SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

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+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

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+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

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+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Coenzyme transport and metabolism
Organism: Borrelia garinii High passage (300), PBi

Number of genes found: 13

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia garinii High passage (300), PBi

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	NC_006156.1_783	hypothetical protein	NC_006156.1	CDS	822479	594	+	0.279461
NA	PBI300d04e03.r1_4	hypothetical protein	PBI300d04e03.r1	CDS	1229	1350	-	0.237037
NA	NC_006156.1_659	HemN-related protein	NC_006156.1	CDS	697550	1134	+	0.253086
NA	NC_006156.1_638	hypothetical protein	NC_006156.1	CDS	673694	1446	-	0.280083
NA	NC_006156.1_523	NH(3)-dependent NAD+ synthetase	NC_006156.1	CDS	534361	1539	+	0.298895
NA	NC_006156.1_547	hypothetical protein	NC_006156.1	CDS	559382	618	-	0.228155
dfp	NC_006156.1_815	pantothenate metabolism flavoprotein	NC_006156.1	CDS	860823	1062	-	0.275895
folD	NC_006156.1_26	methylenetetrahydrofolate dehydrogenase	NC_006156.1	CDS	24554	906	-	0.306843
ispB	NC_006156.1_313	octaprenyl-diphosphate synthase	NC_006156.1	CDS	319128	1044	+	0.254789
kdtB	NC_006156.1_705	lipopolysaccharide biosynthesis-related protein	NC_006156.1	CDS	741575	492	+	0.278455
metK	NC_006156.1_371	S-adenosylmethionine synthetase	NC_006156.1	CDS	384918	1179	+	0.318066
panF	NC_006156.1_817	pantothenate permease	NC_006156.1	CDS	862322	1335	+	0.250187
pdxK	NC_006156.1_768	pyridoxal kinase	NC_006156.1	CDS	811576	795	-	0.279245