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2024-05-11 16:57:31

Gene list

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COG category: Transcription
Organism: Treponema pallidum subsp. pallidum SS14, SS14

Number of genes found: 34

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema pallidum subsp. pallidum SS14, SS14
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TPASS_0770 ATP-dependent RNA helicasechromosome CDS837426 1950 + 0.535385
NA TPASS_0854 hypothetical proteinchromosome CDS926432 4602 - 0.485007
NA TPASS_0380 possible DNA repair helicasechromosome CDS406441 1821 - 0.548051
NA TPASS_0665 hypothetical proteinchromosome CDS728470 756 - 0.575397
NA TPASS_0431 hypothetical proteinchromosome CDS460243 822 + 0.575426
NA TPASS_0701 possible DNA-directed RNA polymerasechromosome CDS768414 204 - 0.514706
NA TPASS_0739 hypothetical proteinchromosome CDS805638 1197 - 0.458647
NA TPASS_0461 hypothetical proteinchromosome CDS492075 360 + 0.577778
NA TPASS_0093 hypothetical proteinchromosome CDS102091 648 + 0.552469
NA TPASS_1029 hypothetical proteinchromosome CDS1124569 687 - 0.612809
NA TPASS_0458 hypothetical proteinchromosome CDS489932 579 + 0.585492
NA TPASS_0709 RNA polymerase sigma-28 factorchromosome CDS777336 789 + 0.508238
NA TPASS_0218 possible sigma factor SigB regulation proteinchromosome CDS223384 1470 + 0.463946
NA TPASS_0219 possible sigma factor SigB regulation proteinchromosome CDS224857 2148 + 0.416667
carD TPASS_0511 transcription factorchromosome CDS548433 627 + 0.497608
fhlA TPASS_0082 formate hydrogenlyase transcriptional activator FhlAchromosome CDS90626 1803 - 0.5269
greA TPASS_0019 transcription elongation factor GreAchromosome CDS21555 489 + 0.453988
nusA TPASS_0892 N utilization substance protein Achromosome CDS971918 1458 - 0.496571
nusB TPASS_1015 N utilization substance protein Bchromosome CDS1107802 426 - 0.532864
nusG TPASS_0236 transcription antitermination proteinchromosome CDS243682 558 + 0.528674
parB TPASS_0271 chromosome partitioning proteinchromosome CDS288720 975 - 0.531282
recG TPASS_0687 DNA recombinasechromosome CDS754269 2061 - 0.425036
rho TPASS_0254 transcription termination factor Rhochromosome CDS266700 1560 + 0.489744
rnb TPASS_0805 exoribonuclease IIchromosome CDS874930 2280 - 0.555263
rnc TPASS_0809 ribonuclease IIIchromosome CDS879313 765 + 0.568627
rpoA TPASS_0212 DNA-directed RNA polymerase, alpha subunitchromosome CDS217186 1056 + 0.493371
rpoB TPASS_0241 DNA-directed RNA polymerase, beta subunitchromosome CDS246768 3537 + 0.499293
rpoC TPASS_0242 DNA-directed RNA polymerase, beta subunitchromosome CDS250317 4251 + 0.505999
rpoD TPASS_0493 RNA polymerase sigma-70 factorchromosome CDS529323 1836 + 0.489651
rpoE TPASS_0092 RNA polymerase sigma-24 factorchromosome CDS101619 489 + 0.541922
rpoN TPASS_0111 RNA polymerase sigma-54 factorchromosome CDS126971 1428 + 0.478992
sigA TPASS_1012 RNA polymerase sigma-43 factorchromosome CDS1104485 936 - 0.501068
trcF TPASS_0344 transcription-repair coupling factorchromosome CDS367639 3423 - 0.49664
troR TPASS_0167 cation-activated repressor proteinchromosome CDS189653 462 + 0.508658