SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Coenzyme transport and metabolism
Organism: Borrelia afzelii, PKo

Number of genes found: 12

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia afzelii, PKo

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	BAPKO_0547	NH(3)-dependent NAD+ synthetase	PKO-g-P-chrIn1v1.w1	CDS	535764	1539	+	0.291098
NA	BAPKO_0576	hypothetical protein	PKO-g-P-chrIn1v1.w1	CDS	561193	618	-	0.220065
NA	BAPKO_0832	hypothetical protein	PKO-g-P-chrIn1v1.w1	CDS	824127	582	+	0.276632
NA	BAPKO_0700	HemN-related protein	PKO-g-P-chrIn1v1.w1	CDS	699432	1134	+	0.259259
NA	BAPKO_0678	hypothetical protein	PKO-g-P-chrIn1v1.w1	CDS	675527	1446	-	0.275934
dfp	BAPKO_0865	pantothenate metabolism flavoprotein	PKO-g-P-chrIn1v1.w1	CDS	862415	1062	-	0.272128
folD	BAPKO_0025	methylenetetrahydrofolate dehydrogenase	PKO-g-P-chrIn1v1.w1	CDS	24505	906	-	0.315673
ispB	BAPKO_0324	octaprenyl-diphosphate synthase	PKO-g-P-chrIn1v1.w1	CDS	319228	1044	+	0.240421
kdtB	BAPKO_0745	lipopolysaccharide biosynthesis-related protein	PKO-g-P-chrIn1v1.w1	CDS	743485	492	+	0.276423
metK	BAPKO_0385	S-adenosylmethionine synthetase	PKO-g-P-chrIn1v1.w1	CDS	384995	1179	+	0.3257
panF	BAPKO_0867	pantothenate permease	PKO-g-P-chrIn1v1.w1	CDS	863916	1335	+	0.252434
pdxK	BAPKO_0816	pyridoxal kinase	PKO-g-P-chrIn1v1.w1	CDS	813208	795	-	0.272956