Gene list
Applied filters:
COG category: Transcription
Organism: Leptospira borgpetersenii serovar Hardjo-bovis L550, L550
Number of genes found: 105
 | ||||||
| Show UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Leptospira borgpetersenii serovar Hardjo-bovis L550, L550 | ||||||||
|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | LBL_0107 | Transcriptional regulator, marR family | chromosome 1 | CDS | 120286 | 441 | + | 0.371882 |
| NA | LBL_2009 | Transcriptional regulator, AcrR-family | chromosome 1 | CDS | 2344394 | 705 | - | 0.419858 |
| NA | LBL_4076 | AraC-family transcriptional regulator | chromosome 2 | CDS | 85508 | 1140 | - | 0.37807 |
| NA | LBL_0695 | AraC-family transcriptional regulator | chromosome 1 | CDS | 786454 | 1206 | - | 0.311774 |
| NA | LBL_1087 | Transcriptional regulator, HTH domain | chromosome 1 | CDS | 1277179 | 345 | - | 0.336232 |
| NA | LBL_2641 | Transcriptional regulator | chromosome 1 | CDS | 3132865 | 549 | - | 0.409836 |
| NA | LBL_2587 | RNA-binding protein | chromosome 1 | CDS | 3062636 | 261 | + | 0.371648 |
| NA | LBL_1865 | ParB-like protein | chromosome 1 | CDS | 2172893 | 399 | + | 0.373434 |
| NA | LBL_4111 | Serine phosphatase RsbU, regulator of sigma subunit | chromosome 2 | CDS | 126453 | 1749 | - | 0.408805 |
| NA | LBL_1897 | RNA binding protein | chromosome 1 | CDS | 2212050 | 366 | + | 0.412568 |
| NA | LBL_2901 | Serine phosphatase RsbU, regulator of sigma subunit | chromosome 1 | CDS | 3451433 | 2397 | + | 0.365874 |
| NA | LBL_2989 | Transcription antiterminator | chromosome 1 | CDS | 3558678 | 540 | - | 0.344444 |
| NA | LBL_1086 | Transcriptional regulator | chromosome 1 | CDS | 1276118 | 306 | - | 0.343137 |
| NA | LBL_0791 | Serine phosphatase RsbU, regulator of sigma subunit | chromosome 1 | CDS | 901672 | 1764 | - | 0.406463 |
| NA | LBL_1396 | Sigma factor PP2C-like phosphatase | chromosome 1 | CDS | 1627712 | 981 | - | 0.376147 |
| NA | LBL_2815 | Bi-functional protein, with a transcription regulator domain | chromosome 1 | CDS | 3350853 | 795 | + | 0.432704 |
| NA | LBL_1008 | Transcriptional regulator | chromosome 1 | CDS | 1175782 | 615 | + | 0.421138 |
| NA | LBL_0280 | Transcriptional regulator | chromosome 1 | CDS | 331364 | 546 | + | 0.408425 |
| NA | LBL_0529 | Transcriptional regulator | chromosome 1 | CDS | 580979 | 945 | - | 0.406349 |
| NA | LBL_1769 | Transcriptional regulator, HTH domain | chromosome 1 | CDS | 2061900 | 309 | + | 0.378641 |
| NA | LBL_2725 | Receiver component of a two-component response regulator | chromosome 1 | CDS | 3229763 | 666 | + | 0.421922 |
| NA | LBL_1293 | Transcriptional regulator, MarR family | chromosome 1 | CDS | 1518768 | 441 | - | 0.387755 |
| NA | LBL_0113 | Transcriptional regulator, AraC family | chromosome 1 | CDS | 127865 | 1623 | - | 0.33703 |
| NA | LBL_2389 | Transcriptional regulator, ArsR family | chromosome 1 | CDS | 2831439 | 387 | + | 0.452196 |
