Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Leptospira interrogans serovar lai str. 56601
Number of genes found: 172
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Leptospira interrogans serovar lai str. 56601 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Elongation factor Tu | chromosome I | CDS | 760747 | 1206 | + | 0.436153 | |
NA | tRNA/rRNA methyltransferase | chromosome I | CDS | 1835739 | 663 | - | 0.355958 | |
NA | methionine aminopeptidase | chromosome I | CDS | 2433701 | 759 | - | 0.40975 | |
NA | conserved hypothetical protein | chromosome I | CDS | 1417735 | 555 | - | 0.365766 | |
NA | hypothetical protein | chromosome I | CDS | 551866 | 258 | + | 0.329457 | |
NA | Acetyltransferases | chromosome I | CDS | 3726328 | 678 | - | 0.342183 | |
NA | conserved hypothetical protein | chromosome I | CDS | 11073 | 990 | + | 0.374747 | |
NA | Polypeptide deformylase | chromosome I | CDS | 2411669 | 537 | + | 0.405959 | |
NA | mannose-1-phosphate guanyltransferase | chromosome I | CDS | 1574080 | 804 | + | 0.358209 | |
NA | conserved hypothetical protein | chromosome I | CDS | 382316 | 1314 | - | 0.385084 | |
NA | Peptidyl-tRNA hydrolase | chromosome I | CDS | 2324736 | 573 | - | 0.354276 | |
NA | aminoglycoside N6'-acetyltransferase | chromosome I | CDS | 1096219 | 243 | + | 0.386831 | |
NA | hypothetical protein | chromosome I | CDS | 209694 | 573 | + | 0.350785 | |
NA | hypothetical protein | chromosome I | CDS | 3183121 | 204 | + | 0.318627 | |
NA | unknown protein | chromosome I | CDS | 263604 | 411 | - | 0.399027 | |
NA | Acetyltransferases | chromosome I | CDS | 3512309 | 792 | - | 0.383838 | |
NA | methionyl-tRNA formyltransferase | chromosome I | CDS | 2364545 | 639 | - | 0.381847 | |
NA | Predicted translation factor SUA5 | chromosome I | CDS | 2187289 | 948 | + | 0.347046 | |
NA | Translation elongation factor Ts | chromosome I | CDS | 3266058 | 600 | - | 0.416667 | |
NA | unknown protein | chromosome I | CDS | 817172 | 354 | + | 0.384181 | |
NA | ATP-dependent RNA helicase | chromosome I | CDS | 3394804 | 1623 | - | 0.378312 | |
NA | unknown protein | chromosome I | CDS | 1267951 | 501 | - | 0.363273 | |
NA | unknown protein | chromosome I | CDS | 2963050 | 912 | + | 0.377193 | |
NA | ribosome recycling factor | chromosome I | CDS | 3264764 | 555 | - | 0.407207 | |
NA | rRNA methylase | chromosome I | CDS | 652399 | 462 | + | 0.380952 | |
NA | SpoU rRNA Methylase family protein | chromosome I | CDS | 794989 | 855 | - | 0.350877 | |
NA | hypothetical protein | chromosome I | CDS | 492599 | 219 | - | 0.305936 | |
NA | putative lipoprotein | chromosome I | CDS | 2610773 | 639 | + | 0.320814 | |
NA | unknown | chromosome I | CDS | 12655 | 738 | + | 0.342818 | |
NA | Ribonuclease D | chromosome I | CDS | 4062449 | 1266 | + | 0.35782 | |
NA | ATP-dependent RNA helicase | chromosome I | CDS | 4024617 | 1566 | + | 0.386973 | |
NA | putative epimerase | chromosome I | CDS | 1107515 | 1350 | + | 0.397037 | |
NA | conserved hypothetical protein | chromosome I | CDS | 2854401 | 1269 | - | 0.37431 | |
