Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Borrelia afzelii, PKo
Number of genes found: 113
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Borrelia afzelii, PKo | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BAPKO_0741 | hypothetical protein | PKO-g-P-chrIn1v1.w1 | CDS | 741010 | 501 | + | 0.289421 |
NA | BAPKO_0868 | hypothetical protein | PKO-g-P-chrIn1v1.w1 | CDS | 865263 | 948 | + | 0.2827 |
NA | BAPKO_0703 | lysyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 702199 | 1566 | - | 0.306513 |
NA | BAPKO_0017 | conserved hypothetical protein | PKO-g-P-chrIn1v1.w1 | CDS | 16587 | 981 | - | 0.265036 |
NA | BAPKO_0199 | HemK family methylase, putative | PKO-g-P-chrIn1v1.w1 | CDS | 194327 | 822 | + | 0.26764 |
NA | BAPKO_0131 | conserved hypothetical protein | PKO-g-P-chrIn1v1.w1 | CDS | 124449 | 750 | - | 0.289333 |
NA | BAPKO_0778 | hypothetical protein | PKO-g-P-chrIn1v1.w1 | CDS | 779420 | 1005 | - | 0.284577 |
NA | BAPKO_0020 | S-adenosylmethionine: tRNA ribosyltransferase- isomerase | PKO-g-P-chrIn1v1.w1 | CDS | 19841 | 1041 | - | 0.292988 |
NA | BAPKO_0726 | hypothetical protein | PKO-g-P-chrIn1v1.w1 | CDS | 726864 | 1068 | - | 0.287453 |
alaS | BAPKO_0228 | alanyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 223916 | 1785 | - | 0.327171 |
argS | BAPKO_0625 | arginyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 617744 | 1758 | - | 0.282708 |
asnS | BAPKO_0102 | asparaginyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 98540 | 1389 | + | 0.306695 |
aspS | BAPKO_0468 | aspartyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 469419 | 1761 | - | 0.277115 |
ctc | BAPKO_0838 | general stress protein | PKO-g-P-chrIn1v1.w1 | CDS | 826768 | 549 | + | 0.338798 |
cysS | BAPKO_0631 | cysteinyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 625758 | 1443 | + | 0.289674 |
def | BAPKO_0065 | polypeptide deformylase | PKO-g-P-chrIn1v1.w1 | CDS | 59765 | 498 | - | 0.299197 |
efp | BAPKO_0222 | translation elongation factor P | PKO-g-P-chrIn1v1.w1 | CDS | 218146 | 579 | - | 0.309154 |
fmt | BAPKO_0064 | methionyl-tRNA formyltransferase | PKO-g-P-chrIn1v1.w1 | CDS | 58821 | 948 | - | 0.306962 |
frr | BAPKO_0122 | ribosome releasing factor | PKO-g-P-chrIn1v1.w1 | CDS | 118023 | 555 | - | 0.295496 |
ftsJ | BAPKO_0323 | cell division protein | PKO-g-P-chrIn1v1.w1 | CDS | 318599 | 570 | - | 0.291228 |
fus-1 | BAPKO_0568 | translation elongation factor G | PKO-g-P-chrIn1v1.w1 | CDS | 553561 | 2082 | - | 0.352546 |
fus-2 | BAPKO_0736 | translation elongation factor G | PKO-g-P-chrIn1v1.w1 | CDS | 735591 | 2010 | + | 0.29801 |
gatA | BAPKO_0351 | Glu-tRNA(Gln) amidotransferase, subunit A | PKO-g-P-chrIn1v1.w1 | CDS | 348406 | 1446 | - | 0.303596 |
gatB | BAPKO_0350 | Glu-tRNA(Gln) amidotransferase, subunit B | PKO-g-P-chrIn1v1.w1 | CDS | 346959 | 1458 | - | 0.316187 |
gatC | BAPKO_0352 | Glu-tRNA(Gln) amidotransferase, subunit C | PKO-g-P-chrIn1v1.w1 | CDS | 349862 | 276 | - | 0.246377 |
gltX | BAPKO_0381 | glutamyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 380745 | 1473 | - | 0.306178 |
