Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Treponema pallidum subsp. pallidum SS14, SS14
Number of genes found: 122
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Treponema pallidum subsp. pallidum SS14, SS14 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | TPASS_0231 | hypothetical protein | chromosome | CDS | 241496 | 651 | + | 0.549923 |
NA | TPASS_0339 | hypothetical protein | chromosome | CDS | 362209 | 996 | + | 0.483936 |
NA | TPASS_1029 | hypothetical protein | chromosome | CDS | 1124569 | 687 | - | 0.612809 |
NA | TPASS_0269 | hypothetical protein | chromosome | CDS | 285765 | 1449 | + | 0.503796 |
NA | TPASS_0927 | hypothetical protein | chromosome | CDS | 1009365 | 591 | + | 0.527919 |
NA | TPASS_0182 | hypothetical protein | chromosome | CDS | 200074 | 780 | + | 0.602564 |
NA | TPASS_0154 | hypothetical protein | chromosome | CDS | 177269 | 1038 | + | 0.585742 |
NA | TPASS_0222 | hypothetical protein | chromosome | CDS | 228152 | 447 | + | 0.525727 |
NA | TPASS_0744 | hypothetical protein | chromosome | CDS | 809755 | 327 | - | 0.568807 |
NA | TPASS_0054 | hypothetical protein | chromosome | CDS | 62961 | 960 | + | 0.53125 |
NA | TPASS_0770 | ATP-dependent RNA helicase | chromosome | CDS | 837426 | 1950 | + | 0.535385 |
NA | TPASS_0124 | possible GTP-binding protein | chromosome | CDS | 145568 | 1107 | + | 0.525745 |
NA | TPASS_0661 | hypothetical protein | chromosome | CDS | 725102 | 513 | - | 0.553606 |
NA | TPASS_0950 | hypothetical protein | chromosome | CDS | 1033622 | 285 | - | 0.557895 |
NA | TPASS_0907 | hypothetical protein | chromosome | CDS | 988815 | 525 | + | 0.571429 |
NA | TPASS_0459 | hypothetical protein | chromosome | CDS | 490539 | 786 | + | 0.596692 |
NA | TPASS_0604 | ribosome recycling factor | chromosome | CDS | 657053 | 552 | - | 0.528986 |
NA | TPASS_0754 | hypothetical protein | chromosome | CDS | 819624 | 1371 | - | 0.487965 |
NA | TPASS_0109 | possible rRNA methylase | chromosome | CDS | 123759 | 879 | - | 0.552901 |
alaS | TPASS_1017 | alanyl-tRNA synthetase | chromosome | CDS | 1109382 | 1818 | - | 0.545105 |
argS | TPASS_0831 | arginyl-tRNA synthetase | chromosome | CDS | 898927 | 1770 | - | 0.501695 |
asnS | TPASS_0609 | asparaginyl-tRNA synthetase | chromosome | CDS | 661119 | 1572 | + | 0.592875 |
aspS | TPASS_0985 | aspartyl-tRNA synthetase | chromosome | CDS | 1070147 | 1809 | + | 0.542841 |
ctc | TPASS_0372 | general stress protein | chromosome | CDS | 396956 | 591 | + | 0.558376 |
cysS | TPASS_0091 | cysteinyl-tRNA synthetase | chromosome | CDS | 99986 | 1563 | + | 0.545106 |
def | TPASS_0757 | polypeptide deformylase | chromosome | CDS | 822741 | 489 | - | 0.554192 |
efp | TPASS_0525 | translation elongation factor P | chromosome | CDS | 568865 | 564 | + | 0.498227 |
fmt | TPASS_0756 | methionyl-tRNA formyltransferase | chromosome | CDS | 821778 | 960 | - | 0.554167 |
ftsJ | TPASS_0682 | cell division protein | chromosome | CDS | 747628 | 603 | - | 0.570481 |
