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2024-05-10 13:23:04

Gene list

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COG category: Replication, recombination and repair
Organism: Borrelia garinii High passage (300), PBi

Number of genes found: 85

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Borrelia garinii High passage (300), PBi
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA NC_006156.1_13 hypothetical proteinNC_006156.1 CDS12004 591 + 0.233503
NA PBI300a20b10.r1_10 antigen, S1PBI300a20b10.r1 CDS6480 1194 - 0.293132
NA PBI300a34d11.s1_1 hypothetical proteinPBI300a34d11.s1 CDS1 708 - 0.254237
NA NC_006156.1_745 antigen, p83/100NC_006156.1 CDS788888 2082 + 0.286263
NA NC_006156.1_297 smg proteinNC_006156.1 CDS304578 816 - 0.301471
NA NC_006156.1_724 hypothetical proteinNC_006156.1 CDS762100 1446 + 0.246888
NA NC_006156.1_765 hypothetical proteinNC_006156.1 CDS808790 1047 - 0.227316
NA NC_006156.1_98 DNA mismatch repair protein, putativeNC_006156.1 CDS94444 2337 - 0.253744
NA NC_006156.1_161 hypothetical proteinNC_006156.1 CDS162672 1749 - 0.265294
NA PBI300a21a10.s1_16 hypothetical proteinPBI300a21a10.s1 CDS11934 1908 + 0.23847
NA NT_108227.1_2 hypothetical proteinNT_108227.1 CDS427 696 - 0.258621
NA NC_006156.1_651 serine/threonine kinase, putativeNC_006156.1 CDS688515 1689 - 0.23209
NA NC_006156.1_204 conserved hypothetical proteinNC_006156.1 CDS207678 375 - 0.258667
NA NC_006156.1_231 hbbU proteinNC_006156.1 CDS236578 327 - 0.302752
NA NC_006156.1_549 hypothetical proteinNC_006156.1 CDS562707 405 - 0.202469
NA NT_108230.1_16 hypothetical proteinNT_108230.1 CDS10989 114 - 0.201754
NA NC_006156.1_629 small primase-like proteinNC_006156.1 CDS658914 549 - 0.260474
NA NC_006156.1_844 hypothetical proteinNC_006156.1 CDS898542 546 - 0.239927
NA NT_108227.1_31 hypothetical proteinNT_108227.1 CDS24438 3236 + 0.290173
NA NC_006156.1_515 hypothetical proteinNC_006156.1 CDS518802 6489 + 0.256896
NA NC_006156.1_664 hypothetical proteinNC_006156.1 CDS702932 357 + 0.352941
NA PBI300a20b10.r1_84 hypothetical proteinPBI300a20b10.r1 CDS53945 756 - 0.261905
NA PBI300a20b10.r1_81 hypothetical proteinPBI300a20b10.r1 CDS51939 708 - 0.261299
NA G1Mb28h10.r1_23 hypothetical proteinG1Mb28h10.r1 CDS18634 492 + 0.270325
NA PBI300a21a10.s1_15 hypothetical proteinPBI300a21a10.s1 CDS11247 450 + 0.288889
NA NC_006156.1_833 hypothetical proteinNC_006156.1 CDS877140 117 + 0.230769
NA NC_006156.1_75 hypothetical proteinNC_006156.1 CDS73318 1029 + 0.22449
NA NT_108227.1_27 hypothetical proteinNT_108227.1 CDS21007 1113 + 0.21204
NA NC_006156.1_553 hypothetical proteinNC_006156.1 CDS566163 1488 - 0.227823
NA PBI300a20b10.r1_41 lipoproteinPBI300a20b10.r1 CDS27477 684 + 0.29386
NA NT_108230.1_19 hypothetical proteinNT_108230.1 CDS11475 363 - 0.225895
NA NC_006156.1_569 hypothetical proteinNC_006156.1 CDS583571 1773 + 0.249859
NA PBI300a21a10.s1_14 hypothetical proteinPBI300a21a10.s1 CDS10228 825 + 0.252121
NA PBI300a01b12.s1_21 hypothetical proteinPBI300a01b12.s1 CDS17898 816 - 0.29902
NA NC_006156.1_73 hypothetical proteinNC_006156.1 CDS71030 1410 + 0.235461
NA NC_006156.1_657 hypothetical proteinNC_006156.1 CDS695471 1143 + 0.24147
NA G1a22e11.r1_37 hypothetical proteinG1a22e11.r1 CDS25151 417 + 0.266187
NA NC_006156.1_735 hypothetical proteinNC_006156.1 CDS776539 786 + 0.291349
NA NC_006156.1_191 conserved hypothetical proteinNC_006156.1 CDS191110 810 - 0.291358
NA NC_006156.1_69 hypothetical proteinNC_006156.1 CDS65600 1473 + 0.235574
NA PBI300a20b10.r1_80 hypothetical proteinPBI300a20b10.r1 CDS50924 783 - 0.256705
