SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

Genomic element: pl23

Number of genes found: 21

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia recurrentis A1, A1

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BRE_6004	guanine-hypoxanthine permease	pl23	CDS	5082	1356	-	0.306047
NA	BRE_6002		pl23	pseudo	2539	1452	-	0.327135
NA	BRE_6008	putative lipoprotein	pl23	CDS	8318	567	-	0.241623
NA	BRE_6019	uncharacterized conserved protein	pl23	CDS	19198	540	-	0.244444
NA	BRE_6007		pl23	pseudo	7614	682	+	0.239003
NA	BRE_6006	putative lipoprotein	pl23	CDS	7056	513	-	0.243665
NA	BRE_6005	putative lipoprotein	pl23	CDS	6559	459	-	0.235294
NA	BRE_6001		pl23	pseudo	1298	963	-	0.258567
NA	BRE_6014	uncharacterized conserved protein	pl23	CDS	15020	642	-	0.222741
NA	BRE_6021	family 88-like protein	pl23	CDS	22154	429	-	0.223776
NA	BRE_6015	uncharacterized conserved protein	pl23	CDS	15925	939	+	0.252396
NA	BRE_6012	uncharacterized conserved protein	pl23	CDS	13027	492	-	0.221545
NA	BRE_6009	uncharacterized conserved protein	pl23	CDS	8981	1257	+	0.211615
acyP	BRE_6011	acylphosphatase	pl23	CDS	12768	285	+	0.259649
guaA	BRE_6003		pl23	pseudo	4023	564	-	0.320922
malX	BRE_6010	PTS system, maltose and glucose-specific IIABC component	pl23	CDS	11054	1632	+	0.331495
pf32	BRE_6017	PF32 plasmid partition protein	pl23	CDS	17422	765	+	0.25098
pf49	BRE_6018	PF49 plasmid partition protein	pl23	CDS	18242	555	+	0.248649
ppap1	BRE_6016	plasmid partitioning associated protein-1	pl23	CDS	16886	561	+	0.28164
resT	BRE_6013	telomere resolvase	pl23	CDS	13574	1359	-	0.260486
vlp-b	BRE_6020	vlp protein, beta subfamily	pl23	CDS	20295	1092	+	0.380952