fusA1 | TPASS_0450 | translation elongation factor G | chromosome | CDS | 477953 | 2052 | + | 0.494152 |
fusA2 | TPASS_0767 | translation elongation factor G | chromosome | CDS | 833144 | 2088 | + | 0.529693 |
gatA | TPASS_1020 | glu-tRNA amidotransferase, subunit A | chromosome | CDS | 1113351 | 1521 | + | 0.55687 |
gatB | TPASS_1021 | glu-tRNA amidotransferase, subunit B | chromosome | CDS | 1114864 | 1530 | + | 0.521569 |
gatC | TPASS_1019 | glu-tRNA amidotransferase, subunit C | chromosome | CDS | 1112907 | 444 | + | 0.540541 |
gltX | TPASS_0673 | glutamyl-tRNA synthetase | chromosome | CDS | 739502 | 1614 | - | 0.563197 |
glyS | TPASS_0672 | glycyl-tRNA synthetase | chromosome | CDS | 737979 | 1389 | - | 0.519078 |
hemK | TPASS_0052 | protoporphyrinogen oxidase | chromosome | CDS | 60600 | 1047 | + | 0.552054 |
hisS | TPASS_0641 | histidyl-tRNA synthetase | chromosome | CDS | 703027 | 1329 | - | 0.498871 |
hisT | TPASS_0830 | pseudouridylate synthase | chromosome | CDS | 898075 | 843 | + | 0.508897 |
ileS | TPASS_0452 | isoleucyl-tRNA synthetase | chromosome | CDS | 480454 | 3276 | + | 0.4884 |
infA | TPASS_0097 | translation initiation factor 1 | chromosome | CDS | 106438 | 219 | + | 0.547945 |
infB | TPASS_0891 | translation initiation factor 2 | chromosome | CDS | 969214 | 2529 | - | 0.528667 |
infC | TPASS_0850 | translation initiation factor 3 | chromosome | CDS | 921187 | 540 | - | 0.514815 |
ksgA | TPASS_0337 | dimethyladenosine transferase | chromosome | CDS | 360834 | 858 | + | 0.480186 |
leuS | TPASS_0586 | leucyl-tRNA synthetase | chromosome | CDS | 638430 | 2637 | + | 0.535457 |
lysS1 | TPASS_0644 | lysyl-tRNA synthetase | chromosome | CDS | 706897 | 1587 | - | 0.47385 |
lysS2 | TPASS_1040 | lysyl-tRNA synthetase | chromosome | CDS | 1137610 | 1056 | - | 0.52178 |
map | TPASS_0842 | methionine aminopeptidase | chromosome | CDS | 916392 | 768 | - | 0.550781 |
miaA | TPASS_0637 | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 697149 | 951 | - | 0.526814 |
ntrB | TPASS_0980 | histidine phosphokinase/phophatase | chromosome | CDS | 1064467 | 1023 | + | 0.545455 |
pcnA | TPASS_0270 | polynucleotide adenylyltransferase | chromosome | CDS | 287287 | 1437 | + | 0.548365 |
pcnB | TPASS_0596 | polynucleotide adenylyltransferase | chromosome | CDS | 649042 | 1113 | - | 0.563342 |
pheS | TPASS_0973 | phenylalanyl-tRNA synthetase, subunit alpha | chromosome | CDS | 1057782 | 1662 | + | 0.578219 |
pheT | TPASS_0015 | phenylalanyl-tRNA synthetase subunit beta | chromosome | CDS | 13963 | 1815 | + | 0.500826 |
pnp | TPASS_0886 | polyribonucleotide nucleotidyltransferase | chromosome | CDS | 964387 | 2109 | - | 0.535325 |
prfA | TPASS_0051 | peptide chain release factor 1 | chromosome | CDS | 59575 | 1056 | + | 0.498106 |
prfB | TPASS_0576 | peptide chain release factor 2 | chromosome | CDS | 627252 | 1107 | + | 0.560072 |
proS | TPASS_0160 | prolyl-tRNA synthetase | chromosome | CDS | 182602 | 1854 | - | 0.559871 |