NA NC_006156.1_459 hypothetical proteinNC_006156.1 CDS476881 990 + 0.227273
NA NC_006156.1_237 hypothetical proteinNC_006156.1 CDS242881 771 - 0.290532
NA PBI300PCR17p13_13 hypothetical proteinPBI300PCR17p13 CDS7462 3864 - 0.245342
NA PBI300a20b10.r1_29 hypothetical proteinPBI300a20b10.r1 CDS19091 324 + 0.231481
dnaA NC_006156.1_440 chromosomal replication initiator proteinNC_006156.1 CDS458786 1455 + 0.276289
dnaB NC_006156.1_111 replicative DNA helicaseNC_006156.1 CDS109504 1368 - 0.304094
dnaE NC_006156.1_579 DNA polymerase III, subunit alphaNC_006156.1 CDS594379 3486 + 0.303787
dnaG NC_006156.1_713 DNA primaseNC_006156.1 CDS748231 1782 + 0.26936
dnaN NC_006156.1_441 DNA polymerase III, subunit betaNC_006156.1 CDS460481 1161 + 0.262705
dnaX NC_006156.1_465 DNA polymerase III, subunits gamma and tauNC_006156.1 CDS484948 1683 + 0.296494
exoA NC_006156.1_534 exodeoxyribonuclease IIINC_006156.1 CDS545224 768 + 0.296875
gyrA NC_006156.1_438 DNA gyrase, subunit ANC_006156.1 CDS454251 2433 - 0.318537
gyrB NC_006156.1_439 DNA gyrase, subunit BNC_006156.1 CDS456695 1905 - 0.32336
hrpA NC_006156.1_831 ATP-dependent helicaseNC_006156.1 CDS872039 2475 - 0.283232
lig NC_006156.1_552 DNA ligaseNC_006156.1 CDS564156 1983 + 0.28946
mag NC_006156.1_427 3-methyladenine DNA glycosylaseNC_006156.1 CDS443327 561 - 0.31016
mfd NC_006156.1_626 transcription-repair coupling factorNC_006156.1 CDS652342 3375 - 0.268741
mutL NC_006156.1_209 DNA mismatch repair proteinNC_006156.1 CDS214376 1836 + 0.25817
mutS NC_006156.1_800 DNA mismatch repair proteinNC_006156.1 CDS841164 2589 + 0.274623
napA-2 NC_006156.1_694 neutrophil activating proteinNC_006156.1 CDS733096 531 + 0.280603
nth NC_006156.1_746 endonuclease IIINC_006156.1 CDS791277 636 + 0.27044
parC NC_006156.1_35 DNA topoisomerase IVNC_006156.1 CDS32001 1881 - 0.272196
parE NC_006156.1_36 DNA topoisomerase IVNC_006156.1 CDS33881 1800 - 0.298889
polA NC_006156.1_548 DNA polymerase INC_006156.1 CDS559981 2730 - 0.271795
priA NC_006156.1_14 primosomal protein NNC_006156.1 CDS12587 1983 + 0.256178
recA NC_006156.1_132 recA proteinNC_006156.1 CDS126148 1089 - 0.349862
recB NC_006156.1_636 exodeoxyribonuclease V, beta chainNC_006156.1 CDS666939 3507 - 0.233248
recC NC_006156.1_637 exodeoxyribonuclease V, gamma chainNC_006156.1 CDS670451 3240 - 0.221605
recD NC_006156.1_635 exodeoxyribonuclease V, alpha chainNC_006156.1 CDS665110 1833 - 0.229133
recG NC_006156.1_581 DNA recombinaseNC_006156.1 CDS598464 2061 + 0.306162
recJ NC_006156.1_253 single-stranded-DNA-specific exonucleaseNC_006156.1 CDS262783 2127 + 0.253409
rep NC_006156.1_608 rep helicase, single-stranded DNA-dependent ATPaseNC_006156.1 CDS634430 1977 + 0.273141
rnhB NC_006156.1_45 ribonuclease HNC_006156.1 CDS45305 546 + 0.276557
ruvA NC_006156.1_23 Holliday junction DNA helicaseNC_006156.1 CDS22008 591 - 0.304569
ruvB NC_006156.1_22 Holliday junction DNA helicaseNC_006156.1 CDS20920 1044 - 0.341954
sbcC NC_006156.1_835 exonuclease SbcCNC_006156.1 CDS878369 2847 + 0.247278
sbcD NC_006156.1_834 exonuclease SbcDNC_006156.1 CDS877192 1191 + 0.27288
ssb NC_006156.1_114 single-stranded DNA-binding proteinNC_006156.1 CDS111718 450 - 0.3
topA NC_006156.1_832 DNA topoisomerase INC_006156.1 CDS874516 2550 - 0.28
ung NC_006156.1_51 uracil DNA glycosylaseNC_006156.1 CDS49182 672 + 0.28125
uvrA NC_006156.1_842 excinuclease ABC, subunit ANC_006156.1 CDS892277 2853 + 0.322818
uvrB NC_006156.1_841 excinuclease ABC, subunit BNC_006156.1 CDS890266 1995 + 0.305764
uvrC NC_006156.1_461 excinuclease ABC, subunit CNC_006156.1 CDS478587 1743 - 0.263913
uvrD NC_006156.1_340 DNA helicaseNC_006156.1 CDS350084 2097 - 0.260372