SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

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+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

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+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: ZS7_lp25

Number of genes found: 24

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia burgdorferi ZS7, ZS7

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BbuZS7_E16		ZS7_lp25	pseudo	16951	258	+	0.271318
NA	BbuZS7_E19		ZS7_lp25	pseudo	19972	216	+	0.259259
NA	BbuZS7_E05	putative lipoprotein	ZS7_lp25	CDS	6579	147	-	0.231293
NA	BbuZS7_E08	conserved hypothetical protein	ZS7_lp25	CDS	8336	123	-	0.243902
NA	BbuZS7_E02	conserved hypothetical protein	ZS7_lp25	CDS	4444	138	-	0.26087
NA	BbuZS7_E20		ZS7_lp25	pseudo	20675	249	+	0.220884
NA	BbuZS7_E22	conserved hypothetical protein	ZS7_lp25	CDS	21984	732	-	0.254098
NA	BbuZS7_E23		ZS7_lp25	pseudo	23546	216	-	0.236111
NA	BbuZS7_E13	borrelia family protein	ZS7_lp25	CDS	12854	564	-	0.214539
NA	BbuZS7_E03	conserved hypothetical protein	ZS7_lp25	CDS	4744	141	+	0.297872
NA	BbuZS7_E21		ZS7_lp25	pseudo	21620	123	+	0.186992
NA	BbuZS7_E04		ZS7_lp25	pseudo	5402	153	+	0.254902
NA	BbuZS7_E18	conserved hypothetical protein	ZS7_lp25	CDS	19374	132	-	0.272727
NA	BbuZS7_E10	conserved hypothetical protein	ZS7_lp25	CDS	10224	510	-	0.27451
NA	BbuZS7_E07	hypothetical protein	ZS7_lp25	CDS	8207	126	-	0.214286
NA	BbuZS7_E11	putative plasmid partition protein	ZS7_lp25	CDS	11522	582	-	0.243986
NA	BbuZS7_E12	CobQ/CobB/MinD/ParA nucleotide binding domain protein	ZS7_lp25	CDS	12120	759	-	0.270092
NA	BbuZS7_E17	hypothetical protein	ZS7_lp25	CDS	18626	114	-	0.333333
NA	BbuZS7_E01	putative type I restriction/modofication enzyme	ZS7_lp25	CDS	348	3834	-	0.243088
NA	BbuZS7_E24		ZS7_lp25	pseudo	23866	342	-	0.225146
NA	BbuZS7_E06	putative lipoprotein	ZS7_lp25	CDS	6922	864	+	0.247685
NA	BbuZS7_E14	conserved hypothetical protein	ZS7_lp25	CDS	13427	1086	-	0.226519
bptA	BbuZS7_E09	BptA protein	ZS7_lp25	CDS	9591	621	-	0.241546
pncA	BbuZS7_E15	pyrazinamidase/nicotinamidase, PncA protein	ZS7_lp25	CDS	15078	537	-	0.303538