Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Borrelia recurrentis A1, A1
Number of genes found: 115
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Borrelia recurrentis A1, A1 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BRE_451 | uncharacterized conserved protein | chromosome | CDS | 489365 | 312 | - | 0.253205 |
NA | BRE_688 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | chromosome | CDS | 741194 | 1065 | - | 0.273239 |
NA | BRE_741 | uncharacterized conserved protein | chromosome | CDS | 795492 | 1005 | - | 0.292537 |
NA | BRE_23 | ribosomal large subunit pseudouridine synthase D | chromosome | CDS | 29680 | 981 | - | 0.251784 |
NA | BRE_194 | HemK family methylase | chromosome | CDS | 205872 | 834 | + | 0.255396 |
NA | BRE_132 | pseudouridylate synthase | chromosome | CDS | 137739 | 747 | - | 0.289157 |
alaS | BRE_220 | alanyl-tRNA synthetase | chromosome | CDS | 236557 | 1779 | - | 0.306914 |
argS | BRE_598 | arginyl-tRNA synthetase | chromosome | CDS | 635293 | 1758 | - | 0.266212 |
asnS | BRE_103 | asparaginyl-tRNA synthetase | chromosome | CDS | 110510 | 1386 | + | 0.290765 |
aspS | BRE_448 | aspartyl-tRNA synthetase | chromosome | CDS | 485200 | 1752 | - | 0.27169 |
ctc | BRE_795 | 50S ribosomal protein L25, general stress protein | chromosome | CDS | 845313 | 549 | + | 0.302368 |
cysS | BRE_603 | cysteinyl-tRNA synthetase | chromosome | CDS | 643358 | 1458 | + | 0.274348 |
def | BRE_68 | polypeptide deformylase | chromosome | CDS | 71849 | 498 | - | 0.291165 |
efp | BRE_214 | elongation factor EF-P | chromosome | CDS | 230861 | 579 | - | 0.302245 |
fmt | BRE_67 | methionyl-tRNA formyltransferase | chromosome | CDS | 70923 | 930 | - | 0.3 |
frr | BRE_123 | ribosome releasing factor | chromosome | CDS | 130891 | 555 | - | 0.311712 |
ftsJ | BRE_320 | ribosomal RNA methyltransferase | chromosome | CDS | 342956 | 582 | - | 0.278351 |
fus-1 | BRE_544 | translation elongation factor G | chromosome | CDS | 570400 | 2082 | - | 0.329011 |
fus-2 | BRE_698 | translation elongation factor G | chromosome | CDS | 750044 | 2025 | + | 0.311111 |
gatA | BRE_345 | glu-tRNA amidotransferase, subunit A | chromosome | CDS | 371690 | 1446 | - | 0.294606 |
gatB | BRE_344 | Glu-tRNA(Gln) amidotransferase, subunit B | chromosome | CDS | 370243 | 1458 | - | 0.300412 |
gltX | BRE_371 | glutamyl-tRNA synthetase | chromosome | CDS | 402878 | 1521 | - | 0.303748 |
glyS | BRE_370 | glycyl-tRNA synthetase | chromosome | CDS | 401526 | 1338 | - | 0.323617 |
hisS | BRE_138 | histidyl-tRNA synthetase | chromosome | CDS | 145395 | 1371 | - | 0.281546 |
hisT | BRE_17 | pseudouridylate synthase I | chromosome | CDS | 24322 | 738 | + | 0.254743 |
ileS | BRE_844 | isoleucyl-tRNA synthetase | chromosome | CDS | 907370 | 3135 | - | 0.276236 |