glyS | BAPKO_0380 | glycyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 379390 | 1338 | - | 0.323617 |
hisS | BAPKO_0137 | histidyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 132115 | 1371 | - | 0.281546 |
hisT | BAPKO_0011 | pseudouridylate synthase I | PKO-g-P-chrIn1v1.w1 | CDS | 11178 | 741 | + | 0.268556 |
ileS | BAPKO_0886 | isoleucyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 884615 | 3129 | - | 0.293384 |
infA | BAPKO_0171 | translation initiation factor 1 | PKO-g-P-chrIn1v1.w1 | CDS | 170725 | 222 | + | 0.310811 |
infB | BAPKO_0854 | translation initiation factor 2 | PKO-g-P-chrIn1v1.w1 | CDS | 848230 | 2349 | + | 0.339293 |
infC | BAPKO_0193 | translation initiation factor 3 | PKO-g-P-chrIn1v1.w1 | CDS | 188763 | 561 | - | 0.322638 |
ksgA | BAPKO_0621 | dimethyladenosine transferase | PKO-g-P-chrIn1v1.w1 | CDS | 612788 | 846 | - | 0.241135 |
leuS | BAPKO_0261 | leucyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 255376 | 2523 | + | 0.307967 |
map | BAPKO_0106 | methionine aminopeptidase | PKO-g-P-chrIn1v1.w1 | CDS | 102684 | 756 | - | 0.328042 |
metG | BAPKO_0618 | methionyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 608549 | 2175 | - | 0.288276 |
miaA | BAPKO_0874 | 2-methylthio-N6-isopentyladenosine tRNA modification enzyme | PKO-g-P-chrIn1v1.w1 | CDS | 870159 | 903 | + | 0.280177 |
papS | BAPKO_0749 | polynucleotide adenylyltransferase | PKO-g-P-chrIn1v1.w1 | CDS | 745195 | 1233 | - | 0.222222 |
pheS | BAPKO_0540 | phenylalanyl-tRNA synthetase, alpha subunit | PKO-g-P-chrIn1v1.w1 | CDS | 526733 | 1563 | + | 0.305182 |
pheT | BAPKO_0541 | phenylalanyl-tRNA synthetase, beta subunit | PKO-g-P-chrIn1v1.w1 | CDS | 528283 | 1704 | + | 0.288146 |
pnpA | BAPKO_0858 | polyribonucleotide nucleotidyltransferase | PKO-g-P-chrIn1v1.w1 | CDS | 852271 | 2169 | + | 0.346243 |
prfA | BAPKO_0198 | peptide chain release factor 1 | PKO-g-P-chrIn1v1.w1 | CDS | 193251 | 1074 | + | 0.281192 |
prfB | BAPKO_0075 | peptide chain release factor 2 | PKO-g-P-chrIn1v1.w1 | CDS | 70134 | 810 | + | 0.325926 |
proS | BAPKO_0419 | prolyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 416528 | 1467 | - | 0.325153 |
pth | BAPKO_0839 | peptidyl-tRNA hydrolase | PKO-g-P-chrIn1v1.w1 | CDS | 827321 | 567 | + | 0.29806 |
rbfA | BAPKO_0855 | ribosome-binding factor A | PKO-g-P-chrIn1v1.w1 | CDS | 850601 | 363 | + | 0.280992 |
rnpA | BAPKO_0463 | ribonuclease P protein component | PKO-g-P-chrIn1v1.w1 | CDS | 463938 | 336 | + | 0.261905 |
rplA | BAPKO_0407 | ribosomal protein L1 | PKO-g-P-chrIn1v1.w1 | CDS | 408385 | 681 | - | 0.312775 |
rplB | BAPKO_0509 | ribosomal protein L2 | PKO-g-P-chrIn1v1.w1 | CDS | 501963 | 834 | + | 0.365707 |
rplC | BAPKO_0506 | ribosomal protein L3 | PKO-g-P-chrIn1v1.w1 | CDS | 500365 | 621 | + | 0.351047 |
rplD | BAPKO_0507 | ribosomal protein L4 | PKO-g-P-chrIn1v1.w1 | CDS | 500995 | 630 | + | 0.319048 |
rplE | BAPKO_0518 | ribosomal protein L5 | PKO-g-P-chrIn1v1.w1 | CDS | 505936 | 549 | + | 0.31694 |
