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2024-05-10 02:51:47

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Borrelia garinii High passage (300), PBi

Number of genes found: 116

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Borrelia garinii High passage (300), PBi
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA NC_006156.1_780 hypothetical proteinNC_006156.1 CDS820794 321 + 0.264798
NA NC_006156.1_700 hypothetical proteinNC_006156.1 CDS739124 501 + 0.293413
NA NC_006156.1_18 hypothetical proteinNC_006156.1 CDS16652 984 - 0.26626
NA NC_006156.1_662 lysyl-tRNA synthetaseNC_006156.1 CDS700316 1566 - 0.304598
NA PBI300a20b10.r1_55 hypothetical proteinPBI300a20b10.r1 CDS34601 471 + 0.295117
NA NC_006156.1_21 S-adenosylmethionine: tRNA ribosyltransferase-isomeraseNC_006156.1 CDS19905 1041 - 0.289145
NA NC_006156.1_686 hypothetical proteinNC_006156.1 CDS724977 1068 - 0.280899
NA NC_006156.1_130 conserved hypothetical proteinNC_006156.1 CDS124639 750 - 0.278667
NA NC_006156.1_818 hypothetical proteinNC_006156.1 CDS863669 948 + 0.276371
NA NC_006156.1_194 HemK family methylase, putativeNC_006156.1 CDS194467 822 + 0.262774
NA NC_006156.1_736 hypothetical proteinNC_006156.1 CDS777531 1014 - 0.291913
alaS NC_006156.1_218 alanyl-tRNA synthetaseNC_006156.1 CDS223766 1785 - 0.327171
argS NC_006156.1_595 arginyl-tRNA synthetaseNC_006156.1 CDS615949 1758 - 0.28157
asnS NC_006156.1_101 asparaginyl-tRNA synthetaseNC_006156.1 CDS98635 1389 + 0.307415
aspS NC_006156.1_449 aspartyl-tRNA synthetaseNC_006156.1 CDS467790 1761 - 0.286769
ctc NC_006156.1_788 general stress proteinNC_006156.1 CDS825120 549 + 0.338798
cysS NC_006156.1_600 cysteinyl-tRNA synthetaseNC_006156.1 CDS623912 1443 + 0.277893
dbpB PBI300a20b10.r1_31 decorin binding protein BPBI300a20b10.r1 CDS20177 555 - 0.315315
def NC_006156.1_63 polypeptide deformylaseNC_006156.1 CDS59871 561 - 0.294118
efp NC_006156.1_212 translation elongation factor PNC_006156.1 CDS218005 579 - 0.338515
fmt NC_006156.1_62 methionyl-tRNA formyltransferaseNC_006156.1 CDS58927 948 - 0.311181
frr NC_006156.1_121 ribosome releasing factorNC_006156.1 CDS118203 555 - 0.304505
ftsJ NC_006156.1_312 cell division proteinNC_006156.1 CDS318499 579 - 0.278066
fus-1 NC_006156.1_540 translation elongation factor GNC_006156.1 CDS551798 2082 - 0.352546
fus-2 NC_006156.1_695 translation elongation factor GNC_006156.1 CDS733707 2010 + 0.302985
gatA NC_006156.1_338 Glu-tRNA(Gln) amidotransferase, subunit ANC_006156.1 CDS348343 1446 - 0.305671
gatB NC_006156.1_337 Glu-tRNA(Gln) amidotransferase, subunit BNC_006156.1 CDS346896 1458 - 0.314815
gatC NC_006156.1_339 Glu-tRNA(Gln) amidotransferase, subunit CNC_006156.1 CDS349799 276 - 0.231884
gltX NC_006156.1_367 glutamyl-tRNA synthetaseNC_006156.1 CDS380671 1473 - 0.304141
glyS NC_006156.1_366 glycyl-tRNA synthetaseNC_006156.1 CDS379316 1338 - 0.319133
hisS NC_006156.1_136 histidyl-tRNA synthetaseNC_006156.1 CDS132292 1371 - 0.283735
hisT NC_006156.1_12 pseudouridylate synthase INC_006156.1 CDS11271 741 + 0.271255
ileS NC_006156.1_838 isoleucyl-tRNA synthetaseNC_006156.1 CDS883022 3129 - 0.291467
infA NC_006156.1_167 translation initiation factor 1NC_006156.1 CDS170857 222 + 0.31982
infB NC_006156.1_804 translation initiation factor 2NC_006156.1 CDS846373 2652 + 0.337858
