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# Borrelia recurrentis A1, A1

>BRE_3006 hypothetical protein
MLICTLSVLMMLYCKNGRNNSEATDSILARDQSNKAETKPITPEEAYFEL
EIGVELLKDSLNFKPEVFDEYSFKDIFEIALGERNTEEFRHSVYYNLKYD
TQTLNNLKTIADILMSKSNSDVKNFVLLIESLSHLPSYEFEVIDEQGKIL
NNNTLTALASSKDLEGLNELADMLYNMILQREQRFLTIQEIIKDASKSDT
KEILLKKIEPLIKLDVMLNDKNCNNVKLCLDSKTLSDFPNKISDKVNNLM
QQMK
>BRE_3007 BBK01-like protein
MNNFIVKEENMKKNVLLSAFMLTLLFLLSCDLDVLNSLLIEAREKFLDEN
KNNKGLHLKDENQKDQEDVIIGFEGHKSMQQVVPGVGGQPVVSMKPVNSE
ISVLRWYPYNQEEKIEIKEEDLIPSTEDEKRAQAEIEKVKSVFKDFNFDQ
LIEEARKLKDEYVQLESSFYDTLLKLQSKIGSYRPLNRNSRIKKQELIRI
KKQELMQVYNQLNNERNDIDMLMIKVDSGFNDRSSARYFFEKSQKTLKEA
ITERLKNERRNRWAKKGNIDVIARRARSEAESSLNQLESASSKIGEVMER
KEEIEELIEGAKSVLGGF
>BRE_3008 uncharacterized conserved protein
MNFVYSRVVLIFCIICFASCGLLKTKNKSRLLQDLKNIDLKSDWKDNLKL
NNDELGILTFFIDALKDELPKTRASAAHFNIYLKGDLSKVEEYVKRFFLK
LHDKGKVKELLGYIKYGRDNSPNVEGRDEDLGMDAKEHYRIEVRLASVFD
KYFMFLNPPSSGPSAAPSAKVPFVGRDPENEVFNEIKRVCYEYRGSH
>BRE_3009 immunogenic protein P35
MKFKTRYLSLGLLFSFISCDLIFDDKIKEKSLILFDKVNAVLDTSGQSVE
NVRSPKQKRKIVKKRLSTSGKKSANSNLAQDVLSDDITSGLQYDVKRDNA
HMQKGLVLKDSLEKNDVFLNEKDLNVILSNTTSEFSKEDIQKQKYQDIES
KNSITEISTGYNLDSHSRVVNGVLTSLNGESGELKETIESNAIEVNFTID
SDLGPKHISGSNTIAYTDIVEEEDYDQYYWEDDEDSWEDKELLKEEVRLD
NRYKSYLESVRYNVDSAIDTIDKIYNNYILFSTKQTQMYSTRLNSVTKAK
AKEEAKYFIKEKLERDLKTLLNYIQVSAKTATNFVYIKEIHAKQKLDKLE
IEMKSLISKVQGQSNSYEAYKAIVSSILQMKDSLKIVQSSTDKNGPWY
>BRE_3002 antigen P35-like protein
MRKNFFTNIFILFLITLIMAGCRPLNKEGGYGGAGQRDGASKSQEIDLIP
QLIDAYSQLIQSEEDDEVNGDVQKNLQSDKEKTELIALIKEKVKTEIEVL
TKYSNKIEDNEQYGMKWGVFKFLIEDNNKRNIQSAENTLARKQLYASLEW
NEDRLRKFGTIMNEVEKCDRVVAKTILETGMNFVQGKFENAIISIDDKSQ
DLDNLILKELKDIKKNLDLIDSFRKQWISSVDSIISEYDSNTGDIQKDSQ
ALVNRVNTEYKEIFENKIDEIKKAVDDIQTILK
>BRE_3003 putative lipoprotein
MREVKINLYLFVIITISCKSGDYVDGQENKKIDLSSKKIVTPAKKVIIPP
PVVILSSALPVIKTEIPKPNPPVQNYNALDSKDKAYIRLKKSINQYKEQC
KINPNQTIKNTEEIETLIKSLSDYEKTEEYNYIYTSLENDDHIIDSLKKV
LEKLSSIYWYPPRYNNEANITYYEDDEEIPKATYKHYHEQMMVKSTTKIK
QPKTKKYTGLLLSLLNKLFDMTFFTNNLLYKCLHDKNLAHFKSAEEINKI
YDQLNDIMNKRKDVILKFKDQILLAEKHFDEVKMVDEIKKIVEPGKEVYS
