SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: pl37

Number of genes found: 30

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia recurrentis A1, A1

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BRE_3025		pl37	pseudo	29863	777	+	0.366795
NA	BRE_3007	BBK01-like protein	pl37	CDS	8318	957	+	0.3093
NA	BRE_3003	putative lipoprotein	pl37	CDS	2333	993	-	0.26284
NA	BRE_3030		pl37	pseudo	34742	1048	+	0.39313
NA	BRE_3001		pl37	pseudo	49	528	+	0.335227
NA	BRE_3006	hypothetical protein	pl37	CDS	7263	765	-	0.264052
NA	BRE_3028		pl37	pseudo	33081	186	+	0.365591
NA	BRE_3014		pl37	pseudo	17521	529	-	0.217391
NA	BRE_3008	uncharacterized conserved protein	pl37	CDS	9822	594	+	0.299663
NA	BRE_3022		pl37	pseudo	26269	931	+	0.392052
NA	BRE_3009	immunogenic protein P35	pl37	CDS	10546	1197	+	0.282373
NA	BRE_3004		pl37	pseudo	5149	820	-	0.25
NA	BRE_3029		pl37	pseudo	33643	735	+	0.370068
NA	BRE_3002	antigen P35-like protein	pl37	CDS	1073	852	+	0.282864
NA	BRE_3026		pl37	pseudo	30844	832	+	0.355769
NA	BRE_3027		pl37	pseudo	31828	1043	+	0.395014
NA	BRE_3010		pl37	pseudo	12484	387	-	0.374677
NA	BRE_3017	uncharacterized conserved protein	pl37	CDS	19508	684	-	0.222222
bdr	BRE_3013	bdr proitein	pl37	CDS	16063	591	+	0.247039
pf32	BRE_3015	PF32 plasmid partition protein	pl37	CDS	18123	762	-	0.232283
ppap1	BRE_3016	plasmid partitioning associated protein-1	pl37	CDS	18860	576	-	0.241319
thy1	BRE_3005	thymidylate synthase-complementing protein	pl37	CDS	6191	834	-	0.270983
vlp-a	BRE_3018	vlp protein, alpha subfamily	pl37	CDS	21328	975	+	0.386667
vlp-c	BRE_3012	vlp protein, gamma subfamily	pl37	CDS	14770	1026	-	0.373294
vlp-d_1	BRE_3011	vlp protein, delta subfamily	pl37	CDS	13171	993	-	0.374622
vlp-d_2	BRE_3020	vlp protein, delta subfamily	pl37	CDS	23823	1095	+	0.36895
vlp-d_3	BRE_3023	vlp protein, delta subfamily	pl37	CDS	27359	1113	+	0.386343
vsp_1	BRE_3019	vsp protein	pl37	CDS	22933	645	+	0.35969
vsp_2	BRE_3021	vsp protein	pl37	CDS	25266	582	+	0.378007
vsp_3	BRE_3024	vsp protein	pl37	CDS	28749	582	+	0.376289