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2024-05-11 22:02:50

Gene list

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COG category: Replication, recombination and repair
Organism: Leptospira interrogans serovar lai str. 56601

Number of genes found: 228

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Leptospira interrogans serovar lai str. 56601
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA hypothetical proteinchromosome I CDS459302 582 - 0.333333
NA transposasechromosome I CDS3866398 1074 - 0.370577
NA transposasechromosome I CDS592733 1074 + 0.368715
NA conserved hypothetical proteinchromosome I CDS1278625 1233 + 0.36253
NA ADA regulatory proteinchromosome I CDS4226339 831 - 0.350181
NA modification methylasechromosome I CDS1545931 1095 - 0.357078
NA unknown proteinchromosome I CDS1132502 903 - 0.321152
NA hypothetical proteinchromosome I CDS2449064 552 + 0.291667
NA conserved hypothetical proteinchromosome I CDS2757491 306 - 0.398693
NA hypothetical proteinchromosome I CDS1561466 324 - 0.391975
NA conserved hypothetical proteinchromosome I CDS688127 921 - 0.396308
NA transposasechromosome I CDS3738864 300 + 0.383333
NA transposasechromosome I CDS739314 402 - 0.393035
NA transposasechromosome I CDS1738969 546 - 0.39011
NA transposasechromosome I CDS1011326 1074 + 0.368715
NA transposasechromosome I CDS711909 1074 + 0.368715
NA conserved hypothetical proteinchromosome I CDS846413 915 + 0.32459
NA conserved hypothetical proteinchromosome I CDS3162771 285 + 0.375439
NA hypothetical proteinchromosome I CDS3928076 711 + 0.367089
NA transposasechromosome I CDS3219293 747 + 0.350736
NA ATP-dependent RNA helicasechromosome I CDS4010598 2847 - 0.356164
NA transposasechromosome I CDS2501227 1074 + 0.368715
NA conserved hypothetical proteinchromosome I CDS686357 177 - 0.38983
NA putative lipoproteinchromosome I CDS1914832 198 - 0.343434
NA transposasechromosome I CDS1739925 849 + 0.367491
NA transposasechromosome I CDS3954536 1074 + 0.366853
NA hypothetical proteinchromosome I CDS1820108 366 + 0.308743
NA transcription-repair coupling factorchromosome I CDS2488914 3561 - 0.365066
NA transposasechromosome I CDS1739626 300 + 0.393333
NA ATP-dependent DNA helicasechromosome I CDS1848186 1977 - 0.372281
NA conserved hypothetical proteinchromosome I CDS1126519 840 - 0.346429
NA conserved hypothetical proteinchromosome I CDS3161119 1653 + 0.402299
NA transposasechromosome I CDS452072 1074 - 0.368715
NA hypothetical proteinchromosome I CDS4291300 636 + 0.327044
NA conserved hypothetical proteinchromosome I CDS2356025 351 - 0.324786
NA hypothetical proteinchromosome I CDS4000122 837 - 0.34767
NA MutT/nudix family proteinchromosome I CDS1086749 579 - 0.367876
NA putative helicasechromosome I CDS2068001 1905 + 0.362205
NA conserved hypothetical proteinchromosome I CDS687555 273 - 0.322344
NA ribonuclease HIIchromosome I CDS2359353 351 - 0.336182
NA Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvasechromosome I CDS1184812 1272 + 0.400943
NA transposasechromosome I CDS3567929 786 - 0.370229
NA unknown proteinchromosome I CDS3934973 921 + 0.400651
NA methylated-DNA--protein-cysteine methyltransferase-related proteinchromosome I CDS139659 414 - 0.347826
NA DNA alkylation repair enzyme-like proteinchromosome I CDS1133382 687 - 0.331878
NA conserved hypothetical proteinchromosome I CDS223749 1038 - 0.328516
NA transposasechromosome I CDS2884295 750 + 0.353333
NA conserved hypothetical proteinchromosome I CDS2969765 699 - 0.386266
NA hypothetical proteinchromosome I CDS3221488 396 - 0.424242
NA transposasechromosome I CDS1793875 300 - 0.386667
NA conserved hypothetical proteinchromosome I CDS4324190 495 - 0.383838
NA transposasechromosome I CDS2635172 300 + 0.39
NA conserved hypothetical proteinchromosome I CDS2277721 1110 + 0.327928
