein	pl32	CDS	19703	600	-	0.231667
ppap1	BDU_8021	plasmid partitioning associated protein-1	pl32	CDS	21053	603	-	0.263682
vlp-a	BDU_8004	vlp protein, alpha subfamily	pl32	CDS	3562	1089	-	0.38292
vlp-b	BDU_8024	vlp protein, beta subfamily	pl32	CDS	23314	1287	+	0.347319
vlp-c	BDU_8006	vlp protein, gamma subfamily	pl32	CDS	6029	1032	-	0.383721
vlp-d_1	BDU_8005	vlp protein, delta subfamily	pl32	CDS	4837	975	-	0.373333
vlp-d_2	BDU_8008	vlp protein, delta subfamily	pl32	CDS	8451	1035	-	0.380676
vlp-d_3	BDU_8012	vlp protein, delta subfamily	pl32	CDS	13136	1023	-	0.375367
vsp	BDU_8011	vsp protein	pl32	CDS	12291	645	-	0.344186