NA | RNA methyltransferase | chromosome I | CDS | 284811 | 1182 | + | 0.347716 | |
NA | conserved hypothetical protein | chromosome I | CDS | 3824231 | 744 | - | 0.358871 | |
NA | Peptide chain release factor | chromosome I | CDS | 2131069 | 468 | + | 0.33547 | |
NA | unknown protein | chromosome I | CDS | 1923576 | 357 | + | 0.319328 | |
NA | Peptidyl-tRNA hydrolase | chromosome I | CDS | 3782101 | 564 | - | 0.363475 | |
NA | unknown protein | chromosome I | CDS | 3397345 | 468 | + | 0.429487 | |
NA | probable sigma-54 modulation protein | chromosome I | CDS | 1194261 | 288 | + | 0.322917 | |
NA | methionyl-tRNA(fMet) N-formyltransferase protein | chromosome I | CDS | 1587978 | 954 | + | 0.310273 | |
NA | tRNA-guanine transglycosylase | chromosome I | CDS | 3072283 | 1125 | + | 0.397333 | |
NA | conserved hypothetical protein | chromosome I | CDS | 1142614 | 1314 | + | 0.394977 | |
NA | GTP-binding protein | chromosome I | CDS | 2307638 | 1098 | - | 0.388889 | |
NA | hypothetical protein | chromosome I | CDS | 1844343 | 255 | + | 0.282353 | |
NA | probable Acetyltransferase, GNAT family protein | chromosome I | CDS | 1218314 | 606 | - | 0.364686 | |
NA | RNA methyltransferase | chromosome I | CDS | 101861 | 1248 | + | 0.330929 | |
NA | Ribonuclease D | chromosome I | CDS | 2888505 | 639 | - | 0.356808 | |
NA | Polyribonucleotide nucleotidyltransferase | chromosome I | CDS | 941309 | 2097 | + | 0.395804 | |
NA | Acetyltransferases | chromosome I | CDS | 3278149 | 747 | - | 0.309237 | |
NA | unknown protein | chromosome I | CDS | 2972080 | 324 | + | 0.385802 | |
NA | predicted translation factor SUA5 | chromosome I | CDS | 23057 | 609 | + | 0.325123 | |
NA | hypothetical protein | chromosome I | CDS | 184756 | 153 | + | 0.326797 | |
NA | hypothetical protein | chromosome I | CDS | 2528936 | 126 | + | 0.293651 | |
NA | conserved hypothetical protein | chromosome I | CDS | 3509303 | 999 | + | 0.386386 | |
NA | hypothetical protein | chromosome I | CDS | 700810 | 723 | + | 0.369295 | |
NA | hypothetical protein | chromosome I | CDS | 1455724 | 261 | + | 0.436782 | |
NA | RNA methyltransferase | chromosome I | CDS | 2954425 | 1365 | + | 0.320147 | |
NA | hypothetical protein | chromosome I | CDS | 2732634 | 783 | - | 0.326948 | |
NA | LipL45 protein | chromosome I | CDS | 2272712 | 1173 | - | 0.387894 | |
NA | Acetyltransferases | chromosome I | CDS | 1096458 | 222 | + | 0.378378 | |
NA | hypothetical protein | chromosome I | CDS | 528555 | 954 | - | 0.336478 | |
NA | hypothetical protein | chromosome I | CDS | 581690 | 1140 | - | 0.335965 | |
LB202 | queuosine biosynthesis protein | chromosome II | CDS | 194483 | 1059 | - | 0.350331 | |
LB294 | elongation factor P | chromosome II | CDS | 293655 | 717 | - | 0.379358 | |
alaS | alanyl-tRNA synthetase | chromosome I | CDS | 3367293 | 2934 | - | 0.398432 | |
amic | putative amidase | chromosome I | CDS | 1326606 | 1503 | + | 0.430472 | |
argS | arginyl-tRNA synthetase | chromosome I | CDS | 1684372 | 1791 | + | 0.357901 | |
asnS | asparaginyl-tRNA synthetase | chromosome I | CDS | 1839820 | 1308 | + | 0.393731 | |