pth | TPASS_1011 | peptidyl-tRNA hydrolase | chromosome | CDS | 1103842 | 609 | - | 0.502463 |
rbfA | TPASS_0890 | ribosome-binding factor A | chromosome | CDS | 968837 | 381 | - | 0.490814 |
rplA | TPASS_0238 | ribosomal protein L1 | chromosome | CDS | 244783 | 681 | + | 0.537445 |
rplB | TPASS_0192 | ribosomal protein L2 | chromosome | CDS | 207796 | 822 | + | 0.562044 |
rplC | TPASS_0189 | ribosomal protein L3 | chromosome | CDS | 206179 | 627 | + | 0.54067 |
rplD | TPASS_0190 | ribosomal protein L4 | chromosome | CDS | 206819 | 651 | + | 0.493088 |
rplE | TPASS_0201 | ribosomal protein L5 | chromosome | CDS | 211650 | 558 | + | 0.464158 |
rplF | TPASS_0204 | ribosomal protein L6 | chromosome | CDS | 212828 | 540 | + | 0.518519 |
rplI | TPASS_0060 | ribosomal protein L9 | chromosome | CDS | 69170 | 471 | - | 0.47983 |
rplJ | TPASS_0239 | ribosomal protein L10 | chromosome | CDS | 245465 | 543 | + | 0.546961 |
rplK | TPASS_0237 | ribosomal protein L11 | chromosome | CDS | 244346 | 441 | + | 0.54195 |
rplL | TPASS_0240 | ribosomal protein L7/L12 | chromosome | CDS | 246116 | 390 | + | 0.520513 |
rplM | TPASS_1025 | ribosomal protein L13 | chromosome | CDS | 1118930 | 429 | - | 0.566434 |
rplN | TPASS_0199 | ribosomal protein L14 | chromosome | CDS | 210962 | 369 | + | 0.485095 |
rplO | TPASS_0207 | ribosomal protein L15 | chromosome | CDS | 214453 | 462 | + | 0.5671 |
rplP | TPASS_0196 | ribosomal protein L16 | chromosome | CDS | 210028 | 420 | + | 0.528571 |
rplQ | TPASS_0213 | ribosomal protein L17 | chromosome | CDS | 218231 | 495 | + | 0.523232 |
rplR | TPASS_0205 | ribosomal protein L18 | chromosome | CDS | 213376 | 363 | + | 0.498623 |
rplS | TPASS_0909 | ribosomal protein L19 | chromosome | CDS | 990060 | 372 | + | 0.521505 |
rplT | TPASS_0848 | ribosomal protein L20 | chromosome | CDS | 920533 | 369 | - | 0.523035 |
rplU | TPASS_0745 | ribosomal protein L21 | chromosome | CDS | 810094 | 318 | - | 0.518868 |
rplV | TPASS_0194 | ribosomal protein L22 | chromosome | CDS | 208923 | 375 | + | 0.528 |
rplW | TPASS_0191 | ribosomal protein L23 | chromosome | CDS | 207456 | 285 | + | 0.522807 |
rplX | TPASS_0200 | ribosomal protein L24 | chromosome | CDS | 211342 | 312 | + | 0.50641 |
rpmA | TPASS_0743 | ribosomal protein L27 | chromosome | CDS | 809461 | 264 | - | 0.541667 |
rpmB | TPASS_0362 | ribosomal protein L28 | chromosome | CDS | 385030 | 237 | + | 0.599156 |
rpmC | TPASS_0197 | ribosomal protein L29 | chromosome | CDS | 210462 | 219 | + | 0.452055 |
rpmD | TPASS_0206b | ribosomal protein L30 | chromosome | CDS | 214268 | 186 | + | 0.569892 |
rpmE | TPASS_0255 | ribosomal protein L31 | chromosome | CDS | 268378 | 204 | + | 0.490196 |
rpmF | TPASS_0807 | ribosomal protein L32 | chromosome | CDS | 878831 | 189 | + | 0.550265 |
rpmG | TPASS_0234 | ribosomal protein L33 | chromosome | CDS | 243173 | 171 | + | 0.497076 |
rpmH | TPASS_0951 | ribosomal protein L34 | chromosome | CDS | 1033910 | 156 | - | 0.596154 |