infC NC_006156.1_188 translation initiation factor 3NC_006156.1 CDS188891 561 - 0.317291
ksgA NC_006156.1_591 dimethyladenosine transferaseNC_006156.1 CDS610993 846 - 0.247045
leuS NC_006156.1_250 leucyl-tRNA synthetaseNC_006156.1 CDS255252 2523 + 0.308363
map NC_006156.1_105 methionine aminopeptidaseNC_006156.1 CDS102835 756 - 0.337302
metG NC_006156.1_588 methionyl-tRNA synthetaseNC_006156.1 CDS606735 2175 - 0.284598
miaA NC_006156.1_824 2-methylthio-N6-isopentyladenosine tRNA modification enzymeNC_006156.1 CDS868568 921 + 0.27253
papS NC_006156.1_709 polynucleotide adenylyltransferaseNC_006156.1 CDS743285 1233 - 0.218167
pheS NC_006156.1_516 phenylalanyl-tRNA synthetase, alpha subunitNC_006156.1 CDS525302 1563 + 0.319258
pheT NC_006156.1_517 phenylalanyl-tRNA synthetase, beta subunitNC_006156.1 CDS526852 1701 + 0.28983
pnpA NC_006156.1_808 polyribonucleotide nucleotidyltransferaseNC_006156.1 CDS850712 2166 + 0.342567
prfA NC_006156.1_193 peptide chain release factor 1NC_006156.1 CDS193391 1074 + 0.28771
prfB NC_006156.1_72 peptide chain release factor 2NC_006156.1 CDS69996 1053 + 0.311491
proS NC_006156.1_403 prolyl-tRNA synthetaseNC_006156.1 CDS414955 1467 - 0.334697
pth NC_006156.1_789 peptidyl-tRNA hydrolaseNC_006156.1 CDS825682 558 + 0.304659
rbfA NC_006156.1_805 ribosome-binding factor ANC_006156.1 CDS849048 363 + 0.261708
rnpA NC_006156.1_444 ribonuclease P protein componentNC_006156.1 CDS462261 336 + 0.244048
rplA NC_006156.1_392 ribosomal protein L1NC_006156.1 CDS406826 681 - 0.30837
rplB NC_006156.1_484 ribosomal protein L2NC_006156.1 CDS500530 834 + 0.371703
rplC NC_006156.1_481 ribosomal protein L3NC_006156.1 CDS498932 621 + 0.359098
rplD NC_006156.1_482 ribosomal protein L4NC_006156.1 CDS499562 630 + 0.320635
rplE NC_006156.1_493 ribosomal protein L5NC_006156.1 CDS504506 549 + 0.318761
rplF NC_006156.1_496 ribosomal protein L6NC_006156.1 CDS505683 543 + 0.320442
rplI NC_006156.1_112 ribosomal protein L9NC_006156.1 CDS110896 501 - 0.279441
rplJ NC_006156.1_391 ribosomal protein L10NC_006156.1 CDS406333 489 - 0.296524
rplK NC_006156.1_393 ribosomal protein L11NC_006156.1 CDS407506 432 - 0.365741
rplL NC_006156.1_390 ribosomal protein L7/L12NC_006156.1 CDS405888 375 - 0.384
rplM NC_006156.1_335 ribosomal protein L13NC_006156.1 CDS345577 465 - 0.331183
rplN NC_006156.1_491 ribosomal protein L14NC_006156.1 CDS503812 369 + 0.360434
rplO NC_006156.1_500 ribosomal protein L15NC_006156.1 CDS507423 438 + 0.33105
rplP NC_006156.1_488 ribosomal protein L16NC_006156.1 CDS502908 417 + 0.378897
rplQ NC_006156.1_506 ribosomal protein L17NC_006156.1 CDS511190 372 + 0.282258
rplR NC_006156.1_497 ribosomal protein L18NC_006156.1 CDS506243 360 + 0.297222
rplS NC_006156.1_702 ribosomal protein L19NC_006156.1 CDS740318 366 + 0.306011
rplT NC_006156.1_186 ribosomal protein L20NC_006156.1 CDS188300 348 - 0.33046
rplU NC_006156.1_779 ribosomal protein L21NC_006156.1 CDS820477 312 + 0.275641
rplV NC_006156.1_486 ribosomal protein L22NC_006156.1 CDS501620 402 + 0.340796
rplW NC_006156.1_483 ribosomal protein L23NC_006156.1 CDS500212 297 + 0.299663
rplX NC_006156.1_492 ribosomal protein L24NC_006156.1 CDS504195 306 + 0.27451
rpmA NC_006156.1_781 ribosomal protein L27NC_006156.1 CDS821114 246 + 0.341463
rpmB NC_006156.1_346 ribosomal protein L28NC_006156.1 CDS357963 279 - 0.304659