infA | BRE_167 | translation initiation factor IF-1 | chromosome | CDS | 182206 | 222 | + | 0.292793 |
infB | BRE_812 | translation initiation factor IF-2 | chromosome | CDS | 868497 | 2640 | + | 0.330682 |
infC | BRE_188 | translation initiation factor IF-3 | chromosome | CDS | 200308 | 561 | - | 0.326203 |
ksgA | BRE_594 | dimethyladenosine transferase | chromosome | CDS | 630340 | 825 | - | 0.242424 |
leuS | BRE_252 | leucyl-tRNA synthetase | chromosome | CDS | 270831 | 2529 | + | 0.295769 |
lysS | BRE_665 | lysyl-tRNA synthetase | chromosome | CDS | 716720 | 1599 | - | 0.287054 |
map | BRE_107 | methionine aminopeptidase | chromosome | CDS | 114912 | 753 | - | 0.310757 |
metG | BRE_592 | methionyl-tRNA synthetase | chromosome | CDS | 626995 | 2181 | - | 0.275103 |
miaA | BRE_831 | 2-methylthio-N6-isopentyladenosine tRNA modification enzyme | chromosome | CDS | 890791 | 903 | + | 0.275748 |
papS | BRE_711 | tRNA nucleotidyltransferase (CCA-adding enzyme) | chromosome | CDS | 760233 | 1299 | - | 0.220939 |
pheS | BRE_518 | phenylalanyl-tRNA synthetase alpha chain | chromosome | CDS | 543261 | 1548 | + | 0.315245 |
pheT | BRE_519 | phenylalanyl-tRNA synthetase beta chain | chromosome | CDS | 544801 | 1695 | + | 0.282006 |
pnpA | BRE_816 | polyribonucleotide nucleotidyltransferase | chromosome | CDS | 872947 | 2154 | + | 0.328691 |
prfA | BRE_193 | peptide chain release factor A | chromosome | CDS | 204782 | 1080 | + | 0.282407 |
prfB | BRE_77 | peptide chain release factor RF-2 | chromosome | CDS | 82023 | 1044 | + | 0.279693 |
proS | BRE_402 | prolyl-tRNA synthetase | chromosome | CDS | 434244 | 1476 | - | 0.308266 |
pth | BRE_796 | peptidyl-tRNA hydrolase | chromosome | CDS | 845867 | 567 | + | 0.291005 |
queA | BRE_26 | S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine synthetase) | chromosome | CDS | 32909 | 1059 | - | 0.292729 |
rbfA | BRE_813 | ribosome-binding factor A | chromosome | CDS | 871126 | 390 | + | 0.261538 |
rimM | BRE_703 | 16S rRNA processing protein RimM | chromosome | CDS | 755472 | 501 | + | 0.277445 |
rluA | BRE_825 | RNA pseudouridylate synthase family protein | chromosome | CDS | 885875 | 975 | + | 0.261538 |
rnpA | BRE_442 | ribonuclease P protein component | chromosome | CDS | 479462 | 345 | + | 0.26087 |
rplA | BRE_390 | 50S ribosomal protein L1 | chromosome | CDS | 426555 | 675 | - | 0.308148 |
rplB | BRE_487 | 50S ribosomal protein L2 | chromosome | CDS | 517991 | 834 | + | 0.381295 |
rplC | BRE_484 | 50S ribosomal protein L3 | chromosome | CDS | 516394 | 630 | + | 0.355556 |
rplD | BRE_485 | 50S ribosomal protein L4 | chromosome | CDS | 517025 | 630 | + | 0.31746 |
rplE | BRE_496 | 50S ribosomal protein L5 | chromosome | CDS | 521950 | 549 | + | 0.31694 |
rplF | BRE_499 | 50S ribosomal protein L6 | chromosome | CDS | 523126 | 543 | + | 0.316759 |