AYKAMYEAADGIWELKYNLGFMPFDKNIII
>BRE_3017 uncharacterized conserved protein
MKNTSHEVKIHTQPLKKYHNRYYKILSILKYFQKNLLRYNQTIILNALNR
FLAKDELKIITLRTLRKDLALLCNKGIIKKTLLRLGEGNGSYIRYAVNKY
STNNLKRLLDDKQTIIEHDANEIYEFTKKTQQKYYLKNKRLNIHKHKNAT
KNVSHNITNNKEIKNKKNKKEKMKKIEKQTIDTNYMIKNVAKWKTMRYLD
KIEENANKKRYEDSMIKTKEWLKNLKN
>BRE_3013 bdr, bdr proitein
MAHPQPIITQQMVLKELIKAGINRDIAADLSYRYYKNELTYKDLEYLENN
FNSKIEKIESILKSEITSAKLEVNNKIDKVKVELDNKIDNKFNELDNQIN
KVEDRLKSEITSTKIELNNKIDKVEDKLKSEIISTKIELNNKIDKIKIEL
DNKIDNKFNEIKNTGKLHNWMFGTIITLNIGIFLTLFSIIYSLLNK
>BRE_3015 pf32, PF32 plasmid partition protein
MDKKEPEIISIANIKGGVGKSVLTIIFSYILKDMGKKILAIDFDPQNSLT
SYFFKYVKSLSKNNIYALLKERPNFNLDKYLTKIHEFIYLIPSHPNLHLF
NKENTSYKELFLKHRLKNVLPDYNFDYVIIDTPPNLDSLLDNALNITDKL
IIPIQVERFSVESLSILMKYIDKISMYVGKDIDISIVENQFMKNRNTFMN
IENSIKDKYGKYIKGKIHFSNKIKVFANDLKEPNFKEAYYQECLESLRNI
LGI
>BRE_3016 ppap1, plasmid partitioning associated protein-1
MNCSLRRLKTKMIEIRLKDNKNDVFNEIEKIDKRTLYHTKIFNDFFAFGI
SKKEENKFFISLRNLFNKGKRSRFHLFSIKENIDDKFLGMFYGFKRLRKP
IYFKYKNNNTKDIETVPMYKIYYIEFRFKRGSIFCYIRAIHSLTKKEKFN
KNYAQNLLKRIINLEYEVYEFYNETPIAGGIITKWIKRNQK
>BRE_3005 thy1, thymidylate synthase-complementing protein
MNFKIEKENLLNIEHKVLDKGFIKLVDFMGSDERIIQAARISYRGESIKR
EDRELIDYLIRNEHTSPLEQVVFTFYIKAPIFVARQWMRHRTARINEVSS
SYSLIREEFYVPLEENMNTQNVTDNQDNKKTECEFREEILNNLKENQKSS
YKLYQNMINHNISKEISRIVLPLSLYTEWYWQIDLNNLFHFIKLRSALNA
SKEVAEHSSKEMREYAKVLLEIIEKIVPIATKSFKNHILKGCKLSYEEIV
AIADALDISKLKLDANALKRLQDKLNI
>BRE_3018 vlp-a, vlp protein, alpha subfamily
MLVMWMMGCNSGGVKGGEGAGGGGDGRGLSGAMMELGRSAERVFYAFIEL
MSDTLGLKVTKDTTKQQVGDYFNSLGGKLGETSEELEKVVNKATSGVDKS
DESKNAKNPVKIAVDSAKGVLALLKTHLESLKNIGDDNKVVEVANNQNGV
AANSDALKIMCKALKGIVEIATKQGVKDPSASSVTLAQASIGVDAKDGAK
VLAAGANAGAAVGDKAAIIVSVVRGEEILASIVKSGESDAAVGANATADT
SAISFAKGGTADHVSHEASAKAAAVAGGIALRALVKEGKLASHNDNNDHK
AVQSVGISAVSKLLVSVEDIMKRQ
>BRE_3012 vlp-c, vlp protein, gamma subfamily
MIMMVMMGCNSGVLEAEQGKNKFLQSLVNVSNEFLNVFTSFWEMVGSVLG
LNVNSKKSDVGKYFRTVQETVQGIKDGLNKIVNEMKEEKNPNAEATESAV
KTLVESKLDKIIGGAKEASEAIGDASDPIGNVSDQNAGAVGIEVDKLVKG
LKSIVDIVLKEGKNDAGDDKKASDGSTSRTGGNAGDGEAGKLFASANAGT