NA Single-stranded DNA-binding proteinchromosome I CDS1674693 453 + 0.408389
NA conserved hypothetical proteinchromosome I CDS3630866 321 + 0.305296
NA conserved hypothetical proteinchromosome I CDS1585193 528 + 0.367424
NA hypothetical proteinchromosome I CDS2182503 591 - 0.270728
NA transposasechromosome I CDS784005 1074 + 0.368715
NA conserved hypothetical proteinchromosome I CDS432131 546 + 0.333333
NA transposasechromosome I CDS4324681 300 - 0.386667
NA transposasechromosome I CDS2839514 1074 + 0.368715
NA ATP-dependent RNA helicasechromosome I CDS4024617 1566 + 0.386973
NA Single-strand binding proteinchromosome I CDS3599908 354 - 0.40113
NA DNA modification methylasechromosome I CDS2652828 1152 - 0.342882
NA SMF proteinchromosome I CDS3534058 984 - 0.368902
NA Integrase/recombinase xerDchromosome I CDS2456497 897 - 0.348941
NA transposasechromosome I CDS264684 1074 - 0.367784
NA purine NTPase, putativechromosome I CDS287046 2316 - 0.32513
NA unknown proteinchromosome I CDS2586566 1986 - 0.41289
NA transposasechromosome I CDS3849260 1074 + 0.368715
NA conserved hypothetical proteinchromosome I CDS1773218 336 + 0.366071
NA hypothetical proteinchromosome I CDS3869011 396 - 0.426768
NA transposasechromosome I CDS3673787 951 + 0.356467
NA hypothetical proteinchromosome I CDS1745655 2511 + 0.289128
NA ATP-dependent RNA helicasechromosome I CDS3394804 1623 - 0.378312
NA Putative methylasechromosome I CDS823908 567 + 0.347443
NA conserved hypothetical proteinchromosome I CDS4289152 303 - 0.316832
NA transposasechromosome I CDS2497026 1074 + 0.373371
NA conserved hypothetical proteinchromosome I CDS3200460 315 - 0.339683
NA putative outermembrane proteinchromosome I CDS2039412 831 - 0.392298
NA conserved hypothetical proteinchromosome I CDS2452685 1695 + 0.375811
NA unknown proteinchromosome I CDS1745026 633 + 0.319115
NA hypothetical proteinchromosome I CDS3183121 204 + 0.318627
NA transposasechromosome I CDS1560623 606 - 0.359736
NA Integrase core domain containing proteinchromosome I CDS1765453 804 - 0.365672
NA transposasechromosome I CDS3221037 483 - 0.362319
NA conserved hypothetical proteinchromosome I CDS2675470 1251 + 0.364508
NA transposasechromosome I CDS95097 1074 + 0.368715
NA hypothetical proteinchromosome I CDS806685 768 + 0.377604
NA transposasechromosome I CDS3148654 1074 - 0.368715
NA putative outermembrane proteinchromosome I CDS1129025 1035 - 0.332367
NA transposasechromosome I CDS1461209 1074 + 0.368715
NA unknown proteinchromosome I CDS1479829 729 + 0.341564
NA Probable integrase/recombinasechromosome I CDS390250 603 + 0.325041
NA conserved hypothetical proteinchromosome I CDS686537 765 - 0.32549
NA hypothetical proteinchromosome I CDS1059114 525 + 0.358095
NA hypothetical proteinchromosome I CDS475443 417 - 0.347722
NA transposasechromosome I CDS3928771 381 + 0.383202
NA hypothetical proteinchromosome I CDS2410388 462 - 0.400433
NA conserved hypothetical proteinchromosome I CDS2851461 1500 - 0.387333
NA transposasechromosome I CDS1235783 1074 - 0.367784
NA transposasechromosome I CDS3739163 849 + 0.372203
NA transposasechromosome I CDS2270606 1074 + 0.368715
NA DNA-3-methyladenine glycosidase I tagchromosome I CDS3795646 606 - 0.330033
NA Integrase core domain containing proteinchromosome I CDS2635468 852 + 0.370892
NA unknown proteinchromosome I CDS127279 435 - 0.390805
NA transposasechromosome I CDS302379 1074 + 0.365922
NA Integrase core domain containing proteinchromosome I CDS4323832 384 - 0.354167
NA transposasechromosome I CDS561278 1074 + 0.367784
NA transposasechromosome I CDS3794099 1074 + 0.369646
NA transposasechromosome I CDS3447711 468 + 0.410256
NA hypothetical proteinchromosome I CDS1818227 486 + 0.261317
NA transposasechromosome I CDS3290417 300 + 0.386667
NA Uracil-DNA glycosylasechromosome I CDS3850548 618 - 0.357605
NA transposasechromosome I CDS415451 1074 + 0.368715