rplI | BRE_114 | 50S ribosomal protein L9 | chromosome | CDS | 123058 | 495 | - | 0.272727 |
rplJ | BRE_389 | 50S ribosomal protein L10 | chromosome | CDS | 426056 | 489 | - | 0.292434 |
rplK | BRE_391 | 50S ribosomal protein L11 | chromosome | CDS | 427229 | 435 | - | 0.356322 |
rplL | BRE_388 | 50S ribosomal protein L7/L12 | chromosome | CDS | 425611 | 372 | - | 0.389785 |
rplM | BRE_342 | 50S ribosomal protein L13 | chromosome | CDS | 368936 | 450 | - | 0.317778 |
rplN | BRE_494 | 50S ribosomal protein L14 | chromosome | CDS | 521262 | 369 | + | 0.379404 |
rplO | BRE_503 | 50S ribosomal protein L15 | chromosome | CDS | 524859 | 438 | + | 0.321918 |
rplP | BRE_491 | 50S ribosomal protein L16 | chromosome | CDS | 520334 | 417 | + | 0.390887 |
rplQ | BRE_509 | 50S ribosomal protein L17 | chromosome | CDS | 528609 | 372 | + | 0.30914 |
rplR | BRE_500 | 50S ribosomal protein L18 | chromosome | CDS | 523686 | 360 | + | 0.302778 |
rplS | BRE_705 | 50S ribosomal protein L19 | chromosome | CDS | 756666 | 369 | + | 0.306233 |
rplT | BRE_186 | 50S ribosomal protein L20 | chromosome | CDS | 199720 | 348 | - | 0.281609 |
rplU | BRE_786 | 50S ribosomal protein L21 | chromosome | CDS | 840661 | 321 | + | 0.317757 |
rplV | BRE_489 | 50S ribosomal protein L22 | chromosome | CDS | 519119 | 363 | + | 0.344353 |
rplW | BRE_486 | 50S ribosomal protein L23 | chromosome | CDS | 517676 | 297 | + | 0.282828 |
rplX | BRE_495 | 50S ribosomal protein L24 | chromosome | CDS | 521641 | 306 | + | 0.29085 |
rpmA | BRE_788 | 50S ribosomal protein L27 | chromosome | CDS | 841304 | 246 | + | 0.308943 |
rpmB | BRE_352 | 50S ribosomal protein L28 | chromosome | CDS | 381286 | 279 | - | 0.283154 |
rpmC | BRE_492 | 50S ribosomal protein L29 | chromosome | CDS | 520754 | 201 | + | 0.288557 |
rpmD | BRE_502 | 50S ribosomal protein L30 | chromosome | CDS | 524555 | 312 | + | 0.285256 |
rpmE | BRE_228 | 50S ribosomal protein L31 | chromosome | CDS | 247132 | 246 | - | 0.276423 |
rpmF | BRE_708 | 50S ribosomal protein L32 | chromosome | CDS | 759077 | 183 | + | 0.349727 |
rpmG | BRE_395 | 50S ribosomal protein L33 | chromosome | CDS | 428567 | 180 | - | 0.322222 |
rpmH | BRE_441 | 50S ribosomal protein L34 | chromosome | CDS | 479326 | 156 | + | 0.320513 |
rpmI | BRE_187 | 50S ribosomal protein L35 | chromosome | CDS | 200088 | 198 | - | 0.282828 |
rpmJ | BRE_505 | 50S ribosomal protein L36 | chromosome | CDS | 526623 | 114 | + | 0.254386 |
rpsA | BRE_130 | 30S ribosomal protein S1 | chromosome | CDS | 135411 | 1668 | - | 0.30036 |
rpsB | BRE_125 | 30S ribosomal protein S2 | chromosome | CDS | 132341 | 765 | - | 0.303268 |
rpsC | BRE_490 | 30S ribosomal protein S3 | chromosome | CDS | 519485 | 831 | + | 0.297232 |
rpsD | BRE_620 | 30S ribosomal protein S4 | chromosome | CDS | 661797 | 627 | - | 0.325359 |
rpsE | BRE_501 | 30S ribosomal protein S5 | chromosome | CDS | 524057 | 495 | + | 0.343434 |