AENAKKSAADAAKAVGAVTCADILQSMIEDNGEVVKLASSNAAVAAVNAN
KKDGVIAGGIALRAMAKDGKFAGSSDAASVDAKKTVKGAAVSALIKALDT
LTVAIRKTVDLGLKNVKEAMKINANATSVLPDKDVSDAKNQ
>BRE_3011 vlp-d_1, vlp protein, delta subfamily
MMMMVVMGCNSGGVKDPEKVFLSEMVNLGKGFLEVFVSFGDMITGTLGIK
AETKKSEIGGYFSKIAETMKEVREKLEKILEENGKYEKVREKVGEFIGKI
SKIEEGAKEASKGANGDIIGNAKKGEDAVAASKDSVVSLVKGIKAIVEIV
LGEKEGNAGNNIITEDKKDIGKLFGKKDGDRAQEAEAAKVSTSIGAVSGA
DILKAIAKSKENPVTDSANGIEKATDAAEIAVVPSVDDKKEIKEDTAKKD
AIIAAGIALRGMAKEGKFAAKKDEDKSAHAVNGAVSSAVNKVLSTLVIAI
RNTVDKGLKEINEVLGEIKQGEGVEAKVSK
>BRE_3020 vlp-d_2, vlp protein, delta subfamily
MKEKKGKGNIEESISEYREKGREKRSKRGLKGIMVLVMVMMGCNSGGVSG
GVKDPEKVFLSEMVNLGKGFLDVFVSFGDMITGTLGIKADTKKSDIGKYF
TDIEKTMISVKEKLQTEVAKNGNYVKIKEVVDQFITGTLDKIAEGAKKAS
SGAAGGAVLGSSVKNEDAAPGEVASVNALIEGIKTIVAVVLKNEGNADAN
KTTDDDKKDIGKLFSKASDNGSEAEAAKANASIGAVSGVDILQAIAKSDV
VSAAGKDIDQAKDVAEIATAKNDSGTKETKQKDAVISGGIALRSMAKGGK
FATKNEDKAVPAINGVAASAVGKTLSALIIAIRNTVDSELKKINEVLATV
KQEDKSSEATASVQ
>BRE_3023 vlp-d_3, vlp protein, delta subfamily
MKKMKEEGIKGIRGIRGIKGKEELGKKEGRRNNRIVLGMMMVMMGCNSGG
VSGGVRDPEKVFLSEMVNLGKGFLDVFVSFGDMITGTLGIKADTKKSEIG
GYFTKIAETMKGVREKLGKILEENGKYEKVKEKVEEFIGEIGKIEAGAQE
AAKGATGEAIGNAASAGHGATPANRESVVSLVKGIKIIVDVVLKGKGNAE
ATKTGDDKKDIGNLFADDNGKGDAKEENIAKASASIGAVIGADILQAIAK
SKEDPKDYATDGIEKATDAAEIAIAKAVNAKKEIKEESAKKDAVIAAGIA
LRGMAKDGKFAANQSAKDANAVNGAVASAVNKVLSTLTIAIRNTVDLGLK
EINKVLGEIKEGEGFEVKTN
>BRE_3019 vsp_1, vsp protein
MGRIVKGIIMGMMVVVMGCNSGGVSGEGTGGDGKVRKGDGSVIDLKVVGE
KIKSAVEFAGKVKEVHVLVKSVDELAKAIGKKIKDSDQELDALDGKNGSL
MAGVFQIILTVKGGLTKLETDSSSVTEKIKTKITDAKTKSVNFLKKLQEK
NTDLGKEDVSNADAEKAIDYVKQKDGDKGAKELGELNKAVDELLVSSNKI
VSDAIAELVVKPIT
>BRE_3021 vsp_2, vsp protein
MGEVSGGEEGQAKKGDGSVIDLKVVGEKIKSAVEFVEKVKEVHTLVKSVD
ELAKAIGKKVGAAGLGDIADHNGSLIAGAYSVIEAVDAKLATLAGKVGLS
SDLSTKVNDAKVKSTAFLNKLKSSTAEFDKEGASDADSKKALLKDNADKT
KGRDELDKLNTSIDILMASSKKELDDSIKNLIEEPVRPDTVGN
>BRE_3024 vsp_3, vsp protein
MGCNSGGVGEGSQAKATKADGSVIDLKVVSKKIKDAVEFAEKVKEVHVLV
KSVDELAKAIGKKIDANGSLAAEAGQNGSLIAGVHSVISAVNTKLKGLET
TDNISDELKGKIVAVETEGKAFLDKLKSGNAELGKKDASDDDTKKAIDRI
GKKDGDKGVAELIKLNTAIDALLKLSTDAVEASIGELTVKPAV