aspS | Aspartyl-tRNA synthetase | chromosome I | CDS | 1677306 | 1806 | + | 0.381506 | |
codA | cytosine deaminase | chromosome I | CDS | 4303934 | 606 | + | 0.30198 | |
cysS | Cysteinyl-tRNA synthetase | chromosome I | CDS | 1836491 | 1416 | - | 0.366525 | |
fusA1 | Translation elongation and release factor | chromosome I | CDS | 310064 | 2121 | - | 0.423857 | |
fusA2 | Translation elongation and release factor | chromosome I | CDS | 758831 | 1866 | + | 0.404609 | |
gatA | glutamyl-tRNAGln amidotransferase subunit A | chromosome I | CDS | 2481108 | 1464 | - | 0.380464 | |
gatB | glutamyl-tRNAGln amidotransferase subunit B | chromosome I | CDS | 249960 | 1461 | + | 0.402464 | |
gatC | Glu-tRNAGln amidotransferase subunit C | chromosome I | CDS | 2482568 | 291 | - | 0.367698 | |
gltX | Glutamyl-tRNA synthetase | chromosome I | CDS | 4158346 | 1566 | - | 0.378033 | |
glyS | Glycyl-tRNA synthetase | chromosome I | CDS | 1381357 | 1395 | - | 0.387097 | |
hemK | protoporphyrinogen oxidase HemK | chromosome I | CDS | 304004 | 861 | - | 0.336818 | |
hisS1 | histidyl-tRNA synthetase | chromosome I | CDS | 57723 | 1320 | - | 0.362879 | |
ileS | Isoleucyl-tRNA synthetase | chromosome I | CDS | 1317064 | 2745 | + | 0.3898 | |
infA | Translation initiation factor IF-1 | chromosome I | CDS | 773120 | 219 | + | 0.429224 | |
infB1 | Translation initiation factor IF-2 | chromosome I | CDS | 937088 | 2643 | + | 0.443057 | |
infB2 | Putative translation initiation factor eIF-2B | chromosome I | CDS | 2849208 | 1095 | + | 0.39726 | |
infC | Translation initiation factor IF3 | chromosome I | CDS | 1245801 | 540 | + | 0.383333 | |
ksgA | dimethyladenosine transferase | chromosome I | CDS | 401414 | 942 | - | 0.354565 | |
leuS | Leucyl-tRNA synthetase | chromosome I | CDS | 3668371 | 2487 | + | 0.395657 | |
ligT | 2'-5' RNA ligase | chromosome I | CDS | 115445 | 549 | - | 0.349727 | |
lysS1 | Lysyl-tRNA synthetase | chromosome I | CDS | 1971908 | 1488 | - | 0.384409 | |
lysS2 | lysyl-tRNA synthetase | chromosome II | CDS | 325387 | 1017 | - | 0.351032 | |
miaA | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome I | CDS | 1518169 | 894 | + | 0.394855 | |
papS | Poly(A) polymerase | chromosome I | CDS | 1945541 | 1299 | - | 0.342571 | |
pcnB | Probable poly(A) polymerase | chromosome I | CDS | 2979090 | 1464 | - | 0.368852 | |
pheS | Phenylalanyl-tRNA synthetase alpha chain | chromosome I | CDS | 4118731 | 1026 | - | 0.352827 | |
prfA | Peptide chain release factor 1 | chromosome I | CDS | 122863 | 1065 | - | 0.385915 | |
prfB | Peptide chain release factor 2 | chromosome I | CDS | 3734940 | 1104 | + | 0.40308 | |
prfC | Peptide chain release factor 3 | chromosome I | CDS | 2714116 | 1773 | - | 0.397067 | |
prmA | ribosomal protein L11 methyltransferase | chromosome I | CDS | 1385286 | 903 | + | 0.380952 | |
proS | prolyl-tRNA synthetase | chromosome I | CDS | 3258503 | 1731 | - | 0.383593 | |
rbfA1 | ribosome binding factor A | chromosome I | CDS | 939740 | 354 | + | 0.423729 | |
rfbA | glucose-1-phosphate thymidylyltransferase | chromosome I | CDS | 3765971 | 1047 | + | 0.39255 | |