rpmC NC_006156.1_489 ribosomal protein L29NC_006156.1 CDS503327 201 + 0.258706
rpmE NC_006156.1_228 ribosomal protein L31NC_006156.1 CDS234237 246 - 0.300813
rpmF NC_006156.1_706 ribosomal protein L32NC_006156.1 CDS742129 183 + 0.31694
rpmG NC_006156.1_396 ribosomal protein L33NC_006156.1 CDS408845 180 - 0.311111
rpmH NC_006156.1_443 ribosomal protein L34NC_006156.1 CDS462125 156 + 0.333333
rpmI NC_006156.1_187 ribosomal protein L35NC_006156.1 CDS188668 201 - 0.263682
rpmJ NC_006156.1_502 ribosomal protein L36NC_006156.1 CDS509190 114 + 0.263158
rpsA NC_006156.1_128 ribosomal protein S1NC_006156.1 CDS122332 1656 - 0.31099
rpsB NC_006156.1_123 ribosomal protein S2NC_006156.1 CDS119631 789 - 0.311787
rpsC NC_006156.1_487 ribosomal protein S3NC_006156.1 CDS502025 879 + 0.316268
rpsD NC_006156.1_618 ribosomal protein S4NC_006156.1 CDS644420 627 - 0.318979
rpsE NC_006156.1_498 ribosomal protein S5NC_006156.1 CDS506615 501 + 0.363273
rpsF NC_006156.1_115 ribosomal protein S6NC_006156.1 CDS112179 420 - 0.290476
rpsG NC_006156.1_386 ribosomal protein S7NC_006156.1 CDS397251 474 - 0.318565
rpsH NC_006156.1_495 ribosomal protein S8NC_006156.1 CDS505267 399 + 0.283208
rpsI NC_006156.1_334 ribosomal protein S9NC_006156.1 CDS345170 411 - 0.321168
rpsJ NC_006156.1_480 ribosomal protein S10NC_006156.1 CDS498580 312 + 0.342949
rpsK NC_006156.1_504 ribosomal protein S11NC_006156.1 CDS509726 393 + 0.343511
rpsL NC_006156.1_387 ribosomal protein S12NC_006156.1 CDS397749 375 - 0.370667
rpsM NC_006156.1_503 ribosomal protein S13NC_006156.1 CDS509321 378 + 0.328042
rpsN NC_006156.1_494 ribosomal protein S14NC_006156.1 CDS505072 186 + 0.327957
rpsO NC_006156.1_807 ribosomal protein S15NC_006156.1 CDS850431 267 + 0.303371
rpsP NC_006156.1_698 ribosomal protein S16NC_006156.1 CDS738611 261 + 0.325671
rpsQ NC_006156.1_490 ribosomal protein S17NC_006156.1 CDS503530 255 + 0.309804
rpsR NC_006156.1_113 ribosomal protein S18NC_006156.1 CDS111413 291 - 0.298969
rpsS NC_006156.1_485 ribosomal protein S19NC_006156.1 CDS501373 279 + 0.329749
rpsT NC_006156.1_232 ribosomal protein S20NC_006156.1 CDS236917 258 - 0.302326
rpsU NC_006156.1_255 ribosomal protein S21NC_006156.1 CDS265861 210 + 0.280952
serS NC_006156.1_225 seryl-tRNA synthetaseNC_006156.1 CDS229159 1278 - 0.313772
spoU NC_006156.1_50 spoU proteinNC_006156.1 CDS48443 657 - 0.296804
tgt NC_006156.1_812 tRNA-guanine transglycosylaseNC_006156.1 CDS856754 1128 + 0.312943
thrZ NC_006156.1_722 threonyl-tRNA synthetaseNC_006156.1 CDS759734 1749 + 0.316181
tlyA NC_006156.1_509 hemolysinNC_006156.1 CDS513994 720 + 0.256944
trmD NC_006156.1_701 tRNA guanine-N1 methyltransferaseNC_006156.1 CDS739621 720 + 0.301389
trsA NC_006156.1_5 tryptophanyl-tRNA synthetaseNC_006156.1 CDS5126 1038 - 0.316956
truB NC_006156.1_806 tRNA pseudouridine 55 synthaseNC_006156.1 CDS849413 849 + 0.277974
tsf NC_006156.1_122 translation elongation factor TSNC_006156.1 CDS118795 840 - 0.309524
tuf NC_006156.1_479 translation elongation factor TUNC_006156.1 CDS497344 1185 + 0.362025
tyrS NC_006156.1_365 tyrosyl-tRNA synthetaseNC_006156.1 CDS378102 1218 - 0.297209
valS NC_006156.1_739 valyl-tRNA synthetaseNC_006156.1 CDS780629 2628 + 0.30137
yacO NC_006156.1_519 rRNA methylaseNC_006156.1 CDS529653 741 - 0.265857