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2024-05-09 04:52:27

Gene list

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COG category: Transcription
Organism: Borrelia afzelii, PKo

Number of genes found: 23

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Borrelia afzelii, PKo
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BAPKO_0356 fibronectin/fibrinogen-binding protein, putativePKO-g-P-chrIn1v1.w1 CDS354298 1419 + 0.24172
NA BAPKO_0364 transcription factor, putativePKO-g-P-chrIn1v1.w1 CDS363920 489 - 0.282209
NA BAPKO_0553 conserved hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS541420 777 + 0.262548
NA BAPKO_0775 hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS774955 402 - 0.218905
NA BAPKO_0833 hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS824705 1185 + 0.243882
greA BAPKO_0134 transcription elongation factorPKO-g-P-chrIn1v1.w1 CDS127075 2703 - 0.278579
mfd BAPKO_0663 transcription-repair coupling factorPKO-g-P-chrIn1v1.w1 CDS654189 3375 - 0.261333
ntrA BAPKO_0472 RNA polymerase sigma-54 factorPKO-g-P-chrIn1v1.w1 CDS473862 1260 - 0.243651
nusA BAPKO_0853 N-utilization substance protein APKO-g-P-chrIn1v1.w1 CDS846779 1449 + 0.31539
nusB BAPKO_0108 N-utilization substance protein BPKO-g-P-chrIn1v1.w1 CDS105101 414 - 0.289855
nusG BAPKO_0409 transcription antitermination factorPKO-g-P-chrIn1v1.w1 CDS409550 555 - 0.322523
recG BAPKO_0612 DNA recombinasePKO-g-P-chrIn1v1.w1 CDS600301 2061 + 0.311984
rho BAPKO_0239 transcription termination factor RhoPKO-g-P-chrIn1v1.w1 CDS234504 1548 - 0.322351
rnc BAPKO_0748 ribonuclease IIIPKO-g-P-chrIn1v1.w1 CDS744487 738 + 0.315718
rpoA BAPKO_0530 DNA-directed RNA polymerasePKO-g-P-chrIn1v1.w1 CDS511560 1035 + 0.302415
rpoB BAPKO_0404 DNA-directed RNA polymerasePKO-g-P-chrIn1v1.w1 CDS403897 3468 - 0.338235
rpoC BAPKO_0403 DNA-directed RNA polymerasePKO-g-P-chrIn1v1.w1 CDS399748 4134 - 0.329947
rpoD BAPKO_0756 RNA polymerase sigma-70 factorPKO-g-P-chrIn1v1.w1 CDS751926 1896 + 0.317511
rpoS BAPKO_0819 RNA polymerase sigma factorPKO-g-P-chrIn1v1.w1 CDS815946 801 - 0.285893
spo0J BAPKO_0455 stage 0 sporulation protein JPKO-g-P-chrIn1v1.w1 CDS455034 783 - 0.261814
spoT BAPKO_0200 guanosine-3,5-bis(diphosphate) 3- pyrophosphohydrolasePKO-g-P-chrIn1v1.w1 CDS195145 2004 + 0.290419
xylR-1 BAPKO_0737 xylose operon regulatory proteinPKO-g-P-chrIn1v1.w1 CDS737879 1209 + 0.286187
xylR-2 BAPKO_0884 xylose operon regulatory proteinPKO-g-P-chrIn1v1.w1 CDS882830 939 + 0.309904