rplF | BAPKO_0521 | ribosomal protein L6 | PKO-g-P-chrIn1v1.w1 | CDS | 507112 | 543 | + | 0.316759 |
rplI | BAPKO_0113 | ribosomal protein L9 | PKO-g-P-chrIn1v1.w1 | CDS | 110699 | 522 | - | 0.275862 |
rplJ | BAPKO_0406 | ribosomal protein L10 | PKO-g-P-chrIn1v1.w1 | CDS | 407892 | 489 | - | 0.304703 |
rplK | BAPKO_0408 | ribosomal protein L11 | PKO-g-P-chrIn1v1.w1 | CDS | 409065 | 432 | - | 0.358796 |
rplL | BAPKO_0405 | ribosomal protein L7/L12 | PKO-g-P-chrIn1v1.w1 | CDS | 407447 | 375 | - | 0.378667 |
rplM | BAPKO_0348 | ribosomal protein L13 | PKO-g-P-chrIn1v1.w1 | CDS | 345646 | 459 | - | 0.348584 |
rplN | BAPKO_0516 | ribosomal protein L14 | PKO-g-P-chrIn1v1.w1 | CDS | 505242 | 369 | + | 0.360434 |
rplO | BAPKO_0525 | ribosomal protein L15 | PKO-g-P-chrIn1v1.w1 | CDS | 508849 | 438 | + | 0.3379 |
rplP | BAPKO_0513 | ribosomal protein L16 | PKO-g-P-chrIn1v1.w1 | CDS | 504338 | 417 | + | 0.381295 |
rplQ | BAPKO_0531 | ribosomal protein L17 | PKO-g-P-chrIn1v1.w1 | CDS | 512616 | 372 | + | 0.284946 |
rplR | BAPKO_0522 | ribosomal protein L18 | PKO-g-P-chrIn1v1.w1 | CDS | 507672 | 360 | + | 0.288889 |
rplS | BAPKO_0743 | ribosomal protein L19 | PKO-g-P-chrIn1v1.w1 | CDS | 742204 | 360 | + | 0.288889 |
rplT | BAPKO_0191 | ribosomal protein L20 | PKO-g-P-chrIn1v1.w1 | CDS | 188172 | 348 | - | 0.318966 |
rplU | BAPKO_0827 | ribosomal protein L21 | PKO-g-P-chrIn1v1.w1 | CDS | 822134 | 312 | + | 0.278846 |
rplV | BAPKO_0511 | ribosomal protein L22 | PKO-g-P-chrIn1v1.w1 | CDS | 503092 | 363 | + | 0.341598 |
rplW | BAPKO_0508 | ribosomal protein L23 | PKO-g-P-chrIn1v1.w1 | CDS | 501645 | 297 | + | 0.289562 |
rplX | BAPKO_0517 | ribosomal protein L24 | PKO-g-P-chrIn1v1.w1 | CDS | 505625 | 306 | + | 0.284314 |
rpmA | BAPKO_0829 | ribosomal protein L27 | PKO-g-P-chrIn1v1.w1 | CDS | 822771 | 246 | + | 0.353659 |
rpmB | BAPKO_0359 | ribosomal protein L28 | PKO-g-P-chrIn1v1.w1 | CDS | 358022 | 279 | - | 0.297491 |
rpmC | BAPKO_0514 | ribosomal protein L29 | PKO-g-P-chrIn1v1.w1 | CDS | 504757 | 201 | + | 0.258706 |
rpmE | BAPKO_0238 | ribosomal protein L31 | PKO-g-P-chrIn1v1.w1 | CDS | 234198 | 246 | - | 0.300813 |
rpmF | BAPKO_0746 | ribosomal protein L32 | PKO-g-P-chrIn1v1.w1 | CDS | 744039 | 183 | + | 0.322404 |
rpmG | BAPKO_0412 | ribosomal protein L33 | PKO-g-P-chrIn1v1.w1 | CDS | 410406 | 180 | - | 0.311111 |
rpmH | BAPKO_0462 | ribosomal protein L34 | PKO-g-P-chrIn1v1.w1 | CDS | 463802 | 156 | + | 0.307692 |
rpmI | BAPKO_0192 | ribosomal protein L35 | PKO-g-P-chrIn1v1.w1 | CDS | 188540 | 201 | - | 0.248756 |
rpmJ | BAPKO_0527 | ribosomal protein L36 | PKO-g-P-chrIn1v1.w1 | CDS | 510616 | 114 | + | 0.254386 |
rpsA | BAPKO_0129 | ribosomal protein S1 | PKO-g-P-chrIn1v1.w1 | CDS | 122142 | 1656 | - | 0.306763 |
rpsB | BAPKO_0124 | ribosomal protein S2 | PKO-g-P-chrIn1v1.w1 | CDS | 119451 | 774 | - | 0.31137 |
rpsC | BAPKO_0512 | ribosomal protein S3 | PKO-g-P-chrIn1v1.w1 | CDS | 503458 | 876 | + | 0.311644 |
rpsD | BAPKO_0652 | ribosomal protein S4 | PKO-g-P-chrIn1v1.w1 | CDS | 646261 | 627 | - | 0.326954 |