NA transposasechromosome I CDS4043737 1074 + 0.367784
NA transposasechromosome I CDS3249393 381 - 0.367454
NA transposasechromosome I CDS3868659 384 - 0.361979
NA hypothetical proteinchromosome I CDS2258322 429 - 0.337995
NA transposasechromosome I CDS640696 1074 - 0.367784
NA Staphylococcal nuclease family proteinchromosome I CDS3675558 978 - 0.328221
NA hypothetical proteinchromosome I CDS3023605 360 - 0.380556
NA conserved hypothetical proteinchromosome I CDS289363 627 - 0.373206
NA transposasechromosome I CDS2464516 915 + 0.361749
NA MutT/nudix family proteinchromosome I CDS1582338 435 + 0.347126
NA DNA repair helicasechromosome I CDS2098231 1710 + 0.383041
NA conserved hypothetical proteinchromosome I CDS18259 1089 - 0.31405
NA Uracil-DNA glycosylasechromosome I CDS3619612 630 + 0.404762
NA transposasechromosome I CDS3220024 381 + 0.377953
NA hypothetical proteinchromosome I CDS374654 300 - 0.296667
NA transposasechromosome I CDS1442770 1074 - 0.368715
NA transposasechromosome I CDS3929476 1074 + 0.367784
NA transposasechromosome I CDS3447447 222 + 0.40991
NA unknown proteinchromosome I CDS895625 1632 + 0.35049
NA transposasechromosome I CDS3499305 1074 - 0.367784
NA Deoxyribodipyrimidine photolyasechromosome I CDS2632602 1551 - 0.337202
NA hypothetical proteinchromosome I CDS3023957 348 - 0.367816
NA transposasechromosome I CDS2709735 1074 - 0.368715
NA transposasechromosome I CDS3290716 849 + 0.371025
NA hypothetical proteinchromosome I CDS3567640 306 - 0.372549
NA Integrase core domain containing proteinchromosome I CDS3448175 414 + 0.381643
NA Integrase core domain containing proteinchromosome I CDS1793027 852 - 0.370892
NA transposasechromosome I CDS3249758 813 - 0.364084
NA unknown proteinchromosome I CDS3412500 957 - 0.355277
NA transposasechromosome I CDS2664384 300 + 0.383333
NA endonuclease IIIchromosome I CDS2130277 357 + 0.364146
NA transposasechromosome I CDS1354666 1074 + 0.367784
NA conserved hypothetical proteinchromosome I CDS3555756 606 + 0.412541
NA transposasechromosome I CDS3174371 1074 + 0.367784
NA DNA-3-methyladenine glycosylasechromosome I CDS275430 687 + 0.355167
NA transposasechromosome I CDS2664683 849 + 0.369847
NA transposasechromosome I CDS481684 1074 - 0.368715
NA conserved hypothetical proteinchromosome I CDS1857770 1518 - 0.343215
NA hypothetical proteinchromosome I CDS3718272 582 - 0.357388
NA transposasechromosome I CDS917182 417 - 0.417266
NA MutT/nudix family proteinchromosome I CDS4063746 672 + 0.361607
LB022 transposasechromosome II CDS18395 1074 + 0.365922
LB040 hypothetical proteinchromosome II CDS31361 267 - 0.299625
LB048 putative transposasechromosome II CDS37916 1074 + 0.368715
LB085 MutT/nudix family proteinchromosome II CDS75411 588 + 0.37585
LB122 site-specific integrase/recombinase XerD related proteinchromosome II CDS117169 900 - 0.355556
LB164 unknown protein confirmed by proteomicschromosome II CDS159124 372 - 0.330645
LB223 putative transposasechromosome II CDS217221 852 - 0.370892
LB224 putative transposasechromosome II CDS218069 306 - 0.385621
LB230 putative transposasechromosome II CDS226283 300 + 0.416667
LB231 putative transposasechromosome II CDS226579 846 + 0.382979
LB295 putative transposasechromosome II CDS294557 1074 + 0.366853
LB303 putative transposasechromosome II CDS301790 846 - 0.382979
LB304 putative transposasechromosome II CDS302632 306 - 0.415033
LB319 hypothetical proteinchromosome II CDS313463 912 + 0.328947
LB345 putative transposasechromosome II CDS334894 1074 - 0.364991
LB346 putative transposasechromosome II CDS336410 306 + 0.385621
devR fruiting body developmental protein R-like proteinchromosome I CDS3171685 840 + 0.477381
devS fruiting body developmental protein S-like proteinchromosome I CDS3172545 624 + 0.482372
dinP DNA damage-inducible proteinchromosome I CDS495409 1095 - 0.360731