rfbF1 | Glucose-1-phosphate cytidylyltransferase | chromosome I | CDS | 1626991 | 768 | + | 0.404948 | |
rfbM2 | GDP-mannose pyrophosphorylase | chromosome I | CDS | 3858359 | 729 | - | 0.347051 | |
rimM | RimM protein, required for 16S rRNA processing | chromosome I | CDS | 2361116 | 531 | - | 0.367232 | |
rluB | ribosomal large subunit pseudouridine synthase B | chromosome I | CDS | 2268055 | 741 | - | 0.364372 | |
rluC1 | Ribosomal large subunit pseudouridine synthase C | chromosome I | CDS | 1490749 | 1098 | + | 0.313297 | |
rluC2 | ribosomal large subunit pseudouridine synthase C | chromosome I | CDS | 2872154 | 879 | + | 0.30603 | |
rluD | ribosomal large subunit pseudouridine synthase D | chromosome I | CDS | 221168 | 939 | + | 0.368477 | |
rplA | ribosomal protein L1 | chromosome I | CDS | 3385988 | 693 | - | 0.4329 | |
rplB | ribosomal protein L2 | chromosome I | CDS | 763875 | 840 | + | 0.442857 | |
rplC | ribosomal protein L3 | chromosome I | CDS | 762287 | 621 | + | 0.452496 | |
rplD | ribosomal protein L4 | chromosome I | CDS | 762925 | 636 | + | 0.389937 | |
rplE | ribosomal protein L5 | chromosome I | CDS | 767779 | 549 | + | 0.404372 | |
rplF | ribosomal protein L6 | chromosome I | CDS | 768980 | 540 | + | 0.385185 | |
rplG | ribosomal protein L7/L12 | chromosome I | CDS | 3384994 | 384 | - | 0.458333 | |
rplI | ribosomal protein L9 | chromosome I | CDS | 1675478 | 450 | + | 0.395556 | |
rplJ | ribosomal protein L10 | chromosome I | CDS | 3385427 | 534 | - | 0.434457 | |
rplK | ribosomal protein L11 | chromosome I | CDS | 3386687 | 429 | - | 0.452214 | |
rplM | Ribosomal protein L13 | chromosome I | CDS | 3370719 | 450 | - | 0.397778 | |
rplN | ribosomal protein L14 | chromosome I | CDS | 767024 | 393 | + | 0.424936 | |
rplO | ribosomal protein L15 | chromosome I | CDS | 770607 | 543 | + | 0.416206 | |
rplP | ribosomal protein L16 | chromosome I | CDS | 766049 | 414 | + | 0.432367 | |
rplQ | ribosomal protein L17 | chromosome I | CDS | 775891 | 516 | + | 0.339147 | |
rplR | ribosomal protein L18 | chromosome I | CDS | 769523 | 369 | + | 0.425474 | |
rplS | Ribosomal protein L19 | chromosome I | CDS | 2360055 | 417 | - | 0.381295 | |
rplT | ribosomal protein L20 | chromosome I | CDS | 1246576 | 354 | + | 0.392655 | |
rplU | ribosomal protein L21 | chromosome I | CDS | 849193 | 315 | + | 0.396825 | |
rplV | ribosomal protein L22 | chromosome I | CDS | 765004 | 333 | + | 0.408408 | |
rplW | ribosomal protein L23 | chromosome I | CDS | 763557 | 315 | + | 0.393651 | |
rplX | ribosomal protein L24 | chromosome I | CDS | 767416 | 360 | + | 0.347222 | |
rplY | ribosomal protein L25 | chromosome I | CDS | 3782711 | 639 | - | 0.413146 | |
rpmA | ribosomal protein L27 | chromosome I | CDS | 849820 | 255 | + | 0.431373 | |
rpmB | ribosomal protein L28 | chromosome I | CDS | 2129703 | 285 | + | 0.424561 | |
rpmC | ribosomal protein L29 | chromosome I | CDS | 766459 | 285 | + | 0.354386 | |
rpmD | ribosomal protein L30 | chromosome I | CDS | 770412 | 180 | + | 0.366667 | |