rpmI | TPASS_0849 | ribosomal protein L35 | chromosome | CDS | 920934 | 201 | - | 0.452736 |
rpmJ1 | TPASS_0209 | ribosomal protein L36 | chromosome | CDS | 216279 | 114 | + | 0.403509 |
rpsA | TPASS_0279 | ribosomal protein S1 | chromosome | CDS | 295426 | 2592 | + | 0.552469 |
rpsB | TPASS_0606 | ribosomal protein S2 | chromosome | CDS | 658671 | 876 | - | 0.5 |
rpsC | TPASS_0195 | ribosomal protein S3 | chromosome | CDS | 209281 | 744 | + | 0.513441 |
rpsD | TPASS_0306 | ribosomal protein S4 | chromosome | CDS | 324050 | 615 | + | 0.536585 |
rpsE | TPASS_0206a | ribosomal protein S5 | chromosome | CDS | 213747 | 519 | + | 0.518304 |
rpsF | TPASS_0063 | ribosomal protein S6 | chromosome | CDS | 70701 | 282 | - | 0.535461 |
rpsG | TPASS_0244 | ribosomal protein S7 | chromosome | CDS | 255066 | 471 | + | 0.549894 |
rpsH | TPASS_0203 | ribosomal protein S8 | chromosome | CDS | 212420 | 399 | + | 0.491228 |
rpsI | TPASS_1024 | ribosomal protein S9 | chromosome | CDS | 1118525 | 390 | - | 0.579487 |
rpsJ | TPASS_0188 | ribosomal protein S10 | chromosome | CDS | 205824 | 309 | + | 0.527508 |
rpsK | TPASS_0211 | ribosomal protein S11 | chromosome | CDS | 216791 | 381 | + | 0.52231 |
rpsL | TPASS_0243 | ribosomal protein S12 | chromosome | CDS | 254670 | 375 | + | 0.544 |
rpsM | TPASS_0210 | ribosomal protein S13 | chromosome | CDS | 216408 | 366 | + | 0.469945 |
rpsN | TPASS_0202 | ribosomal protein S14 | chromosome | CDS | 212219 | 186 | + | 0.537634 |
rpsO | TPASS_0887 | ribosomal protein S15 | chromosome | CDS | 966643 | 270 | - | 0.533333 |
rpsP | TPASS_0905 | ribosomal protein S16 | chromosome | CDS | 988130 | 372 | + | 0.599462 |
rpsQ | TPASS_0198 | ribosomal protein S17 | chromosome | CDS | 210695 | 255 | + | 0.529412 |
rpsR | TPASS_0061 | ribosomal protein S18 | chromosome | CDS | 69746 | 300 | - | 0.513333 |
rpsS | TPASS_0193 | ribosomal protein S19 | chromosome | CDS | 208627 | 288 | + | 0.472222 |
rpsT | TPASS_0250b | ribosomal protein S20 | chromosome | CDS | 263793 | 288 | + | 0.559028 |
rpsU | TPASS_0758 | ribosomal protein S21 | chromosome | CDS | 823270 | 210 | - | 0.485714 |
serS | TPASS_0647 | seryl-tRNA synthetase | chromosome | CDS | 709983 | 1281 | - | 0.494145 |
thrS | TPASS_0837 | threonyl-tRNA synthetase | chromosome | CDS | 907634 | 1779 | + | 0.578977 |
trmD | TPASS_0908 | tRNA (guanine-N1)-methyltransferase | chromosome | CDS | 989336 | 753 | + | 0.556441 |
trpS | TPASS_0632 | tryptophanyl-tRNA synthetase | chromosome | CDS | 691687 | 1014 | + | 0.566075 |
truB | TPASS_0889 | tRNA pseudouridine 55 synthase | chromosome | CDS | 967759 | 1101 | - | 0.564033 |
tsf | TPASS_0605 | translation elongation factor TS | chromosome | CDS | 657708 | 873 | - | 0.558992 |
tuf | TPASS_0187 | translation elongation factor TU | chromosome | CDS | 204265 | 1488 | + | 0.518817 |
tyrS | TPASS_0834 | tyrosyl-tRNA synthetase | chromosome | CDS | 902380 | 1251 | - | 0.518785 |
valS | TPASS_1035 | valyl-tRNA synthetase | chromosome | CDS | 1129889 | 2871 | - | 0.53605 |