rpsE | BAPKO_0523 | ribosomal protein S5 | PKO-g-P-chrIn1v1.w1 | CDS | 508044 | 498 | + | 0.36747 |
rpsF | BAPKO_0116 | ribosomal protein S6 | PKO-g-P-chrIn1v1.w1 | CDS | 112003 | 420 | - | 0.278571 |
rpsG | BAPKO_0401 | ribosomal protein S7 | PKO-g-P-chrIn1v1.w1 | CDS | 398808 | 474 | - | 0.324895 |
rpsH | BAPKO_0520 | ribosomal protein S8 | PKO-g-P-chrIn1v1.w1 | CDS | 506697 | 399 | + | 0.280702 |
rpsI | BAPKO_0347 | ribosomal protein S9 | PKO-g-P-chrIn1v1.w1 | CDS | 345234 | 411 | - | 0.318735 |
rpsJ | BAPKO_0505 | ribosomal protein S10 | PKO-g-P-chrIn1v1.w1 | CDS | 500018 | 312 | + | 0.330128 |
rpsK | BAPKO_0529 | ribosomal protein S11 | PKO-g-P-chrIn1v1.w1 | CDS | 511152 | 393 | + | 0.348601 |
rpsL | BAPKO_0402 | ribosomal protein S12 | PKO-g-P-chrIn1v1.w1 | CDS | 399306 | 375 | - | 0.370667 |
rpsM | BAPKO_0528 | ribosomal protein S13 | PKO-g-P-chrIn1v1.w1 | CDS | 510747 | 378 | + | 0.335979 |
rpsN | BAPKO_0519 | ribosomal protein S14 | PKO-g-P-chrIn1v1.w1 | CDS | 506502 | 186 | + | 0.327957 |
rpsO | BAPKO_0857 | ribosomal protein S15 | PKO-g-P-chrIn1v1.w1 | CDS | 851990 | 267 | + | 0.318352 |
rpsP | BAPKO_0739 | ribosomal protein S16 | PKO-g-P-chrIn1v1.w1 | CDS | 740497 | 261 | + | 0.318008 |
rpsQ | BAPKO_0515 | ribosomal protein S17 | PKO-g-P-chrIn1v1.w1 | CDS | 504960 | 255 | + | 0.286275 |
rpsR | BAPKO_0114 | ribosomal protein S18 | PKO-g-P-chrIn1v1.w1 | CDS | 111237 | 291 | - | 0.285223 |
rpsS | BAPKO_0510 | ribosomal protein S19 | PKO-g-P-chrIn1v1.w1 | CDS | 502806 | 279 | + | 0.333333 |
rpsT | BAPKO_0242 | ribosomal protein S20 | PKO-g-P-chrIn1v1.w1 | CDS | 236878 | 258 | - | 0.290698 |
rpsU | BAPKO_0266 | ribosomal protein S21 | PKO-g-P-chrIn1v1.w1 | CDS | 265970 | 210 | + | 0.290476 |
serS | BAPKO_0234 | seryl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 229109 | 1278 | - | 0.312207 |
spoU | BAPKO_0052 | spoU protein | PKO-g-P-chrIn1v1.w1 | CDS | 48370 | 669 | - | 0.276532 |
tgt | BAPKO_0862 | tRNA-guanine transglycosylase | PKO-g-P-chrIn1v1.w1 | CDS | 858347 | 1128 | + | 0.316489 |
thrZ | BAPKO_0764 | threonyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 761645 | 1746 | + | 0.315578 |
tlyA | BAPKO_0534 | hemolysin | PKO-g-P-chrIn1v1.w1 | CDS | 515352 | 792 | + | 0.255051 |
trmD | BAPKO_0742 | tRNA guanine-N1 methyltransferase | PKO-g-P-chrIn1v1.w1 | CDS | 741507 | 720 | + | 0.305556 |
trsA | BAPKO_0004 | tryptophanyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 5023 | 1047 | - | 0.312321 |
truB | BAPKO_0856 | tRNA pseudouridine 55 synthase | PKO-g-P-chrIn1v1.w1 | CDS | 850966 | 849 | + | 0.273263 |
tsf | BAPKO_0123 | translation elongation factor TS | PKO-g-P-chrIn1v1.w1 | CDS | 118615 | 840 | - | 0.302381 |
tuf | BAPKO_0504 | translation elongation factor TU | PKO-g-P-chrIn1v1.w1 | CDS | 498782 | 1185 | + | 0.363713 |
tyrS | BAPKO_0379 | tyrosyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 378176 | 1218 | - | 0.293924 |
valS | BAPKO_0781 | valyl-tRNA synthetase | PKO-g-P-chrIn1v1.w1 | CDS | 782506 | 2628 | + | 0.295662 |
yacO | BAPKO_0543 | rRNA methylase | PKO-g-P-chrIn1v1.w1 | CDS | 531056 | 741 | - | 0.265857 |