SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: pl35

Number of genes found: 34

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia recurrentis A1, A1

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BRE_4013		pl35	pseudo	12753	788	-	0.261421
NA	BRE_4025	family 115-like protein	pl35	CDS	24060	540	+	0.283333
NA	BRE_4016	uncharacterized conserved protein	pl35	CDS	15721	705	+	0.241135
NA	BRE_4031		pl35	pseudo	28914	839	+	0.390942
NA	BRE_4020		pl35	pseudo	18811	1331	+	0.254696
NA	BRE_4034	antigenic protein P35	pl35	CDS	33400	1248	+	0.306891
NA	BRE_4029		pl35	pseudo	26869	923	+	0.35753
NA	BRE_4012		pl35	pseudo	12124	463	-	0.293736
NA	BRE_4002	BBK32-like protein	pl35	CDS	1496	498	-	0.313253
NA	BRE_4001		pl35	pseudo	819	706	-	0.296034
NA	BRE_4004		pl35	pseudo	4635	980	-	0.382653
NA	BRE_4028		pl35	pseudo	26624	207	+	0.246377
NA	BRE_4008	ORFk-like protein	pl35	CDS	8903	696	+	0.268678
NA	BRE_4015		pl35	pseudo	14515	1004	-	0.261952
NA	BRE_4009	MlpL-like protein; lipoprotein	pl35	CDS	9763	510	+	0.270588
NA	BRE_4032		pl35	pseudo	29749	1009	+	0.382557
NA	BRE_4024	MlpL-like protein	pl35	CDS	22583	432	-	0.243056
NA	BRE_4022		pl35	pseudo	20818	493	+	0.235294
NA	BRE_4006		pl35	pseudo	7036	1159	-	0.264884
NA	BRE_4014		pl35	pseudo	14115	364	+	0.258242
NA	BRE_4023		pl35	pseudo	21615	641	-	0.24649
NA	BRE_4011		pl35	pseudo	11656	423	-	0.248227
NA	BRE_4026		pl35	pseudo	24610	1349	+	0.266864
NA	BRE_4010		pl35	pseudo	10641	752	+	0.222074
NA	BRE_4007		pl35	pseudo	8208	540	-	0.287037
NA	BRE_4021		pl35	pseudo	20306	467	+	0.295503
bdr_1	BRE_4005	bdr proitein	pl35	CDS	6301	693	-	0.264069
bdr_2	BRE_4027	bdr proitein	pl35	CDS	26002	474	+	0.261603
pf32	BRE_4018	PF32 plasmid partition protein	pl35	CDS	16990	750	+	0.244
pf49	BRE_4019	PF49 plasmid partition protein	pl35	CDS	17796	576	+	0.234375
ppap1	BRE_4017	plasmid partitioning associated protein-1	pl35	CDS	16454	561	+	0.226381
vlp_1	BRE_4003	vlp protein	pl35	CDS	3385	1137	-	0.349164
vlp_2	BRE_4033	vlp protein	pl35	CDS	30872	1137	+	0.348285
vsp	BRE_4030	vsp protein	pl35	CDS	28035	705	+	0.351773