SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

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+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

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+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Lipid transport and metabolism
Organism: Borrelia garinii High passage (300), PBi

Number of genes found: 17

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia garinii High passage (300), PBi

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	NC_006156.1_707	acyl carrier protein	NC_006156.1	CDS	742335	243	+	0.288066
NA	NC_006156.1_120	undecaprenyl diphosphate synthase	NC_006156.1	CDS	117506	693	-	0.307359
NA	NC_006156.1_691	phosphomevalonate kinase, putative	NC_006156.1	CDS	730580	954	+	0.314465
NA	NC_006156.1_692	mevalonate kinase, putative	NC_006156.1	CDS	731527	894	+	0.288591
NA	NC_006156.1_690	mevalonate pyrophosphate decarboxylase	NC_006156.1	CDS	729651	939	+	0.292865
NA	NC_006156.1_687	3-hydroxy-3-methylglutaryl-CoA synthase	NC_006156.1	CDS	726138	1224	+	0.30719
NA	NC_006156.1_119	phosphatidate cytidylyltransferase	NC_006156.1	CDS	116659	858	-	0.285548
NA	NC_006156.1_723	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NC_006156.1	CDS	761484	630	+	0.220635
NA	NC_006156.1_532	hypothetical protein	NC_006156.1	CDS	542953	1296	-	0.237654
NA	NC_006156.1_10	holo-acyl-carrier protein synthase, putative	NC_006156.1	CDS	10053	375	+	0.242667
NA	NC_006156.1_138	long-chain-fatty-acid CoA ligase	NC_006156.1	CDS	135685	1893	-	0.298996
NA	NC_006156.1_594	long-chain-fatty-acid CoA ligase	NC_006156.1	CDS	613983	1938	+	0.309082
NA	NC_006156.1_248	phosphatidyltransferase	NC_006156.1	CDS	253740	705	+	0.268085
NA	NC_006156.1_414	conserved hypothetical integral membrane protein	NC_006156.1	CDS	424447	621	-	0.235105
fadA	NC_006156.1_109	acetyl-CoA C-acetyltransferase	NC_006156.1	CDS	106793	1194	-	0.341709
mvaA	NC_006156.1_689	3-hydroxy-3-methylglutaryl-CoA reductase	NC_006156.1	CDS	728399	1275	+	0.290196
plsC	NC_006156.1_37	1-acyl-sn-glycerol-3-phosphate acyltransferase	NC_006156.1	CDS	35701	738	-	0.287263