SGB - The Spirochetes Genome Browser - Gene list

Title

+ Borrelia afzelii, PKo

+ Borrelia burgdorferi ZS7, ZS7

+ Borrelia burgdorferi, B31

+ Borrelia duttonii Ly, Ly

+ Borrelia garinii High passage (300), PBi

+ Borrelia garinii, PBi

+ Borrelia hermsii DAH, DAH

+ Borrelia recurrentis A1, A1

+ Borrelia turicatae 91E135, 91E135

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)

+ Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)

+ Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197

+ Leptospira borgpetersenii serovar Hardjo-bovis L550, L550

+ Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

+ Leptospira interrogans serovar lai str. 56601

+ Treponema denticola ATCC 35405

+ Treponema pallidum

+ Treponema pallidum subsp. pallidum SS14, SS14

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

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+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

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+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

+ Alignments of whole reference and target genomic elements (DNA-based analysis)

Gene list

Applied filters:

COG category: Secondary metabolites biosynthesis, transport and catabolism
Organism: Borrelia garinii High passage (300), PBi

Number of genes found: 11

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Borrelia garinii High passage (300), PBi

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	NC_006156.1_477	conserved hypothetical integral membrane protein	NC_006156.1	CDS	494919	1359	+	0.285504
NA	NC_006156.1_754	ABC transporter, ATP-binding protein	NC_006156.1	CDS	799001	924	-	0.274892
NA	NC_006156.1_792	hypothetical protein	NC_006156.1	CDS	829490	1482	+	0.233468
NA	NC_006156.1_707	acyl carrier protein	NC_006156.1	CDS	742335	243	+	0.288066
NA	NC_006156.1_532	hypothetical protein	NC_006156.1	CDS	542953	1296	-	0.237654
NA	NC_006156.1_585	conserved hypothetical integral membrane protein	NC_006156.1	CDS	602962	1356	+	0.272124
NA	NC_006156.1_573	ABC transporter, ATP-binding protein	NC_006156.1	CDS	588149	807	+	0.275093
NA	NC_006156.1_583	MATE efflux family protein	NC_006156.1	CDS	601446	1338	+	0.280269
NA	NC_006156.1_741	conserved hypothetical protein	NC_006156.1	CDS	784024	678	-	0.246313
acrB	NC_006156.1_140	acriflavine resistance protein	NC_006156.1	CDS	138330	3213	-	0.293184
mtrC	NC_006156.1_141	membrane fusion protein	NC_006156.1	CDS	141561	954	-	0.307128