dnaA chromosomal replication initiator proteinchromosome I CDS234 1332 + 0.315315
dnaB Replicative DNA helicase Bchromosome I CDS1675945 1329 + 0.411588
dnaC DNA replication protein Cchromosome I CDS3933429 858 - 0.397436
dnaE DNA polymerase III, subunit alphachromosome I CDS252765 3522 + 0.390403
dnaG DNA primasechromosome I CDS2211141 1797 + 0.375626
dnaN DNA polymerase III beta subunitchromosome I CDS3221 1122 + 0.321747
dnaX1 DNA polymerase III subunit gammachromosome I CDS4304597 1512 + 0.365079
dnaX2 DNA polymerase III subunits gamma and tauchromosome I CDS4331079 933 + 0.332262
dshA DshA proteinchromosome I CDS876052 1053 + 0.31529
exoA Exodeoxyribonucleasechromosome I CDS2494703 804 + 0.394279
gyrA1 DNA gyrase subunit Achromosome I CDS8564 2505 + 0.364471
gyrA2 DNA gyrase subunit Achromosome I CDS4161026 1389 + 0.367891
gyrB1 DNA gyrase subunit Bchromosome I CDS6626 1920 + 0.371875
gyrB2 DNA gyrase B subunitchromosome I CDS4162411 2136 + 0.373596
invA invasion-associated protein Achromosome I CDS3950471 489 - 0.376278
ligA DNA ligasechromosome I CDS4086408 2046 - 0.371945
mag1 DNA-3-methyladenine glycosylasechromosome I CDS1364293 642 - 0.361371
mutL DNA mismatch repair proteinchromosome I CDS1181483 1821 + 0.38056
mutS1 MutS proteinchromosome I CDS2115765 2547 - 0.346682
mutS2 DNA mismatch repair protein MutSchromosome I CDS2326843 369 - 0.368564
mutS3 MutS-like mismatch repair protein, ATPaseschromosome I CDS4208352 1833 - 0.332788
mutY A/G-specific DNA glycosylasechromosome I CDS2306429 1128 - 0.346631
pcrA1 ATP-dependent DNA helicase pcrAchromosome I CDS479892 1302 - 0.334101
pcrA2 ATP-dependent DNA helicase pcrAchromosome I CDS1087834 2025 + 0.379753
pcrA3 ATP-dependent DNA helicase pcrAchromosome I CDS2170218 2019 - 0.350173
pcrA4 ATP-dependent DNA helicase pcrAchromosome I CDS2292933 2199 - 0.365621
polA DNA polymerase Ichromosome I CDS3576611 2754 + 0.387073
priA Primosomal protein N'chromosome I CDS2365619 1944 - 0.365741
radC DNA repair protein radC homologchromosome I CDS1455981 699 + 0.412017
recA recA proteinchromosome I CDS2150850 1101 - 0.390554
recB exodeoxyribonuclease V, beta chainchromosome I CDS969823 3141 + 0.336835
recC exodeoxyribonuclease V, gamma chainchromosome I CDS966435 3399 + 0.343336
recD ATP-dependent exoDNAse, alpha subunitchromosome I CDS972945 1854 + 0.332255
recF RecF proteinchromosome I CDS5004 1098 + 0.306922
recG ATP-dependent DNA helicase recGchromosome I CDS3918427 2175 + 0.38069
recJ Single-stranded-DNA-specific exonuclease recJchromosome I CDS2976337 1932 + 0.373706
recN DNA repair protein RecNchromosome I CDS2299250 1707 - 0.391916
recO putative recombination protein Ochromosome I CDS1682988 783 + 0.378033
recQ1 DNA helicase RecQchromosome I CDS627888 1896 + 0.366561
recQ2 DNA helicase RecQchromosome I CDS964882 1449 - 0.343685
recR Recombination protein recRchromosome I CDS4306441 606 + 0.363036
rnhA ribonuclease H-like proteinchromosome I CDS1947579 390 - 0.4
ruvA Holliday junction DNA helicase ruvAchromosome I CDS2878308 639 - 0.320814
ruvB Holliday junction DNA helicase RuvB-like proteinchromosome I CDS815258 1026 + 0.398635
ruvC Holliday junction resolvasome endonuclease subunitchromosome I CDS743789 531 + 0.370998
tatD Putative deoxyribonuclease, tatD familychromosome I CDS4313561 810 - 0.332099
topA DNA topoisomerase Ichromosome I CDS1710779 1842 + 0.344734
uvrA Excinuclease ABC subunit Achromosome I CDS2191724 2847 + 0.392694
uvrB Excinuclease ABC subunit Bchromosome I CDS653581 2001 + 0.392304
uvrC excinuclease ABC, subunit Cchromosome I CDS2132062 1830 + 0.35082
xerC Integrase/recombinase xerCchromosome I CDS2323581 957 - 0.341693
xseA Probable exodeoxyribonuclease VII large subunitchromosome I CDS2332238 1269 + 0.382191
xseB Probable exodeoxyribonuclease VII small subunitchromosome I CDS2333508 288 + 0.333333