| NA | LBL_2801 | Transcriptional regulator, AcrR-family | chromosome 1 | CDS | 3326216 | 594 | + | 0.383838 |
| NA | LBL_2820 | Transcriptional regulator, AcrR-family | chromosome 1 | CDS | 3360060 | 513 | + | 0.407407 |
| NA | LBL_1985 | Transcriptional regulator, AcrR-family | chromosome 1 | CDS | 2315186 | 552 | + | 0.38587 |
| NA | LBL_1524 | Transcriptional regulator, ArsR family | chromosome 1 | CDS | 1782161 | 300 | - | 0.393333 |
| NA | LBL_0589 | Transcriptional regulator, PadR family | chromosome 1 | CDS | 657260 | 351 | + | 0.393162 |
| NA | LBL_4001 | ParB-like protein | chromosome 2 | CDS | 875 | 846 | + | 0.353428 |
| NA | LBL_2102 | Transcriptional regulator | chromosome 1 | CDS | 2461606 | 534 | - | 0.423221 |
| NA | LBL_4085 | Regulator of sigma subunit | chromosome 2 | CDS | 94982 | 1485 | - | 0.40404 |
| NA | LBL_2588 | Transcriptional regulator | chromosome 1 | CDS | 3063022 | 774 | - | 0.426357 |
| NA | LBL_1900 | Serine phosphatase sigma subunit regulator | chromosome 1 | CDS | 2214093 | 1254 | + | 0.416268 |
| NA | LBL_2531 | Transcriptional regulator, AcrR-family | chromosome 1 | CDS | 2999881 | 615 | + | 0.406504 |
| NA | LBL_4013 | Response regulator of a two component regulatory system | chromosome 2 | CDS | 14693 | 693 | + | 0.445887 |
| NA | LBL_0785 | Transcriptional regulator, AcrR-family | chromosome 1 | CDS | 895916 | 600 | + | 0.381667 |
| NA | LBL_2677 | ATP-dependent DNA helicase, recG-related | chromosome 1 | CDS | 3170793 | 2175 | - | 0.428046 |
| NA | LBL_4253 | Transcriptional regulator, AcrR-family | chromosome 2 | CDS | 289596 | 699 | + | 0.420601 |
| NA | LBL_2234 | Transcriptional regulator (ArsR family) | chromosome 1 | CDS | 2631684 | 327 | + | 0.357798 |
| NA | LBL_0343 | Transcriptional regulator, ArsR family | chromosome 1 | CDS | 403477 | 312 | - | 0.333333 |
| NA | LBL_4072 | Transcriptional regulator, AcrR-family | chromosome 2 | CDS | 81214 | 696 | - | 0.363506 |
| NA | LBL_4073 | AraC-family transcriptional regulator | chromosome 2 | CDS | 81958 | 1203 | - | 0.33084 |
| NA | LBL_1838 | RNA polymerase sigma subunit | chromosome 1 | CDS | 2141536 | 801 | - | 0.404494 |
| NA | LBL_2769 | Serine/threonine kinase with GAF domain | chromosome 1 | CDS | 3274820 | 5211 | + | 0.387642 |
| NA | LBL_2382 | Serine phosphatase, regulator of sigma subunit | chromosome 1 | CDS | 2824681 | 1131 | - | 0.431477 |
| NA | LBL_2983 | ParB-like protein | chromosome 1 | CDS | 3552310 | 876 | - | 0.405251 |
| NA | LBL_0536 | Superfamily II DNA and RNA helicase | chromosome 1 | CDS | 588970 | 1650 | - | 0.424848 |
| NA | LBL_3001 | RNA polymerase sigma subunit | chromosome 1 | CDS | 3572238 | 885 | + | 0.477966 |
| NA | LBL_2037 | Acetyltransferase | chromosome 1 | CDS | 2382110 | 498 | + | 0.417671 |
| NA | LBL_1617 | Transcriptional regulator, AcrR-family | chromosome 1 | CDS | 1896653 | 579 | - | 0.379965 |