rpsF | BRE_117 | 30S ribosomal protein S6 | chromosome | CDS | 124321 | 405 | - | 0.281481 |
rpsG | BRE_384 | 30S ribosomal protein S7 | chromosome | CDS | 416985 | 474 | - | 0.335443 |
rpsH | BRE_498 | 30S ribosomal protein S8 | chromosome | CDS | 522708 | 399 | + | 0.308271 |
rpsI | BRE_341 | 30S ribosomal protein S9 | chromosome | CDS | 368515 | 411 | - | 0.340633 |
rpsJ | BRE_483 | 30S ribosomal protein S10 | chromosome | CDS | 516049 | 312 | + | 0.346154 |
rpsK | BRE_507 | 30S ribosomal protein S11 | chromosome | CDS | 527154 | 390 | + | 0.369231 |
rpsL | BRE_385 | 30S ribosomal protein S12 | chromosome | CDS | 417473 | 375 | - | 0.376 |
rpsM | BRE_506 | 30S ribosomal protein S13 | chromosome | CDS | 526746 | 378 | + | 0.335979 |
rpsN | BRE_497 | 30S ribosomal protein S14 | chromosome | CDS | 522513 | 186 | + | 0.354839 |
rpsO | BRE_815 | 30S ribosomal protein S15 | chromosome | CDS | 872592 | 342 | + | 0.292398 |
rpsP | BRE_701 | 30S ribosomal protein S16 | chromosome | CDS | 754959 | 252 | + | 0.325397 |
rpsQ | BRE_493 | 30S ribosomal protein S17 | chromosome | CDS | 520960 | 255 | + | 0.329412 |
rpsR | BRE_115 | 30S ribosomal protein S18 | chromosome | CDS | 123566 | 291 | - | 0.292096 |
rpsS | BRE_488 | 30S ribosomal protein S19 | chromosome | CDS | 518834 | 279 | + | 0.344086 |
rpsT | BRE_232 | 30S ribosomal protein S20 | chromosome | CDS | 249815 | 327 | - | 0.287462 |
rpsU_1 | BRE_258 | 30S ribosomal protein S21 | chromosome | CDS | 282020 | 210 | + | 0.271429 |
rpsU_2 | BRE_263 | 30S ribosomal protein S21 | chromosome | CDS | 288794 | 210 | + | 0.271429 |
serS | BRE_225 | seryl-tRNA synthetase | chromosome | CDS | 242037 | 1275 | - | 0.318431 |
spoU | BRE_55 | spoU protein | chromosome | CDS | 60424 | 657 | - | 0.280061 |
tgt | BRE_820 | tRNA-guanine transglycosylase | chromosome | CDS | 878967 | 1128 | + | 0.304965 |
thrZ | BRE_726 | threonyl-tRNA synthetase | chromosome | CDS | 776649 | 1752 | + | 0.317352 |
tlyA | BRE_512 | hemolysin | chromosome | CDS | 531358 | 792 | + | 0.270202 |
trmD | BRE_704 | tRNA-(guanine-N1)-methyltransferase | chromosome | CDS | 755969 | 723 | + | 0.319502 |
trsA | BRE_10 | tryptophanyl-tRNA synthetase | chromosome | CDS | 18085 | 1053 | - | 0.304843 |
truB | BRE_814 | tRNA pseudouridine 55 synthase | chromosome | CDS | 871525 | 846 | + | 0.280142 |
tsf | BRE_124 | translation elongation factor EF-TS | chromosome | CDS | 131483 | 837 | - | 0.305854 |
tuf | BRE_482 | translation elongation factor TU | chromosome | CDS | 514819 | 1185 | + | 0.356962 |
tyrS | BRE_369 | tyrosyl-tRNA synthetase | chromosome | CDS | 400301 | 1221 | - | 0.298935 |
valS | BRE_745 | valyl-tRNA synthetase | chromosome | CDS | 800723 | 2634 | + | 0.29347 |
yacO | BRE_521 | rRNA methylase | chromosome | CDS | 547590 | 735 | - | 0.258503 |