rpmE | ribosomal protein L31 | chromosome I | CDS | 1027423 | 204 | - | 0.382353 | |
rpmF | Ribosomal protein L32 | chromosome I | CDS | 1263031 | 201 | + | 0.378109 | |
rpmH | ribosomal protein L34 | chromosome I | CDS | 184417 | 162 | + | 0.425926 | |
rpmI | ribosomal protein L35 | chromosome I | CDS | 1246373 | 204 | + | 0.372549 | |
rpsA1 | ribosomal protein S1 | chromosome I | CDS | 651240 | 1155 | + | 0.365368 | |
rpsA2 | Ribosomal protein S1 | chromosome I | CDS | 1259667 | 1683 | + | 0.37552 | |
rpsB | ribosomal protein S2 | chromosome I | CDS | 3266669 | 885 | - | 0.418079 | |
rpsC | ribosomal protein S3 | chromosome I | CDS | 765349 | 678 | + | 0.396755 | |
rpsD | ribosomal protein S4 | chromosome I | CDS | 774266 | 624 | + | 0.405449 | |
rpsE | ribosomal protein S5 | chromosome I | CDS | 769854 | 546 | + | 0.417582 | |
rpsF | ribosomal protein S6 | chromosome I | CDS | 1674425 | 276 | + | 0.42029 | |
rpsG | ribosomal protein S7 | chromosome I | CDS | 3375610 | 474 | - | 0.409283 | |
rpsH | ribosomal protein S8 | chromosome I | CDS | 768552 | 402 | + | 0.385572 | |
rpsI | ribosomal protein S9 | chromosome I | CDS | 3370310 | 420 | - | 0.407143 | |
rpsJ | ribosomal protein S10 | chromosome I | CDS | 761967 | 309 | + | 0.411003 | |
rpsK | ribosomal protein S11 | chromosome I | CDS | 773844 | 411 | + | 0.445255 | |
rpsL | ribosomal protein S12 | chromosome I | CDS | 3376101 | 375 | - | 0.448 | |
rpsM | ribosomal protein S13 | chromosome I | CDS | 773464 | 378 | + | 0.402116 | |
rpsN | ribosomal protein S14 | chromosome I | CDS | 768347 | 186 | + | 0.446237 | |
rpsO | ribosomal protein S15 | chromosome I | CDS | 941007 | 291 | + | 0.323024 | |
rpsP | ribosomal protein S16 | chromosome I | CDS | 2361869 | 345 | - | 0.365217 | |
rpsQ | ribosomal protein S17 | chromosome I | CDS | 766753 | 270 | + | 0.366667 | |
rpsR | ribosomal protein S18 | chromosome I | CDS | 1675157 | 312 | + | 0.397436 | |
rpsS | ribosomal protein S19 | chromosome I | CDS | 764723 | 282 | + | 0.375887 | |
rpsT | ribosomal protein S20 | chromosome I | CDS | 3762362 | 267 | + | 0.378277 | |
rpsU | Ribosomal protein S21 | chromosome I | CDS | 2210359 | 258 | + | 0.352713 | |
serS | Seryl-tRNA synthetase | chromosome I | CDS | 4312315 | 1254 | - | 0.363636 | |
thrS | threonyl-tRNA synthetase | chromosome I | CDS | 1242400 | 1917 | + | 0.380282 | |
tlyA | hemolysin | chromosome I | CDS | 324579 | 831 | + | 0.350181 | |
trmD | tRNA (Guanine-N1)-methyltransferase | chromosome I | CDS | 2360431 | 696 | - | 0.405172 | |
trmU | Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | chromosome I | CDS | 1486160 | 1128 | + | 0.393617 | |
trpS | Tryptophanyl-tRNA synthetase | chromosome I | CDS | 405456 | 969 | - | 0.370485 | |
truA | tRNA pseudouridine synthase A | chromosome I | CDS | 2721734 | 624 | + | 0.362179 | |
truB | tRNA pseudouridine synthase B | chromosome I | CDS | 940128 | 852 | + | 0.367371 | |
tyrS | tyrosyl tRNA synthetase | chromosome I | CDS | 2217027 | 1218 | + | 0.360427 | |
valS | Valyl-tRNA synthetase | chromosome I | CDS | 3729536 | 2406 | + | 0.402743 |