| NA | LBL_4219 | RNA polymerase sigma subunit | chromosome 2 | CDS | 253444 | 522 | - | 0.386973 |
| NA | LBL_2782 | RNA polymerase sigma subunit | chromosome 1 | CDS | 3302255 | 525 | + | 0.333333 |
| NA | LBL_0203 | RNA polymerase sigma subunit | chromosome 1 | CDS | 242189 | 549 | + | 0.35337 |
| NA | LBL_2926 | Conserved hypothetical protein | chromosome 1 | CDS | 3478350 | 390 | - | 0.353846 |
| NA | LBL_0222 | Acetyltransferase | chromosome 1 | CDS | 266610 | 744 | - | 0.376344 |
| NA | LBL_0335 | Receiver component of a response regulator | chromosome 1 | CDS | 394780 | 678 | + | 0.356932 |
| NA | LBL_1376 | RNA polymerase sigma subunit | chromosome 1 | CDS | 1609293 | 549 | + | 0.409836 |
| NA | LBL_2894 | RNA polymerase sigma subunit | chromosome 1 | CDS | 3445191 | 600 | + | 0.363333 |
| NA | LBL_0697 | Hypothetical protein | chromosome 1 | CDS | 788177 | 390 | + | 0.346154 |
| NA | LBL_4259 | Response regulator | chromosome 2 | CDS | 295938 | 726 | + | 0.422865 |
| NA | LBL_0908 | RNA polymerase sigma subunit | chromosome 1 | CDS | 1055368 | 624 | + | 0.407051 |
| NA | LBL_0988 | Hypothetical protein | chromosome 1 | CDS | 1153032 | 369 | - | 0.325203 |
| NA | LBL_1164 | Transcriptional regulator | chromosome 1 | CDS | 1377126 | 321 | + | 0.386293 |
| NA | LBL_0290 | RNA polymerase sigma subunit | chromosome 1 | CDS | 345503 | 906 | + | 0.368653 |
| NA | LBL_1942 | Transcriptional regulator | chromosome 1 | CDS | 2265624 | 420 | + | 0.397619 |
| NA | LBL_4021 | ParB-like protein | chromosome 2 | CDS | 23518 | 708 | + | 0.412429 |
| NA | LBL_2167 | Transcriptional regulator/sugar kinase | chromosome 1 | CDS | 2546058 | 897 | + | 0.455964 |
| NA | LBL_0557 | Transcriptional regulator, AcrR-family | chromosome 1 | CDS | 616197 | 594 | + | 0.397306 |
| NA | LBL_2870 | Response regulator | chromosome 1 | CDS | 3422632 | 774 | + | 0.361757 |
| NA | LBL_2441 | RNA polymerase sigma subunit | chromosome 1 | CDS | 2890973 | 510 | + | 0.396078 |
| NA | LBL_0036 | Transcriptional regulator, AcrR-family | chromosome 1 | CDS | 43621 | 624 | + | 0.379808 |
| NA | LBL_2312 | Receiver component of a two-component response regulator | chromosome 1 | CDS | 2737434 | 702 | + | 0.411681 |
| NA | LBL_2897 | Response regulator | chromosome 1 | CDS | 3446842 | 705 | + | 0.417021 |
| NA | LBL_2789 | Transcriptional regulator, marR family | chromosome 1 | CDS | 3311928 | 450 | + | 0.433333 |
| NA | LBL_1303 | Transcriptional regulator | chromosome 1 | CDS | 1532708 | 426 | - | 0.389671 |
| NA | LBL_0902 | Sigma factor regulatory protein | chromosome 1 | CDS | 1049300 | 1383 | + | 0.404917 |
| NA | LBL_2847 | DNA/RNA helicase Superfamily II | chromosome 1 | CDS | 3396690 | 2856 | - | 0.397759 |
| NA | LBL_1319 | Sensor protein of a two-component response regulator | chromosome 1 | CDS | 1548648 | 669 | + | 0.427504 |
| NA | LBL_0187 | Transcriptional regulator | chromosome 1 | CDS | 218888 | 450 | - | 0.397778 |
| greA | LBL_2374 | greA transcription elongation factor-related protein | chromosome 1 | CDS | 2815299 | 2784 | - | 0.412716 |
| hrcA | LBL_2646 | Heat-inducible transcriptional repressor, HrcA | chromosome 1 | CDS | 3138907 | 1029 | - | 0.41691 |
| lexA | LBL_1071 | Repressor lexA | chromosome 1 | CDS | 1256005 | 612 | - | 0.447712 |
| marR | LBL_2581 | Transcriptional regulator (MarR family) | chromosome 1 | CDS | 3058142 | 459 | + | 0.418301 |
| mfd | LBL_1885 | Transcription-repair coupling factor | chromosome 1 | CDS | 2198023 | 3531 | - | 0.433588 |
| nusA | LBL_2088 | Transcription elongation factor | chromosome 1 | CDS | 2446953 | 1389 | - | 0.468682 |
| nusB | LBL_0634 | Transcription antitermination protein | chromosome 1 | CDS | 706022 | 417 | + | 0.426859 |
| nusG | LBL_0738 | Transcription antiterminator | chromosome 1 | CDS | 833650 | 546 | + | 0.448718 |
| rho | LBL_2351 | Transcription termination factor Rho | chromosome 1 | CDS | 2789422 | 1446 | + | 0.462656 |
| rnc | LBL_0940 | Ribonuclease III | chromosome 1 | CDS | 1088661 | 744 | + | 0.395161 |
| rpoA | LBL_0480 | DNA-directed RNA polymerase, alpha subunit | chromosome 1 | CDS | 526888 | 978 | + | 0.44274 |
| rpoA-1 | LBL_0440 | DNA-directed RNA polymerase, alpha subunit | chromosome 1 | CDS | 497601 | 978 | + | 0.44274 |
| rpoB | LBL_0743 | DNA-directed RNA polymerase, beta subunit | chromosome 1 | CDS | 836592 | 3681 | + | 0.470524 |
| rpoC | LBL_0744 | DNA-directed RNA polymerase, beta subunit | chromosome 1 | CDS | 840275 | 4215 | + | 0.4828 |
| rpoD | LBL_1601 | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) | chromosome 1 | CDS | 1875873 | 1758 | + | 0.415245 |
| rpoE-1 | LBL_2561 | RNA polymerase sigma subunit | chromosome 1 | CDS | 3040508 | 543 | + | 0.348066 |
| rpoE-2 | LBL_2910 | RNA polymerase sigma subunit | chromosome 1 | CDS | 3463048 | 510 | - | 0.380392 |
| rpoN | LBL_1670 | DNA-directed RNA polymerase sigma-54 subunit | chromosome 1 | CDS | 1949387 | 1422 | - | 0.40436 |
| rsbU-1 | LBL_2832 | Serine phosphatase RsbU, regulator of sigma subunit | chromosome 1 | CDS | 3375763 | 2088 | - | 0.390805 |
| rsbU-2 | LBL_2436 | Serine phosphatase RsbU, regulator of sigma subunit | chromosome 1 | CDS | 2884679 | 1797 | + | 0.407902 |
| rsbU-3 | LBL_2435 | Serine phosphatase RsbU, regulator of sigma subunit | chromosome 1 | CDS | 2882936 | 1740 | + | 0.402874 |
| rsbU-4 | LBL_1463 | Serine phosphatase RsbU, regulator of sigma subunit | chromosome 1 | CDS | 1709446 | 2811 | + | 0.415866 |
| spoT | LBL_2240 | GTP pyrophosphokinase | chromosome 1 | CDS | 2638840 | 2025 | - | 0.440988 |
| srmB | LBL_2858 | ATP-dependent RNA helicase (superfamily II) | chromosome 1 | CDS | 3411882 | 1542 | - | 0.418288 |
| vacB | LBL_0073 | Exoribonuclease R | chromosome 1 | CDS | 85207 | 2268 | - | 0.388889 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|